BLASTP 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman 
(1997), "Gapped BLAST and PSI-BLAST: a new generation of 
protein database search programs", Nucleic Acids Res. 25:3389-3402.

RID: 1145379797-30231-81504278318.BLASTQ4


Database: NCBI Protein Reference Sequences
           2,261,996 sequences; 815,640,044 total letters
 
If you have any problems or questions with the results of this search 
please refer to the BLAST FAQs
Taxonomy reports


Query=  
Length=934

                                                                   Score     E
Sequences producing significant alignments:                        (Bits)  Value

gi|4557761|ref|NP_000242.1|  mutS homolog 2 [Homo sapiens]         1775    0.0     
gi|73969550|ref|XP_538482.2|  PREDICTED: similar to DNA mismat...  1714    0.0     
gi|77736115|ref|NP_001029756.1|  hypothetical protein LOC533115 [  1698    0.0     
gi|6678938|ref|NP_032654.1|  mutS homolog 2 [Mus musculus]         1655    0.0     
gi|13591999|ref|NP_112320.1|  mismatch repair protein 2 [Rattus n  1643    0.0     
gi|73969552|ref|XP_864712.1|  PREDICTED: similar to DNA mismat...  1577    0.0     
gi|55595712|ref|XP_515459.1|  PREDICTED: hypothetical protein XP_  1365    0.0     
gi|68441231|ref|XP_702697.1|  PREDICTED: hypothetical protein XP_  1324    0.0     
gi|47087243|ref|NP_998689.1|  mutS homolog 2 [Danio rerio]         1317    0.0     
gi|72126137|ref|XP_794098.1|  PREDICTED: similar to DNA mismat...  1072    0.0     
gi|50739071|ref|XP_426110.1|  PREDICTED: similar to hypothetical    875    0.0     
gi|58259371|ref|XP_567098.1|  DNA mismatch repair protein MSH2...   778    0.0     
gi|71017883|ref|XP_759172.1|  hypothetical protein UM03025.1 [Ust   776    0.0     
gi|39973949|ref|XP_368365.1|  hypothetical protein MG00879.4 [Mag   775    0.0     
gi|85093179|ref|XP_959643.1|  DNA MISMATCH REPAIR PROTEIN MSH2...   770    0.0     
gi|91093785|ref|XP_967374.1|  PREDICTED: similar to DNA mismat...   761    0.0   
gi|76629180|ref|XP_593717.2|  PREDICTED: similar to DNA mismat...   759    0.0     
gi|70999834|ref|XP_754634.1|  DNA mismatch repair protein Msh2 [A   755    0.0     
gi|46123905|ref|XP_386506.1|  MSH2_NEUCR DNA mismatch repair p...   753    0.0     
gi|67537672|ref|XP_662610.1|  hypothetical protein AN5006.2 [Aspe   748    0.0     
gi|24584320|ref|NP_523565.2|  spellchecker1 CG4215-PA, isoform A    701    0.0     
gi|58392583|ref|XP_319476.2|  ENSANGP00000014300 [Anopheles gambi   690    0.0     
gi|45199121|ref|NP_986150.1|  AFR603Cp [Eremothecium gossypii]      681    0.0     
gi|66819479|ref|XP_643399.1|  DNA mismatch repair protein [Dictyo   669    0.0     
gi|57912709|ref|XP_554197.1|  ENSANGP00000028062 [Anopheles gambi   667    0.0     
gi|42565226|ref|NP_566804.3|  MSH2 (MUTS HOMOLOG 2); ATP bindi...   663    0.0     
gi|6324482|ref|NP_014551.1|  Protein that forms heterodimers, ...   662    0.0     
gi|50290307|ref|XP_447585.1|  hypothetical protein CAGL0I07733g [   651    0.0     
gi|63054752|ref|NP_595967.2|  hypothetical protein SPBC19G7.01...   625    2e-177  
gi|50554795|ref|XP_504806.1|  hypothetical protein [Yarrowia lipo   614    3e-174  
gi|50310365|ref|XP_455202.1|  unnamed protein product [Kluyveromy   611    3e-173  
gi|62471629|ref|NP_001014482.1|  spellchecker1 CG4215-PC, isoform   578    3e-163  
gi|68481114|ref|XP_715472.1|  hypothetical protein CaO19_10605...   497    6e-139  
gi|50405181|ref|YP_054273.1|  DNA mismatch repair protein Msh2...   471    5e-131  
gi|50428976|ref|XP_457639.1|  unnamed protein product [Debaryomyc   451    5e-125  
gi|71665822|ref|XP_819877.1|  DNA mismatch repair protein MSH2...   423    1e-116  
gi|71421366|ref|XP_811786.1|  DNA mismatch repair protein MSH2...   421    7e-116  
gi|71748512|ref|XP_823311.1|  DNA mismatch repair protein [Trypan   419    2e-115  
gi|23509476|ref|NP_702143.1|  DNA mismatch repair protein Msh2...   407    1e-111  
gi|17508445|ref|NP_491202.1|  MSH (MutS Homolog) family member...   400    1e-109  
gi|68076057|ref|XP_679948.1|  DNA mismatch repair protein [Plasmo   399    3e-109  
gi|82913509|ref|XP_728672.1|  hypothetical protein PY01096 [Pl...   396    1e-108  
gi|71032669|ref|XP_765976.1|  DNA mismatch repair protein MSH2...   381    5e-104  
gi|66361202|ref|XP_627287.1|  MutS like ABC ATpase involved in...   371    7e-101  
gi|67623531|ref|XP_668048.1|  MutS 2-related [Cryptosporidium hom   368    4e-100  
gi|84999170|ref|XP_954306.1|  DNA mismatch repair protein Msh2...   353    2e-95   
gi|82793333|ref|XP_727998.1|  DNA mismatch repair protein Msh2...   347    8e-94   
gi|67473640|ref|XP_652571.1|  DNA mismatch repair protein MSH2...   333    2e-89   
gi|50428111|ref|XP_457638.1|  hypothetical protein DEHA0B15983...   326    2e-87   
gi|70950501|ref|XP_744569.1|  DNA mismatch repair protein Msh2...   321    8e-86   
gi|72016851|ref|XP_785162.1|  PREDICTED: similar to DNA mismat...   309    2e-82   
gi|20089412|ref|NP_615487.1|  DNA mismatch repair protein [Methan   303    2e-80   
gi|89209977|ref|ZP_01188370.1|  MutS 1 protein [Halothermothrix o   303    2e-80 
gi|82500773|ref|ZP_00886171.1|  MutS 1 protein [Caldicellulosirup   301    7e-80 
gi|76796368|ref|ZP_00778731.1|  MutS 1 protein [Thermoanaerobacte   295    6e-78 
gi|89202593|ref|ZP_01181309.1|  MutS 1 protein [Bacillus cereus s   293    2e-77 
gi|20807804|ref|NP_622975.1|  DNA mismatch repair protein [The...   292    3e-77   
gi|73669015|ref|YP_305030.1|  DNA mismatch repair protein [Met...   291    5e-77   
gi|87310334|ref|ZP_01092464.1|  DNA mismatch repair protein [Blas   291    9e-77 
gi|21227785|ref|NP_633707.1|  DNA mismatch repair protein [Methan   289    3e-76   
gi|18310137|ref|NP_562071.1|  DNA mismatch repair protein [Clostr   288    4e-76   
gi|23099086|ref|NP_692552.1|  DNA mismatch repair protein [Oceano   288    6e-76   
gi|67916815|ref|ZP_00510508.1|  MutS 1 protein [Clostridium therm   287    1e-75 
gi|71541561|ref|ZP_00663303.1|  MutS 1 protein [Syntrophomonas wo   287    1e-75 
gi|16078767|ref|NP_389586.1|  DNA mismatch repair protein [Bac...   283    2e-74   
gi|49478366|ref|YP_037830.1|  DNA mismatch repair protein [Bac...   282    3e-74   
gi|52141719|ref|YP_085110.1|  DNA mismatch repair protein [Bacill   282    3e-74   
gi|47529195|ref|YP_020544.1|  DNA mismatch repair protein [Bac...   282    3e-74   
gi|65321095|ref|ZP_00394054.1|  COG0249: Mismatch repair ATPas...   282    3e-74 
gi|47568274|ref|ZP_00238977.1|  DNA mismatch repair protein MutS    282    3e-74 
gi|91205203|ref|YP_537558.1|  DNA mismatch repair protein MutS [R   282    4e-74 
gi|42782853|ref|NP_980100.1|  DNA mismatch repair protein [Bacill   282    4e-74   
gi|53731975|ref|ZP_00153447.2|  COG0249: Mismatch repair ATPas...   282    4e-74 
gi|91773655|ref|YP_566347.1|  DNA mismatch repair protein MutS...   281    7e-74 
gi|70994396|ref|XP_751995.1|  DNA mismatch repair protein Msh6 [A   281    7e-74   
gi|70726618|ref|YP_253532.1|  DNA mismatch repair protein [Sta...   281    9e-74   
gi|89208992|ref|ZP_01187464.1|  MutS 1 protein [Bacillus weihenst   280    1e-73 
gi|75760974|ref|ZP_00740980.1|  DNA mismatch repair protein mu...   280    1e-73 
gi|67939935|ref|ZP_00532415.1|  MutS 1 protein [Chlorobium phaeob   280    1e-73 
gi|76800921|ref|YP_325929.1|  DNA mismatch repair protein [Natron   280    2e-73   
gi|28210987|ref|NP_781931.1|  DNA mismatch repair protein [Clostr   279    3e-73   
gi|51892895|ref|YP_075586.1|  DNA mismatch repair protein [Sym...   278    5e-73   
gi|67458875|ref|YP_246499.1|  DNA mismatch repair protein [Ricket   278    6e-73   
gi|30021861|ref|NP_833492.1|  DNA mismatch repair protein [Bacill   278    6e-73   
gi|71282195|ref|YP_270792.1|  DNA mismatch repair protein [Colwel   277    1e-72   
gi|89100701|ref|ZP_01173557.1|  DNA mismatch repair protein [Baci   277    1e-72 
gi|15895112|ref|NP_348461.1|  DNA mismatch repair protein [Clo...   276    2e-72   
gi|76792442|ref|ZP_00774941.1|  MutS 1 protein [Pseudoalteromonas   276    3e-72 
gi|34580662|ref|ZP_00142142.1|  DNA mismatch repair protein MutS    275    5e-72 
gi|47095354|ref|ZP_00232964.1|  DNA mismatch repair protein Mu...   275    5e-72 
gi|67931584|ref|ZP_00524743.1|  MutS 1 protein [Solibacter usitat   275    5e-72 
gi|24380425|ref|NP_722380.1|  DNA mismatch repair protein [Strept   275    7e-72   
gi|52080310|ref|YP_079101.1|  DNA mismatch repair protein [Bacill   274    9e-72   
gi|15892324|ref|NP_360038.1|  DNA mismatch repair protein [Ricket   274    9e-72   
gi|57234006|ref|YP_181932.1|  DNA mismatch repair protein [Dehalo   274    9e-72   
gi|33152989|ref|NP_874342.1|  DNA mismatch repair protein [Haemop   274    9e-72   
gi|28899326|ref|NP_798931.1|  DNA mismatch repair protein [Vib...   274    9e-72   
gi|73748908|ref|YP_308147.1|  DNA mismatch repair protein [Dehalo   274    1e-71   
gi|52785686|ref|YP_091515.1|  DNA mismatch repair protein [Bacill   273    1e-71   
gi|56419841|ref|YP_147159.1|  DNA mismatch repair protein [Geobac   273    2e-71   
gi|66827461|ref|XP_647085.1|  DNA mismatch repair protein [Dictyo   273    2e-71   
gi|53729249|ref|ZP_00133779.2|  COG0249: Mismatch repair ATPas...   273    2e-71 
gi|52698708|ref|ZP_00340116.1|  COG0249: Mismatch repair ATPas...   273    2e-71 
gi|56963952|ref|YP_175683.1|  DNA mismatch repair protein [Bacill   272    4e-71   
gi|68560607|ref|ZP_00599919.1|  MutS 1 protein [Rubrobacter xylan   271    6e-71 
gi|19704028|ref|NP_603590.1|  DNA mismatch repair protein [Fus...   271    7e-71   
gi|15614932|ref|NP_243235.1|  DNA mismatch repair protein [Bacill   271    9e-71   
gi|16803443|ref|NP_464928.1|  DNA mismatch repair protein [Lister   270    1e-70   
gi|76786970|ref|YP_330630.1|  DNA mismatch repair protein [Str...   270    1e-70   
gi|22538235|ref|NP_689086.1|  DNA mismatch repair protein [Str...   270    1e-70   
gi|75854083|ref|ZP_00761802.1|  COG0249: Mismatch repair ATPase (   270    1e-70 
gi|81427976|ref|YP_394975.1|  DNA mismatch repair protein MutS...   270    2e-70   
gi|91227833|ref|ZP_01262006.1|  DNA mismatch repair protein [Vibr   270    2e-70 
gi|46907631|ref|YP_014020.1|  DNA mismatch repair protein [Lis...   270    2e-70   
gi|53715862|ref|YP_101854.1|  DNA mismatch repair protein [Bacter   269    3e-70   
gi|60683780|ref|YP_213924.1|  DNA mismatch repair protein [Bacter   269    3e-70   
gi|15640557|ref|NP_230186.1|  DNA mismatch repair protein [Vib...   269    4e-70   
gi|75825907|ref|ZP_00755342.1|  COG0249: Mismatch repair ATPas...   269    4e-70 
gi|27364957|ref|NP_760485.1|  DNA mismatch repair protein [Vibrio   268    5e-70   
gi|37680991|ref|NP_935600.1|  DNA mismatch repair protein [Vibrio   268    5e-70   
gi|88933293|ref|ZP_01138972.1|  MutS 1 protein [Dehalococcoides s   268    5e-70 
gi|55822041|ref|YP_140482.1|  DNA mismatch repair protein [Str...   267    1e-69   
gi|55820153|ref|YP_138595.1|  DNA mismatch repair protein [Str...   267    1e-69   
gi|77408124|ref|ZP_00784870.1|  DNA mismatch repair protein Mu...   267    1e-69 
gi|62528050|ref|ZP_00389310.1|  COG0249: Mismatch repair ATPas...   267    1e-69 
gi|55379190|ref|YP_137040.1|  DNA mismatch repair protein [Haloar   267    1e-69   
gi|78043130|ref|YP_360229.1|  DNA mismatch repair protein HexA...   267    1e-69   
gi|90580347|ref|ZP_01236154.1|  DNA mismatch repair protein [Vibr   267    1e-69 
gi|89090493|ref|ZP_01163540.1|  MutS 1 protein [Lactobacillus reu   267    1e-69 
gi|16800508|ref|NP_470776.1|  DNA mismatch repair protein [Lister   266    2e-69   
gi|57866808|ref|YP_188445.1|  DNA mismatch repair protein [Sta...   266    2e-69   
gi|75823717|ref|ZP_00753201.1|  COG0249: Mismatch repair ATPas...   266    2e-69 
gi|88944780|ref|ZP_01148004.1|  MutS 1 protein [Desulfotomaculum    266    2e-69 
gi|85712118|ref|ZP_01043171.1|  DNA mismatch repair protein [Idio   266    2e-69 
gi|88604449|ref|YP_504627.1|  DNA mismatch repair protein MutS...   266    3e-69   
gi|37524723|ref|NP_928067.1|  DNA mismatch repair protein [Pho...   266    3e-69   
gi|75819256|ref|ZP_00749345.1|  COG0249: Mismatch repair ATPas...   266    3e-69 
gi|91792565|ref|YP_562216.1|  DNA mismatch repair protein MutS...   265    4e-69 
gi|68249283|ref|YP_248395.1|  DNA mismatch repair protein [Haemop   265    4e-69   
gi|92089830|ref|ZP_01274757.1|  MutS 1 protein [Lactobacillus reu   265    4e-69 
gi|49483458|ref|YP_040682.1|  DNA mismatch repair protein [Sta...   265    5e-69   
gi|15926878|ref|NP_374411.1|  DNA mismatch repair protein [Sta...   265    7e-69   
gi|73662774|ref|YP_301555.1|  DNA mismatch repair protein [Sta...   265    7e-69   
gi|87160655|ref|YP_493885.1|  DNA mismatch repair protein mutS...   265    7e-69   
gi|28378884|ref|NP_785776.1|  DNA mismatch repair protein [Lactob   265    7e-69   
gi|23002388|ref|ZP_00046065.1|  COG0249: Mismatch repair ATPas...   265    7e-69 
gi|88858313|ref|ZP_01132955.1|  DNA mismatch repair protein [Pseu   265    7e-69 
gi|16272647|ref|NP_438865.1|  DNA mismatch repair protein [Haemop   264    1e-68   
gi|78485935|ref|YP_391860.1|  DNA mismatch repair protein MutS...   264    1e-68   
gi|89894338|ref|YP_517825.1|  hypothetical protein DSY1592 [Desul   264    1e-68   
gi|86146340|ref|ZP_01064664.1|  DNA mismatch repair protein [Vibr   264    1e-68 
gi|88195005|ref|YP_499805.1|  DNA mismatch repair protein MutS...   263    2e-68   
gi|82750895|ref|YP_416636.1|  DNA mismatch repair protein [Staphy   263    2e-68   
gi|42630971|ref|ZP_00156509.1|  COG0249: Mismatch repair ATPas...   263    2e-68 
gi|48871118|ref|ZP_00323834.1|  COG0249: Mismatch repair ATPas...   263    2e-68 
gi|84390123|ref|ZP_00991385.1|  DNA mismatch repair protein [Vibr   263    2e-68 
gi|42518561|ref|NP_964491.1|  DNA mismatch repair protein [Lactob   263    2e-68   
gi|90962103|ref|YP_536019.1|  DNA mismatch repair protein [Lac...   263    3e-68 
gi|68551067|ref|ZP_00590496.1|  MutS 1 protein [Pelodictyon phaeo   263    3e-68 
gi|68546875|ref|ZP_00586419.1|  MutS 1 protein [Shewanella amazon   263    3e-68 
gi|68208696|ref|ZP_00560793.1|  MutS 1 protein [Desulfitobacteriu   262    4e-68 
gi|46155973|ref|ZP_00133579.2|  COG0249: Mismatch repair ATPas...   262    4e-68 
gi|23467513|ref|ZP_00123094.1|  COG0249: Mismatch repair ATPas...   262    4e-68 
gi|77684057|ref|ZP_00799496.1|  MutS 1 protein [Alkaliphilus meta   262    4e-68 
gi|68056087|ref|ZP_00540221.1|  MutS 1 protein [Exiguobacterium s   262    4e-68 
gi|15903929|ref|NP_359479.1|  DNA mismatch repair protein [Strept   261    6e-68   
gi|67941865|ref|ZP_00533853.1|  DNA mismatch repair protein Mu...   261    6e-68 
gi|59711141|ref|YP_203917.1|  DNA mismatch repair protein [Vibrio   261    8e-68   
gi|89075067|ref|ZP_01161508.1|  DNA mismatch repair protein [Phot   261    8e-68 
gi|75428413|ref|ZP_00731683.1|  mutS-like ATPases involved in ...   261    8e-68 
gi|48853484|ref|ZP_00307654.1|  COG0249: Mismatch repair ATPas...   261    1e-67 
gi|46446855|ref|YP_008220.1|  DNA mismatch repair protein [Can...   261    1e-67   
gi|29377617|ref|NP_816771.1|  DNA mismatch repair protein [Entero   261    1e-67   
gi|29654365|ref|NP_820057.1|  DNA mismatch repair protein [Coxiel   261    1e-67   
gi|90412105|ref|ZP_01220112.1|  DNA mismatch repair protein [Phot   261    1e-67 
gi|62515839|ref|ZP_00387220.1|  COG0249: Mismatch repair ATPas...   260    1e-67 
gi|69248279|ref|ZP_00604703.1|  MutS 1 protein [Enterococcus faec   260    2e-67 
gi|34763050|ref|ZP_00144024.1|  DNA mismatch repair protein mu...   260    2e-67 
gi|39996921|ref|NP_952872.1|  DNA mismatch repair protein [Geobac   260    2e-67   
gi|83589961|ref|YP_429970.1|  DNA mismatch repair protein MutS...   260    2e-67   
gi|51473494|ref|YP_067251.1|  DNA mismatch repair protein [Ricket   259    2e-67   
gi|62464749|ref|ZP_00384035.1|  COG0249: Mismatch repair ATPas...   259    2e-67 
gi|78189282|ref|YP_379620.1|  DNA mismatch repair protein [Chloro   259    3e-67   
gi|19746989|ref|NP_608125.1|  DNA mismatch repair protein [Strept   259    3e-67   
gi|88948438|ref|ZP_01151201.1|  MutS 1 protein [Halorhodospira ha   259    3e-67 
gi|15603695|ref|NP_246769.1|  DNA mismatch repair protein [Pas...   259    4e-67   
gi|76800771|ref|YP_325779.1|  DNA mismatch repair protein [Natron   259    4e-67   
gi|46128895|ref|ZP_00154530.2|  COG0249: Mismatch repair ATPas...   259    4e-67 
gi|69953330|ref|ZP_00640497.1|  MutS 1 protein [Shewanella frigid   258    5e-67 
gi|50915171|ref|YP_061143.1|  DNA mismatch repair protein [Strept   258    6e-67   
gi|51244692|ref|YP_064576.1|  DNA mismatch repair protein [Desulf   258    8e-67   
gi|15789477|ref|NP_279301.1|  DNA mismatch repair protein [Haloba   258    8e-67   
gi|88951707|ref|ZP_01154184.1|  MutS 1 protein [Methanosaeta ther   258    8e-67 
gi|15674192|ref|NP_268367.1|  DNA mismatch repair protein [Lac...   257    1e-66   
gi|69256090|ref|ZP_00605705.1|  MutS 1 protein [Magnetococcus sp.   257    1e-66 
gi|71904476|ref|YP_281279.1|  DNA mismatch repair protein [Strept   257    1e-66   
gi|29348530|ref|NP_812033.1|  DNA mismatch repair protein [Bac...   257    1e-66   
gi|90020903|ref|YP_526730.1|  DNA mismatch repair protein MutS...   257    1e-66   
gi|54310168|ref|YP_131188.1|  DNA mismatch repair protein [Photob   257    1e-66   
gi|15789484|ref|NP_279308.1|  DNA mismatch repair protein [Haloba   257    1e-66   
gi|46580059|ref|YP_010867.1|  DNA mismatch repair protein [Des...   257    1e-66   
gi|21911342|ref|NP_665610.1|  DNA mismatch repair protein [Str...   257    1e-66   
gi|15675890|ref|NP_270064.1|  DNA mismatch repair protein [Str...   256    2e-66   
gi|56808552|ref|ZP_00366286.1|  COG0249: Mismatch repair ATPas...   256    2e-66 
gi|90408946|ref|ZP_01217080.1|  DNA mismatch repair protein [Psyc   256    2e-66 
gi|81177192|ref|ZP_00876055.1|  MutS 1 protein [Streptococcus sui   256    2e-66 
gi|56459853|ref|YP_155134.1|  DNA mismatch repair protein [Idioma   256    2e-66   
gi|16330413|ref|NP_441141.1|  DNA mismatch repair protein [Synech   256    2e-66   
gi|83815782|ref|YP_445727.1|  DNA mismatch repair protein MutS [S   256    3e-66   
gi|78685827|ref|ZP_00850602.1|  MutS 1 protein [Shewanella sp. AN   256    3e-66 
gi|78365764|ref|ZP_00836049.1|  MutS 1 protein [Shewanella sp. PV   256    3e-66 
gi|50119993|ref|YP_049160.1|  DNA mismatch repair protein [Erw...   255    4e-66   
gi|82498372|ref|ZP_00883873.1|  MutS 1 protein [Shewanella sp. MR   255    4e-66 
gi|58584515|ref|YP_198088.1|  DNA mismatch repair protein [Wol...   255    5e-66   
gi|19173014|ref|NP_597565.1|  DNA MISMATCH REPAIR PROTEIN [Enceph   254    7e-66   
gi|78357019|ref|YP_388468.1|  DNA mismatch repair protein MutS...   254    7e-66   
gi|24374941|ref|NP_718984.1|  DNA mismatch repair protein [Shewan   254    7e-66   
gi|88813098|ref|ZP_01128339.1|  DNA mismatch repair protein [Nitr   254    7e-66 
gi|52426299|ref|YP_089436.1|  DNA mismatch repair protein [Man...   254    1e-65   
gi|78691428|ref|ZP_00856045.1|  MutS 1 protein [Shewanella sp. MR   254    1e-65 
gi|85709591|ref|ZP_01040656.1|  DNA mismatch repair protein [Eryt   254    1e-65 
gi|88608613|ref|YP_506224.1|  DNA mismatch repair protein MutS...   253    2e-65   
gi|52842032|ref|YP_095831.1|  DNA mismatch repair protein [Leg...   253    2e-65   
gi|56414858|ref|YP_151933.1|  DNA mismatch repair protein [Sal...   253    2e-65   
gi|58336745|ref|YP_193330.1|  DNA mismatch repair protein [Lactob   253    2e-65   
gi|16766215|ref|NP_461830.1|  DNA mismatch repair protein [Sal...   253    2e-65   
gi|32474719|ref|NP_867713.1|  DNA mismatch repair protein [Rhodop   253    2e-65   
gi|45201212|ref|NP_986782.1|  AGR116Wp [Eremothecium gossypii]      253    3e-65   
gi|15832843|ref|NP_311616.1|  DNA mismatch repair protein [Escher   253    3e-65   
gi|24114026|ref|NP_708536.1|  DNA mismatch repair protein [Shi...   253    3e-65   
gi|91212095|ref|YP_542081.1|  DNA mismatch repair protein MutS [E   253    3e-65 
gi|26249133|ref|NP_755173.1|  DNA mismatch repair protein [Escher   253    3e-65   
gi|77919111|ref|YP_356926.1|  DNA mismatch repair protein MutS...   253    3e-65   
gi|74313299|ref|YP_311718.1|  methyl-directed mismatch repair [Sh   253    3e-65   
gi|27904861|ref|NP_777987.1|  DNA mismatch repair protein [Buc...   253    3e-65   
gi|68543405|ref|ZP_00583111.1|  MutS 1 protein [Shewanella baltic   253    3e-65 
gi|75512357|ref|ZP_00734909.1|  COG0249: Mismatch repair ATPas...   253    3e-65 
gi|75256935|ref|ZP_00728511.1|  COG0249: Mismatch repair ATPas...   253    3e-65 
gi|75241878|ref|ZP_00725697.1|  COG0249: Mismatch repair ATPas...   253    3e-65 
gi|75187457|ref|ZP_00700724.1|  COG0249: Mismatch repair ATPas...   253    3e-65 
gi|53805175|ref|YP_113095.1|  DNA mismatch repair protein [Met...   252    3e-65   
gi|15604167|ref|NP_220682.1|  DNA mismatch repair protein [Ric...   252    3e-65   
gi|77164436|ref|YP_342961.1|  DNA mismatch repair protein [Nitros   252    3e-65   
gi|62185403|ref|YP_220188.1|  DNA mismatch repair protein [Chlamy   252    3e-65   
gi|89092115|ref|ZP_01165070.1|  DNA mismatch repair protein [Ocea   252    3e-65 
gi|62514426|ref|ZP_00385929.1|  COG0249: Mismatch repair ATPas...   252    3e-65 
gi|54297717|ref|YP_124086.1|  DNA mismatch repair protein [Legion   252    5e-65   
gi|86610157|ref|YP_478919.1|  DNA mismatch repair protein MutS...   252    5e-65   
gi|85859743|ref|YP_461945.1|  DNA mismatch repair protein [Syntro   252    5e-65   
gi|51595128|ref|YP_069319.1|  DNA mismatch repair protein [Yer...   251    6e-65   
gi|77815263|ref|ZP_00814501.1|  MutS 1 protein [Shewanella put...   251    6e-65 
gi|22124746|ref|NP_668169.1|  DNA mismatch repair protein [Yer...   251    8e-65   
gi|54294692|ref|YP_127107.1|  DNA mismatch repair protein [Legion   251    1e-64   
gi|15644466|ref|NP_229518.1|  DNA mismatch repair protein [Thermo   251    1e-64   
gi|82545194|ref|YP_409141.1|  methyl-directed mismatch repair [Sh   251    1e-64   
gi|75176405|ref|ZP_00696549.1|  COG0249: Mismatch repair ATPas...   251    1e-64 
gi|71481590|ref|ZP_00661296.1|  MutS 1 protein [Prosthecochloris    251    1e-64 
gi|89109520|ref|AP_003300.1|  methyl-directed mismatch repair ...   250    1e-64 
gi|86606675|ref|YP_475438.1|  DNA mismatch repair protein MutS [S   250    1e-64   
gi|82778101|ref|YP_404450.1|  methyl-directed mismatch repair [Sh   250    1e-64   
gi|15803252|ref|NP_289284.1|  DNA mismatch repair protein [Escher   250    1e-64   
gi|77976003|ref|ZP_00831536.1|  COG0249: Mismatch repair ATPas...   250    1e-64 
gi|87122440|ref|ZP_01078320.1|  DNA mismatch repair protein MutS    250    1e-64 
gi|75196708|ref|ZP_00706778.1|  COG0249: Mismatch repair ATPas...   250    1e-64 
gi|78222636|ref|YP_384383.1|  DNA mismatch repair protein [Geobac   250    2e-64   
gi|68177783|ref|ZP_00550925.1|  MutS 1 protein [Desulfuromonas ac   250    2e-64 
gi|89897992|ref|YP_515102.1|  DNAmismatch repair ATPases [Chlamyd   249    2e-64   
gi|77958743|ref|ZP_00822772.1|  COG0249: Mismatch repair ATPas...   249    2e-64 
gi|83569900|ref|ZP_00921348.1|  COG0249: Mismatch repair ATPas...   249    2e-64 
gi|77359644|ref|YP_339219.1|  DNA mismatch repair protein [Pse...   249    3e-64   
gi|67918642|ref|ZP_00512237.1|  MutS 1 protein [Chlorobium limico   249    4e-64 
gi|29840586|ref|NP_829692.1|  DNA mismatch repair protein [Chlamy   248    5e-64   
gi|68552884|ref|ZP_00592268.1|  MutS 1 protein [Prosthecochloris    248    5e-64 
gi|75909393|ref|YP_323689.1|  DNA mismatch repair protein [Anabae   248    7e-64   
gi|21672681|ref|NP_660748.1|  DNA mismatch repair protein [Buc...   248    9e-64   
gi|34539964|ref|NP_904443.1|  DNA mismatch repair protein [Porphy   248    9e-64   
gi|88936627|ref|ZP_01142231.1|  MutS 1 protein [Geobacter uranium   247    1e-63 
gi|71674062|ref|ZP_00671810.1|  MutS 1 protein [Trichodesmium ery   247    1e-63 
gi|78780122|ref|YP_398234.1|  DNA mismatch repair protein MutS...   247    1e-63   
gi|77979635|ref|ZP_00835052.1|  COG0249: Mismatch repair ATPas...   247    1e-63 
gi|67156375|ref|ZP_00417968.1|  MutS 1 protein [Azotobacter vinel   246    2e-63 
gi|89889528|ref|ZP_01201039.1|  DNA  mismatch repair ATPase Mu...   246    2e-63 
gi|91775331|ref|YP_545087.1|  DNA mismatch repair protein MutS...   246    2e-63 
gi|82701803|ref|YP_411369.1|  DNA mismatch repair protein MutS...   246    2e-63   
gi|55379528|ref|YP_137378.1|  DNA mismatch repair protein [Haloar   246    3e-63   
gi|42523431|ref|NP_968811.1|  DNA mismatch repair protein [Bdello   246    3e-63   
gi|23023444|ref|ZP_00062680.1|  COG0249: Mismatch repair ATPas...   246    3e-63 
gi|19075844|ref|NP_588344.1|  hypothetical protein SPCC285.16c...   245    6e-63   
gi|56708538|ref|YP_170434.1|  DNA mismatch repair protein [Fra...   244    7e-63   
gi|91215167|ref|ZP_01252139.1|  DNA mismatch repair protein [Psyc   244    7e-63 
gi|78700043|ref|ZP_00864500.1|  MutS 1 protein [Alkalilimnicola e   244    7e-63 
gi|77962849|ref|ZP_00826665.1|  COG0249: Mismatch repair ATPas...   244    7e-63 
gi|86141815|ref|ZP_01060339.1|  putative DNA mismatch repair p...   244    7e-63 
gi|83856452|ref|ZP_00949981.1|  putative DNA mismatch repair p...   244    7e-63 
gi|15617028|ref|NP_240241.1|  DNA mismatch repair protein [Buc...   244    9e-63   
gi|46199262|ref|YP_004929.1|  DNA mismatch repair protein [Thermu   244    1e-62   
gi|55981293|ref|YP_144590.1|  DNA mismatch repair protein [Thermu   244    1e-62   
gi|50557004|ref|XP_505910.1|  hypothetical protein [Yarrowia lipo   243    2e-62   
gi|81301056|ref|YP_401264.1|  DNA mismatch repair protein MutS...   243    2e-62   
gi|21674323|ref|NP_662388.1|  DNA mismatch repair protein [Chloro   243    2e-62   
gi|90590541|ref|ZP_01246188.1|  MutS 1 protein [Flavobacterium jo   243    2e-62 
gi|84519042|ref|ZP_01006391.1|  DNA mismatch repair protein [P...   243    2e-62 
gi|56751860|ref|YP_172561.1|  DNA mismatch repair protein [Synech   243    2e-62   
gi|15605525|ref|NP_220311.1|  DNA mismatch repair protein [Chlamy   243    2e-62   
gi|67935674|ref|ZP_00528693.1|  MutS 1 protein [Chlorobium phaeob   243    3e-62 
gi|82746678|ref|ZP_00909182.1|  MutS 1 protein [Clostridium beije   243    3e-62 
gi|30249667|ref|NP_841737.1|  DNA mismatch repair protein [Nitros   241    6e-62   
gi|28871201|ref|NP_793820.1|  DNA mismatch repair protein [Pse...   241    6e-62   
gi|89255725|ref|YP_513086.1|  DNA mismatch repair protein MutS...   241    6e-62   
gi|74317177|ref|YP_314917.1|  MutS 1 protein [Thiobacillus denitr   241    8e-62   
gi|15639319|ref|NP_218768.1|  DNA mismatch repair protein [Tre...   241    8e-62   
gi|15598816|ref|NP_252310.1|  DNA mismatch repair protein [Pseudo   241    1e-61   
gi|76789534|ref|YP_328620.1|  DNA mismatch repair protein [Chlamy   241    1e-61   
gi|71738021|ref|YP_275945.1|  DNA mismatch repair protein MutS...   241    1e-61   
gi|22299783|ref|NP_683030.1|  DNA mismatch repair protein [The...   241    1e-61   
gi|46164334|ref|ZP_00137010.2|  COG0249: Mismatch repair ATPas...   241    1e-61 
gi|84319600|ref|ZP_00967994.1|  COG0249: Mismatch repair ATPas...   241    1e-61 
gi|77955371|ref|ZP_00819740.1|  MutS 1 protein [Marinobacter aqua   240    1e-61 
gi|85058509|ref|YP_454211.1|  DNA mismatch repair protein MutS...   240    2e-61   
gi|15834794|ref|NP_296553.1|  DNA mismatch repair protein [Chlamy   239    2e-61   
gi|76260566|ref|ZP_00768200.1|  MutS 1 protein [Chloroflexus aura   239    2e-61 
gi|71836860|ref|ZP_00676627.1|  MutS 1 protein [Pelobacter propio   239    2e-61 
gi|84500759|ref|ZP_00999008.1|  DNA mismatch repair protein [Ocea   239    2e-61 
gi|15605835|ref|NP_213212.1|  DNA mismatch repair protein [Aquife   239    3e-61   
gi|42520087|ref|NP_966002.1|  DNA mismatch repair protein [Wol...   239    3e-61   
gi|88705823|ref|ZP_01103532.1|  DNA mismatch repair protein MutS    239    3e-61 
gi|37520602|ref|NP_923979.1|  DNA mismatch repair protein [Gloeob   239    4e-61   
gi|88798289|ref|ZP_01113875.1|  DNA mismatch repair protein [Rein   239    4e-61 
gi|86134819|ref|ZP_01053401.1|  DNA mismatch repair protein [Tena   239    4e-61 
gi|84701865|ref|ZP_01016440.1|  DNA mismatch repair protein [Parv   239    4e-61 
gi|71901697|ref|ZP_00683772.1|  MutS 1 protein [Xylella fastidios   238    5e-61 
gi|28198974|ref|NP_779288.1|  DNA mismatch repair protein [Xylell   238    7e-61   
gi|84325686|ref|ZP_00973719.1|  COG0249: Mismatch repair ATPas...   238    7e-61 
gi|58616997|ref|YP_196196.1|  DNA mismatch repair protein [Ehrlic   238    9e-61   
gi|83647899|ref|YP_436334.1|  DNA mismatch repair protein MutS [H   237    1e-60   
gi|58578938|ref|YP_197150.1|  DNA mismatch repair protein [Ehr...   236    3e-60   
gi|34499116|ref|NP_903331.1|  DNA mismatch repair protein [Chr...   236    3e-60   
gi|42528103|ref|NP_973201.1|  DNA mismatch repair protein [Trepon   236    3e-60   
gi|33862201|ref|NP_893762.1|  DNA mismatch repair protein [Pro...   236    3e-60   
gi|23613078|ref|NP_703400.1|  DNA repair protein, putative [Plasm   235    6e-60   
gi|66044624|ref|YP_234465.1|  DNA mismatch repair protein [Pse...   235    6e-60   
gi|71550217|ref|ZP_00670353.1|  MutS 1 protein [Nitrosomonas eutr   235    6e-60 
gi|50761967|ref|XP_424897.1|  PREDICTED: similar to mutS homol...   234    8e-60   
gi|68299763|ref|NP_034959.2|  mutS homolog 3 [Mus musculus]         234    8e-60   
gi|88793787|ref|ZP_01109500.1|  DNA mismatch repair protein [A...   234    8e-60 
gi|50084669|ref|YP_046179.1|  DNA mismatch repair protein [Acinet   233    2e-59   
gi|67676252|ref|ZP_00473003.1|  MutS 1 protein [Chromohalobacter    233    2e-59 
gi|70987164|ref|XP_749062.1|  DNA mismatch repair protein Msh3 [A   233    2e-59   
gi|87123273|ref|ZP_01079124.1|  DNA mismatch repair protein MutS    233    2e-59 
gi|88658581|ref|YP_507620.1|  DNA mismatch repair protein MutS...   233    2e-59   
gi|71546399|ref|ZP_00667206.1|  MutS 1 protein [Syntrophobacter f   233    2e-59 
gi|15595142|ref|NP_212931.1|  DNA mismatch repair protein [Borrel   233    3e-59   
gi|78211633|ref|YP_380412.1|  DNA mismatch repair protein [Synech   233    3e-59   
gi|88801798|ref|ZP_01117326.1|  DNA mismatch repair protein [Pola   233    3e-59 
gi|68171124|ref|ZP_00544533.1|  MutS 1 protein [Ehrlichia chaffee   233    3e-59 
gi|56552803|ref|YP_163642.1|  DNA mismatch repair protein [Zym...   232    4e-59   
gi|58698275|ref|ZP_00373193.1|  DNA mismatch repair protein Mu...   232    5e-59 
gi|71898573|ref|ZP_00680744.1|  MutS 1 protein [Xylella fastid...   231    6e-59 
gi|83750712|ref|ZP_00947128.1|  COG0249: Mismatch repair ATPas...   231    6e-59 
gi|88803856|ref|ZP_01119376.1|  DNA mismatch repair protein [Robi   231    8e-59 
gi|69278633|ref|ZP_00613739.1|  MutS 1 protein [Mesorhizobium sp.   231    8e-59 
gi|33242306|ref|NP_877247.1|  DNA mismatch repair protein [Chl...   231    1e-58   
gi|88607128|ref|YP_505434.1|  DNA mismatch repair protein MutS [A   231    1e-58   
gi|72383081|ref|YP_292436.1|  DNA mismatch repair protein [Pro...   231    1e-58   
gi|73666889|ref|YP_302905.1|  DNA mismatch repair protein [Ehrlic   230    1e-58   
gi|15618850|ref|NP_225136.1|  DNA mismatch repair protein [Chlamy   230    1e-58   
gi|15838317|ref|NP_299005.1|  DNA mismatch repair protein [Xylell   230    1e-58   
gi|73952330|ref|XP_536307.2|  PREDICTED: similar to DNA mismat...   230    1e-58   
gi|33592656|ref|NP_880300.1|  DNA mismatch repair protein [Bordet   230    1e-58   
gi|86130732|ref|ZP_01049331.1|  DNA mismatch repair protein mutS    230    1e-58 
gi|88711010|ref|ZP_01105098.1|  DNA mismatch repair protein [F...   230    2e-58 
gi|70953875|ref|XP_746012.1|  DNA repair protein [Plasmodium chab   229    2e-58   
gi|70728591|ref|YP_258340.1|  DNA mismatch repair protein [Pseudo   229    3e-58   
gi|85375667|ref|YP_459729.1|  DNA mismatch repair ATPase [Erythro   229    4e-58   
gi|49474920|ref|YP_032961.1|  DNA mismatch repair protein [Bar...   229    4e-58   
gi|73970143|ref|XP_531814.2|  PREDICTED: similar to mutS homolog    229    4e-58   
gi|33600645|ref|NP_888205.1|  DNA mismatch repair protein [Bordet   229    4e-58   
gi|51599049|ref|YP_073237.1|  DNA mismatch repair protein [Borrel   228    5e-58   
gi|33596868|ref|NP_884511.1|  DNA mismatch repair protein [Bordet   228    5e-58   
gi|33241254|ref|NP_876196.1|  DNA mismatch repair protein [Pro...   228    5e-58   
gi|82737167|ref|ZP_00900019.1|  MutS 1 protein [Pseudomonas putid   228    5e-58 
gi|26988358|ref|NP_743783.1|  DNA mismatch repair protein [Pseudo   228    7e-58   
gi|87301627|ref|ZP_01084467.1|  DNA mismatch repair protein [Syne   228    7e-58 
gi|67922769|ref|ZP_00516270.1|  MutS 1 protein [Crocosphaera wats   228    9e-58 
gi|68538507|ref|ZP_00578284.1|  MutS 1 protein [Sphingopyxis alas   228    9e-58 
gi|56416649|ref|YP_153723.1|  DNA mismatch repair protein [Ana...   227    1e-57   
gi|68072659|ref|XP_678243.1|  DNA repair protein [Plasmodium berg   227    1e-57   
gi|90416734|ref|ZP_01224664.1|  DNA mismatch repair protein [m...   227    1e-57 
gi|56694939|ref|YP_165284.1|  DNA mismatch repair protein [Silici   226    3e-57   
gi|77457361|ref|YP_346866.1|  DNA mismatch repair protein [Pseudo   226    3e-57   
gi|89067434|ref|ZP_01154947.1|  DNA mismatch repair protein [Ocea   225    5e-57 
gi|69933041|ref|ZP_00628243.1|  MutS 1 protein [Paracoccus denitr   225    6e-57 
gi|71907966|ref|YP_285553.1|  DNA mismatch repair protein [Dechlo   224    8e-57   
gi|49473773|ref|YP_031815.1|  DNA mismatch repair protein [Barton   224    8e-57   
gi|33862352|ref|NP_893912.1|  DNA mismatch repair protein [Pro...   224    8e-57   
gi|27376035|ref|NP_767564.1|  DNA mismatch repair protein [Bradyr   224    1e-56   
gi|17545870|ref|NP_519272.1|  DNA mismatch repair protein [Ralsto   224    1e-56   
gi|83748240|ref|ZP_00945266.1|  MutS [Ralstonia solanacearum UW55   224    1e-56 
gi|66769341|ref|YP_244103.1|  DNA mismatch repair protein [Xan...   223    2e-56   
gi|21242056|ref|NP_641638.1|  DNA mismatch repair protein [Xan...   223    2e-56   
gi|84362223|ref|ZP_00986856.1|  COG0249: Mismatch repair ATPas...   223    2e-56 
gi|67542407|ref|ZP_00420343.1|  MutS 1 protein [Burkholderia viet   223    2e-56 
gi|17934261|ref|NP_531051.1|  DNA mismatch repair protein [Agr...   223    2e-56   
gi|50286559|ref|XP_445708.1|  unnamed protein product [Candida gl   223    2e-56   
gi|90421887|ref|YP_530257.1|  DNA mismatch repair protein MutS...   223    2e-56 
gi|15887696|ref|NP_353377.1|  DNA mismatch repair protein [Agr...   223    2e-56   
gi|83594870|ref|YP_428622.1|  MutS 1 protein [Rhodospirillum rubr   223    2e-56   
gi|67526583|ref|XP_661353.1|  hypothetical protein AN3749.2 [Aspe   223    3e-56   
gi|78046908|ref|YP_363083.1|  DNA mismatch repair protein [Xan...   222    4e-56   
gi|74017791|ref|ZP_00688414.1|  MutS 1 protein [Burkholderia ambi   222    4e-56 
gi|19114864|ref|NP_593952.1|  hypothetical protein SPAC8F11.03...   222    5e-56   
gi|85706903|ref|ZP_01037993.1|  DNA mismatch repair protein [Rose   222    5e-56 
gi|66819423|ref|XP_643371.1|  hypothetical protein DDB0217743 [Di   221    7e-56   
gi|39933589|ref|NP_945865.1|  DNA mismatch repair protein [Rhodop   221    7e-56   
gi|71032141|ref|XP_765712.1|  DNA repair protein [Theileria parva   221    7e-56   
gi|58581265|ref|YP_200281.1|  DNA mismatch repair protein [Xan...   220    2e-55   
gi|84623184|ref|YP_450556.1|  DNA mismatch repair protein [Xan...   220    2e-55   
gi|78066863|ref|YP_369632.1|  DNA mismatch repair protein [Burkho   219    3e-55   
gi|68555752|ref|ZP_00595096.1|  MutS 1 protein [Ralstonia metalli   219    3e-55 
gi|83950764|ref|ZP_00959497.1|  DNA mismatch repair protein [Rose   219    3e-55 
gi|33504503|ref|NP_878280.1|  mutS homolog 6 [Danio rerio]          219    4e-55   
gi|67666362|ref|ZP_00463611.1|  MutS 1 protein [Burkholderia ceno   219    4e-55 
gi|16124268|ref|NP_418832.1|  DNA mismatch repair protein [Caulob   218    6e-55   
gi|69299467|ref|ZP_00621454.1|  MutS 1 protein [Silicibacter sp.    218    6e-55 
gi|23016472|ref|ZP_00056227.1|  COG0249: Mismatch repair ATPas...   218    7e-55 
gi|84684657|ref|ZP_01012558.1|  DNA mismatch repair protein [R...   218    7e-55 
gi|87201305|ref|YP_498562.1|  DNA mismatch repair protein MutS...   218    1e-54   
gi|73540813|ref|YP_295333.1|  DNA mismatch repair protein [Ralsto   217    1e-54   
gi|83719722|ref|YP_442443.1|  DNA mismatch repair protein MutS...   217    1e-54   
gi|13474446|ref|NP_106014.1|  DNA mismatch repair protein [Mesorh   217    1e-54   
gi|86158123|ref|YP_464908.1|  DNA mismatch repair protein MutS...   216    3e-54   
gi|67656997|ref|ZP_00454377.1|  MutS 1 protein [Burkholderia ceno   216    3e-54 
gi|89052700|ref|YP_508151.1|  DNA mismatch repair protein MutS [J   216    4e-54   
gi|75674688|ref|YP_317109.1|  DNA mismatch repair protein [Nitrob   215    5e-54   
gi|47092692|ref|ZP_00230478.1|  DNA mismatch repair protein Mu...   215    5e-54 
gi|84355125|ref|ZP_00980015.1|  COG0249: Mismatch repair ATPas...   215    5e-54 
gi|78697310|ref|ZP_00861817.1|  MutS 1 protein [Bradyrhizobium sp   215    6e-54 
gi|86136767|ref|ZP_01055345.1|  DNA mismatch repair protein [Rose   215    6e-54 
gi|89360695|ref|ZP_01198513.1|  MutS 1 protein [Xanthobacter auto   214    8e-54 
gi|70918597|ref|XP_733250.1|  hypothetical protein PC301613.00...   214    1e-53   
gi|72016128|ref|XP_780878.1|  PREDICTED: similar to MutS prote...   214    1e-53   
gi|83371172|ref|ZP_00915993.1|  MutS 1 protein [Rhodobacter sphae   214    1e-53 
gi|56479127|ref|YP_160716.1|  DNA mismatch repair protein [Azoarc   213    2e-53   
gi|53723768|ref|YP_103293.1|  DNA mismatch repair protein [Burkho   213    2e-53   
gi|53719861|ref|YP_108847.1|  DNA mismatch repair protein [Burkho   213    2e-53   
gi|67634784|ref|ZP_00433750.1|  hypothetical protein Bmal10_02...   213    2e-53 
gi|69927786|ref|ZP_00624947.1|  MutS 1 protein [Nitrobacter hambu   213    2e-53 
gi|45657640|ref|YP_001726.1|  DNA mismatch repair protein [Lep...   213    2e-53   
gi|24214846|ref|NP_712327.1|  DNA mismatch repair protein [Lep...   213    2e-53   
gi|67762067|ref|ZP_00500771.1|  hypothetical protein BpseS_020...   213    2e-53 
gi|67670826|ref|ZP_00467624.1|  hypothetical protein Bpse1_020...   213    2e-53 
gi|67737178|ref|ZP_00487976.1|  COG0249: Mismatch repair ATPas...   213    2e-53 
gi|83953086|ref|ZP_00961808.1|  DNA mismatch repair protein [Sulf   213    2e-53 
gi|83679505|ref|ZP_00941218.1|  hypothetical protein Bpse4_020...   213    3e-53 
gi|76808909|ref|YP_334077.1|  DNA mismatch repair protein [Burkho   213    3e-53   
gi|67754325|ref|ZP_00493236.1|  hypothetical protein BpseP_020...   213    3e-53 
gi|82536709|ref|ZP_00895712.1|  hypothetical protein Bpse110_0...   212    4e-53 
gi|91784184|ref|YP_559390.1|  MutS 1 protein [Burkholderia xenovo   211    7e-53 
gi|17988084|ref|NP_540718.1|  DNA mismatch repair protein [Brucel   211    7e-53   
gi|82699062|ref|YP_413636.1|  DNA mismatch repair protein MutS...   211    7e-53   
gi|23501058|ref|NP_697185.1|  DNA mismatch repair protein [Brucel   211    7e-53   
gi|83942037|ref|ZP_00954499.1|  DNA mismatch repair protein [Sulf   211    7e-53 
gi|50416203|ref|XP_457536.1|  hypothetical protein DEHA0B13673...   211    9e-53   
gi|68388163|ref|XP_688406.1|  PREDICTED: similar to MutS protein    211    9e-53   
gi|6319935|ref|NP_010016.1|  Mismatch repair protein, forms di...   211    1e-52   
gi|85713673|ref|ZP_01044663.1|  MutS 1 protein [Nitrobacter sp. N   211    1e-52 
gi|15235223|ref|NP_192116.1|  MSH6 [Arabidopsis thaliana]           209    3e-52   
gi|83945036|ref|ZP_00957402.1|  DNA mismatch repair protein [Ocea   209    3e-52 
gi|83309386|ref|YP_419650.1|  Mismatch repair ATPase [Magnetospir   209    3e-52   
gi|86747654|ref|YP_484150.1|  DNA mismatch repair protein MutS...   209    4e-52   
gi|77464796|ref|YP_354300.1|  DNA mismatch repair protein [Rhodob   208    6e-52   
gi|15793265|ref|NP_283087.1|  DNA mismatch repair protein [Neisse   208    8e-52   
gi|83372339|ref|ZP_00917119.1|  MutS 1 protein [Rhodobacter sphae   208    8e-52 
gi|71362681|ref|ZP_00653832.1|  MutS 1 protein [Psychrobacter cry   207    1e-51 
gi|86356045|ref|YP_467937.1|  DNA mismatch repair protein [Rhizob   206    2e-51   
gi|59802243|ref|YP_208955.1|  DNA mismatch repair protein [Neisse   206    3e-51   
gi|15964148|ref|NP_384501.1|  DNA mismatch repair protein [Sinorh   206    4e-51   
gi|66877442|ref|ZP_00403004.1|  COG0249: Mismatch repair ATPas...   205    6e-51 
gi|67472182|ref|XP_651951.1|  mutS family protein [Entamoeba hist   204    1e-50   
gi|71073282|ref|XP_769190.1|  hypothetical protein GLP_21_3043...   204    1e-50   
gi|50543500|ref|XP_499916.1|  hypothetical protein [Yarrowia lipo   204    1e-50   
gi|15677973|ref|NP_275145.1|  DNA mismatch repair protein [Neisse   203    2e-50   
gi|89900620|ref|YP_523091.1|  DNA mismatch repair protein MutS...   202    3e-50   
gi|84514908|ref|ZP_01002271.1|  DNA mismatch repair protein [Lokt   202    4e-50 
gi|91771178|ref|ZP_01272992.1|  MutS 1 protein [Psychrobacter sp.   202    5e-50 
gi|58040303|ref|YP_192267.1|  DNA mismatch repair protein [Glucon   201    7e-50   
gi|90420552|ref|ZP_01228459.1|  DNA mismatch repair protein mutS    199    5e-49 
gi|84715910|ref|ZP_01022772.1|  MutS 1 protein [Polaromonas napht   199    5e-49 
gi|19114561|ref|NP_593649.1|  hypothetical protein SPAC23C11.1...   198    8e-49   
gi|91789193|ref|YP_550145.1|  DNA mismatch repair protein MutS [P   196    3e-48 
gi|50306133|ref|XP_453028.1|  unnamed protein product [Kluyveromy   196    3e-48   
gi|73960157|ref|XP_855503.1|  PREDICTED: similar to MutS protein    196    4e-48   
gi|67473543|ref|XP_652534.1|  DNA mismatch repair protein mutS...   195    7e-48   
gi|36949366|ref|NP_002431.2|  mutS homolog 4 [Homo sapiens]         194    1e-47   
gi|46203782|ref|ZP_00050988.2|  COG0249: Mismatch repair ATPas...   192    4e-47 
gi|55587372|ref|XP_524742.1|  PREDICTED: mutS homolog 4 [Pan trog   191    1e-46   
gi|68006638|ref|XP_670443.1|  hypothetical protein PB301144.00...   190    2e-46   
gi|77739324|ref|ZP_00807815.1|  DNA mismatch repair protein Mu...   190    2e-46 
gi|68483133|ref|XP_714501.1|  hypothetical protein CaO19.11091...   189    3e-46   
gi|45185367|ref|NP_983084.1|  ABR137Wp [Eremothecium gossypii]      188    8e-46   

Alignments

>gi|4557761|ref|NP_000242.1|  mutS homolog 2 [Homo sapiens]
Length=934

 Score = 1775 bits (4598),  Expect = 0.0
 Identities = 934/934 (100%), Positives = 934/934 (100%), Gaps = 0/934 (0%)

Query  1    MAVQPKETLQLESAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKT  60
            MAVQPKETLQLESAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKT
Sbjct  1    MAVQPKETLQLESAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKT  60

Query  61   QGVIKYMGPAGAKNLQSVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLA  120
            QGVIKYMGPAGAKNLQSVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLA
Sbjct  61   QGVIKYMGPAGAKNLQSVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLA  120

Query  121  YKASPGNLSQFEDILFGNNDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPD  180
            YKASPGNLSQFEDILFGNNDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPD
Sbjct  121  YKASPGNLSQFEDILFGNNDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPD  180

Query  181  NDQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQD  240
            NDQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQD
Sbjct  181  NDQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQD  240

Query  241  LNRLLKGKKGEQMNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYM  300
            LNRLLKGKKGEQMNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYM
Sbjct  241  LNRLLKGKKGEQMNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYM  300

Query  301  KLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERL  360
            KLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERL
Sbjct  301  KLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERL  360

Query  361  NLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQA  420
            NLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQA
Sbjct  361  NLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQA  420

Query  421  LEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSE  480
            LEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSE
Sbjct  421  LEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSE  480

Query  481  LREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFS  540
            LREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFS
Sbjct  481  LREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFS  540

Query  541  TVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLA  600
            TVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLA
Sbjct  541  TVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLA  600

Query  601  QLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYFEKD  660
            QLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYFEKD
Sbjct  601  QLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYFEKD  660

Query  661  KQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLK  720
            KQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLK
Sbjct  661  KQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLK  720

Query  721  GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMF  780
            GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMF
Sbjct  721  GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMF  780

Query  781  ATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKHV  840
            ATHFHELTALANQIPTVNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPKHV
Sbjct  781  ATHFHELTALANQIPTVNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPKHV  840

Query  841  IECAKQKALELEEFQYIGESQGYDIMEPAAKKCYLEREQGEKIIQEFLSKVKQMPFTEMS  900
            IECAKQKALELEEFQYIGESQGYDIMEPAAKKCYLEREQGEKIIQEFLSKVKQMPFTEMS
Sbjct  841  IECAKQKALELEEFQYIGESQGYDIMEPAAKKCYLEREQGEKIIQEFLSKVKQMPFTEMS  900

Query  901  EENITIKLKQLKAEVIAKNNSFVNEIISRIKVTT  934
            EENITIKLKQLKAEVIAKNNSFVNEIISRIKVTT
Sbjct  901  EENITIKLKQLKAEVIAKNNSFVNEIISRIKVTT  934


>gi|73969550|ref|XP_538482.2|  PREDICTED: similar to DNA mismatch repair protein Msh2 (MutS 
protein homolog 2) isoform 1 [Canis familiaris]
Length=934

 Score = 1714 bits (4439),  Expect = 0.0
 Identities = 898/934 (96%), Positives = 919/934 (98%), Gaps = 0/934 (0%)

Query  1    MAVQPKETLQLESAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKT  60
            MAVQPKETLQLESAAEVGFVRFFQ MPEKPTTTVRLFDRGDFYTAH EDALLAAREVFKT
Sbjct  1    MAVQPKETLQLESAAEVGFVRFFQAMPEKPTTTVRLFDRGDFYTAHHEDALLAAREVFKT  60

Query  61   QGVIKYMGPAGAKNLQSVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLA  120
            QGVIKY+GPAG K L+SVVLSKMNFESFVKDLLL+RQYRVEVYKNRAG+KASKENDWYLA
Sbjct  61   QGVIKYLGPAGTKTLESVVLSKMNFESFVKDLLLIRQYRVEVYKNRAGSKASKENDWYLA  120

Query  121  YKASPGNLSQFEDILFGNNDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPD  180
            +KASPGNLSQFEDILFGNNDMS SIGVVGVKMS VDGQRQVGVGYVDSIQRKLGLCEFPD
Sbjct  121  FKASPGNLSQFEDILFGNNDMSTSIGVVGVKMSTVDGQRQVGVGYVDSIQRKLGLCEFPD  180

Query  181  NDQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQD  240
            NDQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQ+IQRGGILITERK+ADF TKDIYQD
Sbjct  181  NDQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQVIQRGGILITERKRADFFTKDIYQD  240

Query  241  LNRLLKGKKGEQMNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYM  300
            LNRLLKGKKGEQ+NSAVLPEMENQVA S+LSAVIKFLELLSDDSNFGQ+ELTTFDFSQYM
Sbjct  241  LNRLLKGKKGEQVNSAVLPEMENQVAASALSAVIKFLELLSDDSNFGQYELTTFDFSQYM  300

Query  301  KLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERL  360
            KLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERL
Sbjct  301  KLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERL  360

Query  361  NLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQA  420
            NLVEAFVEDAELRQ+LQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVI+A
Sbjct  361  NLVEAFVEDAELRQSLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIRA  420

Query  421  LEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSE  480
            LEK+EGKHQ LLLAVFVTPL DLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSE
Sbjct  421  LEKYEGKHQGLLLAVFVTPLIDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSE  480

Query  481  LREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFS  540
            LREIM+DLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFS
Sbjct  481  LREIMDDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFS  540

Query  541  TVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLA  600
            TVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLA
Sbjct  541  TVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLA  600

Query  601  QLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYFEKD  660
            QLDAVVSFAHVSNGAPVPYVRP ILEKGQGRI LKASRHACVEVQDE+AFIPNDV+FEKD
Sbjct  601  QLDAVVSFAHVSNGAPVPYVRPVILEKGQGRITLKASRHACVEVQDEVAFIPNDVHFEKD  660

Query  661  KQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLK  720
            KQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLK
Sbjct  661  KQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLK  720

Query  721  GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMF  780
            GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMF
Sbjct  721  GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMF  780

Query  781  ATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKHV  840
            ATHFHELTALANQIPTVNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFP+HV
Sbjct  781  ATHFHELTALANQIPTVNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPRHV  840

Query  841  IECAKQKALELEEFQYIGESQGYDIMEPAAKKCYLEREQGEKIIQEFLSKVKQMPFTEMS  900
            IECAKQKALELEEFQ IG SQGYD MEPAAK+CYLEREQGEKIIQEFLSKVKQ+PFTEMS
Sbjct  841  IECAKQKALELEEFQNIGGSQGYDEMEPAAKRCYLEREQGEKIIQEFLSKVKQVPFTEMS  900

Query  901  EENITIKLKQLKAEVIAKNNSFVNEIISRIKVTT  934
            EENIT+KLKQLKAEVIAKNNSFVNEIISRIKV+T
Sbjct  901  EENITMKLKQLKAEVIAKNNSFVNEIISRIKVST  934


>gi|77736115|ref|NP_001029756.1|  hypothetical protein LOC533115 [Bos taurus]
Length=934

 Score = 1698 bits (4398),  Expect = 0.0
 Identities = 890/933 (95%), Positives = 914/933 (97%), Gaps = 0/933 (0%)

Query  1    MAVQPKETLQLESAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKT  60
            MAVQPK+TLQL+SAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAH EDALLAAREVFKT
Sbjct  1    MAVQPKDTLQLDSAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHREDALLAAREVFKT  60

Query  61   QGVIKYMGPAGAKNLQSVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLA  120
            QGV+KYMGPAGAK L+SVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLA
Sbjct  61   QGVVKYMGPAGAKTLESVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLA  120

Query  121  YKASPGNLSQFEDILFGNNDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPD  180
            +KASPGNLSQFEDILFGNNDMSASIGVVGVKMS VDGQRQVGVGYVDS QRKLGLCEFPD
Sbjct  121  FKASPGNLSQFEDILFGNNDMSASIGVVGVKMSTVDGQRQVGVGYVDSTQRKLGLCEFPD  180

Query  181  NDQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQD  240
            NDQFSNLEALLIQIGPKECV+PGGETAGDMGKLRQ+IQRGGILITERK+ADFSTKDIYQD
Sbjct  181  NDQFSNLEALLIQIGPKECVMPGGETAGDMGKLRQVIQRGGILITERKRADFSTKDIYQD  240

Query  241  LNRLLKGKKGEQMNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYM  300
            LNRLLKGKKGEQ+NSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYM
Sbjct  241  LNRLLKGKKGEQVNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYM  300

Query  301  KLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERL  360
            KLDIAAVRALNLFQGSVEDT+GSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERL
Sbjct  301  KLDIAAVRALNLFQGSVEDTSGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERL  360

Query  361  NLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQA  420
            NLVEAFVEDAELRQ LQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQA
Sbjct  361  NLVEAFVEDAELRQNLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQA  420

Query  421  LEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSE  480
            LEK+EGKHQ L LAVFVTPL DLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSE
Sbjct  421  LEKYEGKHQALFLAVFVTPLIDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSE  480

Query  481  LREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFS  540
            LREIM+DLEKKMQSTL+SAARDLGLDPGKQIKLDSS QFGYYFRVTCKEEKVLRNNKNFS
Sbjct  481  LREIMDDLEKKMQSTLVSAARDLGLDPGKQIKLDSSTQFGYYFRVTCKEEKVLRNNKNFS  540

Query  541  TVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLA  600
            TVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQ+AIVKEIVNISSGYVEPMQTLNDVLA
Sbjct  541  TVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQNAIVKEIVNISSGYVEPMQTLNDVLA  600

Query  601  QLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYFEKD  660
            QLDAVVSFAHVS+ APVPYVRP ILEKG+GRI LKASRHACVEVQDE+AFIPNDV+FEKD
Sbjct  601  QLDAVVSFAHVSDAAPVPYVRPVILEKGRGRITLKASRHACVEVQDEVAFIPNDVHFEKD  660

Query  661  KQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLK  720
            KQMFHIITGPNMGGKSTYIRQTGV+VLMAQIGCFVPCE AEVSIVDCILARVGAGDSQLK
Sbjct  661  KQMFHIITGPNMGGKSTYIRQTGVVVLMAQIGCFVPCEWAEVSIVDCILARVGAGDSQLK  720

Query  721  GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMF  780
            GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMF
Sbjct  721  GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMF  780

Query  781  ATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKHV  840
            ATHFHELTALANQIPTVNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFP+HV
Sbjct  781  ATHFHELTALANQIPTVNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPRHV  840

Query  841  IECAKQKALELEEFQYIGESQGYDIMEPAAKKCYLEREQGEKIIQEFLSKVKQMPFTEMS  900
            IECAKQKALELEEFQ IG+ Q  D MEPAAK+CYLEREQGEKIIQEFLSKVKQ+PFTEMS
Sbjct  841  IECAKQKALELEEFQNIGKPQECDEMEPAAKRCYLEREQGEKIIQEFLSKVKQVPFTEMS  900

Query  901  EENITIKLKQLKAEVIAKNNSFVNEIISRIKVT  933
            EE+IT KLKQLKAEVIAKNNSFVNEIISRIKVT
Sbjct  901  EESITRKLKQLKAEVIAKNNSFVNEIISRIKVT  933


>gi|6678938|ref|NP_032654.1|  mutS homolog 2 [Mus musculus]
Length=935

 Score = 1655 bits (4286),  Expect = 0.0
 Identities = 864/931 (92%), Positives = 901/931 (96%), Gaps = 0/931 (0%)

Query  1    MAVQPKETLQLESAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKT  60
            MAVQPKETLQLE AAE GFVRFF+GMPEKP+TTVRLFDRGDFYTAHGEDALLAAREVFKT
Sbjct  1    MAVQPKETLQLEGAAEAGFVRFFEGMPEKPSTTVRLFDRGDFYTAHGEDALLAAREVFKT  60

Query  61   QGVIKYMGPAGAKNLQSVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLA  120
            QGVIKYMGPAG+K LQSVVLSKMNFESFVKDLLLVRQYRVEVYKN+AGNKASKEN+WYLA
Sbjct  61   QGVIKYMGPAGSKTLQSVVLSKMNFESFVKDLLLVRQYRVEVYKNKAGNKASKENEWYLA  120

Query  121  YKASPGNLSQFEDILFGNNDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPD  180
            +KASPGNLSQFEDILFGNNDMSAS+GV+G+KM+ VDGQR VGVGYVDS QRKLGLCEFP+
Sbjct  121  FKASPGNLSQFEDILFGNNDMSASVGVMGIKMAVVDGQRHVGVGYVDSTQRKLGLCEFPE  180

Query  181  NDQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQD  240
            NDQFSNLEALLIQIGPKECVLPGGET GDMGKLRQ+IQRGGILITERK+ADFSTKDIYQD
Sbjct  181  NDQFSNLEALLIQIGPKECVLPGGETTGDMGKLRQVIQRGGILITERKRADFSTKDIYQD  240

Query  241  LNRLLKGKKGEQMNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYM  300
            LNRLLKGKKGEQ+NSA LPEMENQVAVSSLSAVIKFLELLSDDSNFGQFEL TFDFSQYM
Sbjct  241  LNRLLKGKKGEQINSAALPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELATFDFSQYM  300

Query  301  KLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERL  360
            KLD+AAVRALNLFQGSVEDTTGSQSLAALLNKCKT QGQRLVNQWIKQPLMD+NRIEERL
Sbjct  301  KLDMAAVRALNLFQGSVEDTTGSQSLAALLNKCKTAQGQRLVNQWIKQPLMDRNRIEERL  360

Query  361  NLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQA  420
            NLVEAFVED+ELRQ+LQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLP+VIQA
Sbjct  361  NLVEAFVEDSELRQSLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPSVIQA  420

Query  421  LEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSE  480
            LEK+EG+HQ LLLAVFVTPL DLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSE
Sbjct  421  LEKYEGRHQALLLAVFVTPLIDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSE  480

Query  481  LREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFS  540
            LRE+M+ LEKKMQSTLI+AAR LGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFS
Sbjct  481  LREVMDGLEKKMQSTLINAARGLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFS  540

Query  541  TVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLA  600
            TVDIQKNGVKFTNS+L+SLNEEYTKNK EYEEAQDAIVKEIVNISSGYVEPMQTLNDVLA
Sbjct  541  TVDIQKNGVKFTNSELSSLNEEYTKNKGEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLA  600

Query  601  QLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYFEKD  660
             LDA+VSFAHVSN APVPYVRP ILEKG+GRIILKASRHACVEVQDE+AFIPNDV+FEKD
Sbjct  601  HLDAIVSFAHVSNAAPVPYVRPVILEKGKGRIILKASRHACVEVQDEVAFIPNDVHFEKD  660

Query  661  KQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLK  720
            KQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLK
Sbjct  661  KQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLK  720

Query  721  GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMF  780
            GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAIS+YIATKIGAFCMF
Sbjct  721  GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISDYIATKIGAFCMF  780

Query  781  ATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKHV  840
            ATHFHELTALANQIPTVNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFP+HV
Sbjct  781  ATHFHELTALANQIPTVNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPRHV  840

Query  841  IECAKQKALELEEFQYIGESQGYDIMEPAAKKCYLEREQGEKIIQEFLSKVKQMPFTEMS  900
            I CAKQKALELEEFQ IG S G D  EPAAK+  LEREQGEKII EFLSKVKQ+PFT MS
Sbjct  841  IACAKQKALELEEFQNIGTSLGCDEAEPAAKRRCLEREQGEKIILEFLSKVKQVPFTAMS  900

Query  901  EENITIKLKQLKAEVIAKNNSFVNEIISRIK  931
            EE+I+ KLKQLKAEV+AKNNSFVNEIISRIK
Sbjct  901  EESISAKLKQLKAEVVAKNNSFVNEIISRIK  931


>gi|13591999|ref|NP_112320.1|  mismatch repair protein 2 [Rattus norvegicus]
Length=933

 Score = 1643 bits (4255),  Expect = 0.0
 Identities = 854/931 (91%), Positives = 899/931 (96%), Gaps = 0/931 (0%)

Query  1    MAVQPKETLQLESAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKT  60
            MAVQPKETLQLE AAEVGFVRFF+GMPEKP+TTV LFDRGDFYTAHGEDALLAAREVFKT
Sbjct  1    MAVQPKETLQLEGAAEVGFVRFFEGMPEKPSTTVGLFDRGDFYTAHGEDALLAAREVFKT  60

Query  61   QGVIKYMGPAGAKNLQSVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLA  120
            QGVIKYMGPAGAK LQ+VVLSKMNFESFVKDLLLVR YRVEVYKN+AGNKASKENDWYLA
Sbjct  61   QGVIKYMGPAGAKTLQTVVLSKMNFESFVKDLLLVRHYRVEVYKNKAGNKASKENDWYLA  120

Query  121  YKASPGNLSQFEDILFGNNDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPD  180
            YKASPGNLSQFEDILFGNNDM+ SIG++G+K+S VDGQRQVGVG VDS QRKLGLCEFPD
Sbjct  121  YKASPGNLSQFEDILFGNNDMATSIGIMGIKLSTVDGQRQVGVGDVDSTQRKLGLCEFPD  180

Query  181  NDQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQD  240
            NDQFSNLEALLIQIGPKEC+LPGGETAGDMGKLRQ+IQRGGILITERK+ DFSTKDIYQD
Sbjct  181  NDQFSNLEALLIQIGPKECILPGGETAGDMGKLRQVIQRGGILITERKRIDFSTKDIYQD  240

Query  241  LNRLLKGKKGEQMNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYM  300
            LNRLLKG+KGEQMNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFEL TFDFSQYM
Sbjct  241  LNRLLKGRKGEQMNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELATFDFSQYM  300

Query  301  KLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERL  360
            KLD+AAVRALNLFQGSVEDTTGSQSLAA LNKCKT QGQRLV+QWIKQPLMDKNRIEERL
Sbjct  301  KLDMAAVRALNLFQGSVEDTTGSQSLAAFLNKCKTAQGQRLVSQWIKQPLMDKNRIEERL  360

Query  361  NLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQA  420
            NLVEAFVED+ELR+ LQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQG+ QLPNVIQA
Sbjct  361  NLVEAFVEDSELRRALQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGVKQLPNVIQA  420

Query  421  LEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSE  480
            LEK++G+HQ LLLAVFVTPLTDLRSDFSKFQE IETTLDMDQVENHEFLVKPSFDPNLSE
Sbjct  421  LEKYQGRHQALLLAVFVTPLTDLRSDFSKFQEKIETTLDMDQVENHEFLVKPSFDPNLSE  480

Query  481  LREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFS  540
            LRE+M+ LEKKMQSTLISAAR LGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFS
Sbjct  481  LREVMDGLEKKMQSTLISAARGLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFS  540

Query  541  TVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLA  600
            TVDIQKNGVKFTNS+L+SLNEEYTKNK EYEEAQDAIVKEIVNISSGYVEPMQT+NDVLA
Sbjct  541  TVDIQKNGVKFTNSELSSLNEEYTKNKGEYEEAQDAIVKEIVNISSGYVEPMQTVNDVLA  600

Query  601  QLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYFEKD  660
             LDAVVSFAHVSN APVPYVRP ILEKG+GRII+KASRHACVEVQ ++AFIPNDV+FEKD
Sbjct  601  HLDAVVSFAHVSNAAPVPYVRPVILEKGKGRIIVKASRHACVEVQHDVAFIPNDVHFEKD  660

Query  661  KQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLK  720
            KQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLK
Sbjct  661  KQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLK  720

Query  721  GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMF  780
            GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIAT IGAFCMF
Sbjct  721  GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATNIGAFCMF  780

Query  781  ATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKHV  840
            ATHFHELTALA+QIPTVNNLHVTALTTEETLTMLYQVK GVCDQSFGIHVAELANFP+HV
Sbjct  781  ATHFHELTALASQIPTVNNLHVTALTTEETLTMLYQVKTGVCDQSFGIHVAELANFPRHV  840

Query  841  IECAKQKALELEEFQYIGESQGYDIMEPAAKKCYLEREQGEKIIQEFLSKVKQMPFTEMS  900
            IECAKQKALELEEFQ IG SQG+D  +PAAK+  LEREQGEKII EFLSKVKQ+PFT++S
Sbjct  841  IECAKQKALELEEFQSIGTSQGHDETQPAAKRRCLEREQGEKIILEFLSKVKQVPFTDLS  900

Query  901  EENITIKLKQLKAEVIAKNNSFVNEIISRIK  931
            EE++++KLKQLKAEV+AKNNSFVNEIISR+K
Sbjct  901  EESVSVKLKQLKAEVLAKNNSFVNEIISRVK  931


>gi|73969552|ref|XP_864712.1|  PREDICTED: similar to DNA mismatch repair protein Msh2 (MutS 
protein homolog 2) isoform 2 [Canis familiaris]
Length=975

 Score = 1577 bits (4084),  Expect = 0.0
 Identities = 859/999 (85%), Positives = 881/999 (88%), Gaps = 89/999 (8%)

Query  1    MAVQPKETLQLESAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKT  60
            MAVQPKETLQLESAAEVGFVRFFQ MPEKPTTTVRLFDRGDFYTAH EDALLAAREVFKT
Sbjct  1    MAVQPKETLQLESAAEVGFVRFFQAMPEKPTTTVRLFDRGDFYTAHHEDALLAAREVFKT  60

Query  61   QGVIKYMGPAGAKNLQSVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLA  120
            QGVIKY+GPAG K L+SVVLSKMNFESFVKDLLL+RQYRVEVYKNRAG+KASKENDWYLA
Sbjct  61   QGVIKYLGPAGTKTLESVVLSKMNFESFVKDLLLIRQYRVEVYKNRAGSKASKENDWYLA  120

Query  121  YKASPGNLSQFEDILFGNNDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPD  180
            +KASPGNLSQFEDILFGNNDMS SIGVVGVKMS VDGQRQVGVGYVDSIQRKLGLCEFPD
Sbjct  121  FKASPGNLSQFEDILFGNNDMSTSIGVVGVKMSTVDGQRQVGVGYVDSIQRKLGLCEFPD  180

Query  181  NDQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQD  240
            NDQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQ+IQRGGILITERK+ADF TKDIYQD
Sbjct  181  NDQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQVIQRGGILITERKRADFFTKDIYQD  240

Query  241  LNRLLKGKKGEQMNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYM  300
            LNRLLKGKKGEQ+NSAVLPEMENQVA S+LSAVIKFLELLSDDSNFGQ+ELTTFDFSQYM
Sbjct  241  LNRLLKGKKGEQVNSAVLPEMENQVAASALSAVIKFLELLSDDSNFGQYELTTFDFSQYM  300

Query  301  KLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERL  360
            KLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERL
Sbjct  301  KLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERL  360

Query  361  NLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQA  420
            NLVEAFVEDAELRQ+LQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVI+A
Sbjct  361  NLVEAFVEDAELRQSLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIRA  420

Query  421  LEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQ------------------  462
            LEK+EGKHQ LLLAVFVTPL DLRSDFSKFQEMIETTLDMDQ                  
Sbjct  421  LEKYEGKHQGLLLAVFVTPLIDLRSDFSKFQEMIETTLDMDQVFAMLLILWTPPPHSHPT  480

Query  463  ----------VENHEFLVKPSFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIK  512
                      VENHEFLVKPSFDPNLSELREIM+DLEKKMQSTLISAARDLGLDPGKQIK
Sbjct  481  RISGVMSCRRVENHEFLVKPSFDPNLSELREIMDDLEKKMQSTLISAARDLGLDPGKQIK  540

Query  513  LDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTN-------------------  553
            LDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTN                   
Sbjct  541  LDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNREPDVGLDPGCPHDLVIFN  600

Query  554  -------SKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLD---  603
                   SKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSG             Q +   
Sbjct  601  NIIILICSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGKFNRTNIERQRHRQKEKQA  660

Query  604  --------AVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDV  655
                    AVVSFAHVSNGAPVPYVRP ILEKGQGRI LKASRHACVEVQDE+AFIPNDV
Sbjct  661  PCREPDWYAVVSFAHVSNGAPVPYVRPVILEKGQGRITLKASRHACVEVQDEVAFIPNDV  720

Query  656  YFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAG  715
            +FEKDKQMFHIIT     GKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAG
Sbjct  721  HFEKDKQMFHIIT-----GKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAG  775

Query  716  DSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIG  775
            DSQ                   SATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIG
Sbjct  776  DSQ-------------------SATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIG  816

Query  776  AFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELAN  835
            AFCMFATHFHELTALANQIPTVNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELAN
Sbjct  817  AFCMFATHFHELTALANQIPTVNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELAN  876

Query  836  FPKHVIECAKQKALELEEFQYIGESQGYDIMEPAAKKCYLEREQGEKIIQEFLSKVKQMP  895
            FP+HVIECAKQKALELEEFQ IG SQGYD MEPAAK+CYLEREQGEKIIQEFLSKVKQ+P
Sbjct  877  FPRHVIECAKQKALELEEFQNIGGSQGYDEMEPAAKRCYLEREQGEKIIQEFLSKVKQVP  936

Query  896  FTEMSEENITIKLKQLKAEVIAKNNSFVNEIISRIKVTT  934
            FTEMSEENIT+KLKQLKAEVIAKNNSFVNEIISRIKV+T
Sbjct  937  FTEMSEENITMKLKQLKAEVIAKNNSFVNEIISRIKVST  975


>gi|55595712|ref|XP_515459.1|  PREDICTED: hypothetical protein XP_515459 [Pan troglodytes]
Length=794

 Score = 1365 bits (3532),  Expect = 0.0
 Identities = 752/934 (80%), Positives = 762/934 (81%), Gaps = 140/934 (14%)

Query  1    MAVQPKETLQLESAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKT  60
            MAVQPKETLQLESAAEVGFVRFFQG                                   
Sbjct  1    MAVQPKETLQLESAAEVGFVRFFQG-----------------------------------  25

Query  61   QGVIKYMGPAGAKNLQSVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLA  120
                       AKNLQSVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLA
Sbjct  26   -----------AKNLQSVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLA  74

Query  121  YKASPGNLSQFEDILFGNNDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPD  180
            YKASPGNLSQFEDILFGNNDMSASIGVVGVKMS VDGQRQVGVGYVDSIQRKLGLCEFPD
Sbjct  75   YKASPGNLSQFEDILFGNNDMSASIGVVGVKMSTVDGQRQVGVGYVDSIQRKLGLCEFPD  134

Query  181  NDQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQD  240
            NDQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQD
Sbjct  135  NDQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQD  194

Query  241  LNRLLKGKKGEQMNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYM  300
            LNRLLKGKKGEQMNSAVLPEMEN                                     
Sbjct  195  LNRLLKGKKGEQMNSAVLPEMEN-------------------------------------  217

Query  301  KLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERL  360
                         QGSVEDTTG QSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEER 
Sbjct  218  -------------QGSVEDTTGCQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERC  264

Query  361  NLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQA  420
             LV        +R +L+ DL       N+  K++     ++     LY            
Sbjct  265  TLV--------IRNSLK-DLCEVLKKQNKTKKQWHFAELSIA----LYH--------TDC  303

Query  421  LEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSE  480
             EK + KHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSE
Sbjct  304  KEKVKRKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSE  363

Query  481  LREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFS  540
            LREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFS
Sbjct  364  LREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFS  423

Query  541  TVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLA  600
            TVDIQKNGVKFTNS                           V +SSGYVEPMQTLNDVLA
Sbjct  424  TVDIQKNGVKFTNSHQVR-----------------------VKLSSGYVEPMQTLNDVLA  460

Query  601  QLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYFEKD  660
            QLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYFEKD
Sbjct  461  QLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYFEKD  520

Query  661  KQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLK  720
            KQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLK
Sbjct  521  KQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLK  580

Query  721  GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMF  780
            GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMF
Sbjct  581  GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMF  640

Query  781  ATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKHV  840
            ATHFHELTALANQIPTVNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPKHV
Sbjct  641  ATHFHELTALANQIPTVNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPKHV  700

Query  841  IECAKQKALELEEFQYIGESQGYDIMEPAAKKCYLEREQGEKIIQEFLSKVKQMPFTEMS  900
            IECAKQKALELEEFQYIGESQGYDIMEPAAKKCYLEREQGEKIIQEFLSKVKQMPFTEMS
Sbjct  701  IECAKQKALELEEFQYIGESQGYDIMEPAAKKCYLEREQGEKIIQEFLSKVKQMPFTEMS  760

Query  901  EENITIKLKQLKAEVIAKNNSFVNEIISRIKVTT  934
            EENITIKLKQLKAEVIAKNNSFVNEIISRIKVTT
Sbjct  761  EENITIKLKQLKAEVIAKNNSFVNEIISRIKVTT  794


>gi|68441231|ref|XP_702697.1|  PREDICTED: hypothetical protein XP_697605 [Danio rerio]
Length=936

 Score = 1324 bits (3426),  Expect = 0.0
 Identities = 677/935 (72%), Positives = 824/935 (88%), Gaps = 14/935 (1%)

Query  1    MAVQPKETLQLESAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKT  60
            MAVQPK+ L ++SA+E GF+ F+  M +KP TTVR+FDR D+YT HG+DA+ AA+EVFKT
Sbjct  1    MAVQPKQNLSMDSASEHGFLNFYFSMSDKPDTTVRVFDRNDYYTVHGKDAIFAAKEVFKT  60

Query  61   QGVIKYMGPAGAKNLQSVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLA  120
             GVIK +G +G + L+SVVLSKMNFESFV+DLLLVRQYRVEVYKN   +K+SKE+DW +A
Sbjct  61   NGVIKNLG-SGNRRLESVVLSKMNFESFVRDLLLVRQYRVEVYKN--ASKSSKEHDWQIA  117

Query  121  YKASPGNLSQFEDILFGNNDMSA--SIGVVGVKM-SAVDGQRQVGVGYVDSIQRKLGLCE  177
            +KASPGNL+QFE+ILFG+    A  ++GVVGV++ +  DGQR VGVGYVDS  RKLG+CE
Sbjct  118  FKASPGNLTQFEEILFGSGGGPAEGAVGVVGVRLGTGTDGQRVVGVGYVDSTLRKLGVCE  177

Query  178  FPDNDQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQIIQRGGILITERKKADFSTKDI  237
            FPDNDQFSNLEALL+QIGPKECVLP G++ GD+GKL+Q++QRGGIL+T+RKK++F+TKDI
Sbjct  178  FPDNDQFSNLEALLVQIGPKECVLPAGDSGGDLGKLKQVVQRGGILLTDRKKSEFTTKDI  237

Query  238  YQDLNRLLKGKKGEQMNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFS  297
             QDLNRLLK +KGE ++SA LPEME ++A+S L AVIK+LELL+D++NFG F++TTFD +
Sbjct  238  VQDLNRLLKARKGETVSSAALPEMEKKIAMSCLEAVIKYLELLADEANFGSFKMTTFDLN  297

Query  298  QYMKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIE  357
            QYM+LD AAV+ALNLFQGS +D TG+ SLA LLNKC+TPQGQRLVNQWIKQPL+DKN+IE
Sbjct  298  QYMRLDNAAVQALNLFQGSSDDATGTHSLAGLLNKCRTPQGQRLVNQWIKQPLIDKNKIE  357

Query  358  ERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNV  417
            ERL+LVE FVED+ELR++ QEDLLRRFPDLNR+AKKFQRQ++NLQDCYR+YQ + QLPNV
Sbjct  358  ERLDLVETFVEDSELRKSCQEDLLRRFPDLNRMAKKFQRQSSNLQDCYRVYQSVGQLPNV  417

Query  418  IQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPN  477
            + ALE++ GKHQ LL A F++PL DL SDFSKFQEMIETTLDM+QVE+HEFLVKPSFDP 
Sbjct  418  VLALERYSGKHQVLLHAAFISPLNDLISDFSKFQEMIETTLDMNQVEHHEFLVKPSFDPT  477

Query  478  LSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNK  537
            LS+LRE M+ LEK MQ+ L SAAR+LGL+  K +KL+S+AQ GY+FRVTCKEEK LRNNK
Sbjct  478  LSDLRENMDRLEKAMQAALSSAARELGLEAAKTVKLESNAQIGYFFRVTCKEEKSLRNNK  537

Query  538  NFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLND  597
             F+T+D+QKNGV+FTNSKL+SLNEEYTK++ EYEEAQ+AIVKEI++I++GYV+P+QTLN+
Sbjct  538  KFTTLDVQKNGVRFTNSKLSSLNEEYTKSREEYEEAQNAIVKEIISIAAGYVDPVQTLNE  597

Query  598  VLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYF  657
            V+AQLDAVVSFA VS+ APVP++RP ILEKG GR++LKA+RH CVE QDE+AFIPNDV F
Sbjct  598  VIAQLDAVVSFAVVSHAAPVPFIRPKILEKGSGRLVLKAARHPCVEAQDEVAFIPNDVTF  657

Query  658  EKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDS  717
             + ++MFHIITGPNMGGKSTYIRQ GVIVLMAQIGCFVPC+ AE+S+VDC+LARVGAGDS
Sbjct  658  IRGEKMFHIITGPNMGGKSTYIRQVGVIVLMAQIGCFVPCDEAELSVVDCVLARVGAGDS  717

Query  718  QLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAF  777
            Q+KGVSTFMAEMLETA+ILRSAT+DSLIIIDELGRGTSTYDGFGLAWAISEYIAT++ +F
Sbjct  718  QIKGVSTFMAEMLETAAILRSATEDSLIIIDELGRGTSTYDGFGLAWAISEYIATRLKSF  777

Query  778  CMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFP  837
            C+FATHFHELTALA Q+PTV NLHVTALTT+ TLTMLY+VKKGVCDQSFGIHVAELA+FP
Sbjct  778  CLFATHFHELTALAQQVPTVRNLHVTALTTDSTLTMLYKVKKGVCDQSFGIHVAELASFP  837

Query  838  KHVIECAKQKALELEEFQ---YIGESQGYDIMEPAAKKCYLEREQGEKIIQEFLSKVKQM  894
            KHVI  A++KALELEEFQ    +GE  G     P AKK  +E+++GEKII+ FL+KVK M
Sbjct  838  KHVIANAREKALELEEFQDISSVGEEAG-----PKAKKRCMEKQEGEKIIEAFLAKVKSM  892

Query  895  PFTEMSEENITIKLKQLKAEVIAKNNSFVNEIISR  929
            P   MS++ +  +L++LKAEVI++NNSFVNEI+SR
Sbjct  893  PVDGMSDKAVKEELRKLKAEVISQNNSFVNEIVSR  927


>gi|47087243|ref|NP_998689.1|  mutS homolog 2 [Danio rerio]
Length=936

 Score = 1317 bits (3408),  Expect = 0.0
 Identities = 673/935 (71%), Positives = 822/935 (87%), Gaps = 14/935 (1%)

Query  1    MAVQPKETLQLESAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKT  60
            MAVQPK+ L ++SA+E GF+ F+  M +KP TTVR+FDR D+YT HG+DA+ AA+EVFKT
Sbjct  1    MAVQPKQNLSMDSASEHGFLNFYFSMSDKPDTTVRVFDRNDYYTVHGKDAIFAAKEVFKT  60

Query  61   QGVIKYMGPAGAKNLQSVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLA  120
             GVIK +G +G + L+SVVLSKMNFESFV+DLLLVRQYRVEVYKN   +K+SKE+DW +A
Sbjct  61   NGVIKNLG-SGNRRLESVVLSKMNFESFVRDLLLVRQYRVEVYKN--ASKSSKEHDWQIA  117

Query  121  YKASPGNLSQFEDILFGNNDMSA--SIGVVGVKM-SAVDGQRQVGVGYVDSIQRKLGLCE  177
            +KASPGNL+QFE+ILFG+    A  ++GVVGV++ +  DGQR VGVGYVDS  RKLG+CE
Sbjct  118  FKASPGNLTQFEEILFGSGGGPAEGAVGVVGVRLGTGTDGQRVVGVGYVDSTLRKLGVCE  177

Query  178  FPDNDQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQIIQRGGILITERKKADFSTKDI  237
            FPDNDQFSNLEALL+QIGPKECVLP G++ GD GKL+Q++QRGGIL+T+RKK++F+TKDI
Sbjct  178  FPDNDQFSNLEALLVQIGPKECVLPAGDSGGDQGKLKQVVQRGGILLTDRKKSEFTTKDI  237

Query  238  YQDLNRLLKGKKGEQMNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFS  297
             QDLNRLLK +KGE ++SA LPEME ++A+S L AVIK+LELL+D++NFG F++TTFD +
Sbjct  238  VQDLNRLLKARKGETVSSAALPEMEKKIAMSCLEAVIKYLELLADEANFGSFKMTTFDLN  297

Query  298  QYMKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIE  357
            QYM+LD AAV+ALNLFQGS +D TG+ SLA LLNKC+TPQGQRLVNQWIKQPL+DKN+IE
Sbjct  298  QYMRLDNAAVQALNLFQGSSDDATGTHSLAGLLNKCRTPQGQRLVNQWIKQPLIDKNKIE  357

Query  358  ERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNV  417
            ERL+LVE FVED+ELR++ QEDLLRRFPDLNR+AKKFQRQ++NLQDCYR+YQ + QLPNV
Sbjct  358  ERLDLVETFVEDSELRKSCQEDLLRRFPDLNRMAKKFQRQSSNLQDCYRVYQSVGQLPNV  417

Query  418  IQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPN  477
            + ALE++ GKHQ LL A F++PL DL SDFSKFQEMIETTLDM+QVE+HEFLVKPSFDP 
Sbjct  418  VLALERYSGKHQVLLHAAFISPLNDLISDFSKFQEMIETTLDMNQVEHHEFLVKPSFDPT  477

Query  478  LSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNK  537
            LS+LRE M+ LEK MQ+ L SAAR+LGL+  K +KL+S+AQ GY+FRVTCKEEK LRNNK
Sbjct  478  LSDLRENMDRLEKAMQAALSSAARELGLEAAKTVKLESNAQIGYFFRVTCKEEKSLRNNK  537

Query  538  NFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLND  597
             F+T+D+QKNGV+FTNSKL+SLNEEYTK++ EYEEAQ+AIVKEI++I++GYV+P+QTLN+
Sbjct  538  KFTTLDVQKNGVRFTNSKLSSLNEEYTKSREEYEEAQNAIVKEIISIAAGYVDPVQTLNE  597

Query  598  VLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYF  657
            V+AQLDAV+SFA VS+ APVP++RP ILEKG GR++LKA+RH CVE QDE+AFIPNDV F
Sbjct  598  VIAQLDAVLSFAVVSHAAPVPFIRPKILEKGSGRLVLKAARHPCVEAQDEVAFIPNDVTF  657

Query  658  EKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDS  717
             + ++MFHIITGP+MGGKSTYIRQ GVIVLMAQIGCFVPC+ AE+S+VDC+LARVGAGDS
Sbjct  658  IRGEKMFHIITGPSMGGKSTYIRQVGVIVLMAQIGCFVPCDEAELSVVDCVLARVGAGDS  717

Query  718  QLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAF  777
            Q+KGVSTFMAEMLETA+ILRSAT+DSLI IDELGRGTSTYDGFGLAWAISEYIAT++ +F
Sbjct  718  QIKGVSTFMAEMLETAAILRSATEDSLITIDELGRGTSTYDGFGLAWAISEYIATRLKSF  777

Query  778  CMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFP  837
            C+FATHFHELTALA Q+PTV NLHVTALTT+ TLTMLY+VKKGVCDQSFGIHVAELA+FP
Sbjct  778  CLFATHFHELTALAQQVPTVRNLHVTALTTDSTLTMLYKVKKGVCDQSFGIHVAELASFP  837

Query  838  KHVIECAKQKALELEEFQ---YIGESQGYDIMEPAAKKCYLEREQGEKIIQEFLSKVKQM  894
            KHVI  A++KALELEEFQ    +GE  G     P AKK  +E+++GE+II+ FL+KVK M
Sbjct  838  KHVIANAREKALELEEFQDISSVGEEAG-----PKAKKRCMEKQEGERIIEAFLAKVKSM  892

Query  895  PFTEMSEENITIKLKQLKAEVIAKNNSFVNEIISR  929
            P   MS++ +  +L++LKAEVI++NNSFVNEI+SR
Sbjct  893  PVDGMSDKAVKEELRKLKAEVISQNNSFVNEIVSR  927


>gi|72126137|ref|XP_794098.1|  PREDICTED: similar to DNA mismatch repair protein Msh2 (MutS 
protein homolog 2) [Strongylocentrotus purpuratus]
Length=919

 Score = 1072 bits (2773),  Expect = 0.0
 Identities = 570/918 (62%), Positives = 695/918 (75%), Gaps = 43/918 (4%)

Query  40   GDFYTAHGEDALLAAREVFKTQGVIKYMGPAGAKNLQSVVLSKMNFESFVKDLLLVRQYR  99
            GD+YT HG+DA+ AAREVFKT GVIK++G +GA   +SVVLSKMNFES V+DLLLVRQYR
Sbjct  15   GDYYTVHGQDAVFAAREVFKTLGVIKHLG-SGANKTESVVLSKMNFESVVRDLLLVRQYR  73

Query  100  VEVYKNRAGNKASKENDWYLAYKASPGNLSQFEDILFGNNDMSASIGVVGVKMSAVDGQR  159
            VEVY N+A  KA   N+W LAYKASPGNL+QFE+ILFGNNDMS+S  V+ VK++   GQR
Sbjct  74   VEVYSNQATGKA---NNWTLAYKASPGNLTQFEEILFGNNDMSSSASVMAVKVTGESGQR  130

Query  160  QVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKECVLPGGETAG--DMGKLRQII  217
             VGVGY D+  R+LG+ EF DNDQFSNLEAL++Q+GP+EC+LP G      +  KLRQ++
Sbjct  131  LVGVGYADATLRELGVSEFADNDQFSNLEALMVQLGPRECLLPSGGDPNNPEFSKLRQVV  190

Query  218  QRGGILITERKKADFSTKDIYQDLNRLLK-GKKGEQMNSAVLPEMENQVAVSSLSAVIKF  276
            QRGG+LIT+RKK DF+TKDI QDLNRLLK G+  EQ+NSA LPEME   A+ S+SA+IK+
Sbjct  191  QRGGVLITDRKKVDFTTKDIIQDLNRLLKVGRNVEQVNSAALPEMEKTNAMGSVSALIKY  250

Query  277  LELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTP  336
            +ELL D++NFGQF+LTTFD SQYMKLD AAVRALNL     E+  G  SL +LLNKCKT 
Sbjct  251  MELLGDETNFGQFKLTTFDLSQYMKLDAAAVRALNLTSTGPENINGGMSLTSLLNKCKTA  310

Query  337  QGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQR  396
            QGQRL+ QW+KQPL+DK   EERL++VE F  D ELRQTLQE+ L+R PD  RLAKKFQR
Sbjct  311  QGQRLLGQWVKQPLLDKTYAEERLDMVETFFNDLELRQTLQEEPLKRVPDFQRLAKKFQR  370

Query  397  QAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIET  456
            + A LQDCY++YQ ++ LPN+I+ LEKHEG    LL   F  PLT++  DFSKFQEM+ET
Sbjct  371  KRATLQDCYKVYQAVDYLPNLIEILEKHEGDKAHLLREHFSNPLTEMLMDFSKFQEMVET  430

Query  457  TLDMDQVENHEFLVKPSFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSS  516
            TLD+ QVENHEFL+KP FD NL  LR  M++LE  +++ +  AARDLGL+  K +KL+S+
Sbjct  431  TLDLQQVENHEFLIKPDFDENLMVLRTKMDELEDDLKTQINRAARDLGLEANKTVKLESN  490

Query  517  AQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDA  576
               GY+FRVT KEEK LRNN  +ST+D  KNGV+FTNSKL  LN+E+   K EY E Q A
Sbjct  491  NMLGYFFRVTRKEEKALRNNSKYSTIDTNKNGVRFTNSKLRGLNDEHMAAKEEYNETQKA  550

Query  577  IVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKA  636
            +V EI+ I+SGYVEPM ++ND+ AQLD +VSFAHVS GAP+ YVRP +  +G+G + L  
Sbjct  551  VVDEIIGIASGYVEPMLSMNDITAQLDVLVSFAHVSAGAPISYVRPTLHAQGEGLLHLVQ  610

Query  637  SRHACVEVQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVP  696
            SRH C+E+ D++AFIPN+V F+KDKQMFHIITGPNMGGKST+IRQ GVIVLMAQIGCFVP
Sbjct  611  SRHPCLEMLDDVAFIPNNVTFDKDKQMFHIITGPNMGGKSTFIRQVGVIVLMAQIGCFVP  670

Query  697  CESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTST  756
            C++AE+SIVDCILARVGAGD QLKGVSTFMAEMLETASILRSAT +SLIIIDELGRGTST
Sbjct  671  CDTAEISIVDCILARVGAGDCQLKGVSTFMAEMLETASILRSATSNSLIIIDELGRGTST  730

Query  757  YDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQ  816
            YDGFGLAWAISEYIA+KI  FC+FATHFHELTALA+ IPTVNNLHVTALT++  LT+LY+
Sbjct  731  YDGFGLAWAISEYIASKICGFCLFATHFHELTALADVIPTVNNLHVTALTSDGQLTLLYK  790

Query  817  VKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEEFQYIGESQGYDIMEPAAKKCYLE  876
            VK GV D S           P   +   K+K   +     IG     D  E +   C L 
Sbjct  791  VKPGVMDSS-----------PSMALYVLKEKVGVIVLMAQIGCFVPCDTAEISIVDCILA  839

Query  877  R-------------------------EQGEKIIQEFLSKVKQMPFTEMSEENITIKLKQL  911
            R                          +GE IIQ+F+SKVK +P  ++SE++I  KL+ L
Sbjct  840  RVGAGDCQLKGVSTFMAEMLETASILREGEAIIQDFVSKVKLLPLDDLSEDDIMSKLQSL  899

Query  912  KAEVIAKNNSFVNEIISR  929
            KAEV AK N+++ E++SR
Sbjct  900  KAEVQAKGNAYIEELLSR  917


>gi|50739071|ref|XP_426110.1|  PREDICTED: similar to hypothetical protein [Gallus gallus]
Length=1024

 Score =  875 bits (2261),  Expect = 0.0
 Identities = 466/605 (77%), Positives = 525/605 (86%), Gaps = 35/605 (5%)

Query  360   LNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQ  419
             LNLVEAFV D ELRQ LQEDLLRRFPDLNRLAKKFQRQAA LQDCYR+YQ INQLPNV+Q
Sbjct  423   LNLVEAFVVDTELRQGLQEDLLRRFPDLNRLAKKFQRQAATLQDCYRMYQAINQLPNVVQ  482

Query  420   ALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLS  479
             ALEKHEG HQ LLLAVF+TPL D+ SDFSKF EMIETTLDMD+VENHEFLVK SFDPNL+
Sbjct  483   ALEKHEGAHQMLLLAVFITPLNDIHSDFSKFLEMIETTLDMDKVENHEFLVKASFDPNLT  542

Query  480   ELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNF  539
             ELRE MN+LE+ MQ+ L SAA++LGL+ GK IKL+S++QFG++FR+TCKEEKVLRNN  +
Sbjct  543   ELREKMNELEESMQTLLKSAAKELGLEAGKSIKLESNSQFGHHFRITCKEEKVLRNNMKY  602

Query  540   STVDIQKNGVKFTNS----------------------------KLTSLneeytknkteye  571
                D QKNGVKFTN                             KL+++NEEY KN+ EYE
Sbjct  603   KITDTQKNGVKFTNRYETLLQAEIREELFVFITKYDDMQQFCCKLSAINEEYIKNREEYE  662

Query  572   eAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGR  631
             EAQDAIVKEI+NI+SGY EP+QT+NDV+AQLDA+VSFAHVSNGAPVPYVRP ILEKGQGR
Sbjct  663   EAQDAIVKEIINIASGYAEPIQTMNDVIAQLDAIVSFAHVSNGAPVPYVRPVILEKGQGR  722

Query  632   IILKASRHACVEVQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQI  691
             I+LK +RH C+EVQDE+AFIPNDV FEK KQMFHIITGPNMGGKSTYIRQTGVIVLMAQI
Sbjct  723   IVLKGARHPCIEVQDEVAFIPNDVTFEKGKQMFHIITGPNMGGKSTYIRQTGVIVLMAQI  782

Query  692   GCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELG  751
             GCFVPC SAE++IVDCILARVGAGDSQLKGVSTFMAEMLETASILR+A+++SLIIIDELG
Sbjct  783   GCFVPCNSAEITIVDCILARVGAGDSQLKGVSTFMAEMLETASILRTASENSLIIIDELG  842

Query  752   RGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetl  811
             RGTSTYDGFGLAWAISEYIA+KI AFCMFATHFHELTALA+Q+PTVNNLHVTALT+++TL
Sbjct  843   RGTSTYDGFGLAWAISEYIASKICAFCMFATHFHELTALADQVPTVNNLHVTALTSDDTL  902

Query  812   tMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEEFQYIG---ESQGYDIMEP  868
             TMLY+VK GVCDQSFGIHVAELA FPKHVIE A++KALELEEFQ IG   ES+G    EP
Sbjct  903   TMLYRVKAGVCDQSFGIHVAELAAFPKHVIESAREKALELEEFQDIGRPKESEG----EP  958

Query  869   AAKKCYLEREQGEKIIQEFLSKVKQMPFTEMSEENITIKLKQLKAEVIAKNNSFVNEIIS  928
             AAK+CY ERE+GEKIIQ+FLS+VK +P T+MSEE+I  KLKQL+A+V+AKNN FVNEIIS
Sbjct  959   AAKRCYREREEGEKIIQDFLSQVKALPLTDMSEEDIKTKLKQLRADVLAKNNGFVNEIIS  1018

Query  929   RIKVT  933
             R KVT
Sbjct  1019  RTKVT  1023


 Score =  486 bits (1252),  Expect = 1e-135
 Identities = 239/297 (80%), Positives = 268/297 (90%), Gaps = 0/297 (0%)

Query  62   GVIKYMGPAGAKNLQSVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLAY  121
            GV  Y   AG + L+SVVLSKMNFESFV+DLLLVR YRVEVYKN+AG+K+ KENDWYLAY
Sbjct  17   GVFLYCSSAGNQKLESVVLSKMNFESFVRDLLLVRHYRVEVYKNKAGSKSVKENDWYLAY  76

Query  122  KASPGNLSQFEDILFGNNDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDN  181
            K SPGNL+QFE++LF NNDMS +IGVVGVK+S+ DGQR +GVGYVD+  RKL +CEFPDN
Sbjct  77   KGSPGNLAQFEEVLFANNDMSMAIGVVGVKLSSADGQRVIGVGYVDTTLRKLSVCEFPDN  136

Query  182  DQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDL  241
            DQFSNLEALL+Q+GPKECVLPGG+TAG+MGKLRQ++QRGGILIT+RKKADF+TKDI QDL
Sbjct  137  DQFSNLEALLVQLGPKECVLPGGDTAGEMGKLRQVVQRGGILITDRKKADFTTKDIVQDL  196

Query  242  NRLLKGKKGEQMNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMK  301
            NRLLK +KGEQMNSA LPEME QVAVSSLSAVIKFLELLSDDSNFGQ+ELTTFD SQYM 
Sbjct  197  NRLLKSRKGEQMNSAALPEMEKQVAVSSLSAVIKFLELLSDDSNFGQYELTTFDLSQYMV  256

Query  302  LDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEE  358
            LD AAV+ALNLFQ SVE+   +QSLA LLNKC+TPQGQRLVNQWIKQPLMDKNRIEE
Sbjct  257  LDNAAVQALNLFQSSVENANNTQSLAGLLNKCRTPQGQRLVNQWIKQPLMDKNRIEE  313


>gi|58259371|ref|XP_567098.1|  DNA mismatch repair protein MSH2 [Cryptococcus neoformans var. 
neoformans JEC21]
Length=965

 Score =  778 bits (2009),  Expect = 0.0
 Identities = 420/913 (46%), Positives = 597/913 (65%), Gaps = 35/913 (3%)

Query  5    PKETLQLESAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVI  64
            PK    ++  +E  FVRF + MP K    +RLFDRGD+Y+AHG DA+  A EV++T  V+
Sbjct  12   PKPLFDMDKDSEEKFVRFVERMPTKLDGMIRLFDRGDYYSAHGADAIFIANEVYRTTNVL  71

Query  65   KYMGPAG---------AKNLQSVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKEN  115
            KY+G            A+ L SV +S    ++F+++ L  +Q RVE+Y    G       
Sbjct  72   KYLGSGSKPSSSSGQYARGLPSVTISMALTKAFLREALTTKQMRVEIYAPTGGVAPGSRK  131

Query  116  D---WYLAYKASPGNLSQFEDILFGNNDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRK  172
            D   W ++  ASPGNLSQ ED+LF + D++A+   + +++   DG   VGVG+VD  ++ 
Sbjct  132  DHSKWEISKTASPGNLSQVEDLLFSDRDLTANAVSMAIRVVVKDGINTVGVGFVDVQEKV  191

Query  173  LGLCEFPDNDQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQIIQRGGILITERKKADF  232
            +G+ EF D++ FSN E+LLIQ+G KEC+L   E   ++ KLR +++  G+++T+RK ++F
Sbjct  192  VGVSEFVDDENFSNTESLLIQLGVKECILQADEKRPELAKLRMLVEWCGVIVTDRKSSEF  251

Query  233  STKDIYQDLNRLLKGKKGEQMNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELT  292
             TK++ QDLNRLL     E    A LPE + ++A+S+LSA+I +L LLSD S  GQ  L 
Sbjct  252  QTKNVEQDLNRLLH----ESHAGAALPEFDLKIAMSALSALINYLSLLSDLSLHGQLRLY  307

Query  293  TFDFSQYMKLDIAAVRALNLFQGSVE-DTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLM  351
              D SQYMKLD +A++ALNL     E     + S+  LLN+CKT QG RL+ +W+KQPL+
Sbjct  308  RHDLSQYMKLDASALKALNLMPNPQELGGNKNMSIYGLLNRCKTSQGTRLLGRWLKQPLV  367

Query  352  DKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGI  411
            +++ I +R  +VE FVED+  RQ++Q   L++ PD +R++KKF ++ A L+D  R+YQ +
Sbjct  368  NRHEIIQRQTMVEVFVEDSVNRQSIQTKYLKQMPDFHRISKKFHKRVAGLEDVVRVYQAV  427

Query  412  NQLPNVIQALEKHEGKH---QKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEF  468
              LP + + LE  +      + L+  +++ PL +       +  M+E T+D+D++ NH +
Sbjct  428  QLLPGLQEILENADTPEPGARDLIEEIWLKPLREHIEKLGNYSSMVEDTIDLDELANHNY  487

Query  469  LVKPSFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCK  528
            ++ P+ D +L   RE + ++  ++         DLGLD  K++ L++   + Y FR+T  
Sbjct  488  VILPTIDEDLQRYREELLNVRDQLDDEHRRVGSDLGLDIDKKLHLENHQVYKYSFRITKA  547

Query  529  EEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGY  588
            E  ++RN K +  +  QK+G  FT   L +L+EEY + +  YE+ Q  +VKE+V+I+S Y
Sbjct  548  EASLIRNKKEYIDLATQKSGTIFTTKTLKALSEEYFRLQELYEKQQRHLVKEVVSIASSY  607

Query  589  VEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEI  648
               ++ L++++A +D +VS AHVS+ AP+PYV+P + EKG G +++  +RH C+EVQD+I
Sbjct  608  TPVLEMLDNLIAAVDVIVSMAHVSSEAPIPYVKPILTEKGTGDVVVLGARHPCLEVQDDI  667

Query  649  AFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCI  708
             FIPND    K    F I+TGPNMGGKSTYIRQ GVI LMAQ+GCFVP   A + I DCI
Sbjct  668  VFIPNDHEMRKGDSEFIILTGPNMGGKSTYIRQIGVIALMAQVGCFVPATEARLPIFDCI  727

Query  709  LARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISE  768
            LARVGAGD+QLKGVSTFMAEMLETA+ILRSATKDSLIIIDELGRGTSTYDGFGLAWAISE
Sbjct  728  LARVGAGDNQLKGVSTFMAEMLETATILRSATKDSLIIIDELGRGTSTYDGFGLAWAISE  787

Query  769  YIATKIGAFCMFATHFHELTALANQIPTVNNLHV---------taltteetltMLYQVKK  819
            YIA  I  FC+FATHFHELT+L+ +   V NLHV              E  +T+LYQVK+
Sbjct  788  YIAETIHCFCLFATHFHELTSLSEKNSHVKNLHVEALVKDKDGEGGAKERDITLLYQVKE  847

Query  820  GVCDQSFGIHVAELANFPKHVIECAKQKALELEEFQYIGESQGYDIMEPAAKKCYLEREQ  879
            G+CDQSFGIHVAELANFP+ V++ AK+KA ELE+F   G+ Q      P++K    E + 
Sbjct  848  GICDQSFGIHVAELANFPESVVKLAKRKAEELEDF---GDDQ---TRAPSSKFSKTEIDA  901

Query  880  GEKIIQEFLSKVK  892
            G  I++EFL   K
Sbjct  902  GTDIVKEFLDTWK  914


>gi|71017883|ref|XP_759172.1|  hypothetical protein UM03025.1 [Ustilago maydis 521]
Length=963

 Score =  776 bits (2003),  Expect = 0.0
 Identities = 420/901 (46%), Positives = 597/901 (66%), Gaps = 30/901 (3%)

Query  6    KETLQLESAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIK  65
            K  L L++AAE  F + F+ MP+    T+RLFDR DFY+AHG+DA+L A  VFKT   +K
Sbjct  14   KPDLGLDNAAESSFCQTFKSMPKPTPGTLRLFDRSDFYSAHGDDAILIANLVFKTHSALK  73

Query  66   YMGPAGAKN--LQSVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLAYKA  123
            Y+G  G  N  L S+ LS    ++ ++++L  RQ RVE+Y N     A + N W +  +A
Sbjct  74   YLGSGGKDNGGLPSITLSVAATKNLLREVLTSRQMRVEIYGNAG---AKRNNQWSIVKQA  130

Query  124  SPGNLSQFEDILFGNNDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQ  183
            SPGNL Q ED++F + D+ +S  V+ +K++  DG + VG  + D+  R+L + E+ +ND 
Sbjct  131  SPGNLQQMEDMIFVDADIVSSPIVMALKLTTRDGVKTVGAAFADATNRELCVSEYAENDL  190

Query  184  FSNLEALLIQIGPKECVLPGGETA--GDMGKLRQIIQRGGILITERKKADFSTKDIYQDL  241
            FSN E+L+IQ+G KEC+LP  +     D+ KLR++I+R G+++ + K+ADFS ++I QDL
Sbjct  191  FSNTESLIIQLGVKECILPKDDKGVDADLKKLREVIERCGVVMFDSKRADFSGRNIDQDL  250

Query  242  NRLLKGKKGEQMNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMK  301
             RLLK    E+     L E++ ++A+++ SA++ +L LL+D+SNFGQ+ + T D SQY++
Sbjct  251  RRLLK----EESCGLNLTELDLKLAMAAASALMSYLALLTDESNFGQYSIRTHDLSQYLR  306

Query  302  LDIAAVRALNLF-QGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERL  360
            LD +A+RALNLF +     ++ + S+  LLN+C+T QGQRL+ QW+KQPL++ + IE+R 
Sbjct  307  LDNSALRALNLFPEPGQTGSSKNTSIYGLLNRCRTGQGQRLLGQWLKQPLVNVHAIEQRQ  366

Query  361  NLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQA  420
            NLVE FV D   RQ +Q D L+  PD++R++K+FQ+  A L+D  R+YQ I +LP +IQ 
Sbjct  367  NLVELFVNDNSTRQLIQNDYLKLMPDMHRISKRFQKGIATLEDVVRVYQAILRLPGLIQT  426

Query  421  LEKHEGKHQ---KLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPN  477
            L   E   +   +LL   ++ P    R+  +KF E++E TLD+ ++  H F++KP FD N
Sbjct  427  LADMETPSEALSELLKTSYLDPFEAHRAALTKFNELVEATLDLTELSQHNFVIKPDFDDN  486

Query  478  LSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNK  537
            L E++E ++D   K+      A ++L +D  K++ L++   +GY  RVT  +  ++RN K
Sbjct  487  LREIKEALDDTRDKLDEQHRLAGKELRMDTEKKLHLENHHVYGYCLRVTRTDAGLVRNKK  546

Query  538  NFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLND  597
             +  +   K G+ FTN  L  L  ++      Y  +Q  +VKE++ I+S Y  P++ LN 
Sbjct  547  GYMDIATVKGGLYFTNEALRDLANDFKDLSERYSRSQSGLVKEVIQIASSYCPPLEKLNV  606

Query  598  VLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRII-LKASRHACVEVQDEIAFIPNDVY  656
            VLA LD +VSFAHVS+ APVPYV+P + EKG    + L+ +RH C+EV D+I FI ND  
Sbjct  607  VLAHLDVIVSFAHVSDSAPVPYVKPVVSEKGTNADVDLREARHPCLEVMDDINFISNDTE  666

Query  657  FEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPC-ESAEVSIVDCILARVGAG  715
              + +  F +ITGPNMGGKSTYIRQ G+I LMAQIGCFVP  + A + + DCILARVGAG
Sbjct  667  MVRGQSEFLVITGPNMGGKSTYIRQVGIIALMAQIGCFVPAAQGARLPVFDCILARVGAG  726

Query  716  DSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIG  775
            DSQLKGVSTFMAEMLETA+IL++AT DSLIIIDELGRGTSTYDGFGLAWAISE+IAT I 
Sbjct  727  DSQLKGVSTFMAEMLETATILKTATSDSLIIIDELGRGTSTYDGFGLAWAISEWIATNIR  786

Query  776  AFCMFATHFHELTALANQIPTVNNLHV--------taltteetltMLYQVKKGVCDQSFG  827
              C+FATHFHELT LA Q P V NLHV             +  +T+LY+V+ G+ DQS G
Sbjct  787  CKCLFATHFHELTNLAAQQPHVRNLHVVALVKQKEGGSRQDRDITLLYKVQPGISDQSLG  846

Query  828  IHVAELANFPKHVIECAKQKALELEEFQYIGESQGYDIMEPAAKKCYLEREQGEKIIQEF  887
            I+VAELANFP  VI  AK+KA ELE++    + Q   +++   +      +QG  +I EF
Sbjct  847  INVAELANFPPSVIALAKRKAEELEDYDV--DEQTASVLDSLPEDV---TKQGAALINEF  901

Query  888  L  888
            L
Sbjct  902  L  902


>gi|39973949|ref|XP_368365.1|  hypothetical protein MG00879.4 [Magnaporthe grisea 70-15]
Length=930

 Score =  775 bits (2001),  Expect = 0.0
 Identities = 441/919 (47%), Positives = 589/919 (64%), Gaps = 44/919 (4%)

Query  16   EVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMGPAGAKNL  75
            E GF+RFF+ +P     T+R+F RGD+YTAHGEDA L AR V+K+  V++ +G +    L
Sbjct  18   EHGFIRFFKSLPAAHKDTIRIFFRGDYYTAHGEDANLIARTVYKSTSVVRQLGRSDHTGL  77

Query  76   QSVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLAYKASPGNLSQFEDIL  135
             SV LS   F+ F++D L     RVE+Y++  G       +W +  +ASPGNL   ED L
Sbjct  78   SSVTLSITVFKQFLRDALYKLGKRVEIYESANGRM-----NWKVTKQASPGNLQDVEDEL  132

Query  136  FGNNDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIG  195
             G  D +  I  V +   A +  R VGV + D+  R+LG+ EF DND FSN EALLIQ+G
Sbjct  133  -GQTDSAPMILAVKISSKASEA-RNVGVCFADASVRELGVSEFLDNDLFSNFEALLIQLG  190

Query  196  PKECVLPGGETAG----DMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLKGKKGE  251
             KEC++   +       D+ KL+QII   G+ ++ER  ADF T+DI QDL RLLK    +
Sbjct  191  VKECLIQYDKAEDLKDPDLAKLKQIIDNCGVAMSERPMADFGTRDIEQDLARLLK----D  246

Query  252  QMNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALN  311
            + ++++LP+ + ++A+ + SA+IK+L +L D SNFGQ++L   D SQ+MKLD AA++ALN
Sbjct  247  ERSASLLPQTDLKLAMGAASALIKYLNVLQDPSNFGQYQLFQHDLSQFMKLDAAALKALN  306

Query  312  LFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAE  371
            L  G+  D + + SL  LLN CKTP G RL+ QW+KQPLM K+ IE R  LVEAF+ D E
Sbjct  307  LTPGA-RDGSKTMSLYGLLNHCKTPVGSRLLAQWLKQPLMSKDEIEGRQQLVEAFMNDTE  365

Query  372  LRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEK-HEGKHQK  430
            LRQT+QE+ LR  PDL RLAK+FQR+ ANL+D  R YQ + +LP  I  LE   +  ++ 
Sbjct  366  LRQTMQEEHLRSIPDLYRLAKRFQRKKANLEDVVRAYQVVIRLPGFIGTLEGVMDEAYRD  425

Query  431  LLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIMNDLEK  490
             L   + T L +L     + QEM+ETT+D+D +ENHEF++K  FD  L  +R+ ++ +  
Sbjct  426  PLDVAYTTKLRELSDSLVRLQEMVETTVDLDALENHEFIIKLEFDDGLRIIRKKLDRIRT  485

Query  491  KMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVK  550
            +M      AA DLG +  K+I L++    G+  R+T  E   +RNN  +     QKNGV 
Sbjct  486  EMDREFSKAADDLGQEKEKKIFLENHKVHGFCMRLTRTEAGCIRNNSGYQECSTQKNGVY  545

Query  551  FTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAH  610
            FT   L SL  E+ +    Y   Q ++V E+V++++ Y   ++ L  +LA LD +VSFAH
Sbjct  546  FTTKHLQSLRREFDQLSQSYNRTQSSLVNEVVSVAASYAPLLENLAGILAHLDVIVSFAH  605

Query  611  VSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYFEKDKQMFHIITGP  670
             S  AP+ YVRP I  +GQGR +L+ +RH C+EVQD++ FI NDV  ++    F IITGP
Sbjct  606  CSMHAPISYVRPKIHPRGQGRTLLREARHPCLEVQDDVQFITNDVELDRSGSSFLIITGP  665

Query  671  NMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEML  730
            NMGGKSTYIRQ GVI LMAQIGCFVPC  AE++I D ILARVGA DSQLKGVSTFMAEML
Sbjct  666  NMGGKSTYIRQIGVIALMAQIGCFVPCSEAELTIFDAILARVGASDSQLKGVSTFMAEML  725

Query  731  ETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTAL  790
            ETA+IL+SAT +SLIIIDELGRGTSTYDGFGLAWAISE+I  +IG   +FATHFHELTAL
Sbjct  726  ETANILKSATAESLIIIDELGRGTSTYDGFGLAWAISEHIVVEIGCSALFATHFHELTAL  785

Query  791  ANQIPTVNNLHV----------taltteetltMLYQVKKGVCDQSFGIHVAELANFPKHV  840
            A Q   V NLHV               +  +T+LY+V+ G+CDQSFGIHVAEL  FP  V
Sbjct  786  AEQHKQVANLHVTAHISGTGDDAKADEKREVTLLYKVEPGICDQSFGIHVAELVRFPDKV  845

Query  841  IECAKQKALELEEF-----QYIGESQGYDIMEPAAKKCYLEREQGEKIIQEFLSKVK-QM  894
            +  AK+KA ELE+F       +G     D           + EQG   ++E L + K ++
Sbjct  846  VRMAKRKADELEDFTTKHNDNLGLQYSKD-----------DVEQGSARLKEILVQWKEEV  894

Query  895  PFTEMSEENITIKLKQLKA  913
               +MS E +  K+K L A
Sbjct  895  KAGDMSREEMVAKMKALVA  913


>gi|85093179|ref|XP_959643.1|  DNA MISMATCH REPAIR PROTEIN MSH2 [Neurospora crassa N150]
 gi|32421125|ref|XP_331006.1|  DNA MISMATCH REPAIR PROTEIN MSH2 [Neurospora crassa]
Length=937

 Score =  770 bits (1989),  Expect = 0.0
 Identities = 435/926 (46%), Positives = 592/926 (63%), Gaps = 37/926 (3%)

Query  10   QLESAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMGP  69
            +L+   E GF+RF++ +P+     +R+FDRGD+YTAHG+DA   AR V+KT  VI+ +G 
Sbjct  6    ELKVDDEHGFIRFYKSLPQLGEEAIRIFDRGDWYTAHGDDATFIARTVYKTTSVIRQLGR  65

Query  70   AGAKNLQSVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLAYKASPGNLS  129
            +    L SV ++   F  F+++ L     R+E++ + +G       +W +  +ASPGNL 
Sbjct  66   SDHTGLPSVTMTVTVFRQFLREALFKLGKRIEIWASPSGRM-----NWKVVKQASPGNLQ  120

Query  130  QFEDILFGNNDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEA  189
              ED L G  + +  I  V +   A +  R VGV + D+  R+LG+ EF DND +SN EA
Sbjct  121  DVEDELGGQFEGAPVILAVKISAKASEA-RTVGVCFADASVRELGVSEFLDNDLYSNFEA  179

Query  190  LLIQIGPKECVLPG--GETAGD--MGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLL  245
            LLIQ+G KEC++    GE   D  + KLRQII   G+ I ER   +F TKDI QDL+RLL
Sbjct  180  LLIQLGVKECIVTQDKGEKEKDPELAKLRQIIDNCGVAIAERSAGEFGTKDIEQDLSRLL  239

Query  246  KGKKGEQMNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIA  305
            K ++     +++LP+ + ++A+ S SA+IK+L +L D SNFGQ++L   D +Q+MKLD A
Sbjct  240  KDERA----ASLLPQTDLKLAMGSASALIKYLGILHDPSNFGQYQLYQHDLAQFMKLDAA  295

Query  306  AVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEA  365
            A++ALNL  G+  D   + SL  LLN CKTP G RL++QW+KQPLM+   IE+R  LVEA
Sbjct  296  ALKALNLMPGA-RDGAKNMSLYGLLNHCKTPVGSRLLSQWLKQPLMNAEEIEKRQQLVEA  354

Query  366  FVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEK-H  424
            F  D ELRQ++QE+ LR  PDL RL+K+FQR  A L+D  R YQ + +LP  I  LE   
Sbjct  355  FANDTELRQSMQEEHLRSIPDLYRLSKRFQRGKATLEDVVRAYQVVIRLPGFIGTLEGVM  414

Query  425  EGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREI  484
            +  ++  L  V+   L +L     K QEM+ETT+D+D ++NHEF++KP FD +L  +R+ 
Sbjct  415  DEAYRDPLDEVYTNKLRELSDSLVKLQEMVETTVDLDALDNHEFIIKPEFDDSLRIIRKK  474

Query  485  MNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDI  544
            ++ L   M +    AA DLG +  K+I L++    G+  R+T  E   +RNN  +     
Sbjct  475  LDRLRTDMDNEFAEAAEDLGQEREKKIFLENHKVHGWCMRLTRTEAGCIRNNSRYLECST  534

Query  545  QKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDA  604
            QKNGV FT   L +L  E+ +    Y   Q ++V E+V +++ Y   ++ L  VLA LD 
Sbjct  535  QKNGVYFTTKTLQALRREFDQLSQNYNRTQSSLVNEVVGVAASYCPVLERLAAVLAHLDV  594

Query  605  VVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYFEKDKQMF  664
            +VSFAH S  AP+ YVRP I  +G GR +L  +RH C+EVQD++ FI NDV   ++   F
Sbjct  595  IVSFAHCSVHAPISYVRPKIHPRGTGRTVLTEARHPCMEVQDDVTFITNDVTLTREDSSF  654

Query  665  HIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVST  724
             IITGPNMGGKSTYIRQ GVI LMAQIGCFVPC SAE++I D ILARVGA DSQLKGVST
Sbjct  655  LIITGPNMGGKSTYIRQIGVIALMAQIGCFVPCSSAELTIFDSILARVGASDSQLKGVST  714

Query  725  FMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHF  784
            FMAEMLETA+IL+SAT +SLIIIDELGRGTSTYDGFGLAWAISE+I  +IG F +FATHF
Sbjct  715  FMAEMLETANILKSATAESLIIIDELGRGTSTYDGFGLAWAISEHIVKEIGCFALFATHF  774

Query  785  HELTALANQIPTVNNLHV------------------taltteetltMLYQVKKGVCDQSF  826
            HELTALA+Q P V NLHV                       +  +T+LY+V+ G+CDQSF
Sbjct  775  HELTALADQYPNVKNLHVTAHISGTDTDTDVITDEDEKAKKKREVTLLYKVEPGICDQSF  834

Query  827  GIHVAELANFPKHVIECAKQKALELEEFQYIGESQGYDIMEPAAKKCYLEREQGEKIIQE  886
            GIHVAEL  FP  V+  AK+KA ELE+F    E +    +     K   + E+G  ++++
Sbjct  835  GIHVAELVRFPDKVVRMAKRKADELEDFTSKHEEENGGGLGVQYSK--QDVEEGSALLKD  892

Query  887  FLSKVK-QMPFTEMSEENITIKLKQL  911
             L K K ++    MS+E +  +LK+L
Sbjct  893  VLVKWKDEVKSGRMSKEEMVARLKEL  918


>gi|91093785|ref|XP_967374.1|  PREDICTED: similar to DNA mismatch repair protein Msh2 (MutS 
protein homolog 2) [Tribolium castaneum]
Length=913

 Score =  761 bits (1966),  Expect = 0.0
 Identities = 431/930 (46%), Positives = 608/930 (65%), Gaps = 30/930 (3%)

Query  5    PKETLQLESAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVI  64
            P E L L+   +  FV FF  +P+KP++T+R F  GDFYT H  DA  A+     T  ++
Sbjct  6    PAEALNLDFKQQRLFVDFFNNLPQKPSSTLRFFSHGDFYTLHSSDASSASTF---TGNIV  62

Query  65   KYMGPAGAKNLQSVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLAYKAS  124
            KYMG      L  VVL K  FE +V++LLLVRQYRVEVY     NK    NDW L YK S
Sbjct  63   KYMGED--PQLSYVVLRKSQFEQYVRELLLVRQYRVEVYVKSTPNKI---NDWTLKYKGS  117

Query  125  PGNLSQFEDILFGNNDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQF  184
            PGNLSQFED+LF N  ++ S  V+G+K++     R +    V+S + K  +CEF DN+ F
Sbjct  118  PGNLSQFEDVLFENASITFSNDVLGLKVTK---GRIIAAASVNSTELKFQVCEFSDNECF  174

Query  185  SNLEALLIQIGPKECVLPGGETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRL  244
            + LEAL+ Q+GP+ECV+P GE A D+ +L+++++R  +L+   KK+DF  ++I QDLNRL
Sbjct  175  TELEALIAQVGPRECVIPQGE-APDLIELKKVLERNSVLVARAKKSDFGAENIVQDLNRL  233

Query  245  LKGKKGEQMNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDI  304
            L   +G Q +    PE  N  A++ L+AVIKFL L  D+ NF QF +++ D  +Y++LD 
Sbjct  234  LYFAEGHQRSCLSFPETHNSEALTCLNAVIKFLNLTGDEQNFNQFRISSLDVHRYVRLDN  293

Query  305  AAVRALNLFQG-------SVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIE  357
            AA+ +LN+          S   T+ + SL  +L+ C TPQG+RL+  WIKQPL D N I+
Sbjct  294  AALYSLNILPKPGVNTLESTNQTSKNFSLKGILDHCVTPQGRRLLETWIKQPLKDLNLIQ  353

Query  358  ERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNV  417
            ER  +VE FV++ +LRQ LQ ++L R PDL  L+KK   Q A LQDCY++YQ +  +P +
Sbjct  354  ERHEIVETFVKNPQLRQDLQTEVLARLPDLLLLSKKLSSQKATLQDCYKVYQVVAAVPLL  413

Query  418  IQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPN  477
            ++ L++ +      L +  + P+ +LR+D  K+Q+MIE  LD++ V+  EFLVK SF P 
Sbjct  414  LKNLKQVDNPS---LQSALIHPIEELRNDLDKYQDMIEELLDLELVDRGEFLVKSSFSPA  470

Query  478  LSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNK  537
            L E+      +E++MQ  L +AA DLG +  K IKLD + Q  Y+FRVT KEE VLR+N 
Sbjct  471  LEEISARKLQIEERMQKLLRAAANDLGFEEEKTIKLDYTDQHRYFFRVTLKEEPVLRSNS  530

Query  538  NFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLND  597
             +  +D+ K GV+FTNSKL  LN++Y + K EY E Q  I+ E+  +++GY + ++ LN 
Sbjct  531  RYQILDVVKGGVRFTNSKLAELNDDYAEAKAEYVEQQKTIISEMFAVAAGYGDCLRNLNM  590

Query  598  VLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYF  657
             +A +D +V+FA+V+  A VPY+RP + E GQ  + L   RH C+E Q+ ++FIPN V F
Sbjct  591  FIATVDVLVAFANVAVWARVPYIRPKMFEAGQSPLKLFKVRHPCIEQQEHVSFIPNSVEF  650

Query  658  EKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDS  717
            + +  + HIITGPNM GKSTYIR  GV VLMAQIG FVPC  AE+ IVD ILARVGA D 
Sbjct  651  DSEHTL-HIITGPNMCGKSTYIRSIGVCVLMAQIGSFVPCNYAEIPIVDAILARVGAEDC  709

Query  718  QLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAF  777
             LKG+STFM EM+ETA+I++SAT +SL+IIDELGRGTSTYDG GLA+AI+E++A +I  F
Sbjct  710  LLKGLSTFMVEMIETATIIKSATPNSLVIIDELGRGTSTYDGCGLAFAIAEFLAKEIKCF  769

Query  778  CMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFP  837
             +FATHFHE+T LA   P+V N HVTA+TT+ T+T LYQ++ G CD S+GIH A +  F 
Sbjct  770  SLFATHFHEITRLAEMHPSVCNKHVTAVTTDNTITPLYQIRDGECDNSYGIHCARMVEFS  829

Query  838  KHVIECAKQKALELEEFQYIGESQGYDIMEPAAKKCYLEREQGEKIIQEFLSKVKQMPFT  897
              VI+ A +   +LE   +    Q     EP  ++  +   +G+KIIQ+ L KVK +   
Sbjct  830  DDVIQSAVEHQKKLE---HTAGMQFLRDFEPVLRRQVV--SEGDKIIQDTLEKVKGL--D  882

Query  898  EMSEENITIKLKQLKAEVIAKNNSFVNEII  927
            ++S+E++  ++ +LK E+    N F+  ++
Sbjct  883  KLSDEDLVKEIAKLKEELEGTGNLFIKGLL  912


>gi|76629180|ref|XP_593717.2|  PREDICTED: similar to DNA mismatch repair protein Msh2 (MutS 
protein homolog 2), partial [Bos taurus]
Length=438

 Score =  759 bits (1960),  Expect = 0.0
 Identities = 398/462 (86%), Positives = 413/462 (89%), Gaps = 24/462 (5%)

Query  1    MAVQPKETLQLESAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKT  60
            MAVQPK+TLQL+SAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAH EDALLAAREVFKT
Sbjct  1    MAVQPKDTLQLDSAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHREDALLAAREVFKT  60

Query  61   QGVIKYMGPAGAKNLQSVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLA  120
            QGV+KYMGPA        V   + F +    L +                +S+     + 
Sbjct  61   QGVVKYMGPA--------VCVGVCFSAPALALWI----------------SSQTLPILVI  96

Query  121  YKASPGNLSQFEDILFGNNDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPD  180
              ASPGNLSQFEDILFGNNDMSASIGVVGVKMS VDGQRQVGVGYVDS QRKLGLCEFPD
Sbjct  97   TNASPGNLSQFEDILFGNNDMSASIGVVGVKMSTVDGQRQVGVGYVDSTQRKLGLCEFPD  156

Query  181  NDQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQD  240
            NDQFSNLEALLIQIGPKECV+PGGETAGDMGKLRQ+IQRGGILITERK+ADFSTKDIYQD
Sbjct  157  NDQFSNLEALLIQIGPKECVMPGGETAGDMGKLRQVIQRGGILITERKRADFSTKDIYQD  216

Query  241  LNRLLKGKKGEQMNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYM  300
            LNRLLKGKKGEQ+NSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYM
Sbjct  217  LNRLLKGKKGEQVNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYM  276

Query  301  KLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERL  360
            KLDIAAVRALNLFQGSVEDT+GSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERL
Sbjct  277  KLDIAAVRALNLFQGSVEDTSGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERL  336

Query  361  NLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQA  420
            NLVEAFVEDAELRQ LQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQA
Sbjct  337  NLVEAFVEDAELRQNLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQA  396

Query  421  LEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQ  462
            LEK+EGKHQ L LAVFVTPL DLRSDFSKFQEMIETTLDMDQ
Sbjct  397  LEKYEGKHQALFLAVFVTPLIDLRSDFSKFQEMIETTLDMDQ  438


>gi|70999834|ref|XP_754634.1|  DNA mismatch repair protein Msh2 [Aspergillus fumigatus Af293]
Length=940

 Score =  755 bits (1950),  Expect = 0.0
 Identities = 435/939 (46%), Positives = 600/939 (63%), Gaps = 35/939 (3%)

Query  16   EVGFVRFFQGMPEKPTT-TVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMGPAGAKN  74
            EVGF+RF+  +       T+R+FDRGD+Y+AHG +A   AR V+KT  V++ +G +    
Sbjct  12   EVGFIRFYHSLSSDGNDETIRVFDRGDWYSAHGAEAEFIARTVYKTTSVLRNLGRSETGG  71

Query  75   LQSVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLAYKASPGNLSQFEDI  134
            L SV +S   F +F+++ L     RVE++    G+  +    W L  +ASPGNL   E+ 
Sbjct  72   LPSVTMSVTVFRNFLREALFKLNKRVEIW----GSNGAGRGQWKLMKQASPGNLQDVEEE  127

Query  135  L--FGNNDMSASIGVVGVKMSAVDGQ-RQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALL  191
            L   G   M ++  ++ VK+SA   + R VGV + D+  R+LG+ EF DND +SN E+L+
Sbjct  128  LGSVGGLAMESAPVILAVKISAKASEARGVGVCFADASVRELGVSEFLDNDVYSNFESLI  187

Query  192  IQIGPKECVLPGGETAGD--MGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLKGKK  249
            IQ+G KEC++       D  +GK+R I    GI I+ER  ADF  KDI QDL RLL+   
Sbjct  188  IQLGVKECLVQMDTNRKDVELGKIRAIADNCGIAISERPVADFGVKDIEQDLTRLLR---  244

Query  250  GEQMNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRA  309
             ++ ++A LP+ E ++A+ S SA+IK+L +++D SNFGQ++L   D SQ+MKLD +A+RA
Sbjct  245  -DERSAATLPQTELKLAMGSASALIKYLGVMADPSNFGQYQLYQHDLSQFMKLDASALRA  303

Query  310  LNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVED  369
            LNL  G   D + + SL  LLN CKTP G RL+ QW+KQPLMD   IE+R  LVEAFVE+
Sbjct  304  LNLMPGP-RDGSRTMSLFGLLNHCKTPVGSRLLAQWLKQPLMDLAEIEKRQQLVEAFVEN  362

Query  370  AELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEK-HEGKH  428
             ELRQTLQE+ LR  PDL RLAK+FQR+ ANL+D  R+YQ   +LP  + +LE   + ++
Sbjct  363  TELRQTLQEEHLRSIPDLYRLAKRFQRKQANLEDVVRVYQVAIRLPGFVSSLENVMDEQY  422

Query  429  QKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIMNDL  488
            Q  L   + + L       +K +EM+ETT+D+  +ENHEF++KP FD +L  +R+ ++ L
Sbjct  423  QTPLETEYTSKLRSHSDSLAKLEEMVETTVDLAALENHEFIIKPEFDDSLRIIRKKLDKL  482

Query  489  EKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNG  548
               M       A+DL  +  K++ L++    G+ FR+T  E   +RN + +     QKNG
Sbjct  483  RHDMDVEHRRVAKDLDQEVDKKLFLENHRVHGWCFRLTRNEAGCIRNKREYQECSTQKNG  542

Query  549  VKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSF  608
            V FT S + +L  E+ +  + Y   Q  +V E+VN+++ Y   ++ L  VLA LD +VSF
Sbjct  543  VYFTTSTMQALRREHDQLSSNYNRTQSGLVNEVVNVAASYCPVLEQLAGVLAHLDVIVSF  602

Query  609  AHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYFEKDKQMFHIIT  668
            AH +  AP  YVRP +  +G G  ILK +RH C+E+QD+I+FI NDV   +D+  F IIT
Sbjct  603  AHAAVHAPTAYVRPKMHPRGTGNTILKEARHPCMEMQDDISFITNDVSLIRDESSFLIIT  662

Query  669  GPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAE  728
            GPNMGGKSTYIRQ GVI LMAQ GCFVPC  AE++I DCILARVGA DSQLKGVSTFMAE
Sbjct  663  GPNMGGKSTYIRQIGVIALMAQTGCFVPCSEAELTIFDCILARVGASDSQLKGVSTFMAE  722

Query  729  MLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELT  788
            MLET++IL+SAT +SLIIIDELGRGTSTYDGFGLAWAISE+I T+I  F +FATHFHELT
Sbjct  723  MLETSNILKSATSESLIIIDELGRGTSTYDGFGLAWAISEHIVTEIRCFGLFATHFHELT  782

Query  789  ALANQIP-TVNNLHV-------------taltteetltMLYQVKKGVCDQSFGIHVAELA  834
            ALA++ P +V NLHV                  ++ +T+LY+V+ G+CDQSFGIHVAEL 
Sbjct  783  ALADRYPKSVKNLHVVAFIGDGTNDNAGEERPKKQQVTLLYRVEPGICDQSFGIHVAELV  842

Query  835  NFPKHVIECAKQKALELEEFQYIGESQGYDIMEPAAKKCYLEREQGEKIIQEFLSKVKQM  894
             FP+ V+  A+QKA ELE+F    E+QG             E E+G  +++  L K K  
Sbjct  843  RFPEKVVNMARQKAEELEDFT-SAEAQGQQAGASIDGYSQEEVEEGSALLKGMLLKWKAE  901

Query  895  PFTEMSEENITIKLKQ--LKAEVIAKNNSFVNEIISRIK  931
               E  +  +T++ K+  ++  V A      N++   IK
Sbjct  902  --IESHDRKLTVEEKRQIMRDLVNADEKLRANKVFQSIK  938


>gi|46123905|ref|XP_386506.1|  MSH2_NEUCR DNA mismatch repair protein MSH2 [Gibberella zeae 
PH-1]
Length=930

 Score =  753 bits (1944),  Expect = 0.0
 Identities = 423/924 (45%), Positives = 589/924 (63%), Gaps = 40/924 (4%)

Query  10   QLESAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMGP  69
            +L+   E GF+RFF+ +P+    T+R+FDRGD+YT+HG+DA   A+ V+KT  V++ +G 
Sbjct  6    ELKLDDEGGFIRFFKSLPDVNQDTIRIFDRGDWYTSHGQDANYIAKTVYKTTSVVRQLGR  65

Query  70   AGAKNLQSVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLAYKASPGNLS  129
                 L SV ++   F  F+++ LL    R+E++++ +G       +W    +ASPGNL 
Sbjct  66   NDHTGLPSVTMTMTVFRQFLREALLKLGKRIEIWQSSSGRM-----NWKCIKQASPGNLQ  120

Query  130  QFEDILFGNNDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEA  189
              ED L G  + +  I  V +   A +  R VGV + D+  R+LG+ EF DND +SN EA
Sbjct  121  DVEDDLGGQIESAPMILAVKISAKASEA-RNVGVCFADASVRELGVSEFLDNDLYSNFEA  179

Query  190  LLIQIGPKECVLP--------GGETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDL  241
            LLIQ+G +EC++           E   ++ K+++II   G+ I ER   DF  +DI QDL
Sbjct  180  LLIQLGVRECLIQVDKGDKKDENEKDPELAKIKKIIDNCGVAIAERPAGDFGIRDIEQDL  239

Query  242  NRLLKGKKGEQMNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMK  301
             RLLK    ++ ++++LP+ + ++A+ S +++IK+L +L D SNFGQ++L   D + +MK
Sbjct  240  ARLLK----DERSASLLPQTDLKLAMGSAASLIKYLGVLQDPSNFGQYQLYQHDLAHFMK  295

Query  302  LDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLN  361
            LD AA++ALNL  G   D + + S+  +LN CKTP G RL+ QW+KQPLM KN IE+R  
Sbjct  296  LDAAALKALNLMPGP-RDGSKTMSIFGVLNHCKTPVGSRLLAQWLKQPLMSKNEIEKRQQ  354

Query  362  LVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQAL  421
            LVEAF  D ELRQTLQE+ LR  PDL RL+K+FQR  ANL+D  R YQ + +LP  I   
Sbjct  355  LVEAFYVDTELRQTLQEEHLRSIPDLYRLSKRFQRGKANLEDVVRAYQVVIRLPGFIGTF  414

Query  422  EKHEGKHQKLLL-AVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSE  480
            E    ++ K  L   + T L DL     K Q+M+E T+D+D ++ HE+++K  FD +L  
Sbjct  415  EGVMDENYKDPLDEAYTTKLRDLSDSLGKLQDMVEQTVDLDALDRHEYIIKADFDKSLRI  474

Query  481  LREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQF-GYYFRVTCKEEKVLRNNKNF  539
            +R+ ++ L+K +++   ++A+DLG +  K+I L++S +  G   R+T +E   +RNN  +
Sbjct  475  IRKKLDQLDKDIRAEFTASAKDLGQEADKKIFLETSHKVHGVCMRLTRQEAGCIRNNSKY  534

Query  540  STVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVL  599
                 QKNGV FT  KL +   EY +    Y   Q ++V E+V ++S Y   ++ L  +L
Sbjct  535  QECSTQKNGVYFTTKKLQAYRREYDQLSQNYNRTQSSLVHEVVQVASSYCPVLERLAGIL  594

Query  600  AQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYFEK  659
            A LD +VS AH S  AP  YVRP I  +G+G+ IL+ +RH C+E+QD++ FI NDV   +
Sbjct  595  AHLDVIVSLAHASVHAPESYVRPKIHARGEGQTILREARHPCMELQDDVQFITNDVELTR  654

Query  660  DKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQL  719
            DK  F IITGPNMGGKSTYIRQTGVI LMAQ+GCFVPC  AE++I D ILARVGA DSQL
Sbjct  655  DKSSFLIITGPNMGGKSTYIRQTGVIALMAQVGCFVPCAEAELTIYDSILARVGASDSQL  714

Query  720  KGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCM  779
            KGVSTFMAEMLETA+IL+SAT +SLI+IDELGRGTSTYDGFGLAWAISE+I  +IG   M
Sbjct  715  KGVSTFMAEMLETANILKSATSESLIVIDELGRGTSTYDGFGLAWAISEHIVKEIGCSAM  774

Query  780  FATHFHELTALANQIPTVNNLHV-----------taltteetltMLYQVKKGVCDQSFGI  828
            FATHFHELTALA+Q P V NLHV           +    +  +T+LY+V  GVCDQSFGI
Sbjct  775  FATHFHELTALADQYPQVQNLHVTAHIGGTDAAASEADAKREVTLLYKVAPGVCDQSFGI  834

Query  829  HVAELANFPKHVIECAKQKALELEEFQYIGESQGYDIMEPAAKKCYLEREQGEKIIQEFL  888
            HVAEL  FP  V+  AK+KA ELE+F    E  G    +        + E G  +++  L
Sbjct  835  HVAELVRFPDKVVRMAKRKADELEDFTTKHEDLGLQYSKQ-------DMEDGSAMLKRVL  887

Query  889  SKVK-QMPFTEMSEENITIKLKQL  911
             + K ++   +MS E     LK+L
Sbjct  888  VEWKDKVKAGDMSREEQVAALKEL  911


>gi|67537672|ref|XP_662610.1|  hypothetical protein AN5006.2 [Aspergillus nidulans FGSC A4]
Length=1644

 Score =  748 bits (1931),  Expect = 0.0
 Identities = 426/904 (47%), Positives = 583/904 (64%), Gaps = 38/904 (4%)

Query  16   EVGFVRFFQGMPEKPT---TTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMGPAGA  72
            EVGF+RF++ +    +    T+R+FDRGD+Y+AHG++A   AR V+KT  V++ +G +  
Sbjct  12   EVGFIRFYRSLASDDSHNNETIRIFDRGDWYSAHGKEAEFIARTVYKTTSVLRNLGRSET  71

Query  73   KNLQSVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLAYKASPGNLSQFE  132
              L SV +S   F +F+++ L     R+E++    G+  + +  W    +ASPGNL   E
Sbjct  72   GGLPSVTMSITVFRNFLREALFRLNKRIEIW----GSAGTGKGHWKKVKQASPGNLQDVE  127

Query  133  DILFGNNDMSASIG---VVGVKMSAVDGQ-RQVGVGYVDSIQRKLGLCEFPDNDQFSNLE  188
            + L G   M  S G   ++ VK+SA  G+ R VGV + D+  R+LG+ EF DND +SN E
Sbjct  128  EEL-GAMGMEGSNGAPIIMAVKLSAKAGEARNVGVCFADASVRELGVSEFLDNDVYSNFE  186

Query  189  ALLIQIGPKECVLPGGETAGDM--GKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLK  246
            AL+IQ+G KEC++       D+   K+R I    GI I+ER  +DF  KDI QDL RLL+
Sbjct  187  ALVIQLGVKECLVVQDVNRKDVEVAKIRAICDNCGIAISERPASDFGVKDIEQDLTRLLR  246

Query  247  GKKGEQMNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAA  306
                ++ ++  LPE E ++A+   +A+I++L ++SD +NFGQ++L   D +QYMKLD AA
Sbjct  247  ----DERSAGTLPETELKLAMGGAAALIRYLGVMSDATNFGQYQLYQHDLAQYMKLDAAA  302

Query  307  VRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAF  366
            +RALNL  G   D + S SL  LLN CKTP G RL+ QW+KQPLMD   IE+R  LVEAF
Sbjct  303  LRALNLMPGP-RDGSKSMSLFGLLNHCKTPVGSRLLAQWLKQPLMDLAEIEKRQRLVEAF  361

Query  367  VEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEK-HE  425
            V   ELRQ +QE+ LR  PDL RLAK+FQR+ ANL+D  R+YQ   +LP  + +LE   +
Sbjct  362  VVSTELRQMMQEEHLRSIPDLYRLAKRFQRKQANLEDVVRVYQVAIRLPGFVNSLENVMD  421

Query  426  GKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIM  485
             ++Q  L   +   L +  +  +K +EM+ETT+D+D +ENHEF++KP FD +L  +R+ +
Sbjct  422  EEYQTPLETEYTAKLRNHSASLAKLEEMVETTVDLDALENHEFIIKPEFDDSLRIIRKKL  481

Query  486  NDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQ  545
            + L   M     + ARDL  +  K++ L++   +G+ FR+T  E   +RN K +     Q
Sbjct  482  DQLRHDMYLEHKAVARDLDQEMDKKLFLENHRVYGWCFRLTRNEAGCIRNKKAYQECSTQ  541

Query  546  KNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAV  605
            KNGV FT S + SL  E+ +  + Y   Q  +V E+VN+++ Y   ++ L  VLA LD +
Sbjct  542  KNGVYFTTSTMQSLRREHDQLSSNYNRTQTGLVSEVVNVAASYCPVLEQLAGVLAHLDVI  601

Query  606  VSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYFEKDKQMFH  665
            VSFAH S  AP  Y +P I  +G G  +LK +RH C+E+QD+I+FI NDV   +D+  F 
Sbjct  602  VSFAHASVHAPTAYTKPKIHPRGTGNTVLKEARHPCMEMQDDISFITNDVSLIRDESSFL  661

Query  666  IITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTF  725
            IITGPNMGGKSTYIR  GVI LMAQIGCFVPC  AE++I DCILARVGA DSQLKGVSTF
Sbjct  662  IITGPNMGGKSTYIRMIGVIALMAQIGCFVPCTEAELTIFDCILARVGASDSQLKGVSTF  721

Query  726  MAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFH  785
            MAEMLET++IL+SAT +SLIIIDELGRGTSTYDGFGLAWAISE+I T+I  F +FATHFH
Sbjct  722  MAEMLETSNILKSATSESLIIIDELGRGTSTYDGFGLAWAISEHIVTEIRCFGLFATHFH  781

Query  786  ELTALANQIP-TVNNLHV----------------taltteetltMLYQVKKGVCDQSFGI  828
            ELT LA++ P +V NLHV                    T + +T+LY+V+ G+CDQSFGI
Sbjct  782  ELTTLADRYPKSVKNLHVVAFIGDGTTANEEDEKEKRKTRQKVTLLYRVEPGICDQSFGI  841

Query  829  HVAELANFPKHVIECAKQKALELEEFQYIGESQGYDIMEPAAKKCYLEREQGEKIIQEFL  888
            HVAEL  FP+ V+  A+QKA ELE+F    +S G        K    E E+G  +++  L
Sbjct  842  HVAELVRFPEKVVNMARQKAEELEDFT-SADSAGNAASATIDKYSQEEVEEGSALLKALL  900

Query  889  SKVK  892
             K K
Sbjct  901  VKWK  904


>gi|24584320|ref|NP_523565.2|  spellchecker1 CG4215-PA, isoform A [Drosophila melanogaster]
Length=917

 Score =  701 bits (1809),  Expect = 0.0
 Identities = 380/854 (44%), Positives = 554/854 (64%), Gaps = 23/854 (2%)

Query  8    TLQLESAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHG-EDALLAAREVFKTQGVIKY  66
            TL +++ A   F++F   + EKP TTVR FD  D YT HG +D  L A+ V+K+   I  
Sbjct  13   TLNMDTNARRNFIKFHAKLGEKPATTVRFFDHTDRYTVHGSDDCELVAKIVYKSTAFIGA  72

Query  67   MGPAGAKN-LQSVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLAYKASP  125
            + P   K  LQ V +SK NFE  V++LLLVR YRVEVY           +DW + Y+ SP
Sbjct  73   LLPDDKKETLQFVSMSKGNFELAVRELLLVRNYRVEVY-------VKNSSDWEIEYRGSP  125

Query  126  GNLSQFEDILFGNNDMSASIGVVG--VKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQ  183
            GNL QFEDILF N ++     ++   VK+    GQR+VGV  V+    K  L EF D+D 
Sbjct  126  GNLLQFEDILFSNKEVLVGNSIISLLVKLDG-GGQRRVGVASVEQNDCKFQLLEFLDDDF  184

Query  184  FSNLEALLIQIGPKECVLPGGETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNR  243
            F+ LEA ++ +GPKEC+LP  E  G+   ++ ++ R G++IT  KK+     D+ QDLNR
Sbjct  185  FTELEATVVLLGPKECLLPSIE--GEYSAVKTLLDRNGVMITMPKKS--GDNDLLQDLNR  240

Query  244  LLKGKKGEQMNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLD  303
            LL+  KG+Q ++  L E++ Q+A ++L   IK+L+L++D  N G +E+   D ++++ LD
Sbjct  241  LLRFAKGQQEDATGLKELQLQLASNALKTAIKYLDLVNDAGNLGHYEIKQLDLNRFVHLD  300

Query  304  IAAVRALNLF-QGSVEDTTGS---QSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEER  359
             AAV ALN+  +     +  S   QS+  +L+ C+TPQG RL+ QW+KQPL  +N + +R
Sbjct  301  SAAVAALNIMPKPGTHPSMPSYRWQSVLGVLDHCRTPQGHRLMGQWVKQPLRSRNILNDR  360

Query  360  LNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQ  419
             N+V+  +E  +  +TL  D L+R PD+  L KK  R+ ANLQD +R+YQ I + P +++
Sbjct  361  HNIVQCLLESPDTMETLSLDYLKRIPDILMLTKKLMRRKANLQDLFRIYQVILRTPKILK  420

Query  420  ALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLS  479
             L + +      + +V   P      D +  ++M+E  +D + +E  E+LVK SFD  L 
Sbjct  421  VLHELDNS---TIESVICAPFKSFLKDLTGLKQMVEQVVDFEAIERGEYLVKASFDSRLM  477

Query  480  ELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNF  539
            EL+++M +L  KM+      +++L LD   Q+KL+S A+ G++FR+T K++ VLR NKN+
Sbjct  478  ELQQMMTELYSKMEELQFKCSQELNLDGKNQVKLESVAKLGHHFRITVKDDSVLRKNKNY  537

Query  540  STVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVL  599
              VD+ K GV+FT+ KL    +E+   +T YEE Q +IV+EI++++ GY  P+  LN+ L
Sbjct  538  RIVDVIKGGVRFTSDKLEGYADEFASCRTRYEEQQLSIVEEIIHVAVGYAAPLTLLNNEL  597

Query  600  AQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYFEK  659
            AQLD +VSFA  +  AP PYVRP +LE+G   ++L+  RH C+E+Q+ + FI N V F+K
Sbjct  598  AQLDCLVSFAIAARSAPTPYVRPKMLEEGARELVLEDVRHPCLELQEHVNFIANSVDFKK  657

Query  660  DKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQL  719
            ++    IITGPNMGGKSTYIR  G  VLMA IG FVPC  A +S+VD IL RVGA D+ +
Sbjct  658  EECNMFIITGPNMGGKSTYIRSVGTAVLMAHIGAFVPCSLATISMVDSILGRVGASDNII  717

Query  720  KGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCM  779
            KG+STFM EM+ET+ I+R+AT  SL+IIDELGRGTSTY+G G+AW+I+E++A +   F +
Sbjct  718  KGLSTFMVEMIETSGIIRTATDKSLVIIDELGRGTSTYEGCGIAWSIAEHLAKETKCFTL  777

Query  780  FATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKH  839
            FATHFHE+T LA  + TV N H+ A+   +  T+LYQV+ GV ++SFGI VA LANFP+H
Sbjct  778  FATHFHEITKLAETLSTVKNCHMAAVADADDFTLLYQVRSGVMEKSFGIQVARLANFPEH  837

Query  840  VIECAKQKALELEE  853
            V++ A++   E E+
Sbjct  838  VVQNAQEVYNEFED  851


>gi|58392583|ref|XP_319476.2|  ENSANGP00000014300 [Anopheles gambiae str. PEST]
Length=815

 Score =  690 bits (1781),  Expect = 0.0
 Identities = 365/821 (44%), Positives = 539/821 (65%), Gaps = 13/821 (1%)

Query  29   KPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMGPAGAKNLQSVVLSKMNFESF  88
            KP TTVR+FDR D+Y+ HG DA   A+ +FK+   IK M     + L  V LSK NFE  
Sbjct  1    KPATTVRIFDRTDYYSCHGVDAAFVAKTLFKSSNAIKIM-EVDNQQLPYVSLSKNNFEGL  59

Query  89   VKDLLLVRQYRVEVYKNRAGNKASKENDWYLAYKASPGNLSQFEDILFGNN-DMSASIGV  147
            ++DLLLVR YR+EVY   +  K   ENDW + YK SPGNL+ FED+LF NN +M     +
Sbjct  60   IRDLLLVRNYRIEVYSKES--KRKHENDWSIQYKGSPGNLAHFEDVLFNNNNEMVIGSAL  117

Query  148  VGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKECVLPGGETA  207
            + + +     QR +G+G+++  +R++ + EF D+D ++ LEAL++  GPKEC+LP    A
Sbjct  118  IALHIRHESKQRMIGLGFIEVNERRMAVIEFVDDDFYTELEALIVVTGPKECLLPS--VA  175

Query  208  GDMGKLRQIIQRGGILITERKKADFSTK--DIYQDLNRLLKGKKGEQMNSAVLPEMENQV  265
             +  ++ QI++R  +++T RK  +F     D+   LN+LL+ ++G+  N+  +PE+   +
Sbjct  176  AEYERVEQIMKRNNVIVTTRKVKEFMKDKVDVIDSLNKLLRFREGQHPNANTIPEVSKSL  235

Query  266  AVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLFQGSVEDTTGS--  323
            A+S+L  ++ +LEL  +  N GQF L + D ++++ LD AAV ALNLF         +  
Sbjct  236  ALSALGVILNYLELTQEPGNHGQFRLESLDANRFVHLDAAAVSALNLFPNPGTSVKSNAY  295

Query  324  --QSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLL  381
              QS+  +L++C+TPQG RL+ QW+KQPL D   I++R ++VE FV +  +R  L ++ L
Sbjct  296  RWQSVLGVLDRCRTPQGHRLMAQWMKQPLQDYEIIKDRHDIVEYFVNNTIVRSELYDNHL  355

Query  382  RRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVFVTPLT  441
            ++ PD+  + K+  R+ A+LQD +RLYQ I ++P ++  LE ++ +   +L  ++  P+ 
Sbjct  356  KKLPDIMFVLKRLLRRKASLQDIFRLYQVILRVPRMLTLLETNDLESIAVLNNIY-NPIK  414

Query  442  DLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIMNDLEKKMQSTLISAAR  501
            D  +D   F+ M+E  +D+  VE+ E+LVK  FD  L + +E M+++  KM+  L + A+
Sbjct  415  DSLNDLKLFKSMVEQIIDLQAVEHGEYLVKADFDSQLKKRKEEMDEVYSKMKHHLSTVAK  474

Query  502  DLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLne  561
            D+GLD G  IKL+  +Q GY+FR+T K+E ++R N ++  +D  K GV+F  +KL   +E
Sbjct  475  DIGLDAGSSIKLEFVSQHGYHFRITLKDETLIRKNNSYRILDAVKGGVRFITTKLQDYSE  534

Query  562  eytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVR  621
             +   K  YEE Q  IV E++ ++ GYVEP   LN  +A LD +VSFA  ++ AP+PYVR
Sbjct  535  SFATLKIAYEEQQQTIVAEVIRVAVGYVEPWTMLNSQIAYLDCLVSFAVSASTAPIPYVR  594

Query  622  PAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQ  681
            P +  +G   + L   RH C+E+Q+++ +I ND  F+  +   +IITGPNMGGKSTYIR 
Sbjct  595  PKMYREGPSVLKLIQVRHPCLELQEDVNYIANDAMFDAKETSTYIITGPNMGGKSTYIRS  654

Query  682  TGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATK  741
             GV VLMA IG FVPCESAE+SI DCIL RVGA D+  KG+STFM EM+ETA I+R AT 
Sbjct  655  VGVTVLMAHIGSFVPCESAEMSIFDCILGRVGADDNFTKGLSTFMVEMIETAGIIRRATD  714

Query  742  DSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLH  801
             SL+IIDELGRGTSTY+G G+AW+I+E++A +   F +FATHF E+T LA+ +  V N H
Sbjct  715  RSLVIIDELGRGTSTYEGCGIAWSIAEWLAKESKCFTLFATHFQEITDLASYVENVKNCH  774

Query  802  VtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKHVIE  842
            + A+   E LT+LYQVK GV ++SFGI VA+LANFP  VI+
Sbjct  775  MQAIVDGECLTLLYQVKPGVMEKSFGIQVAKLANFPPGVIK  815


>gi|45199121|ref|NP_986150.1|  AFR603Cp [Eremothecium gossypii]
Length=956

 Score =  681 bits (1756),  Expect = 0.0
 Identities = 388/880 (44%), Positives = 561/880 (63%), Gaps = 53/880 (6%)

Query  12   ESAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIK--YMGP  69
            +++ E GF R F  +P KP+ T+R+ DRG++YT  G+DA+  A  V+ TQ V+K   +  
Sbjct  12   DASEERGFYRRFASLPPKPSQTIRIVDRGEYYTILGQDAIFVAENVYHTQAVLKDFRVDA  71

Query  70   AGAKNLQS----VVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLAYKASP  125
            A AK L      V +S     S +K  LL + ++VE+Y          +  W L   ASP
Sbjct  72   AVAKQLAEPTKYVTMSPQVIASLLKMALLEQGFKVEIY----------DRSWKLLKSASP  121

Query  126  GNLSQFEDILFGNNDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFS  185
            GN+ Q +D++  + D S  +  V  + +A DG   +GV YVDS   K+G+ +  DN+ +S
Sbjct  122  GNIDQVDDLMNVSVDSSVVLASVKFQFNASDGFCVLGVSYVDSNSYKIGMLDIVDNEVYS  181

Query  186  NLEALLIQIGPKECVLP----GGETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDL  241
            N E+ LIQ+G KEC+LP        + ++ K+  +I+R G ++T  K ++F+ KD+  DL
Sbjct  182  NFESFLIQLGVKECLLPDLRNNESFSAELKKVTGVIERCGCVVTFVKNSEFNNKDVEADL  241

Query  242  NRLLKGKKGEQMNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMK  301
             +L     G+++ ++ LP   +++A++S +A+I + +LL++  N G +++  +  S++MK
Sbjct  242  AKLC----GDELATS-LPRF-SKLALASCNALIGYQQLLNNAGNEGSYQIVEYSLSEFMK  295

Query  302  LDIAAVRALNLFQGSVEDTTGSQ------------SLAALLNKCKTPQGQRLVNQWIKQP  349
            LD +AV+AL++F       +G              SL  LLNKCKT  G RL+N+W+KQP
Sbjct  296  LDASAVKALSIFPQGPSTQSGMATSGKFGGNGKITSLLQLLNKCKTNAGVRLLNEWLKQP  355

Query  350  LMDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQ  409
            L DK  IE+R NLV+  V+  ELR  L++D L   PD+ RL KK  R  + L+D  ++YQ
Sbjct  356  LSDKGSIEKRHNLVDYLVDQLELRSILRDDYLPLVPDVRRLTKKLNRNGS-LEDVLKVYQ  414

Query  410  GINQLPNVIQALEKH-----EGKHQK-LLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQV  463
               ++P +   L+++     EG H K L+L  +  PL +      KFQEM+ETT+D++  
Sbjct  415  FAQRIPEINGVLKENLDALSEGSHVKDLVLETWYNPLNEHVEPLHKFQEMVETTVDLEAY  474

Query  464  EN-HEFLVKPSFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYY  522
            E  +EF++K  F+  L+ +R  + DL+ K+++  +  + DLG DP K++KL++    G+ 
Sbjct  475  EETNEFMIKVEFNDELARIRTELVDLKDKIRTIHLDTSDDLGFDPEKKLKLENHHVHGWC  534

Query  523  FRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIV  582
             R+T  + K LR +K +  +   K G+ F+  +L  L++E    + +Y+  Q A+VKEIV
Sbjct  535  MRLTRNDAKALRQHKKYLELSTVKAGIYFSTKELKLLSDEIGTLQQDYDRKQSALVKEIV  594

Query  583  NISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAI--LEKGQGRIILKASRHA  640
             I+  Y   ++ L+ VLA LD + SFAHVS+ AP+PYVRP +  +  GQ ++ L ASRH 
Sbjct  595  TITLSYSPVLEKLSLVLANLDVLCSFAHVSSYAPIPYVRPVMYDMHAGQRKMELLASRHP  654

Query  641  CVEVQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESA  700
             VE QDE+ FI NDV  E D   F IITGPNMGGKSTYIRQ GVI L+AQIGCFVPC++A
Sbjct  655  LVEAQDEVTFISNDVVLEADSSGFAIITGPNMGGKSTYIRQVGVICLLAQIGCFVPCDAA  714

Query  701  EVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGF  760
            E++IVD IL RVGAGDSQLKGVSTFMAEMLETASILR+ATK+SLIIIDELGRGTSTYDGF
Sbjct  715  EITIVDAILCRVGAGDSQLKGVSTFMAEMLETASILRNATKNSLIIIDELGRGTSTYDGF  774

Query  761  GLAWAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHV-----taltteetltMLY  815
            GLAW+ISE+IA  IG F +FATHFHELTALA+  P V NLHV           + +T+LY
Sbjct  775  GLAWSISEHIAKNIGCFALFATHFHELTALADDCPNVTNLHVVAHVEEKSHKSDDITLLY  834

Query  816  QVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEEFQ  855
            +V+ G+ DQSFGIHVAE+  FP  +++ AK+KA EL++ +
Sbjct  835  KVEPGISDQSFGIHVAEVVQFPSKIVKMAKRKATELDDIK  874


>gi|66819479|ref|XP_643399.1|  DNA mismatch repair protein [Dictyostelium discoideum]
Length=937

 Score =  669 bits (1727),  Expect = 0.0
 Identities = 383/904 (42%), Positives = 556/904 (61%), Gaps = 67/904 (7%)

Query  4    QPKETLQLESAAEVGFVRFFQGM--PEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQ  61
            + +E+ Q+    +  FV FFQ +    + T T+RLFDR  +Y+ HGEDA+  A   FK++
Sbjct  5    EQEESSQVVLKEDKTFVTFFQSLVSSNEDTDTIRLFDRKGYYSIHGEDAVFVAMMHFKSK  64

Query  62   GVIKYMG---PAGAKNLQ-------------------------SVVLSKMNFESFVKDLL  93
              +KY     P   K ++                           +     FE+ VK+LL
Sbjct  65   KSLKYWSISDPNPKKKIKIDNDGSLTTTASSSQQQQQELGLAVLTIRQGYEFENIVKELL  124

Query  94   LVRQYRVEVYKNRAGNKASKENDWYLAYKASPGNLSQFEDILFGNNDMSASIGVVGVKMS  153
              ++ ++E++  +  +K      W L  K SPGN   FED+L  N +   S+ ++ +K++
Sbjct  125  DEKK-KIEIWSMKPNSK----QQWELIKKGSPGNTQMFEDVLL-NGNCEGSV-MMALKVT  177

Query  154  AVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKECVLPGGETAGDMGKL  213
               G    G+ + D+  + +G+ +F DND  SNL + ++Q+  KEC+L   +   D  K+
Sbjct  178  REKGSIVFGISFGDATFKTIGVSQFMDNDNLSNLSSFIMQMSVKECLLCCDQKNYDYQKV  237

Query  214  RQIIQRGGILITERKKADFSTKDIYQDLNRLLKGKKGEQMNSAVLPEMENQVAVSSLSAV  273
            ++ +   GI  TE  K+DFS+K+  QDL RLL   K        LP++E + A+ S S +
Sbjct  238  KEKLSDAGIPFTELPKSDFSSKNAEQDLTRLLGSVKNN------LPDIEQEHAIQSASCL  291

Query  274  IKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLFQ----------------GSV  317
            IK L+LLS+ + FG+F+L  +D  +YMKLD ++ + L++                  G+ 
Sbjct  292  IKHLDLLSNPNYFGKFKLEKYDLDRYMKLDSSSFKGLHIIDLKDSSVSAAAGGGGAGGAS  351

Query  318  EDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQ  377
              +   QSL  LLN+C TP G RL+ QW+KQPL++   IE RLN VEAF  D ELRQ+L+
Sbjct  352  SSSNKDQSLYNLLNQCNTPMGSRLLLQWVKQPLLNAEEIEARLNFVEAFYNDLELRQSLR  411

Query  378  EDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVFV  437
             + L++  DL+RL+KK   Q A L+DC  LY  + +LP V+Q+L  H   HQ+L+   F+
Sbjct  412  SNDLKKIGDLDRLSKKLHGQKATLEDCVNLYGIVTRLPVVLQSLNNHSSIHQELIKVNFI  471

Query  438  TPLTDLRSDFSKFQEMIETTLDMDQV-ENHEFLVKPSFDPNLSELREIMNDLEKKMQSTL  496
              L  + SDF+KF  M+E T+D+D   + HE++++ SFD  L  ++   + +  K++   
Sbjct  472  ESLESIISDFAKFCAMVEKTIDLDLANDKHEYVIRSSFDETLRGIQLKKDQISNKIERFR  531

Query  497  ISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKL  556
            +  A DL LD  K +KL  S +  +  R++ K+E  +R+ K +      K+GV+F   ++
Sbjct  532  VDIADDLNLDEAK-VKLHYSEKDMFLLRISRKDEVAIRDKKKYIVHATAKDGVRFATREI  590

Query  557  TSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAP  616
             +LNE Y K   EY + QD + K  + I++ +V  ++ L+ ++A LD  V+ +HVS+ AP
Sbjct  591  DTLNEAYKKWSAEYLDKQDGLAKRTLQIAASFVPLIEDLSSLIATLDVFVTLSHVSSIAP  650

Query  617  VPYVRPAIL-----EKGQGRIILKASRHACVEVQDEIAFIPNDVYFEKDKQMFHIITGPN  671
            +P++RP I+     E G G +I+   RH CVE+QD + FI ND+   + +  F IITGPN
Sbjct  651  IPFIRPEIIPLGSDENGAGTVII-GGRHPCVEIQDNVNFIANDIDLTRGQSQFQIITGPN  709

Query  672  MGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLE  731
            MGGKST+IRQ G+IVLMAQIGCFVP + A +++VDCIL+RVGAGDSQL+GVSTFMAEMLE
Sbjct  710  MGGKSTFIRQVGLIVLMAQIGCFVPAQKATIAVVDCILSRVGAGDSQLRGVSTFMAEMLE  769

Query  732  TASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALA  791
            T+ IL+ ATK+SLIIIDELGRGTSTYDGFGLAW I+EYI  +IG FC+FATHFHELT L+
Sbjct  770  TSYILKVATKNSLIIIDELGRGTSTYDGFGLAWGIAEYICNQIGGFCLFATHFHELTILS  829

Query  792  NQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALEL  851
            + +P V NLHV+A T   T T+LY+V++G CDQSFGIHVA LANFP  VIE AKQKA EL
Sbjct  830  DLLPMVKNLHVSASTQNNTFTLLYKVEQGPCDQSFGIHVAILANFPSQVIENAKQKAKEL  889

Query  852  EEFQ  855
            E F+
Sbjct  890  ESFE  893


>gi|57912709|ref|XP_554197.1|  ENSANGP00000028062 [Anopheles gambiae str. PEST]
Length=827

 Score =  667 bits (1722),  Expect = 0.0
 Identities = 361/832 (43%), Positives = 537/832 (64%), Gaps = 24/832 (2%)

Query  29   KPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMGPAGAKNLQSVVLSKMNFESF  88
            KP TTVR+FDR D+Y+ HG DA   A+ +FK+   IK M     + L  V LSK NFE  
Sbjct  1    KPATTVRIFDRTDYYSCHGVDAAFVAKTLFKSSNAIKIM-EVDNQQLPYVSLSKNNFEGL  59

Query  89   VKDLLLVRQYRVEVYKNRAGNKASKENDWYLAYKASPGNLSQFEDILFGNN-DMSASIGV  147
            ++DLLLVR YR+EVY   +  K   ENDW + YK SPGNL+ FED+LF NN +M     +
Sbjct  60   IRDLLLVRNYRIEVYSKES--KRKHENDWSIQYKGSPGNLAHFEDVLFNNNNEMVIGSAL  117

Query  148  VGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKECVLPGGETA  207
            + + +     QR +G+G+++  +R++ + EF D+D ++ LEAL++  GPKEC+LP    A
Sbjct  118  IALHIRHESKQRMIGLGFIEVNERRMAVIEFVDDDFYTELEALIVVTGPKECLLPS--VA  175

Query  208  GDMG---KLRQIIQRGGILITERKKADFSTKDIYQD----------LNRLLKGKKGEQMN  254
             ++     +++I++   +L+   ++   S   I  +          LN+LL+ ++G+  N
Sbjct  176  AEVSCTYYIKRILKSVLLLLLLYQQCHISVSAIITNSIFGARTSISLNKLLRFREGQHPN  235

Query  255  SAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLFQ  314
            +  +PE+   +A+S+L  ++ +LEL  +  N GQF L + D ++++ LD AAV ALNLF 
Sbjct  236  ANTIPEVSKSLALSALGVILNYLELTQEPGNHGQFRLESLDANRFVHLDAAAVSALNLFP  295

Query  315  GSVEDTTGS----QSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDA  370
                    +    QS+  +L++C+TPQG RL+ QW+KQPL D   I++R ++VE FV + 
Sbjct  296  NPGTSVKSNAYRWQSVLGVLDRCRTPQGHRLMAQWMKQPLQDYEIIKDRHDIVEYFVNNT  355

Query  371  ELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQK  430
             +R  L ++ L++ PD+  + K+  R+ A+LQD +RLYQ I ++P ++  LE ++ +   
Sbjct  356  IVRSELYDNHLKKLPDIMFVLKRLLRRKASLQDIFRLYQVILRVPRMLTLLETNDLESIA  415

Query  431  LLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIMNDLEK  490
            +L  ++  P+ D  +D   F+ M+E  +D+  VE+ E+LVK  FD  L + +E M+++  
Sbjct  416  VLNNIY-NPIKDSLNDLKLFKSMVEQIIDLQAVEHGEYLVKADFDSQLKKRKEEMDEVYS  474

Query  491  KMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVK  550
            KM+  L + A+D+GLD G  IKL+  +Q GY+FR+T K+E ++R N ++  +D  K GV+
Sbjct  475  KMKHHLSTVAKDIGLDAGSSIKLEFVSQHGYHFRITLKDETLIRKNNSYRILDAVKGGVR  534

Query  551  FTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAH  610
            F  +KL   +E +   K  YEE Q  IV E++ ++ GYVEP   LN  +A LD +VSFA 
Sbjct  535  FITTKLQDYSESFATLKIAYEEQQQTIVAEVIRVAVGYVEPWTMLNSQIAYLDCLVSFAV  594

Query  611  VSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYFEKDKQMFHIITGP  670
             ++ AP+PYVRP +  +G   + L   RH C+E+Q+++ +I ND  F+  +   +IITGP
Sbjct  595  SASTAPIPYVRPKMYREGPSVLKLIQVRHPCLELQEDVNYIANDAMFDAKETSTYIITGP  654

Query  671  NMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEML  730
            NMGGKSTYIR  GV VLMA IG FVPCESAE+SI DCIL RVGA D+  KG+STFM EM+
Sbjct  655  NMGGKSTYIRSVGVTVLMAHIGSFVPCESAEMSIFDCILGRVGADDNFTKGLSTFMVEMI  714

Query  731  ETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTAL  790
            ETA I+R AT  SL+IIDELGRGTSTY+G G+AW+I+E++A +   F +FATHF E+T L
Sbjct  715  ETAGIIRRATDRSLVIIDELGRGTSTYEGCGIAWSIAEWLAKESKCFTLFATHFQEITDL  774

Query  791  ANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKHVIE  842
            A+ +  V N H+ A+   E LT+LYQVK GV ++SFGI VA+LANFP  VI+
Sbjct  775  ASYVENVKNCHMQAIVDGECLTLLYQVKPGVMEKSFGIQVAKLANFPPGVIK  826


>gi|42565226|ref|NP_566804.3|  MSH2 (MUTS HOMOLOG 2); ATP binding / damaged DNA binding [Arabidopsis 
thaliana]
Length=937

 Score =  663 bits (1711),  Expect = 0.0
 Identities = 387/927 (41%), Positives = 567/927 (61%), Gaps = 37/927 (3%)

Query  9    LQLESAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMG  68
            L+L++    GF+ F++ +P   T  VR FDR D+YTAHGE+++  A+  + T   ++ +G
Sbjct  14   LKLDAKQAQGFLSFYKTLPND-TRAVRFFDRKDYYTAHGENSVFIAKTYYHTTTALRQLG  72

Query  69   PAGAKNLQSVVLSKMNFESFVKDLLLVRQ-YRVEVYKNRAGNKASKENDWYLAYKASPGN  127
             +G+  L SV +S+  FE+  +DLLL R  + VE+Y+    N       W L    SPGN
Sbjct  73   -SGSNALSSVSISRNMFETIARDLLLERNDHTVELYEGSGSN-------WRLVKTGSPGN  124

Query  128  LSQFEDILFGNNDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNL  187
            +  FED+LF NN+M  +  VV +  S  DG+  +G+ YVD  +R LGL EF D+ +F+NL
Sbjct  125  IGSFEDVLFANNEMQDTPVVVSIFPSFHDGRCVIGMAYVDLTRRVLGLAEFLDDSRFTNL  184

Query  188  EALLIQIGPKECVLPGGE-TAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLK  246
            E+ LI +G KEC+ P     + +   L   ++R  ++ITERKK +F  +D+  DL RL+K
Sbjct  185  ESSLIALGAKECIFPAESGKSNECKSLYDSLERCAVMITERKKHEFKGRDLDSDLKRLVK  244

Query  247  GKKGEQMNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAA  306
            G   E +   V       +A  +L A++ F ELLS++ N+G F +  +D   +M+LD AA
Sbjct  245  GNI-EPVRDLV---SGFDLATPALGALLSFSELLSNEDNYGNFTIRRYDIGGFMRLDSAA  300

Query  307  VRALNLFQGSVEDTTGSQSLAALLNK-CKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEA  365
            +RALN+ + S  D   + SL  L+N+ C    G+RL++ W+KQPL+D N I+ RL++V+ 
Sbjct  301  MRALNVME-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLVDLNEIKTRLDIVQC  359

Query  366  FVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHE  425
            FVE+A LRQ L++ L +R  D+ RL +  +R+   LQ   +LYQ   +LP +  A++++ 
Sbjct  360  FVEEAGLRQDLRQHL-KRISDVERLLRSLERRRGGLQHIIKLYQSTIRLPFIKTAMQQYT  418

Query  426  GKHQKLLLAVFVTPLTDL--RSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELRE  483
            G+   L+   ++  L  L  +    KF +++E ++D+DQ+EN E+++  S+D  L+ L++
Sbjct  419  GEFASLISERYLKKLEALSDQDHLGKFIDLVECSVDLDQLENGEYMISSSYDTKLASLKD  478

Query  484  IMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNN--KNFST  541
                LE+++       A +L L   K +KLD +AQFG+ FR+T KEE  +R      F  
Sbjct  479  QKELLEQQIHELHKKTAIELDLQVDKALKLDKAAQFGHVFRITKKEEPKIRKKLTTQFIV  538

Query  542  VDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQ  601
            ++ +K+GVKFTN+KL  L ++Y     +Y   Q  +V  +V   + + E  + L  +L++
Sbjct  539  LETRKDGVKFTNTKLKKLGDQYQSVVDDYRSCQKELVDRVVETVTSFSEVFEDLAGLLSE  598

Query  602  LDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYFEKDK  661
            +D ++SFA ++   P PY RP I     G I+L+ SRH CVE QD + FIPND    + K
Sbjct  599  MDVLLSFADLAASCPTPYCRPEITSSDAGDIVLEGSRHPCVEAQDWVNFIPNDCRLMRGK  658

Query  662  QMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKG  721
              F I+TGPNMGGKST+IRQ GVIVLMAQ+G FVPC+ A +SI DCI ARVGAGD QL+G
Sbjct  659  SWFQIVTGPNMGGKSTFIRQVGVIVLMAQVGSFVPCDKASISIRDCIFARVGAGDCQLRG  718

Query  722  VSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFA  781
            VSTFM EMLETASIL+ A+  SLIIIDELGRGTSTYDGFGLAWAI E++     A  +FA
Sbjct  719  VSTFMQEMLETASILKGASDKSLIIIDELGRGTSTYDGFGLAWAICEHLVQVKRAPTLFA  778

Query  782  THFHELTALANQIPTVN-------NLHV--taltteetltMLYQVKKGVCDQSFGIHVAE  832
            THFHELTALA     V+       N HV     T    LTMLY+V+ G CDQSFGIHVAE
Sbjct  779  THFHELTALAQANSEVSGNTVGVANFHVSAHIDTESRKLTMLYKVEPGACDQSFGIHVAE  838

Query  833  LANFPKHVIECAKQKALELEEFQYIGESQGYDIMEPAAKKCYL----EREQGEKIIQEFL  888
             ANFP+ V+  A++KA ELE+F     S   +  E   +K       E  +G +   +FL
Sbjct  839  FANFPESVVALAREKAAELEDFS--PSSMIINNEESGKRKSREDDPDEVSRGAERAHKFL  896

Query  889  SKVKQMPFTEMSEENITIKLKQLKAEV  915
             +   +P  +M  ++   +++++K E+
Sbjct  897  KEFAAIPLDKMELKDSLQRVREMKDEL  923


>gi|6324482|ref|NP_014551.1|  Protein that forms heterodimers, with Msh3p and Msh6p, that bind 
to DNA mismatches to initiate the mismatch repair process; 
contains a Walker ATP-binding motif required for repair activity; 
Msh2p-Msh6p binds to and hydrolyzes ATP; Msh2p [Saccharomyces 
cerevisiae]
Length=964

 Score =  662 bits (1709),  Expect = 0.0
 Identities = 388/966 (40%), Positives = 588/966 (60%), Gaps = 77/966 (7%)

Query  16   EVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIK--YMGPAGAK  73
            E  F + + G+P+KP  T+RL D+GD+YT  G DA+  A  V+ TQ V+K   + P  AK
Sbjct  16   ERNFYKKYTGLPKKPLKTIRLVDKGDYYTVIGSDAIFVADSVYHTQSVLKNCQLDPVTAK  75

Query  74   NLQS----VVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLAYKASPGNLS  129
            N       V +S     + +K  LL   Y+VE+Y          +  W L   ASPGN+ 
Sbjct  76   NFHEPTKYVTVSLQVLATLLKLCLLDLGYKVEIY----------DKGWKLIKSASPGNIE  125

Query  130  QFEDILFGNNDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEA  189
            Q  +++  N D S  I  + V+ ++ DG   +GV ++D+   K+G+ +  DN+ +SNLE+
Sbjct  126  QVNELMNMNIDSSIIIASLKVQWNSQDGNCIIGVAFIDTTAYKVGMLDIVDNEVYSNLES  185

Query  190  LLIQIGPKECVLP----GGETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLL  245
             LIQ+G KEC++        +  +M K+  +I R G ++T  K ++FS KD+  DL +LL
Sbjct  186  FLIQLGVKECLVQDLTSNSNSNAEMQKVINVIDRCGCVVTLLKNSEFSEKDVELDLTKLL  245

Query  246  KGKKGEQMNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIA  305
                G+ + +  LP+  +++++ + +A+I +L+LLS+    G++EL      ++MKLD +
Sbjct  246  ----GDDL-ALSLPQKYSKLSMGACNALIGYLQLLSEQDQVGKYELVEHKLKEFMKLDAS  300

Query  306  AVRALNLFQGSVEDTTGSQSLAA-----------------LLNKCKTPQGQRLVNQWIKQ  348
            A++ALNLF    ++  GS +LA                  LLN CKT  G RL+N+W+KQ
Sbjct  301  AIKALNLFPQGPQNPFGSNNLAVSGFTSAGNSGKVTSLFQLLNHCKTNAGVRLLNEWLKQ  360

Query  349  PLMDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLY  408
            PL + + I +R +LV+  ++  ELRQ L  + L   PD+ RL KK  ++  NL+D  ++Y
Sbjct  361  PLTNIDEINKRHDLVDYLIDQIELRQMLTSEYLPMIPDIRRLTKKLNKRG-NLEDVLKIY  419

Query  409  QGINQLPNVIQAL------EKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQ  462
            Q   ++P ++Q        +       +L+ +V++ PL+      SKF+EM+ETT+D+D 
Sbjct  420  QFSKRIPEIVQVFTSFLEDDSPTEPVNELVRSVWLAPLSHHVEPLSKFEEMVETTVDLDA  479

Query  463  VE-NHEFLVKPSFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGY  521
             E N+EF++K  F+  L ++R  ++ L  ++ S  + +A DLG DP K++KL++    G+
Sbjct  480  YEENNEFMIKVEFNEELGKIRSKLDTLRDEIHSIHLDSAEDLGFDPDKKLKLENHHLHGW  539

Query  522  YFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEI  581
              R+T  + K LR +K +  +   K G+ F+  +L S+  E    + EY++ Q A+V+EI
Sbjct  540  CMRLTRNDAKELRKHKKYIELSTVKAGIFFSTKQLKSIANETNILQKEYDKQQSALVREI  599

Query  582  VNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEK-GQGRIILKASRHA  640
            +NI+  Y    + L+ VLA LD + SFAH S+ AP+PY+RP +     + R  L +SRH 
Sbjct  600  INITLTYTPVFEKLSLVLAHLDVIASFAHTSSYAPIPYIRPKLHPMDSERRTHLISSRHP  659

Query  641  CVEVQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESA  700
             +E+QD+I+FI NDV  E  K  F IITGPNMGGKSTYIRQ GVI LMAQIGCFVPCE A
Sbjct  660  VLEMQDDISFISNDVTLESGKGDFLIITGPNMGGKSTYIRQVGVISLMAQIGCFVPCEEA  719

Query  701  EVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGF  760
            E++IVD IL RVGAGDSQLKGVSTFM E+LETASIL++A+K+SLII+DELGRGTSTYDGF
Sbjct  720  EIAIVDAILCRVGAGDSQLKGVSTFMVEILETASILKNASKNSLIIVDELGRGTSTYDGF  779

Query  761  GLAWAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHV---------taltteetl  811
            GLAWAI+E+IA+KIG F +FATHFHELT L+ ++P V N+HV              +E +
Sbjct  780  GLAWAIAEHIASKIGCFALFATHFHELTELSEKLPNVKNMHVVAHIEKNLKEQKHDDEDI  839

Query  812  tMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEEFQYIGESQGYDIMEPAAK  871
            T+LY+V+ G+ DQSFGIHVAE+  FP+ +++ AK+KA EL++ +   E    D+ +  AK
Sbjct  840  TLLYKVEPGISDQSFGIHVAEVVQFPEKIVKMAKRKANELDDLKTNNE----DLKK--AK  893

Query  872  KCYLEREQG----EKIIQEFLSKVKQMPF-------TEMSEENITIKLKQLKAEVIAKNN  920
                E  +G    + +++E++ KVK+           E S+  I   L+ +  E   +N+
Sbjct  894  LSLQEVNEGNIRLKALLKEWIRKVKEEGLHDPSKITEEASQHKIQELLRAIANEPEKEND  953

Query  921  SFVNEI  926
            +++  I
Sbjct  954  NYLKYI  959


>gi|50290307|ref|XP_447585.1|  hypothetical protein CAGL0I07733g [Candida glabrata CBS138]
Length=957

 Score =  651 bits (1679),  Expect = 0.0
 Identities = 377/894 (42%), Positives = 546/894 (61%), Gaps = 55/894 (6%)

Query  1    MAVQPKETLQLESAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKT  60
            MA    E    + + E GF + +  +PEKP+ TVR+ D+GD+YTA G+DA+  A  V+ T
Sbjct  1    MASNRPELKFSDISEERGFYKRYVKLPEKPSGTVRIVDKGDYYTAVGDDAVFIAENVYHT  60

Query  61   QGVIK--YMGPAGAKNLQS----VVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKE  114
              V+K  ++ PA AK        V +S     S +K  LL    +VE+Y          +
Sbjct  61   MSVLKDCHVDPAVAKQFNEPTKYVTMSLQIVASLLKLCLLDVGNKVEIY----------D  110

Query  115  NDWYLAYKASPGNLSQFEDILFGNNDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLG  174
              W L   ASPGN+ Q  D+L  N D S  I  + ++ +  D    +G+ ++D+   K+G
Sbjct  111  RSWKLIKSASPGNIEQVSDLLNLNIDASIVIASLKIQQNPKDAHVILGLTFIDTSNYKIG  170

Query  175  LCEFPDNDQFSNLEALLIQIGPKECVLP----GGETAGDMGKLRQIIQRGGILITERKKA  230
            + +  DN+ +SNLE+ LIQ+G +EC++P     G T  ++ K+  +I R G ++T    +
Sbjct  171  MMDIIDNEAYSNLESFLIQLGIRECLVPDLSQNGSTNPELKKITNVIDRCGSVVTIVPNS  230

Query  231  DFSTKDIYQDLNRLLKGKKGEQMNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFE  290
            +FS KD+  DL +LL    G  + +  LP+  +Q+A+ + +A++ +L+LLS+    G++E
Sbjct  231  EFSNKDVEVDLAKLL----GNDL-TLTLPQNVSQLALGACNALLNYLQLLSEQEMLGKYE  285

Query  291  LTTFDFSQYMKLDIAAVRALNLF------------QGSVEDTTGSQ--SLAALLNKCKTP  336
            L        MKLD +A++ALNLF             G+V    G++  SL  LLN CKT 
Sbjct  286  LIQHSLESIMKLDSSAIKALNLFPQNNATFFTPMQSGTVGSNGGTKVASLFQLLNNCKTN  345

Query  337  QGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQR  396
             G RL+N+W+KQPL D + I+ R NLVE  ++  ELRQ LQ + L   PD+ RL KK  +
Sbjct  346  SGVRLLNEWLKQPLTDFSGIQVRHNLVEFLIDQLELRQILQTEYLPGVPDIRRLVKKLNK  405

Query  397  QAANLQDCYRLYQGINQLPNVIQALEKHEGKH------QKLLLAVFVTPLTDLRSDFSKF  450
                L+D  ++YQ   ++P++I  +E            ++L+   +  PL +      KF
Sbjct  406  NGT-LEDVLKVYQFSLKVPDIINIIESFLEDDITTTDIKELVRKTWCDPLKEFMEPLKKF  464

Query  451  QEMIETTLDMDQVE-NHEFLVKPSFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGK  509
             EM++TT+D+D  E N+EF+++  F+  L+++RE +  +  ++ +  + AA DLG DP K
Sbjct  465  DEMVQTTVDLDAYEENNEFMIRVEFNEELAKVREQLTAMRDEINAIHLEAAEDLGFDPNK  524

Query  510  QIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkte  569
            ++KL++    G+  R+T  + K LRN+K +  +   K G+ F+  K+  + +E    + +
Sbjct  525  KLKLENHHIHGWCMRLTRNDAKALRNHKQYIELSTVKAGIFFSTRKMKEIAQETVVLQKD  584

Query  570  yeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILE-KG  628
            YE  Q ++VKEIV+I+  Y    + L+ V+A LD + SFAH S+ AP+PYVRP +     
Sbjct  585  YERLQSSLVKEIVSITLTYTPIFEKLSLVIAHLDVLCSFAHASSYAPIPYVRPTMHPLSS  644

Query  629  QGRIILKASRHACVEVQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLM  688
              R  L  SRH  +EVQD++ FI NDV   KD   F IITGPNMGGKSTYIRQ GVI LM
Sbjct  645  DRRTKLMNSRHPVLEVQDDVTFIANDVDMAKDVSEFQIITGPNMGGKSTYIRQVGVITLM  704

Query  689  AQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIID  748
            AQIGCFVPC++AE+SIVD IL RVGAGDSQLKGVSTFM EMLETASIL++AT +SLII+D
Sbjct  705  AQIGCFVPCDNAEISIVDAILCRVGAGDSQLKGVSTFMVEMLETASILKNATSNSLIIVD  764

Query  749  ELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHV------  802
            ELGRGTSTYDGFGLAWAI+E+IA +I  F +FATHFHELT L+ Q+P V N+HV      
Sbjct  765  ELGRGTSTYDGFGLAWAIAEHIAKEIRCFALFATHFHELTNLSEQLPNVKNMHVIAHIDE  824

Query  803  -taltteetltMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEEFQ  855
                     +T+LY+V+ G+ D+SFGIHVAE+  FPK ++  AK+KA ELEE +
Sbjct  825  SEKALNSNDITLLYKVEPGISDRSFGIHVAEVVQFPKKIVSMAKRKANELEELK  878


>gi|63054752|ref|NP_595967.2|  hypothetical protein SPBC19G7.01c [Schizosaccharomyces pombe 
972h-]
Length=982

 Score =  625 bits (1613),  Expect = 2e-177
 Identities = 379/979 (38%), Positives = 566/979 (57%), Gaps = 91/979 (9%)

Query  12   ESAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMGPAG  71
            E   E     F++ MP K T TVR+FDRG+FY A GEDA   A+  + T  V+K+     
Sbjct  11   ERTDEARMFNFYEKMP-KDTNTVRVFDRGEFYVAIGEDASFVAQNAYHTTSVLKHHN---  66

Query  72   AKNLQSVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLAYKASPGNLSQF  131
              N     LS   F  F +D+L     RVE++        S +  + L  +ASPGN+   
Sbjct  67   VSNTSYCNLSPSLFIKFAEDVLSNLAKRVEIW-----GANSAKTGFELLKQASPGNMQML  121

Query  132  EDILFGNN--------DMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQ  183
            ED+L   N        D S S  ++ V       QR +GV ++D I +KLG+ EF D+D 
Sbjct  122  EDLLVSENYQESTAISDSSVSSVLLAVTTRVKQDQRIIGVAFIDPILKKLGVSEFVDSDA  181

Query  184  FSNLEALLIQIGPKECVLP-------GGETA-----GDMGKLRQIIQRGGILITERKKAD  231
            ++N EAL++Q+G KEC++         G +A      ++ +LR II+  G L+T  + ++
Sbjct  182  YTNFEALIVQVGAKECIISQSGHESTNGNSAVSINTAEINRLRNIIEGCGALVTTIRSSE  241

Query  232  FSTKDIYQDLNRLLKGKKGEQMNSAVLPEMENQVAVSSLSAVIKFL--ELLSDD------  283
            FS +D+  +L+++L       +  A++PE+  Q+A++S +A++++L   LL+ D      
Sbjct  242  FSARDVELELSKVLDSP----VTHALVPELGLQLAMASCNALLRYLGPALLNPDMEDDRE  297

Query  284  SNFGQFELTTFDFSQYMKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVN  343
            +   +  L   +  QYM+LDIAAVR+LNL      +   + SL  LLN C+T  G R + 
Sbjct  298  NTSRKLHLYHHNLEQYMRLDIAAVRSLNLLPPPNGNAHKTMSLYGLLNHCRTAMGARNLR  357

Query  344  QWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQED--LLRRFPDLNRLAKKFQRQAANL  401
            +WI QPL+D   IE R +LV A VEDAE RQ L +D  LLR  PD+ +L ++  R +A+L
Sbjct  358  RWIVQPLLDAKSIERRHDLVSALVEDAEARQLLLDDDHLLRSIPDIPKLCRRLTRGSASL  417

Query  402  QDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMD  461
            +D  R+YQ    LP ++  L+    +H+ L+  V+   L +   +  K  E++ETT+D++
Sbjct  418  EDVVRIYQMAKALPKIVTVLDSLTSEHKDLVDKVYTNVLNNHCKNLEKLIELVETTIDLE  477

Query  462  QVENHEFLVKPSFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGY  521
             +++H+++++  FD  L +LR+ +++L+  +         DL  D  K++ L+    +G+
Sbjct  478  ALDSHQYIIRAEFDEELLDLRQRLDELQHSIFEEHKRVGSDLHQDTEKKLHLEQHHLYGW  537

Query  522  YFRVTCKEEKVLR-NNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKE  580
              R+T  E   LR  + +++ +  QKNGV FT  +L SLN  Y  ++  Y   Q+ + +E
Sbjct  538  CLRLTRTEAGCLRGRSSHYTELSTQKNGVYFTTKRLHSLNNSYMDHQKSYRYHQNGLARE  597

Query  581  IVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEK-------GQ----  629
            ++ I++ Y  P++ +  V+A LD ++SFAH S  A +PYVRP I++        GQ    
Sbjct  598  VIKIAATYGPPLEAIGQVIAHLDVILSFAHASTVAVIPYVRPNIVDSSIAQEKHGQSSNI  657

Query  630  ------------------------GRIILKASRHACVEVQDEIAFIPNDVYFEKDKQMFH  665
                                     R+ LK +RH C+E QD++ FIPNDV  E       
Sbjct  658  LDIVSLEDTPNFEEIRRTLENNHCARLYLKQARHPCLEAQDDVKFIPNDVNLEHGSSELL  717

Query  666  IITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTF  725
            IITGPNMGGKSTYIRQ GVI +MAQIGC VPCE A++ I+D ILARVGA DSQLKG+STF
Sbjct  718  IITGPNMGGKSTYIRQVGVITVMAQIGCPVPCEVADLDIIDAILARVGASDSQLKGISTF  777

Query  726  MAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFH  785
            MAEMLETA+ILR+AT  SLIIIDELGRGTST DGFGLAWAI+E+I T+IG FC+FATH+H
Sbjct  778  MAEMLETATILRAATPRSLIIIDELGRGTSTTDGFGLAWAITEHIVTQIGCFCLFATHYH  837

Query  786  ELTALANQIPTVNNLHV---taltteetltMLYQVKKGVCDQSFGIHVAELANFPKHVIE  842
            E+T L+ +I TV NLHV      +  + + +LY V +G  D+SFGIHVA+LA+FP  +IE
Sbjct  838  EMTKLSEEITTVKNLHVTAYVGDSESKDVALLYNVCEGASDRSFGIHVAKLAHFPPKIIE  897

Query  843  CAKQKALELEEFQYIGESQGYDIMEPAAKKCYLEREQGEKIIQEFLSKVKQMPFTEMSEE  902
             A  KA ELE       +QG D  E  +KK      +G  I+++ + + +     EM+++
Sbjct  898  MASNKAAELEAED--SGAQG-DTQEVKSKK------EGMAIVRDIMRQWRSNVKPEMTQQ  948

Query  903  NITIKLKQLKAEVIAKNNS  921
             +  + +++      + NS
Sbjct  949  QMMDQFQKVIGSFAQQINS  967


>gi|50554795|ref|XP_504806.1|  hypothetical protein [Yarrowia lipolytica]
Length=887

 Score =  614 bits (1584),  Expect = 3e-174
 Identities = 373/929 (40%), Positives = 558/929 (60%), Gaps = 58/929 (6%)

Query  11   LESAAEVGFVRFFQGMPEKPTT-----TVRLFDRGDFYTAHGEDALLAAREVFKTQGVIK  65
            ++   E     F++G+ E+        T+R+F+R D Y   G DA   A  V++T   +K
Sbjct  8    IDKTEERSLTAFYKGLEEREEPCDNGGTIRVFERPDGYVLFGVDARYVAERVYRTLTALK  67

Query  66   YMGPAGAKNLQSVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLAYKASP  125
                      + V ++   F++F++D LL    +VE+Y    G        W +    SP
Sbjct  68   TTD----LKQEYVTIATSGFQNFLRDALLNYGLKVEIYGKVDGK-------WRMTSWGSP  116

Query  126  GNLSQFEDILFGNNDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFS  185
            GNLSQ ED++ G   ++ +   + VK         VG+ +VD     LG+ EF DN+  S
Sbjct  117  GNLSQVEDLMSGQ--LNTNPVAIAVKTQG----DTVGLAFVDLNNHVLGVSEFEDNECMS  170

Query  186  NLEALLIQIGPKECVLPGGETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLL  245
            NLE+LLIQ+  KEC+     T+ D  K++ +I+R G+  T+ K + F+  ++  +L+ LL
Sbjct  171  NLESLLIQLDVKECI-----TSDD--KVKAVIERAGVSRTDAKSSWFNANEVESNLDNLL  223

Query  246  KGKKGEQMNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIA  305
              K          PE+  + A+ SL+ +IK+L L SD SN G F + T   SQYMKLD +
Sbjct  224  AEKL-----QPTSPELSLKNALGSLACLIKYLSLTSDASNHGAFTIKTHTLSQYMKLDAS  278

Query  306  AVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEA  365
            A++AL+L   SV+D+T S SL  LLN CKT  G R + QW+KQPLMDK  IE+R  +VE 
Sbjct  279  ALKALHLMP-SVKDSTKSSSLYGLLNVCKTATGSRTLAQWVKQPLMDKQEIEKRHEIVEI  337

Query  366  FVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHE  425
            F   ++L ++++++L    PDLNRL +KF RQAA+L+D  R+YQ +  LP++   L   +
Sbjct  338  FTS-SDLLESIRQNL-STIPDLNRLTRKFMRQAASLEDVVRVYQMVATLPHIASGLRAAQ  395

Query  426  GKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIM  485
             +   LL   F+T L  + +   KF+E++E+T+D++ +++HEF++ P  +  L++ +  +
Sbjct  396  SE---LLEETFLTQLDSIITGLQKFEELVESTIDLNSIDSHEFMINPDMEEGLNDTKARL  452

Query  486  NDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQ  545
               + +M+    S + +LG++  K++K ++    G+ FR+T  +   LR    F  +   
Sbjct  453  EACQDRMKDIFASVSDELGMEMDKKLKFENHHVHGWSFRLTRTDASCLRGLSKFKELATL  512

Query  546  KNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAV  605
            K G+ FT ++L SL+ E+T    EY++ Q  + KEI+ I+  Y   ++  + VL QLD +
Sbjct  513  KAGIIFTTNELRSLSNEFTDLSQEYKKIQARLAKEIIEIACSYCPLLERCSAVLGQLDVL  572

Query  606  VSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYFEKDKQMFH  665
             SFA V+      Y+RP +++    + IL ASRH C+E QD   FIPNDV+  +D + F 
Sbjct  573  TSFASVA--IERNYIRPTVVDSDDRKCILTASRHPCLEAQD--TFIPNDVHLGQDSKKFL  628

Query  666  IITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTF  725
            +ITGPNMGGKST+IRQ GVIVLM QIGCFVPC+ AE+SI DCILARVGAGDSQLKG+STF
Sbjct  629  VITGPNMGGKSTFIRQVGVIVLMNQIGCFVPCDRAEISIFDCILARVGAGDSQLKGLSTF  688

Query  726  MAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFH  785
            M+EMLET++IL+SAT  SLIIIDELGRGTSTYDGFGLAWAISE+I  K+  F MFATHFH
Sbjct  689  MSEMLETSAILKSATDKSLIIIDELGRGTSTYDGFGLAWAISEHI-VKMNCFSMFATHFH  747

Query  786  ELTALANQIP-TVNNLHV--taltteetltMLYQVKKGVCDQSFGIHVAELANFPKHVIE  842
            ELT LA + P  V+NLHV      + + +T+LY+V  GV  +S+G HVAE+  FP  V+ 
Sbjct  748  ELTELAKEHPDRVDNLHVAAHVGESSDDITLLYKVVPGVSSKSYGTHVAEVVKFPTKVVN  807

Query  843  CAKQKALELEEFQYIGESQGYDIMEPAAKKCYLEREQGEKIIQEFLSKVK-QMPFTEMSE  901
             AK+KA EL++     + + Y   +  A         G K+++E L++ K Q+   E+  
Sbjct  808  MAKRKAQELDDVNSGTQGKKYASEDLVA---------GNKLLKEILTEWKSQIKGDEVDG  858

Query  902  ENITIKLKQLKAEVIAKNNSFVNEIISRI  930
             +  +K    K +   + N F+N+ ++ +
Sbjct  859  ASQLLKTVVDKYKTQMEQNVFINDALASL  887


>gi|50310365|ref|XP_455202.1|  unnamed protein product [Kluyveromyces lactis]
Length=956

 Score =  611 bits (1576),  Expect = 3e-173
 Identities = 360/886 (40%), Positives = 547/886 (61%), Gaps = 58/886 (6%)

Query  14   AAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIK--YMGPAG  71
            A E GF + F  +P++   T+RL D+ D+Y   G+DAL  A +V+ T  V+K   + P+ 
Sbjct  13   AEERGFYKRFLQLPQRSQNTIRLVDKSDYYIVVGDDALFVADQVYHTSSVLKDCKIDPST  72

Query  72   AKN------LQSVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLAYKASP  125
             +       L+ V +S     + +K  LL    ++E+Y          + +W L   ASP
Sbjct  73   LRQFDLQEPLKYVTMSIQIVGNLLKTSLLELGKKIEIY----------DRNWKLLKTASP  122

Query  126  GNLSQFEDILFGNNDMSASIGVVGVKMS----AVDGQRQVGVGYVDSIQRKLGLCEFPDN  181
            GNL Q +D++ G+  +  +I +  +K++    A      +GV +VD+   ++GL +  DN
Sbjct  123  GNLEQVDDLIVGS--VETNIVLASLKLNFNGTAASNYCTIGVSFVDNTNYRIGLFDLLDN  180

Query  182  DQFSNLEALLIQIGPKECVLP----GGETAGDMGKLRQIIQRGGILITERKKADFSTKDI  237
            + FSNLE+ LIQ+G KEC++P        A D+ K+  +I R   + +  K +DF+ KD+
Sbjct  181  EVFSNLESCLIQLGIKECLIPDLRDNPSMANDLKKILSVIDRCSCVASFVKPSDFNGKDV  240

Query  238  YQDLNRLLKGKKGEQMNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFS  297
              DL +L     G++++ +V     N   + + S ++ +L ++++++N G FE+     S
Sbjct  241  EADLAKLC----GDELSLSVSKFSAN--CLGACSVLLNYLNIMNNEANVGNFEVVDHSLS  294

Query  298  QYMKLDIAAVRALNLF----QG-----SVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQ  348
            Q++KLD +A++ALN+F    QG     SV       SL  LLN+CKT  G RL+N+W+KQ
Sbjct  295  QFVKLDASAIKALNVFPTGSQGNTALLSVGSPQKCSSLFQLLNRCKTNSGVRLLNEWLKQ  354

Query  349  PLMDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLY  408
            PL D ++I +R +LVE F++  ELR +LQE+ L   PD+ RL KK Q+   NL+D  ++Y
Sbjct  355  PLTDIDQITKRHDLVEFFMDQLELRSSLQEECLPSVPDIRRLTKKLQKNG-NLEDVLKIY  413

Query  409  QGINQLPNVIQALEKHEGKHQK-----LLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQV  463
            Q    +P +   L++   +        L+  V + P+ +  +   K +E++ETT+D++  
Sbjct  414  QFAQMVPVISDLLKQKTEEVDSNDLMILVKEVLLDPMLENANPLEKLKELVETTVDLEAY  473

Query  464  EN-HEFLVKPSFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYY  522
            E  +EF++K  F+  LS +R  +++L+  +++  +  A DLG DP K++KL++    G+ 
Sbjct  474  EETNEFMIKVEFNEQLSIIRTHLDELKDAIRTIHLDTADDLGFDPEKKLKLENHHLHGWC  533

Query  523  FRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIV  582
             R+T  + K LR +K +  +   K G+ F+  +L ++ EE ++ + +YE+ Q ++VKEIV
Sbjct  534  MRLTRNDAKALRQHKKYIELSTVKAGIFFSTKELKNIAEETSELQKKYEQQQASLVKEIV  593

Query  583  NISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILE-KGQGRII-LKASRHA  640
            +I+  Y   ++ L+ V AQLD + SFA VS+ AP+PYVRP +     Q R   L ASRH 
Sbjct  594  SITLSYTPVLEKLSVVTAQLDILCSFAQVSSYAPIPYVRPKMYPLNDQNRTTELIASRHP  653

Query  641  CVEVQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESA  700
             VE+QD++ FI NDV   +    F +ITGPNMGGKSTYIRQ GVI LMAQIGCFVPC+ A
Sbjct  654  IVEMQDDVTFISNDVKLVQGDSEFIVITGPNMGGKSTYIRQIGVICLMAQIGCFVPCDEA  713

Query  701  EVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGF  760
            +++ VD IL RVGAGDSQLKGVSTFM EMLETASIL++AT +SL+I+DELGRGTSTYDGF
Sbjct  714  KIAAVDAILCRVGAGDSQLKGVSTFMMEMLETASILKNATHNSLVIVDELGRGTSTYDGF  773

Query  761  GLAWAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHV------taltteetltML  814
            GLAW+ISE+IAT I  F +FATHFHELT LA+++  V+N+HV            + +T+L
Sbjct  774  GLAWSISEHIATNINCFTLFATHFHELTTLADKLDNVSNMHVVAHIEDNGSHNSDDITLL  833

Query  815  YQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEEFQYIGES  860
            Y+V+ G  DQSFGIHVAE+  FP  ++  AK+KA ELE+ +   +S
Sbjct  834  YKVEAGSSDQSFGIHVAEVVQFPSKIVNMAKRKAAELEDLKKDNDS  879


>gi|62471629|ref|NP_001014482.1|  spellchecker1 CG4215-PC, isoform C [Drosophila melanogaster]
Length=752

 Score =  578 bits (1490),  Expect = 3e-163
 Identities = 318/738 (43%), Positives = 467/738 (63%), Gaps = 23/738 (3%)

Query  8    TLQLESAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHG-EDALLAAREVFKTQGVIKY  66
            TL +++ A   F++F   + EKP TTVR FD  D YT HG +D  L A+ V+K+   I  
Sbjct  13   TLNMDTNARRNFIKFHAKLGEKPATTVRFFDHTDRYTVHGSDDCELVAKIVYKSTAFIGA  72

Query  67   MGPAGAKN-LQSVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLAYKASP  125
            + P   K  LQ V +SK NFE  V++LLLVR YRVEVY           +DW + Y+ SP
Sbjct  73   LLPDDKKETLQFVSMSKGNFELAVRELLLVRNYRVEVY-------VKNSSDWEIEYRGSP  125

Query  126  GNLSQFEDILFGNNDMSASIGVVG--VKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQ  183
            GNL QFEDILF N ++     ++   VK+    GQR+VGV  V+    K  L EF D+D 
Sbjct  126  GNLLQFEDILFSNKEVLVGNSIISLLVKLDG-GGQRRVGVASVEQNDCKFQLLEFLDDDF  184

Query  184  FSNLEALLIQIGPKECVLPGGETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNR  243
            F+ LEA ++ +GPKEC+LP  E  G+   ++ ++ R G++IT  KK+     D+ QDLNR
Sbjct  185  FTELEATVVLLGPKECLLPSIE--GEYSAVKTLLDRNGVMITMPKKS--GDNDLLQDLNR  240

Query  244  LLKGKKGEQMNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLD  303
            LL+  KG+Q ++  L E++ Q+A ++L   IK+L+L++D  N G +E+   D ++++ LD
Sbjct  241  LLRFAKGQQEDATGLKELQLQLASNALKTAIKYLDLVNDAGNLGHYEIKQLDLNRFVHLD  300

Query  304  IAAVRALNLF-QGSVEDTTGS---QSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEER  359
             AAV ALN+  +     +  S   QS+  +L+ C+TPQG RL+ QW+KQPL  +N + +R
Sbjct  301  SAAVAALNIMPKPGTHPSMPSYRWQSVLGVLDHCRTPQGHRLMGQWVKQPLRSRNILNDR  360

Query  360  LNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQ  419
             N+V+  +E  +  +TL  D L+R PD+  L KK  R+ ANLQD +R+YQ I + P +++
Sbjct  361  HNIVQCLLESPDTMETLSLDYLKRIPDILMLTKKLMRRKANLQDLFRIYQVILRTPKILK  420

Query  420  ALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLS  479
             L + +      + +V   P      D +  ++M+E  +D + +E  E+LVK SFD  L 
Sbjct  421  VLHELDNS---TIESVICAPFKSFLKDLTGLKQMVEQVVDFEAIERGEYLVKASFDSRLM  477

Query  480  ELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNF  539
            EL+++M +L  KM+      +++L LD   Q+KL+S A+ G++FR+T K++ VLR NKN+
Sbjct  478  ELQQMMTELYSKMEELQFKCSQELNLDGKNQVKLESVAKLGHHFRITVKDDSVLRKNKNY  537

Query  540  STVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVL  599
              VD+ K GV+FT+ KL    +E+   +T YEE Q +IV+EI++++ GY  P+  LN+ L
Sbjct  538  RIVDVIKGGVRFTSDKLEGYADEFASCRTRYEEQQLSIVEEIIHVAVGYAAPLTLLNNEL  597

Query  600  AQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYFEK  659
            AQLD +VSFA  +  AP PYVRP +LE+G   ++L+  RH C+E+Q+ + FI N V F+K
Sbjct  598  AQLDCLVSFAIAARSAPTPYVRPKMLEEGARELVLEDVRHPCLELQEHVNFIANSVDFKK  657

Query  660  DKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQL  719
            ++    IITGPNMGGKSTYIR  G  VLMA IG FVPC  A +S+VD IL RVGA D+ +
Sbjct  658  EECNMFIITGPNMGGKSTYIRSVGTAVLMAHIGAFVPCSLATISMVDSILGRVGASDNII  717

Query  720  KGVSTFMAEMLETASILR  737
            KG+STFM EM+ET+ I+R
Sbjct  718  KGLSTFMVEMIETSGIIR  735


>gi|68481114|ref|XP_715472.1|  hypothetical protein CaO19_10605 [Candida albicans SC5314]
 gi|68481255|ref|XP_715402.1|  hypothetical protein CaO19_3093 [Candida albicans SC5314]
Length=873

 Score =  497 bits (1280),  Expect = 6e-139
 Identities = 358/937 (38%), Positives = 523/937 (55%), Gaps = 97/937 (10%)

Query  14   AAEVGFVRFFQGMPEKPTTTVRLFDRG--DFYTAHGEDALLAAREVFKTQGVIKYMGPAG  71
            A E  + + +  +P K +TT+R  D    D++TA G DA L A ++++TQ VIK+     
Sbjct  14   ADERSYFKKYSQLPPKESTTIRFIDHNNHDYFTALGSDADLIAEKIYRTQSVIKHHNQT-  72

Query  72   AKNLQSVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLAYKASPGNLSQF  131
                + V +S  NF+  + +  L   ++VEVY ++          + L    + GNL   
Sbjct  73   ----KYVTISPQNFKESL-NYCLQNHFKVEVYHSKT---------FQLISSGTAGNLDSL  118

Query  132  E---DILFGNNDMSASIGVVGVKMSAVDGQRQVGVGYV-DSIQRKLGLCEFPDNDQFSNL  187
                DI F   D S+S       ++A+    +VGV  + DSI   + L EF DN+ +SNL
Sbjct  119  SEEFDIDFDFRDGSSS------SIAAIKLGNKVGVCVIADSI---VHLSEFEDNELYSNL  169

Query  188  EALLIQIGPKECVLPGGETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLKG  247
            E+LLIQ+G KE V+P      D  K  Q++++   L+    K+    KD  QD+++LL  
Sbjct  170  ESLLIQLGVKEVVIPANV---DNKKFFQMLEKLNDLVVSAAKS--FPKDNEQDISKLLDT  224

Query  248  KKGEQMNSAV-LPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAA  306
            +  E   +A  +  ++  +A+S   A+I +L+LL+ D  F   E+  ++ S +MKLD + 
Sbjct  225  ENLELSLAAKGINSLDYALALSCCGALIDYLDLLNGDKTF---EINKYNLSTFMKLDSST  281

Query  307  VRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAF  366
            ++ALN+     +    S      L KCKT  G RL++QW+KQPL+D + IEER  LV+A 
Sbjct  282  MKALNILPNGTQKAITS---IFELFKCKTLGGSRLLSQWLKQPLIDLSLIEERQELVKAM  338

Query  367  VEDAELRQTLQEDLLRRFPDLNRLAKKF----QRQAAN---LQDCYRLYQGINQLPNVIQ  419
            ++D  LR  +QE  L + PD+NRL KK     +R  A    L +   LYQ ++ LPN+ +
Sbjct  339  IDDTSLRVEIQE-FLSKVPDINRLLKKIGLGVKRSGAENKKLNEVVNLYQLVSLLPNLTE  397

Query  420  ALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLS  479
             L           +  +  PL       SKF E++ETT+D+D   + ++ +KP FDP+LS
Sbjct  398  ILT----------IDYYAKPLKKDEQALSKFCELVETTIDLDTSFDKDYKIKPDFDPSLS  447

Query  480  ELREIMNDLEKKMQSTLISAARDLGLDPGK-QIKLDSSAQFGYYFRVTCKEEKVLRNNKN  538
            E+   M    K +    + A  DL LD    ++KL+     G+  RVT  + +VLR    
Sbjct  448  EISNNMESAFKAINDLYLEAGDDLNLDTASNKLKLEQHQTHGWCMRVTRNDSRVLRGKSQ  507

Query  539  FSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDV  598
            +  +   K+GV FT  ++  L++EYTK   EY   Q  ++KEI++++  Y   +Q+L+  
Sbjct  508  YKELQTVKSGVFFTTIEMKRLSQEYTKAYDEYNVKQSEVIKEILSLTLTYEPVLQSLSST  567

Query  599  LAQLDAVVSFAHVSNGAPVPYVRPAILE-KGQGRIILKASRHACVEVQDEIAFIPNDVYF  657
            LA LD +  FA  +      Y +P +   +   +I L  SRH  +EVQD+I FI NDV  
Sbjct  568  LAHLDVITCFA--TTAMLNSYTQPKLFPFESSRKINLIESRHPLLEVQDDINFISNDV--  623

Query  658  EKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPC-ESAEVSIVDCILARVGAGD  716
            + D + F IITGPNMGGKSTYIRQ G I LMAQ+G F+P  + AE+ I D IL+RVGAGD
Sbjct  624  KMDDKHFAIITGPNMGGKSTYIRQIGTIALMAQVGSFIPANDGAELPIFDAILSRVGAGD  683

Query  717  SQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGA  776
            SQLKG+STFM EMLET+SIL +AT +SLIIIDELGRGTSTYDGFGLAWAISE +  K   
Sbjct  684  SQLKGLSTFMIEMLETSSILATATANSLIIIDELGRGTSTYDGFGLAWAISEEL-IKRKC  742

Query  777  FCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANF  836
            F +FATHFHEL+ L+ +   V NL++ A  T E +T++Y+V  G+ + SFGI VAE  + 
Sbjct  743  FAVFATHFHELSQLSEKYDGVENLNLMAEQTNEDITLIYKVGPGISNTSFGISVAEKLHM  802

Query  837  PKHVIECAKQKALELEEFQYIGESQGYDIMEPAAKKCYLERE--QGEKIIQEFLSKVKQM  894
            P+ ++  AK+K  EL E             EP  KK   E E  +G   ++E L + +  
Sbjct  803  PEKIVNMAKRKVEELSE-------------EPPIKKQCSETEVREGMSRLREILKEWRNN  849

Query  895  PFTEMSEENITIKLKQLKAEVIAKN-NSFVNEIISRI  930
            P     E NI        A+ +AK  N F+N I+  +
Sbjct  850  P-----EINI--------ADSLAKEPNKFINYIVDTL  873


>gi|50405181|ref|YP_054273.1|  DNA mismatch repair protein Msh2, putative [Paramecium tetraurelia]
Length=794

 Score =  471 bits (1212),  Expect = 5e-131
 Identities = 282/809 (34%), Positives = 466/809 (57%), Gaps = 38/809 (4%)

Query  140  DMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPK--  197
            D   ++  + V++   + +R +   ++D  +R + +CEF DN+ FS  E L++Q+ P   
Sbjct  2    DQDQNLLTLVVQIIYTNNERHLNCAFLDQDRRMIEVCEFQDNEHFSVFECLVLQVNPNGQ  61

Query  198  ----ECVLPGGETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLKGKKGEQM  253
                  ++   E   +  K+R I+++    + E+ K DFS  ++  +LN++LK    +  
Sbjct  62   DAKLTVLIQMPELESENRKVRDILEQCEFEVIEKNKKDFSEINL-SNLNKVLK----KNF  116

Query  254  NSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLF  313
            N+     +E Q+    +  +++   L  DD+N  +F +   +  ++M+LD+AA+ AL +F
Sbjct  117  NTC---RVEEQICTQCIQCLLEHTRLYKDDTNTQKFNIGLLNLHKFMRLDLAAINALMIF  173

Query  314  --QGSVEDTTGSQS--LAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVED  369
              QG  +  +G+ +  L   L++C T  G+R + +WIK PL     I +RLN+VE   ++
Sbjct  174  PKQGIKQFDSGNNASTLVDYLDRCITQMGKRCLRRWIKMPLQSIQEINQRLNIVEYLYQN  233

Query  370  AELRQTLQEDLLRRFPDLNRLAKKF------QRQAANLQDCYRLYQGINQLPNVIQALEK  423
            +  RQ L ED L+R PDL++L  KF      +R  ANL DC ++YQ I ++ ++I+ + +
Sbjct  234  SSFRQFLNEDFLKRIPDLDKLYAKFYKVASDKRNNANLSDCVKVYQLIQKIKDIIKRVNQ  293

Query  424  HEGKHQKLLLA-VFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELR  482
               + Q  +L  +F+ P  +  SDF K +EMIE ++D+ +    EF+V P F   L +L 
Sbjct  294  EMYQSQNSILQEIFLKPFEENLSDFEKLEEMIEKSIDLSKAYTGEFIVNPRFSEKLMQLS  353

Query  483  EIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCK--EEKVLRNNKNFS  540
            + +      +++  +    +LG+     + L  S  + Y F    +  +E   +N K + 
Sbjct  354  KNITQCMNDIENVRLDTETELGIT----VTLIESGTYTYIFEAKKQSADEAFRKNPKKYK  409

Query  541  TVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLA  600
            T+ ++   + FT  KL S   +Y   +  Y+E Q   V+EI+ I   Y   M+  + +++
Sbjct  410  TISVKNRALTFTVEKLQSTVADYVHFRDLYQEVQQEKVQEILKIVCSYYPVMEQASRLIS  469

Query  601  QLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYFEKD  660
            ++D + +FA V+  AP  +VRP   EK +  I+LK SRH  +E  D    + ND+  ++ 
Sbjct  470  EIDVLSAFASVARNAPRAFVRPIFTEKKE--ILLKESRHPLLEAIDSTCIV-NDLEMDRK  526

Query  661  KQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLK  720
                HIITGPNMGGKSTYIRQ  + VL+A IGCFVPC +A V ++D I+ RVGA D Q K
Sbjct  527  SSRLHIITGPNMGGKSTYIRQIAICVLLAHIGCFVPCTTAVVPVIDAIITRVGASDVQTK  586

Query  721  GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMF  780
            G+STFM+EMLE + +L++A  DSLIIIDELGRGTST +GFG+AWAI+E+IA +I ++C+F
Sbjct  587  GISTFMSEMLEASCMLKTAKPDSLIIIDELGRGTSTSEGFGIAWAIAEHIAKQIQSYCLF  646

Query  781  ATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKHV  840
            ATHFHE+T + ++I  V N +V+ +T ++ +TM Y+V+ G  D+S+G+ VA++  FPK V
Sbjct  647  ATHFHEMTLMEHEITGVKNYYVSCVTEDDKITMEYRVRYGAVDRSYGLLVAQMLKFPKEV  706

Query  841  IECAKQKALELEEFQYIGESQGYDIMEPAAKKCYLEREQGEKIIQEFL-SKVKQMPFTEM  899
            I+ AKQKA+ELE F++  ES   D   P      ++ E   K+    L +K + +   E 
Sbjct  707  IDDAKQKAIELETFEHNLESNFIDEEVPIFNN--IDDELQYKVRNSTLQAKERVIKEAEK  764

Query  900  SEENIT-IKLKQLKAEVIAKNNSFVNEII  927
             +  +T  K  Q + E+I K    + +++
Sbjct  765  WKNELTNEKNPQKRKEIIEKRKQIILKLL  793


>gi|50428976|ref|XP_457639.1|  unnamed protein product [Debaryomyces hansenii CBS767]
Length=809

 Score =  451 bits (1160),  Expect = 5e-125
 Identities = 298/813 (36%), Positives = 455/813 (55%), Gaps = 83/813 (10%)

Query  12   ESAAEVGFVRFFQGMPEKPTTTVRLFDRG--DFYTAHGEDALLAAREVFKTQGVIKYMGP  69
            ++  E  + R +  +P K +TT+R+ D    D++TA  EDA L A  ++KTQ V+KY   
Sbjct  12   DTGDERQYYRKYSNLPPKESTTIRIIDHNNKDYFTALDEDADLIADNIYKTQSVVKYNQT  71

Query  70   AGAKNLQSVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLAYKASPGNLS  129
               KN    +  ++   + ++  L+   Y+VE+Y ++          + +   A+PGNL 
Sbjct  72   H--KNKYVTISPQVFTNNVLRFCLIDNNYKVEIYNSKT---------FQIVTMATPGNLE  120

Query  130  QFEDILFGNN------DMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQ  183
               +  +G N      D S+ + + G+K   V   +++G+  +D +   + + EF DND 
Sbjct  121  NLSNE-YGINLENMIKDFSSPM-IAGIKYQQVGSLKKIGICLIDLLNNNIQVSEFDDNDL  178

Query  184  FSNLEALLIQIGPKECVLPGGETAGDMG----KLRQIIQR-GGILITERKKADFSTKDIY  238
            FSNLE+LL+Q+G KE +LP      D      KL Q++ + GGI+I+  K + F+ KDI 
Sbjct  179  FSNLESLLLQLGVKEVILPSNYDPQDENNEVIKLYQVLDKIGGIVISSVKSSLFTNKDIE  238

Query  239  QDLNRLLKGKKGEQ-----MNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTT  293
            QDL + +            + S  +  +E  ++ S  +A++ +L+L + +S    F +  
Sbjct  239  QDLGKFITTTNEANNIEVVLGSKGISSIEYSLSFSCCNALLHYLDLFTQESP--NFTIDK  296

Query  294  FDFSQYMKLDIAAVRALNLF-------QGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWI  346
            ++ S +MKLD++ ++ALN+F          +  ++   S+  LLNKCKT  G RL++QW+
Sbjct  297  YNLSSFMKLDLSTMKALNIFPTQSSSSNNLITKSSNVTSIFELLNKCKTSVGSRLLSQWL  356

Query  347  KQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQR--------QA  398
            KQPL +   I ER  LV   +ED  LR  L +D L + PD+ RL KK           + 
Sbjct  357  KQPLTNLVEINERHLLVNHLMEDTNLRVFLSQDWLPQIPDVKRLLKKISNGIKKTVGNEN  416

Query  399  ANLQDCYRLYQGINQLPNVIQAL-----EKHEGKHQKLLLAVF-VTPLTDLRSDFSKFQE  452
              L+D  RLYQ +  LP +I  L     E++ G   KLL+  + + P++       K+QE
Sbjct  417  KKLEDVIRLYQLVLVLPQLIDHLSNIVGEENNGDDVKLLIKKYWLDPVSKNYESLIKYQE  476

Query  453  MIETTLDMDQVE--------NHEFLVKPSFDPNLSELREIMNDLEKKMQSTLISAARDLG  504
            ++ETT+D+  +E        N +F +KP FD +L  + + +      +++  I  + DLG
Sbjct  477  LVETTIDLSPLESSSAHDLLNTDFNIKPEFDESLIAINDNLQATLSNIKNCHIEVSEDLG  536

Query  505  LDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNN-KNFSTVDIQKNGVKFTNSKLTSLneey  563
            ++  K++KL+   Q G+ FRVT  +  VLRN   N+  +   K GV FT+  L SL+E+Y
Sbjct  537  IELEKKLKLEKHQQHGWCFRVTRNDSSVLRNTGNNYIELQTVKAGVFFTSKSLRSLSEKY  596

Query  564  tknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPA  623
             +   EY   Q  ++KEI++I+S Y     +L+  L  LD + SFA+V+  AP+PYV+P 
Sbjct  597  QEFSGEYNSKQRELIKEILSITSTYQLVFTSLSLTLGHLDVLASFANVAIFAPIPYVKPM  656

Query  624  IL---------EKGQGRIILKASRHACVEVQDEIAFIPNDVYF-------EKDKQMFHII  667
            +          E  Q +I L+ +RH  +EVQD+I FI NDVY        +   + F II
Sbjct  657  LHPLSSSIESDEHKQRKIKLEEARHPVLEVQDDINFIANDVYLSTPNAEADSKGKPFVII  716

Query  668  TGPNMGGKSTYIRQTGVIVLMAQIGCFVPCE----SAEVSIVDCILARVGAGDSQLKGVS  723
            TGPNMGGKSTYIRQ GVI LM+Q+G FVP      + E+ I D IL+RVGAGDSQLKG+S
Sbjct  717  TGPNMGGKSTYIRQVGVIALMSQVGSFVPASEDSSAPEIPIFDAILSRVGAGDSQLKGLS  776

Query  724  TFMAEMLETASILRSATKDSLIIIDELGRGTST  756
            TFM EMLET+SIL +AT +SLII+DELGRGTST
Sbjct  777  TFMIEMLETSSILATATHNSLIIVDELGRGTST  809


>gi|71665822|ref|XP_819877.1|  DNA mismatch repair protein MSH2 [Trypanosoma cruzi strain CL 
Brener]
Length=960

 Score =  423 bits (1088),  Expect = 1e-116
 Identities = 310/964 (32%), Positives = 490/964 (50%), Gaps = 86/964 (8%)

Query  16   EVGFVRFFQGMPEKPTTTVRLFDRGDFYTAH---GEDALLAAREVFKTQGVIKYMGPAGA  72
            +V  ++ F  +       VRLF RG         G  A   ARE  ++  V+K  G    
Sbjct  6    DVSVLQAFTAVGGDDKACVRLFSRGGSTPGCYVLGSWAGFIAREYIRSTAVLKNWG----  61

Query  73   KNLQSVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLAYKASPGNLSQFE  132
              +  VV++    +  ++D LL R   VE Y+   G        +    + SPGN++ FE
Sbjct  62   -GVDVVVVNDSIAKEVIRDCLLRRGASVEYYERPPGG-----GTYACVQRGSPGNITDFE  115

Query  133  DILFGNNDMSASIGVVGVKM------------SAVDGQRQVGVGY--VDSIQRKLGLCEF  178
              LF   +    +   G  +              + G + + VG+  +++  R L   E+
Sbjct  116  ATLFSFEEAEIQLMATGAIVLEKNNTSGNAGKCMISGGQGIRVGFAALNTTLRTLIYAEY  175

Query  179  PDNDQFSNLEALLIQIGPKECVL-------------PGGETAGDMG----------KLRQ  215
             D  Q ++L+AL+ Q   KE +               GG  AG  G           ++Q
Sbjct  176  LDTLQLTSLDALMAQCNLKELIYLDRSRCRISSNSNKGGGAAGVAGGSGREEESLRAVKQ  235

Query  216  IIQRGGILITE------RKKADFSTKDIYQDLNRLLKGKKGEQMNSA--VLPEMENQVAV  267
            + +R  I   E          D   K +     R     KG+ +++   +L   E+++A+
Sbjct  236  LCERANITYRELGHNGAAPSHDSPQKPLQPQGRREGNVTKGDFLSALEDILRVPEDRLAL  295

Query  268  SSLSAVIKFLELLS-------DDSNFGQFELTTFDFSQYMKLDIAAVRALNLFQGSVEDT  320
            S+     + +E L        D +N   F L     S +MKLD AA++AL++     E  
Sbjct  296  SNCPLASRAIEYLVSNIIDNFDATNHRAFYLKHTISSTFMKLDTAAIQALHIIHQKPE-A  354

Query  321  TGS--QSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQE  378
             GS   S+ + LN+C T  G R++ QW+ QPL +   I +RL+LVE  VED+ LR  L  
Sbjct  355  RGSLPTSVYSWLNRCVTGMGSRMMRQWLLQPLRNAEEINQRLSLVELMVEDSILRDALLS  414

Query  379  DLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEG-KHQKLLLAVFV  437
             +LR   D++RL +K QR++  L+D   +   +N +P  +Q L  H+G ++ KLL+  ++
Sbjct  415  QVLRCCGDMDRLNRKLQRRSIALKDLQSILTFVNTIPRAVQVLRTHQGGRNDKLLMDEYI  474

Query  438  TPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIMNDLEKKMQSTLI  497
             PL D+   FS  + +I  T+D+   + +   + P FD  L EL E    + K ++S   
Sbjct  475  APLEDINEHFSNLRILITATVDLS--DENTTRINPEFDDELMELEEQRKSVVKAIESEHQ  532

Query  498  SAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLT  557
               +  G    KQ+K +    +GY FRVT KE++ +R +K   TV   K+GV+F + +L+
Sbjct  533  RVMKVYGWTE-KQLKCEYHTTYGYVFRVTRKEDQQVRTSKELITVSTSKDGVRFVSERLS  591

Query  558  SLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPV  617
            SL+E+Y   +  Y+  Q  + +++V+    Y+  +    +++A LD  V++A V   +P 
Sbjct  592  SLSEQYKGIRKVYDVRQQDLKQKLVSTVVTYLPVLDDAKELIAALDVFVAWATVVRDSPH  651

Query  618  PYVRPAIL--------EKGQGRIILKASRHACVEVQDEIAFIPNDVYFEKDKQMFHIITG  669
            P VRP I         E  +  I L   RH  VE++  + + PN ++   D     IITG
Sbjct  652  PMVRPTIRTPETEEEQEGNKSLITLLNVRHPLVELRQPV-YTPNTLHLTDDANAL-IITG  709

Query  670  PNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEM  729
            PNMGGKST++R  G+ V++AQ GCFVP +SA++   D ++ RVGA D   +GVSTFM EM
Sbjct  710  PNMGGKSTFMRSVGICVVLAQAGCFVPADSADMVTRDAVMCRVGATDHLAQGVSTFMVEM  769

Query  730  LETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTA  789
            LE+A+IL +AT+DSL IIDELGRGTSTYDGFGLAWAI++ +A K  +  +F+THFHE+T 
Sbjct  770  LESAAILNAATRDSLAIIDELGRGTSTYDGFGLAWAIAQEVAVKARSALLFSTHFHEMTQ  829

Query  790  LANQIPTVNNLHVtaltteetltM--LYQVKKGVCDQSFGIHVAELANFPKHVIECAKQK  847
            LA     V N H  A       T+   Y+++ G C +S+G++VA+LAN P+ V++ AK K
Sbjct  830  LAEHHTNVRNAHFGAEVNTVEGTLRFSYRLEPGPCGRSYGLYVAQLANLPEEVVQSAKCK  889

Query  848  ALELEEF-QYIGESQGYDIMEPAAKKCYLEREQGEKIIQEFLSKVKQMPFTEMSEENITI  906
            A  LE F Q  G+ + Y  +  A+ +         K I+  L+  K     E + + + +
Sbjct  890  AAGLETFEQDEGQKRDYATISSASSEITERLAYYAKCIRG-LNDTKLAAGNEEASQRLRL  948

Query  907  KLKQ  910
            +++Q
Sbjct  949  EIQQ  952


>gi|71421366|ref|XP_811786.1|  DNA mismatch repair protein MSH2 [Trypanosoma cruzi strain CL 
Brener]
Length=989

 Score =  421 bits (1081),  Expect = 7e-116
 Identities = 305/926 (32%), Positives = 474/926 (51%), Gaps = 85/926 (9%)

Query  16   EVGFVRFFQGMPEKPTTTVRLFDRGDFYTAH---GEDALLAAREVFKTQGVIKYMGPAGA  72
            +V  ++ F  +       VRLF RG         G  A   ARE  ++  V+K  G    
Sbjct  35   DVSVLQAFTAVGGDDKACVRLFSRGGSTPGCYVLGSWAGFIAREYIRSTAVLKNWG----  90

Query  73   KNLQSVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLAYKASPGNLSQFE  132
              +  VV++    +  ++D LL R   VE Y+   G        +    + SPGN++ FE
Sbjct  91   -GVDVVVVNDSIAKEVIRDCLLRRGASVEYYERPPGG-----GTYACVQRGSPGNITDFE  144

Query  133  DILFGNNDMSASIGVVGVKM------------SAVDGQRQVGVGY--VDSIQRKLGLCEF  178
              LF   +    +   G  +              + G + + VG+  +++  R L   E+
Sbjct  145  ATLFSFEEAEIQLMATGAIVLENNNKGGNAGKCMISGGQGIRVGFAALNTTLRTLTYAEY  204

Query  179  PDNDQFSNLEALLIQIGPKECVL-------------PGGETAGDMG----------KLRQ  215
             D  Q ++L+AL+ Q   KE +               GG  AG  G           ++Q
Sbjct  205  LDTLQLTSLDALMAQCNLKELIYLDKSRCRGGSNSDRGGGAAGVAGGSGREEESLRAVKQ  264

Query  216  IIQRGGILITE------RKKADFSTKDIYQDLNRLLKGKKGEQMNSA--VLPEMENQVAV  267
            + +R  I   E          D   K +     R     KG+ +++   +L   E+++A+
Sbjct  265  LCERAKITYRELGHNGAAPSHDSPQKPLQLQGRREGNVTKGDFLSALEDILRVPEDRLAL  324

Query  268  SSLSAVIKFLELLS-------DDSNFGQFELTTFDFSQYMKLDIAAVRALNLFQGSVEDT  320
            S+     + +E L        D +N   F L     S +MKLD AA++AL++     E  
Sbjct  325  SNCPLASRAIEYLVSNIIDNFDATNHRAFYLKHTIPSTFMKLDTAAIQALHIIHQKPE-A  383

Query  321  TGS--QSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQE  378
             GS   S+ + LN+C T  G R++ QW+ QPL +   I +RL+LVE  VED+ LR  L  
Sbjct  384  RGSLPTSVYSWLNRCVTGMGSRMMRQWLLQPLRNAEDINQRLSLVELMVEDSILRDALLS  443

Query  379  DLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEG-KHQKLLLAVFV  437
             +LR   D++RL +K QR++  L+D   +   +N +P  +Q L  H+G ++ KLL+  ++
Sbjct  444  QVLRCCGDMDRLNRKLQRRSIALKDLQSILTFVNTIPRAVQVLRTHQGGRNDKLLMDEYI  503

Query  438  TPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIMNDLEKKMQSTLI  497
             PL D+   FS  + +I  T+D+   + +   + P FD  L EL E    + K ++S   
Sbjct  504  APLEDINEHFSNLRILITATVDLS--DENTTRINPEFDDELMELEEQRKSVVKAIESEHQ  561

Query  498  SAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLT  557
               +  G    KQ+K +    +GY FRVT KE++ +R +K   TV   K+GV+F + +L+
Sbjct  562  RVMKVYGWTE-KQLKCEYHTTYGYVFRVTRKEDQQVRTSKELITVSTSKDGVRFVSERLS  620

Query  558  SLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPV  617
            SL+E+Y   +  Y+  Q  + +++V+    Y+  +    +++A LD  V++A V   +P 
Sbjct  621  SLSEQYKGIRKVYDVRQQDLKQKLVSTVVTYLPVLDDAKELIAALDVFVAWATVVRDSPH  680

Query  618  PYVRPAIL--------EKGQGRIILKASRHACVEVQDEIAFIPNDVYFEKDKQMFHIITG  669
            P VRP I         E  +  I L   RH  VE++  + + PN +    D     IITG
Sbjct  681  PMVRPTIRTPETEEEQEGNKSLITLLNVRHPLVELRQPV-YTPNTLRLTDDANAL-IITG  738

Query  670  PNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEM  729
            PNMGGKST++R  G+ V++AQ GCFVP +SA+V   D ++ RVGA D   +GVSTFM EM
Sbjct  739  PNMGGKSTFMRSVGICVVLAQAGCFVPADSADVVTRDAVMCRVGATDHLAQGVSTFMVEM  798

Query  730  LETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTA  789
            LE+A+IL +AT+DSL IIDELGRGTSTYDGFGLAWAI++ +A K  +  +F+THFHE+T 
Sbjct  799  LESAAILNAATRDSLAIIDELGRGTSTYDGFGLAWAIAQEVAVKARSALLFSTHFHEMTQ  858

Query  790  LANQIPTVNNLHVtaltteetltM--LYQVKKGVCDQSFGIHVAELANFPKHVIECAKQK  847
            LA     V N H  A       T+   Y+++ G C +S+G++VA+LAN P+ V++ AK K
Sbjct  859  LAEHHTNVRNAHFGAEVNTVEGTLRFSYRLEPGPCGRSYGLYVAQLANLPEEVVQSAKCK  918

Query  848  ALELEEF-QYIGESQGYDIMEPAAKK  872
            A  LE F Q  G+ + Y  +  A+ +
Sbjct  919  AAGLETFEQDEGQKRDYTTISSASSE  944


>gi|71748512|ref|XP_823311.1|  DNA mismatch repair protein [Trypanosoma brucei TREU927]
Length=951

 Score =  419 bits (1077),  Expect = 2e-115
 Identities = 302/893 (33%), Positives = 467/893 (52%), Gaps = 76/893 (8%)

Query  20   VRFFQGMPEKPTTTVRLFDR---GDFYTAHGEDALLAAREVFKTQGVIKYMGPAGAKNLQ  76
            V+ F G     T+ +RLF R   G F    G  A L ARE  K+  V+K         + 
Sbjct  10   VQAFNGAGGDDTSCLRLFSRASAGCFIL--GSWASLVAREYVKSTAVLKNWS-----GVD  62

Query  77   SVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLAYKASPGNLSQFEDILF  136
            +V ++       ++D LL R   VE Y     ++ +    +    + SPG+++ FE +LF
Sbjct  63   AVAVNDSITREVIRDCLLRRGVSVEQY-----DRQTSGGRYVCMRRGSPGHIADFEAMLF  117

Query  137  GNNDMSASIGVVGV-----KMSAVDGQ--RQVGVGY--VDSIQRKLGLCEFPDNDQFSNL  187
               D    +  +G      K + V+G   + V VGY  +++  R L   E+ D  Q +NL
Sbjct  118  AFEDAEIQLMAIGSVVIDDKANRVNGPGGQHVRVGYAALNTTLRTLTYAEYHDTPQLTNL  177

Query  188  EALLIQIGPKECVLPG--------GETAGDMGK----------LRQIIQRGGILITERKK  229
            + L+ Q   K+ +           GE A D  +          L+Q+ +R  I + ER +
Sbjct  178  DVLMAQCNLKQLLYSNTDFSMNNTGEKAADSDESREQSDLLRALKQLCERANITLQERGQ  237

Query  230  ADFST-KDIYQDLNRLLKGKKGEQMNS--AVLPEMENQVAVSSLSAVIKFLELLS-----  281
            ++    K   +   R   G  GE +++   +L   E++  ++S     + LE L      
Sbjct  238  SNLPHGKQKSRATKRNSTGPNGELLSTLEGILRVPEDRHGLNSFPLASRALESLLESAID  297

Query  282  --DDSNFGQFELTTFDFSQYMKLDIAAVRALNLFQGSVEDTTGSQ--SLAALLNKCKTPQ  337
              D +N   F L     S +MK+D AA+ AL++     E   GS   S+ + LN+C T  
Sbjct  298  PFDSTNQHTFYLKHVVPSTFMKMDAAAIEALHIIHRKPE-ARGSMPTSIYSWLNRCTTGM  356

Query  338  GQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQ  397
            G RL+ QW+ QPL     I +RL+LV+  VE   LR  L   +LRR  D++RL +K QR+
Sbjct  357  GSRLMQQWLLQPLRSIEDINQRLSLVQIMVESPILRDALITQVLRRCTDMDRLNRKLQRR  416

Query  398  AANLQDCYRLYQGINQLPNVIQALEKHEGKHQK-LLLAVFVTPLTDLRSDFSKFQEMIET  456
               L+D   +    N +P  +  L  + G H   LLL  +VTPL D+    S  + +I  
Sbjct  417  TVALKDLQSILVFANTVPLAVDVLRTYHGGHDSSLLLKGYVTPLEDISEHLSNLRTLINA  476

Query  457  TLDMDQVENHEFLVKPSFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSS  516
            T+D+   + +   + P FD +LS L     +L K ++       +  G    KQ+K +  
Sbjct  477  TVDLS--DENTVRINPEFDDDLSFLERQRQNLVKAIEKENHRVLKQCGWTE-KQMKCEYH  533

Query  517  AQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDA  576
            A +GY FRV  K++  +R +K F TV   K+GV+F + +L+SL+E+Y     +Y+  Q  
Sbjct  534  ASYGYVFRVPRKDDHQVRTSKEFITVSTAKDGVRFVSGQLSSLSEQYKGITEDYKTRQQV  593

Query  577  IVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAIL----EKGQGRI  632
            + K++V+  + Y+  +    ++LA LD   ++A V   +  P VRP +     E+ +G +
Sbjct  594  LKKKLVDTVATYLPVLDDAKELLAALDVFAAWALVVKDSSRPMVRPTVRAPQSEEVKGNV  653

Query  633  ---------ILKASRHACVEVQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTG  683
                      +  +RH  VE++   AF PN V    +     IITGPNMGGKST++R  G
Sbjct  654  DNNSNGAILTIVNARHPLVELRQP-AFTPNTVQLTNEANAL-IITGPNMGGKSTFMRSIG  711

Query  684  VIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDS  743
            V V +AQ GCFVP +SA++ + D I+ RVGA D   +GVSTFM EMLE+A++L SAT+ +
Sbjct  712  VCVALAQAGCFVPADSADIVVRDAIMCRVGATDHLAQGVSTFMVEMLESAAMLNSATQQT  771

Query  744  LIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVt  803
            L I+DELGRGTSTYDGFGLAWAI++ +A    +  +F+THFHE+T LA +   V N+H  
Sbjct  772  LAIVDELGRGTSTYDGFGLAWAIAQEVAVNAKSALLFSTHFHEMTQLAARHTNVRNVHFG  831

Query  804  altteetltM--LYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEEF  854
            A       T+   YQ++ G C +S+G++VA+LA+ P  V++ A+QKA+ELE+F
Sbjct  832  ADVDTAARTLRFSYQLQPGPCGRSYGLYVAQLAHIPDDVLDSARQKAVELEDF  884


>gi|23509476|ref|NP_702143.1|  DNA mismatch repair protein Msh2p, putative [Plasmodium falciparum 
3D7]
Length=811

 Score =  407 bits (1045),  Expect = 1e-111
 Identities = 254/762 (33%), Positives = 414/762 (54%), Gaps = 37/762 (4%)

Query  158  QRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQII  217
            Q+ +GV + + ++ +  + EF DN  F+ LE+L IQ  P +C         D  +L  + 
Sbjct  25   QKSLGVCFYNYLKYEFLMTEFIDNGHFTALESLFIQKRPHKCFFNSTNDLVDDERLLNLF  84

Query  218  QRGGILITERKKADFSTKDIYQDLNRLLKGKKGEQMNSAVLPEMENQVAVSSLSAVIKFL  277
            +   +     +K  +   ++  +L +L+     +  N     E+EN  A   L  +I +L
Sbjct  85   KICNVQAIPLEKKKYDATNLKDEL-KLIISHNDDVRNYDKHLELEN--ACKCLMVLINYL  141

Query  278  ELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLFQG--SVEDTTGSQSLAALLNKCKT  335
            +L  +     Q ++   +   YM+LD AA+ ALN+     ++     + SL   L+KC T
Sbjct  142  KLKENQDIHNQCKINIHNMDLYMRLDKAAISALNILPNKKNIHSYNNNTSLLKFLDKCNT  201

Query  336  PQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQ  395
              G + +  W+ QPL +   I +RLN+VE F+++ + R  +  + L+R P+L++L    +
Sbjct  202  TIGSKKLVSWLTQPLTNVAEINKRLNIVEFFIKEDDARNVIFCNYLKRIPELDKLNHYLK  261

Query  396  RQAAN--------------LQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVFVTPLT  441
                N              L+D  ++Y  I     +   L+  +GK+++ +  + + PL 
Sbjct  262  EINQNNEIRVNSKYNEEMILKDIVKMYYSILDFKQIYFTLKPIQGKNKETIDEIIINPLR  321

Query  442  DLRSDFSKFQEMIETTLDMDQV-ENHEFLVKPSFDPNLSELREIMNDLEKKMQSTLISAA  500
            D+ + FSK  +MIE T+D+++V EN  +L+  SFD  L  +    N L KK++       
Sbjct  322  DILNKFSKLLDMIEITIDLEEVQENKVYLISTSFDNELEIIANEKNALMKKIKKHKDDVE  381

Query  501  RDLGLDP---------GKQIKLDSSAQFGYYFRVTCKE-EKVLRNNKNFSTVDIQKNGVK  550
            +D+  D           + I+L       + FRVT K+   V ++ K + TV + KN   
Sbjct  382  KDIFADKYDRTYKRANREDIRLVDCNTNVFLFRVTKKDCGLVQQDKKKYMTVRMNKNEFL  441

Query  551  FTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAH  610
            FT + L +L ++Y      Y   Q  I+ + +   S Y   ++   D+++ LD ++SF+ 
Sbjct  442  FTTNTLKNLCKQYDHCLNIYNTLQSEIINKTICAVSTYTPVIEKFIDLVSTLDVLISFSV  501

Query  611  VSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIA-FIPNDVYFEKDKQMFHIITG  669
            V + +P PYVRP I++ G+  +I++ SRH  +E+Q  +  FIPND++  K      I+TG
Sbjct  502  VCHNSPFPYVRPVIVDHGEN-VIMRKSRHPLLELQYNLNNFIPNDIHMNKKNSRLIIVTG  560

Query  670  PNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEM  729
            PNMGGKSTYIRQT +I ++AQIG FVPC+  EV I   I+ RVGA D QLKG+STF++EM
Sbjct  561  PNMGGKSTYIRQTAIICILAQIGMFVPCDFCEVPIFTQIMCRVGASDFQLKGISTFLSEM  620

Query  730  LETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTA  789
            +E A+I+++A ++S II+DELGRGTSTY+G G++W+I +YI   I  FC+FATHFHE++ 
Sbjct  621  IEAAAIVKNADQNSFIIVDELGRGTSTYEGLGISWSIGKYILDNIKCFCLFATHFHEMSN  680

Query  790  LANQIPTVNNLHVtaltteetltM--LYQVKKGVCDQSFGIHVAELANFPKHVIECAKQK  847
            +A Q   V N HV     +E   +  LY++K G  ++S+G++VAE+A  PK VI+ A +K
Sbjct  681  IAYQCEGVINRHVETTIDKEKKKICFLYEIKDGASNKSYGVNVAEIAKLPKEVIQKAYEK  740

Query  848  ALELEEFQ---YIGESQGYDIMEPAAKKCYLEREQGEKIIQE  886
              ELE  +   Y+ E    D    A +   ++     KI  E
Sbjct  741  VEELESAENKYYLKEKLNIDTSASADENYKMKISNYMKIKDE  782


>gi|17508445|ref|NP_491202.1|  MSH (MutS Homolog) family member (msh-2) [Caenorhabditis elegans]
Length=849

 Score =  400 bits (1027),  Expect = 1e-109
 Identities = 264/857 (30%), Positives = 456/857 (53%), Gaps = 48/857 (5%)

Query  26   MPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKY--MGPAGAKNLQSVVLSKM  83
            +  K   T+ +F RG++++ +G+DA   A  +FK+   +K   +    ++ ++ + +++ 
Sbjct  17   LKSKSPNTIAIFSRGEYFSVYGDDATFVATNIFKSDVCVKTFTLSTDNSQQMKYISVNRG  76

Query  84   NFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLAYKASPGNLSQFEDILFGNNDMSA  143
             +E  V++ +++ +  VE+Y       +S++ +W +  + SPGN   FE  +     +S 
Sbjct  77   QYEKVVRETIVLLRCSVELY-------SSEQGEWKMTKRGSPGNTVDFEQEI----GVSD  125

Query  144  SIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKECVLPG  203
               ++ + +   D   +V +   D+   ++ + E+ D   FS  E  +  + P E +L  
Sbjct  126  QAPILAIYIHPGDDDNRVTLCAWDAGNVRIVISEYIDTPSFSQTEQCIFGLCPTEYILVN  185

Query  204  -GETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLKGKKGEQMNSAVLPEME  262
             G  A    K+  +  R  +   ++ K      D+ + ++   K +           E +
Sbjct  186  EGSVAPKAKKIASMFTRMEVHNKQQLKPKSQWSDVIESVHLDYKDEA----------EKQ  235

Query  263  NQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQY--MKLDIAAVRALNLFQGSVE--  318
            N+    ++   ++ L   + D      + + F++  +  M +D  AV AL LFQ +    
Sbjct  236  NE----NIKECLQILHSNAADEYSISEKYSIFNYGTHGNMLIDSCAVEALELFQLNYNYL  291

Query  319  DTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQE  378
            + + + +L  +LNKCKT  G++L+  W+ +PL   + I ERL++VEA  E+  +RQ L++
Sbjct  292  EKSNNLTLYNVLNKCKTLPGEKLLRDWLSRPLCQIDHINERLDIVEALFENQTIRQKLRD  351

Query  379  DLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNV-IQALEKHEGKH-QKLLLAVF  436
             +L R PD ++LA++  R+   LQD  R YQ    L  V +Q ++  E +     +  + 
Sbjct  352  SILARMPDCSQLARRLMRKCT-LQDLNRFYQAATLLETVEMQLIQLSEAEQFAPSINRLL  410

Query  437  VTPLTDLRSDFSKFQEMIETTLDMD-QVENHEFLVKPSFDPNLSELREIMNDLEKKMQST  495
             + +T++     +FQ + +   D D + EN E  V+  F P + E+ E +  +E+  +  
Sbjct  411  KSEITEILKKVERFQVLCDEFFDFDYEKENKEIRVRVDFVPEIQEISEKLEQMERVAEKL  470

Query  496  LISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSK  555
                +     D    +KLD ++Q+G+YFRVT KEEK +R          + +GVKF+  +
Sbjct  471  RKKYSAKFECD---NLKLDKNSQYGFYFRVTLKEEKSIRKKDVHILETTKGSGVKFSVGE  527

Query  556  LTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVS---FAHVS  612
            L+ +N+E+ +   +Y  A++ ++  +   +  ++  +  +  ++A LD  VS   FA  S
Sbjct  528  LSDINDEFLEFHLKYTRAEEEVISMLCKKAEEFIPLIPAMAQLIATLDVFVSLSTFAATS  587

Query  613  NGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYFEKDKQMFHIITGPNM  672
            +G    Y RP +L  G  R+ LK  RH  +E   E  FIPNDV  +K + +  I+TG NM
Sbjct  588  SGI---YTRPNLLPLGSKRLELKQCRHPVIEGNSEKPFIPNDVVLDKCRLI--ILTGANM  642

Query  673  GGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLET  732
            GGKSTY+R   + +L+AQIG FVPC SA +S+VD I  RVGA D Q +G+STFMAEML+ 
Sbjct  643  GGKSTYLRSAALSILLAQIGSFVPCSSATISVVDGIFTRVGASDKQSQGISTFMAEMLDC  702

Query  733  ASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALAN  792
            ++IL+ ATK+S ++IDELGRGTST+DGFG+A AI++ I  +I    +FATHFHE+  LA 
Sbjct  703  SAILQRATKNSFVVIDELGRGTSTFDGFGIASAIAQDILNRIQCLSIFATHFHEMGKLAE  762

Query  793  QIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELE  852
            Q P    L +        + MLY+V +GV   SFG+ VA++    ++VI  A Q    LE
Sbjct  763  Q-PGAVALQMGVQIENNEIHMLYKVFEGVAQCSFGLQVAKMVGIDENVINKAAQLLEGLE  821

Query  853  EFQYIGESQGYDIMEPA  869
            +   I   +  +++E A
Sbjct  822  KKLVIDSKKKKELLESA  838


>gi|68076057|ref|XP_679948.1|  DNA mismatch repair protein [Plasmodium berghei strain ANKA]
Length=852

 Score =  399 bits (1024),  Expect = 3e-109
 Identities = 252/768 (32%), Positives = 408/768 (53%), Gaps = 76/768 (9%)

Query  159  RQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQIIQ  218
            R VG+   +S   +  L E+ +ND F+ LE++LIQ  P   +        D  +++ I  
Sbjct  20   RYVGICIYNSTTNEFSLSEYIENDHFTTLESILIQTDPDSLIYLPCNNILDNKRIKLICN  79

Query  219  RGGILITERKKADFSTKDIYQDLNRLLKGKKGEQMNSAVLPEMENQVAVSSLSAVIKFLE  278
               I + E  K  F    I  DL +L+K     +   + L      +A  +LS++IK+L 
Sbjct  80   LCEIKLCELNKDIFQIMSIETDLEKLIKVNDDVKNYVSFL---NLTLACKALSSIIKYLN  136

Query  279  LLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNL--------------FQGSVEDTTG--  322
            LL++DS   +  L  ++ S+Y+KLD AA+ +LN+               Q  +  + G  
Sbjct  137  LLNEDSAINKCTLKWYNISKYVKLDKAAICSLNINTYISKEQKNGIGGSQQMLSQSHGGN  196

Query  323  SQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLLR  382
            + +L   LNKCKT  G+R + +WI  P+ D+ +I +RL++VE   +D  LR  +Q D LR
Sbjct  197  TMTLYKFLNKCKTKIGERKLLKWIMHPIRDEKKINQRLDMVEIMNDDQALRSMIQADYLR  256

Query  383  RFPDLNRLAKKFQ--------------------------RQAANLQDCYRLYQGINQLPN  416
            +  DL+ + KK +                               ++D  +LY  +    N
Sbjct  257  KVCDLDLIIKKLKIANNIIKNSNMSDNHGAIQNRSLGNSNNKCTIEDLVKLYDTVVASKN  316

Query  417  VIQALEKHEG-----KHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVK  471
            +  AL+++        ++K L   F+ PL  +    + F ++IE T+D DQ+  ++FL+ 
Sbjct  317  IYHALDEYNNGTQKKNNKKTLEENFIIPLKSIIISLTSFLKLIELTVDFDQIIKNQFLIS  376

Query  472  PSFDPNLSELREIMNDLEKKMQSTLISAARDL-----GLDPGKQIKLDSSAQFG------  520
            P+FD NL  L +   ++ K++         D+     G    K  K  SS   G      
Sbjct  377  PNFDDNLMALSKEKEEIYKQILHHRAEVEEDINYLKKGDKQSKNNKNISSNNSGMKEDVK  436

Query  521  --------YYFRVTCKEEKVLRNNKN-FSTVDIQKNGVKFTNSKLTSLneeytknkteye  571
                    + FR   K+   ++  K  ++ V + KN + F  +KL  L ++Y      Y 
Sbjct  437  LIDCNTNVFLFRAVKKDIIFIQQRKKTYNQVRVNKNEILFNTNKLRDLCKQYQYVLHSYN  496

Query  572  eAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGR  631
             +Q+ +  + + ++S Y EP   L+ +++Q+D   SFA+V +     YVRP + + G+  
Sbjct  497  TSQEQLANKAIEVASSYWEPFNKLSKIISQIDIFCSFAYVISQCISTYVRPIVEQHGK-I  555

Query  632  IILKASRHACVEVQ--DEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMA  689
            + +K SRH  VE        FIPND++ +K+    +IITGPNMGGKSTYIRQ  +I LMA
Sbjct  556  LEIKNSRHPLVEANYLQTKNFIPNDIHMDKENNRLNIITGPNMGGKSTYIRQIAIISLMA  615

Query  690  QIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDE  749
             IGCFVP   A++ I   I+ R+G+ D QLKG+STF +EM+E ++I+++A   SL+IIDE
Sbjct  616  HIGCFVPSTYAKIPIFSQIMCRIGSSDIQLKGISTFFSEMIEVSAIIKNA-DSSLVIIDE  674

Query  750  LGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVtalttee  809
            LGRGTSTY+GFG++W+++ Y+   I   C+FATHFHE++ L ++   V+N HV+A   E 
Sbjct  675  LGRGTSTYEGFGISWSVANYLLNNIKCLCLFATHFHEISNLEDEHTAVSNNHVSAKIDEA  734

Query  810  tltM--LYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEEFQ  855
               +  LY++KKG  D+S+G+HVA++A  P+ VI+ + +K+ ELE  +
Sbjct  735  KKKISFLYEIKKGFADKSYGVHVAQIAKLPQKVIDKSFEKSKELESIE  782


>gi|82913509|ref|XP_728672.1|  hypothetical protein PY01096 [Plasmodium yoelii yoelii str. 17XNL]
Length=853

 Score =  396 bits (1018),  Expect = 1e-108
 Identities = 249/768 (32%), Positives = 405/768 (52%), Gaps = 75/768 (9%)

Query  159  RQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQIIQ  218
            R VG+   ++   +  L E+ +ND F+ LE++LIQ  P   +        D  ++  I  
Sbjct  20   RYVGICIYNNTTNEFSLSEYIENDHFTTLESILIQTNPDSLIYLPCNNILDNKRINLICN  79

Query  219  RGGILITERKKADFSTKDIYQDLNRLLKGKKGEQMNSAVLPEMENQVAVSSLSAVIKFLE  278
               I + E  K  F    I  DL +L+      +   + L      +   +LS++IK+L 
Sbjct  80   LCEIKLCELNKDIFQIMSIETDLEKLINVNDDVKNYVSFL---NLTLGCKALSSIIKYLN  136

Query  279  LLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNL--------------FQGSVEDTTG--  322
            LL++DS   +  L  ++ S+Y+KLD AA+ +LN+               Q ++    G  
Sbjct  137  LLNEDSAINKCTLKWYNISKYVKLDKAAICSLNINTYISKEQKNGIGGSQQTLSQNHGGN  196

Query  323  SQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLLR  382
            + +L   LNKCKT  G+R + +WI  P+ D+ +I +RL++VE   +D  LR  +Q + LR
Sbjct  197  TMTLYKFLNKCKTKIGERKLLKWIMHPIRDEKKINQRLDMVEIMNDDQALRSMIQGEYLR  256

Query  383  RFPDLNRLAKKFQ--------------------------RQAANLQDCYRLYQGINQLPN  416
            +  DL+ + KK +                               ++D  +LY  +    N
Sbjct  257  KVCDLDLIIKKLKIANNIVKNNNMSDNHGAKQNRSFGNSNNKCTIEDLVKLYDTVIASKN  316

Query  417  VIQALEKHEGKHQK-----LLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVK  471
            +  AL+++    QK      L   F+ PL  +    + F ++IE T+D DQ+  ++FL+ 
Sbjct  317  IYHALDEYNNGTQKKNTKKTLEENFIIPLKSIIISLTSFLKLIELTVDFDQIIKNQFLIS  376

Query  472  PSFDPNLSELREIMNDLEKKMQSTLISAARDL-----GLDPGKQIKLDSSAQFG------  520
            P+FD NL  L +   ++ K++         D+     G    K  K  SS   G      
Sbjct  377  PNFDDNLMALSKEKEEIYKQILHHRSEVEEDINYLKKGDKQSKNNKNISSNNSGMKEDVK  436

Query  521  --------YYFRVTCKEEKVLRNNKN-FSTVDIQKNGVKFTNSKLTSLneeytknkteye  571
                    + FR   K+   ++  K  ++ V + KN + F  +KL  L ++Y      Y 
Sbjct  437  LIDCNTNVFLFRAVKKDIIFIQQRKKTYNQVRVNKNEILFNTNKLRDLCKQYQYVLHSYN  496

Query  572  eAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGR  631
             +Q+ +  + + ++S Y EP   L+ +++Q+D   SFA+V +     YVRP + + G+  
Sbjct  497  TSQEHLANKAIEVASSYWEPFNKLSKIISQIDIFCSFAYVISQCISTYVRPIVEQNGKV-  555

Query  632  IILKASRHACVEVQ--DEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMA  689
            + +K SRH  VE        FIPND++ +K+    +IITGPNMGGKSTYIRQ  +I LMA
Sbjct  556  LEIKNSRHPLVEANYLQIKNFIPNDIHMDKENNRLNIITGPNMGGKSTYIRQIAIISLMA  615

Query  690  QIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDE  749
             IGCFVP   A++ I   I+ R+G+ D QLKG+STF +EM+E ++I+++A  D+L+IIDE
Sbjct  616  HIGCFVPSTYAKIPIFSQIMCRIGSSDIQLKGISTFFSEMIEVSAIIKNADSDTLVIIDE  675

Query  750  LGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVtalttee  809
            LGRGTSTY+GFG++W+++ Y+   I   C+FATHFHE++ L ++   V+N HV+A   E 
Sbjct  676  LGRGTSTYEGFGISWSVANYLLNNIKCLCLFATHFHEISNLEDEHAAVSNNHVSAKIDEA  735

Query  810  tltM--LYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEEFQ  855
               +  LY++KKG  D+S+G+HVA++A  P+ VI+ + +K+ ELE  +
Sbjct  736  KKKISFLYEIKKGFADKSYGVHVAQIAKLPQKVIDKSFEKSKELESIE  783


>gi|71032669|ref|XP_765976.1|  DNA mismatch repair protein MSH2 [Theileria parva strain Muguga]
Length=790

 Score =  381 bits (979),  Expect = 5e-104
 Identities = 256/740 (34%), Positives = 403/740 (54%), Gaps = 36/740 (4%)

Query  139  NDMSASIGVVGVKMSAVDGQ-RQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPK  197
            N ++ ++ V+GV +  +    +QVG+  ++  +  + + E  DN+ F+NLE+L++QI P 
Sbjct  27   NTLNLNVKVLGVVVKTISSLVKQVGISLINFSENAIKVSEISDNEYFTNLESLILQINPS  86

Query  198  ECVLPGGETAGDMGKLRQIIQRGGILITER--KKADFSTKDIYQDLNRLLKGKKGEQMNS  255
             CVL   + + D  ++  +I    +  T +     +    D ++  N L      +    
Sbjct  87   NCVLAIPKDSLDYKRINHVIAVCNLKTTFKFINNKEIDLLDDFKVTNSLEYLLMDDDSVK  146

Query  256  AVLPEMENQVAVSSLSAVIKFLELLSDDSNF-GQFELTTFDFSQYMKLDIAAVRALNLFQ  314
              + E+  ++A+ +      F+     D N+   F L+ +    Y+ LD AA  AL++  
Sbjct  147  NHMKEISLKLAMKAFCLTADFINY--KDRNYKSHFTLSIYTMDNYLCLDRAAFNALSILP  204

Query  315  GSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQ  374
             + +      SL  LLNKC+T  G +L+  WI QPL+    I++R + VEAF     + +
Sbjct  205  HNNQQCV-KMSLYDLLNKCRTSIGSQLLKMWITQPLVSVVDIKKRQDCVEAF---KSMYR  260

Query  375  TLQEDLLRRFPDLNRLAKKFQR----------QAANLQDCYRLYQGINQLPNVIQ-ALEK  423
            T+Q + LR+  +L+++  KF+           +  + +D   LY  I     + Q   ++
Sbjct  261  TIQSECLRKVQNLDQILTKFKNFDMGVETKCTKQPSFEDLVVLYDCIISANRLNQFTFKR  320

Query  424  HEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNL----S  479
            ++G H   +  +F  PL+ + S F  +  ++E T+D+ + EN  ++   +FD +L    S
Sbjct  321  YDGVHSHTIRELFAEPLSKISSKFESYLRLVEKTVDLKEAENRVYVFNRNFDESLKKISS  380

Query  480  ELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNK--  537
            +L +I  D+E + Q+         G   G Q+K+      G+ FRV  K+   L   +  
Sbjct  381  KLDQIRYDIEMQRQAIQNELPYSSG-KKGNQVKIVECNTLGFLFRVAKKDHPSLMKAQIP  439

Query  538  --NFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTL  595
              +   V + KN   FT +KL      Y      YEE+QD +VK    ++  Y   ++  
Sbjct  440  GVSIEKVRLNKNEFLFTTAKLRRQCTLYKNTLELYEESQDLMVKRTFKVACTYWTLLERF  499

Query  596  NDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVE-VQDEIAFIPND  654
              ++A LD + +FA V+      YVRP I E G+  + L  +RH  VE V    +FIPND
Sbjct  500  IKIIATLDVLTAFAEVAT--LFNYVRPTIDETGK-TVNLTEARHPLVEYVLSSNSFIPND  556

Query  655  VYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGA  714
            +Y E+D+    IITGPNMGGKSTYI+Q G+I ++ QIG FVPC+ A++ I   IL R+GA
Sbjct  557  LYMERDRSRVQIITGPNMGGKSTYIKQIGLIAILNQIGSFVPCKKAKLPIFKHILCRIGA  616

Query  715  GDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKI  774
             D Q +GVSTF+AEM+E+A+ILR A + SL+IIDELGRGTST+DGFGL+WAI   +  + 
Sbjct  617  SDIQQRGVSTFLAEMVESAAILRIANEHSLVIIDELGRGTSTHDGFGLSWAIVVDLIERA  676

Query  775  GAFCMFATHFHELTALANQIPTVNNLHVtaltteetltM--LYQVKKGVCDQSFGIHVAE  832
              FC+ ATHFHE+ +LA +   V N H+TA   +   +M  LY+VK GVC +SFGI+VA 
Sbjct  677  KCFCLCATHFHEMGSLALEHFGVVNKHLTAQFYDSINSMTFLYKVKDGVCKKSFGINVAI  736

Query  833  LANFPKHVIECAKQKALELE  852
            +A FP+ VIE A+ K  ELE
Sbjct  737  IAKFPQDVIESAQNKLKELE  756


>gi|66361202|ref|XP_627287.1|  MutS like ABC ATpase involved in DNA repair [Cryptosporidium 
parvum Iowa II]
Length=848

 Score =  371 bits (952),  Expect = 7e-101
 Identities = 238/754 (31%), Positives = 399/754 (52%), Gaps = 65/754 (8%)

Query  160  QVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQIIQR  219
            ++G+   D     + +    DN+Q S LE+LL++  P   V    +    + +LR ++  
Sbjct  28   KLGISLFDVNSGLISVANIEDNEQLSELESLLVRTQPSNVVYSVQKDCLSLKRLRNLLDM  87

Query  220  GGILITERKKADFSTKDIYQDLNRLLKGKKGEQMNSAVLPEMENQVAVSSLSAVIKFLEL  279
                  E  + +F      +D   ++        +S    E+E+++   SL  +I+  +L
Sbjct  88   NNNWTCE--EIEFPKSSTVEDFEVIISPLLRRSCSSYG-KELESELIRHSLLNLIRHFQL  144

Query  280  LSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQ  339
            +    N  Q E+       +M++D A V++L +F    E +  S +L  LLNK +T  G 
Sbjct  145  VQSKENNSQCEIKFLVTKTFMRMDSACVQSLRIFPSKGESSKASTNLFGLLNKTRTKVGA  204

Query  340  RLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAA  399
            R + QW++QPL+D+ +I  R ++VE F ++  LRQ L    +R+  DL+++A +F+  A+
Sbjct  205  RRLEQWLRQPLIDEKQIISRQDVVEFFCKNDFLRQKLYGIHMRKVCDLDQIAVRFRTFAS  264

Query  400  ---------------NLQDCYRLYQGINQLPNVIQ----ALE--KHEGKHQKLLLAVFVT  438
                            L+D  +LY  + Q  N+      ALE  K+       + +V+  
Sbjct  265  LMASESSKSEREPKFGLEDMVKLYDSVMQSGNIFSDIKDALEENKNSDSSPSFVQSVYDL  324

Query  439  PLTDLRSDFSKFQE---MIETTLDMDQVENHEFLVKPSFDPNLSELREIMNDLEKKMQST  495
             L  L S  ++F++   ++E T+D+++ +   +L+ P F P L +L E  N +++K+++ 
Sbjct  325  ILVPLESTLNRFKDYIRLVEKTIDLEEADKGNYLIIPYFTPELEKLSEEKNRIQRKIEAH  384

Query  496  LISA----ARDLGLDPGKQ----IKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKN  547
                     R+ G + G +    +     A     FRVT ++ +  ++ K F  V I KN
Sbjct  385  RKDLDAYLCRERGYNEGSREAVRVIRGEGADTSLCFRVTRRDIEYFQDKKRFKQVRINKN  444

Query  548  GVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVS  607
               F  ++L  L++   K   EY   Q+ ++ + ++++S Y   +  L  +L  +D ++S
Sbjct  445  DYIFRTNELMDLSDREEKVIKEYNNEQEQVLVKALSVASTYWSLVSRLAGILGSIDVLLS  504

Query  608  FAHVSNGAPVPYVRPAIL-------------EKGQG----RIILKASRHACVEVQDEIA-  649
            F+  S  A +P+VRP ++             E G      R   K  RH  +E Q  ++ 
Sbjct  505  FSMTSLCAQIPFVRPKMVNGKCNLATEMKISEDGSTNCNCRFYCKELRHPLIEAQGTVST  564

Query  650  ---FIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVD  706
               F+ NDV   +   +  IITGPNMGGKSTYIRQ  +  L+AQIGCFVP + A++ I+D
Sbjct  565  TGQFVANDVELHRHGNLLSIITGPNMGGKSTYIRQIAICSLLAQIGCFVPAQEAQIPIMD  624

Query  707  CILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAI  766
             ++ RVGA D+Q+ G+STF AEM+E ++ILRSAT+ +L+I+DELGRGTST+DGFGLAW+I
Sbjct  625  QLMCRVGASDAQILGISTFFAEMIEASAILRSATERTLVIVDELGRGTSTFDGFGLAWSI  684

Query  767  SEYIATKIGAFCMFATHFHELTALANQIPTVNNLHV---------taltteetltMLYQV  817
            + Y+ ++   + +FATHFHEL++LA+  P V NL V          +      L  LY+V
Sbjct  685  ASYLVSEKKCYTLFATHFHELSSLASSTPNVTNLRVTASTSKALSLSKQGSGVLKFLYKV  744

Query  818  KKGVCDQSFGIHVAELANFPKHVIECAKQKALEL  851
            +KG  D+S G+ VAEL+  P   ++ +++KA EL
Sbjct  745  EKGFTDKSLGVDVAELSGLPSETVKRSREKAEEL  778


>gi|67623531|ref|XP_668048.1|  MutS 2-related [Cryptosporidium hominis TU502]
Length=847

 Score =  368 bits (945),  Expect = 4e-100
 Identities = 236/754 (31%), Positives = 398/754 (52%), Gaps = 65/754 (8%)

Query  160  QVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQIIQR  219
            ++G+   D     + +    DN+Q S LE+LL++  P   V    +    + +LR ++  
Sbjct  27   KLGISLFDVNSGLISVANIEDNEQLSELESLLVRTQPSNVVYSVQKDCLSLKRLRNVLDM  86

Query  220  GGILITERKKADFSTKDIYQDLNRLLKGKKGEQMNSAVLPEMENQVAVSSLSAVIKFLEL  279
                  E  + +F      +D   ++        ++    E+E+++   SL  +I+  +L
Sbjct  87   NNNWTCE--EIEFPKSSTVEDFEVIISPLLRRPCSNYG-KELESELIRQSLLNLIRHFQL  143

Query  280  LSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQ  339
            +    N  Q E+       +M++D A V++L +F    E +  S +L  LLNK +T  G 
Sbjct  144  VQSKENNSQCEIKFLVTKTFMRMDSACVQSLRIFPSKGESSKASTNLFGLLNKTRTKVGA  203

Query  340  RLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAA  399
            R + QW++QPL+D+ +I  R ++VE F ++  LRQ L    +R+  DL+++A +F+  A+
Sbjct  204  RRLEQWLRQPLIDEKQIISRQDVVEFFCKNDFLRQKLYGIHMRKVCDLDQIAVRFRTFAS  263

Query  400  ---------------NLQDCYRLYQGINQLPNVIQ----ALE--KHEGKHQKLLLAVFVT  438
                            L+D  +LY  + Q  N+      ALE  K+       + +V+  
Sbjct  264  LMASESSKSEREAKFGLEDMVKLYDSVMQSGNIFSDIKDALEENKNSDSSPSFVQSVYDL  323

Query  439  PLTDLRSDFSKFQE---MIETTLDMDQVENHEFLVKPSFDPNLSELREIMNDLEKKMQST  495
             L  L S  ++F++   ++E T+D+++ +   +L+ P F P L +L E  N ++ K+++ 
Sbjct  324  ILVPLESTLNRFKDYIRLVEKTIDLEEADKGNYLIIPYFTPELEKLSEEKNRIQCKIEAH  383

Query  496  LISA----ARDLGLDPGKQ----IKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKN  547
                     R+ G + G +    +     A     FRVT ++ +  ++ K F  V I KN
Sbjct  384  RKDLDAYLCRERGYNEGSREAVRVIRGEGADTSLCFRVTRRDIEYFQDKKRFKQVRINKN  443

Query  548  GVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVS  607
               F  ++L  L++   +   EY   Q+ ++ + ++++S Y   +  L  +L  +D ++S
Sbjct  444  DYIFRTNELMDLSDREERVIKEYNNEQEQVLVKALSVASTYWSLVSRLAGILGSIDVLLS  503

Query  608  FAHVSNGAPVPYVRPAIL-------------EKGQG----RIILKASRHACVEVQDEIA-  649
            F+  S  A +P+VRP ++             E G      R   K  RH  +E Q  ++ 
Sbjct  504  FSMTSLCAQIPFVRPKMVNGECNLATEMKISEDGSTNCNCRFYCKELRHPLIEAQGTVST  563

Query  650  ---FIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVD  706
               F+ NDV   +   +  IITGPNMGGKSTYIRQ  +  L+AQIGCFVP + A++ I+D
Sbjct  564  TGQFVANDVELHRHGNLLSIITGPNMGGKSTYIRQIAICSLLAQIGCFVPAQEAQIPIMD  623

Query  707  CILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAI  766
             ++ RVGA D+Q+ G+STF AEM+E ++ILRSAT+ +L+I+DELGRGTST+DGFGLAW+I
Sbjct  624  QLMCRVGASDAQILGISTFFAEMIEASAILRSATERTLVIVDELGRGTSTFDGFGLAWSI  683

Query  767  SEYIATKIGAFCMFATHFHELTALANQIPTVNNLHV---------taltteetltMLYQV  817
            + Y+ ++   + +FATHFHEL++LA+  P V NL V          +      L  LY+V
Sbjct  684  ASYLVSEKKCYTLFATHFHELSSLASSTPNVTNLRVTASTSKVPSLSKQGSGVLKFLYKV  743

Query  818  KKGVCDQSFGIHVAELANFPKHVIECAKQKALEL  851
            +KG  D+S G+ VAEL+  P   ++ +++KA EL
Sbjct  744  EKGFTDKSLGVDVAELSGLPSETVKRSREKAEEL  777


>gi|84999170|ref|XP_954306.1|  DNA mismatch repair protein Msh2 [Theileria annulata strain Ankara]
Length=651

 Score =  353 bits (905),  Expect = 2e-95
 Identities = 231/620 (37%), Positives = 346/620 (55%), Gaps = 36/620 (5%)

Query  261  MENQVAVSSLSAVIKFLELLSDDSNF------GQFELTTFDFSQYMKLDIAAVRALNLFQ  314
            ++N +   +L   +K   L +D  N+        F L+ +    Y+ LD AA  +L++  
Sbjct  6    VKNHMKEINLKLAMKAFCLTADFINYKDRNYKSHFTLSIYTMDNYLCLDRAAFTSLSILP  65

Query  315  GSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQ  374
             +        SL  LLNKC+T  G +L+  WI QPL+    I++R + VEAF     + +
Sbjct  66   FNTHQQNVKMSLYDLLNKCRTSIGSQLLKMWITQPLVSVVDIKKRQDCVEAF---KSMYR  122

Query  375  TLQEDLLRRFPDLNRLAKKFQR----------QAANLQDCYRLYQGINQLPNVIQ-ALEK  423
            T+Q + LR+  +L+++  KF+           +  + +D   LY  I     + Q   ++
Sbjct  123  TIQSECLRKVQNLDQILTKFKNFDMGIEAKSTKQPSFEDLVVLYDCIISANRLNQFTFKR  182

Query  424  HEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNL----S  479
            ++G H   +  +F  PL+ + S F  +  ++E T+D+ + EN  ++   +FD +L    S
Sbjct  183  YDGIHSHTIRELFAEPLSKISSKFESYLRLVEKTVDLKEAENRVYVFNRNFDESLKKISS  242

Query  480  ELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNK--  537
            +L +I  D+E + Q+  I          G Q+K+      G+ FR+  K++  L   +  
Sbjct  243  KLDQIRYDIEGQRQT--IQNELPYSGKKGNQVKIVECNTLGFLFRIPKKDQPSLLKAQIP  300

Query  538  --NFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTL  595
              N   V + KN   FT  KL      Y     +YEE+QD +VK    ++  Y   ++  
Sbjct  301  GVNIEKVRLNKNEFLFTTPKLRRQCTLYKSTLAQYEESQDLMVKRTFKVACTYWSLLERF  360

Query  596  NDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVE-VQDEIAFIPND  654
              ++A LD + +FA V+      YVRP I E G+  + L  +RH  VE V    +FIPND
Sbjct  361  IKIIATLDVLTAFAEVAT--LFNYVRPTIDETGK-TVNLVDARHPLVEYVLTSNSFIPND  417

Query  655  VYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGA  714
            +Y E+D+   HI TGPNMGGKSTYI+Q G+I +M QIG FVPC+ A++ I   IL R+GA
Sbjct  418  LYMERDRSRVHITTGPNMGGKSTYIKQVGLIAIMNQIGSFVPCKKAKLPIFKHILCRIGA  477

Query  715  GDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKI  774
             D QL+GVSTF+AEM+E+A+ILR A + SL+IIDELGRGTST+DGFGL+WAI   +  + 
Sbjct  478  SDIQLRGVSTFLAEMVESAAILRMANEHSLVIIDELGRGTSTHDGFGLSWAIVVDLIERA  537

Query  775  GAFCMFATHFHELTALANQIPTVNNLHVtaltteetltM--LYQVKKGVCDQSFGIHVAE  832
              FC+ ATHFHE+ +LA +   V N H+TA   +   +M  LY+VK GVC +SFGI+VA 
Sbjct  538  KCFCLCATHFHEMGSLALEHFGVVNKHLTAQFYDSNNSMTFLYKVKDGVCKKSFGINVAI  597

Query  833  LANFPKHVIECAKQKALELE  852
            +A FP  VIE A+ K  ELE
Sbjct  598  IAKFPPDVIESARNKLKELE  617


>gi|82793333|ref|XP_727998.1|  DNA mismatch repair protein Msh2 [Plasmodium yoelii yoelii str. 
17XNL]
Length=593

 Score =  347 bits (891),  Expect = 8e-94
 Identities = 205/549 (37%), Positives = 321/549 (58%), Gaps = 34/549 (6%)

Query  356  IEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAAN--------------L  401
            I +RLN+VE F+++ ++R ++  + L+R P+L++L    +    N              L
Sbjct  4    INQRLNIVETFIDEDDIRNSVFCNYLKRIPELDKLNHYLKEINKNNDIRVNSKYNEEMIL  63

Query  402  QDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMD  461
            +D  +LY  I     +   L    GKH++ L  + + PL D+ + FSKF +MIE T+D+ 
Sbjct  64   KDIVKLYYAILDFKQIYFLLVSINGKHKETLNEILIKPLHDILNKFSKFLDMIEMTIDLK  123

Query  462  QVE-NHEFLVKPSFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPG---------KQI  511
            ++E N  +L+   FD  L ++    + L KK+++      +DL  D           + I
Sbjct  124  EIEENKVYLISKHFDSELEQIYNEKSALMKKIKNHKEDVEKDLFSDKHDRRNKKAMREDI  183

Query  512  KLDSSAQFGYYFRVTCKEE--KVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkte  569
            +L      G+ FRV CK++   V +  K +  + + KN   FT + L +L  EY    + 
Sbjct  184  RLIECNTNGFLFRV-CKKDCPLVQQQKKKYLPIRMNKNEFLFTTNTLKNLCREYEHCLSI  242

Query  570  yeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQ  629
            Y   Q  IVK+ +   S Y   ++   DV++ LD +VSF+ V   +P  YVRPA+++ G+
Sbjct  243  YNTLQSEIVKKTICAVSTYTPVIEKFIDVVSTLDVLVSFSVVCYNSPFTYVRPALVKNGE  302

Query  630  GRIILKASRHACVEVQDEIA-FIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLM  688
              +I+K SRH  +E+Q  I+ FIPND++  K+K    I+TGPNMGGKSTYIRQ  +I ++
Sbjct  303  N-VIMKKSRHPLLELQHNISNFIPNDIHMNKNKSRLIIVTGPNMGGKSTYIRQIAIICIL  361

Query  689  AQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIID  748
            AQIG FVPC+  E+ I   I+ RVGA D QLKG+STF++EM+E ++I+++A  +SLII+D
Sbjct  362  AQIGMFVPCDFCEIPIFTQIMCRVGASDFQLKGISTFLSEMIEASAIIKNADNNSLIIVD  421

Query  749  ELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltte  808
            ELGRGTSTY+G G++W+I +YI   I  FC+FATHFHE++ +A Q   V N H+  +  +
Sbjct  422  ELGRGTSTYEGLGISWSIGKYILDNIKCFCLFATHFHEMSNIAYQCEGVINRHIETIIDQ  481

Query  809  etltM--LYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEEFQ---YIGESQGY  863
            +   +  LY++K G  ++S+G++VAE+A  PK VI+ A +K  ELE  +   Y+ E    
Sbjct  482  KNKKICFLYEIKDGASNKSYGVNVAEIAKLPKDVIQKAYEKVEELESAENKYYLKEKLNI  541

Query  864  DIMEPAAKK  872
            D      +K
Sbjct  542  DTSSSTNEK  550


>gi|67473640|ref|XP_652571.1|  DNA mismatch repair protein MSH2 [Entamoeba histolytica HM-1:IMSS]
Length=595

 Score =  333 bits (854),  Expect = 2e-89
 Identities = 201/553 (36%), Positives = 308/553 (55%), Gaps = 47/553 (8%)

Query  300  MKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEER  359
            M ++  A+  L+LF    E T     L   LN+  T  G++++ +WIKQPL+DK++I +R
Sbjct  10   MIIEEDAIEGLHLFGDKKEMT-----LFKHLNRTHTKIGEKMIKEWIKQPLIDKDKINKR  64

Query  360  LNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQ  419
            L LVE F +++ +R  ++ + L   PDL +L K   +  ++L+   +LY+ +    N+ +
Sbjct  65   LELVEGFYDNSGIRLKIKNEELAIIPDLEKLIKGINK--SDLESIVKLYEAVRISKNIKE  122

Query  420  ALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLS  479
             L++    + K +    + PL  +  +  KF+EM+ T +D+++ +NH F ++  FD  L 
Sbjct  123  ELKE---MNNKSIEKEIIEPLEKITEEMEKFEEMVVTLIDIEETQNHVFKIREDFDEGLQ  179

Query  480  ELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNF  539
            ++RE    +E+  +  L  AA DL +   K IK+          RV+   EK ++ NK +
Sbjct  180  KIRESHKKVEELFEKCLEQAANDLNIKTDK-IKIVEHNN-NLILRVSKSNEKEVKKNKKY  237

Query  540  STVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVL  599
            + +   K   KFT  ++ +LN +  K K + EE     ++EI  +  GY E  Q L +++
Sbjct  238  TIIQTLKGECKFTFKEMQTLNVKRDKLKLKEEEINKKFIEEINKVVEGYKEKFQELENMI  297

Query  600  AQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYFEK  659
              +D + SFA VS      Y +P I E  +G I +  +RH  +E     +FI ND+  ++
Sbjct  298  GYIDCIQSFATVSIDNNQGYSKPTIYESEKGIIKIIKARHPLIENNSINSFIENDIDIDR  357

Query  660  DKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQL  719
             +  F IITGPNMGGKSTY+R  G+ V+MAQIG FVPC  A +SI D I+ R+GAGD+ +
Sbjct  358  KETRFQIITGPNMGGKSTYLRMIGLCVIMAQIGMFVPCSEAHISICDKIMCRIGAGDNIV  417

Query  720  KGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCM  779
            +G+STF                      +ELGRGTSTYDGFG+AWAISEY+A  IG +C+
Sbjct  418  EGMSTFN---------------------NELGRGTSTYDGFGIAWAISEYLAIDIGCYCV  456

Query  780  FATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKH  839
            FATHFHE+T L  ++  V N HV A                +  Q   I+VAE A+FP  
Sbjct  457  FATHFHEITGLEKRVTGVINKHVEADI--------------IDKQLLAIYVAEWADFPHE  502

Query  840  VIECAKQKALELE  852
            V+E AK+KA EL+
Sbjct  503  VVESAKRKAKELD  515


>gi|50428111|ref|XP_457638.1|  hypothetical protein DEHA0B15983g [Debaryomyces hansenii CBS767]
Length=520

 Score =  326 bits (836),  Expect = 2e-87
 Identities = 214/501 (42%), Positives = 299/501 (59%), Gaps = 43/501 (8%)

Query  470  VKPSFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKE  529
            +KP FD +L  + +        +++  I  + DLG++  K++KL+   Q G+  RVT  +
Sbjct  23   IKPEFDESLIAINDNSQATLSNIKNCHIEVSEDLGIELEKKLKLEKHQQHGWCLRVTRND  82

Query  530  EKVLRNN-KNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGY  588
              VLRN   N+      K GV FT+  L SL+E+Y +   EY   Q  ++KE ++I+S Y
Sbjct  83   SSVLRNTGNNYIESQTVKAGVSFTSKSLRSLSEKYQEFSGEYNSKQRELIKETLSITSTY  142

Query  589  VEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAIL---------EKGQGRIILKASRH  639
                 +L+  L  LD + SFA+V+  AP+PYV+P +          E  Q +I L+ +RH
Sbjct  143  QLVFTSLSLTLGHLDVLASFANVAIFAPIPYVKPMLHPLSSSIESDEHKQRKIKLEEARH  202

Query  640  ACVEVQDEIAFIPNDVYF-------EKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIG  692
              +EVQD+I FI NDVY        +   + F IITGPNMGGKSTYIRQ GVI LM+Q+G
Sbjct  203  PVLEVQDDINFIANDVYLSTPNAEADSKGKPFVIITGPNMGGKSTYIRQVGVIALMSQVG  262

Query  693  CFVPCE----SAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIID  748
             FVP      + E+ I D IL+RVGAGDSQLKG+STFM EMLET+SIL +AT +SLII+D
Sbjct  263  SFVPASEDSSAPEIPIFDAILSRVGAGDSQLKGLSTFMIEMLETSSILATATHNSLIIVD  322

Query  749  ELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQI-PTVNNLHV-----  802
            ELGRGTSTYDGFGLAW+I E++ ++   F +FATHFHELT LA +    V+NLHV     
Sbjct  323  ELGRGTSTYDGFGLAWSILEHLISEKHCFTLFATHFHELTELATKYNDKVSNLHVVAHVE  382

Query  803  ----taltteetltMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEEFQYIG  858
                     E+ +T++Y+V+ G+ D+SFGIHVAEL  FP  ++  AK+KA EL+    I 
Sbjct  383  KNDEQNDENEDDITLMYKVEPGISDKSFGIHVAELVKFPNKIVNMAKRKASELQNSNSID  442

Query  859  ESQGYDIMEPAAKKCYLEREQGEKIIQEFLSKVKQMPF------TEMSEENITIKLKQLK  912
            E Q   I     K    E   G   ++E L K K + +      +  SEE + I LK+L 
Sbjct  443  EDQ--YIQNKRTKCSGDEITSGINNLKEILKKWKTICYDSDSKCSVESEEAVQI-LKKLV  499

Query  913  AEVIA---KNNSFVNEIISRI  930
             E  A   +++ ++NE++S +
Sbjct  500  NEDYAGTIQSDKYINEVLSML  520


>gi|70950501|ref|XP_744569.1|  DNA mismatch repair protein Msh2p [Plasmodium chabaudi chabaudi]
Length=629

 Score =  321 bits (822),  Expect = 8e-86
 Identities = 193/562 (34%), Positives = 309/562 (54%), Gaps = 58/562 (10%)

Query  349  PLMDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQ-------------  395
            P+ D+ +I +RL++VE   +D  LR  +Q D LR+  DL+ + KK +             
Sbjct  1    PIRDEKKINQRLDMVEIMNDDQALRSMIQADYLRKICDLDLIIKKLKIANNIVKNSNMSD  60

Query  396  -------------RQAANLQDCYRLYQGINQLPNVIQALEK-----HEGKHQKLLLAVFV  437
                              ++D  +LY  +    N+  AL +     H+  ++K L   F+
Sbjct  61   NYGAIHNRSYGNSNNKCTIEDLVKLYDTVVASKNIYYALNEYKNNTHKKNNKKTLEEHFI  120

Query  438  TPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIMNDLEKKMQSTLI  497
             PL  +    + F ++IE T+D DQV  ++FL+ P+FD NL  L +   ++ K++     
Sbjct  121  IPLESIIISLTSFLKLIELTVDFDQVIKNQFLISPNFDDNLMALSKEKEEIYKQILHHRA  180

Query  498  SAARDL-----GLDPGKQIKLDSSAQFG--------------YYFRVTCKEEKVLRNNKN  538
                D+     G    K  K  SS   G              + FR   K+   ++  K 
Sbjct  181  EVEEDINYLKRGDSKSKNNKNYSSNNSGMKEDVKLIDCNTNVFLFRSVKKDIVFIQQRKK  240

Query  539  -FSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLND  597
             ++ V + KN + F  +KL  L ++Y      Y  +Q+ +  + + ++S Y EP   L+ 
Sbjct  241  TYNQVRVNKNEILFNTNKLRELCKQYQYVLHSYNISQEQLANKAIEVASSYWEPFNKLSK  300

Query  598  VLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQ--DEIAFIPNDV  655
            +++Q+D   SFA+V +     YVRP + + G+  + ++ SRH  VE        FIPND+
Sbjct  301  IISQIDIFCSFAYVISQCLSTYVRPIVEQNGK-ILEIRNSRHPLVEANYLQTKNFIPNDI  359

Query  656  YFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAG  715
            Y +K+    +IITGPNMGGKSTYIRQ  +I LMA  GCFVP   A++ I   I+ R+G+ 
Sbjct  360  YMDKENNRLNIITGPNMGGKSTYIRQIAIISLMAH-GCFVPSTYAKIPIFSQIMCRIGSS  418

Query  716  DSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIG  775
            D QLKG+STF +EM+E ++I+++A  D+L+IIDELGRGTSTY+GFG++W+++ Y+   I 
Sbjct  419  DIQLKGISTFFSEMIEVSAIIKNADSDTLVIIDELGRGTSTYEGFGISWSVANYLLNNIK  478

Query  776  AFCMFATHFHELTALANQIPTVNNLHVtaltteetltM--LYQVKKGVCDQSFGIHVAEL  833
              C+FATHFHE++ L ++   V+N HV+A   E    +  LY++KKG  D+S+G+HVA++
Sbjct  479  CLCLFATHFHEISNLEDEYAAVSNNHVSAKIDEVKKKISFLYEIKKGFADKSYGVHVAQI  538

Query  834  ANFPKHVIECAKQKALELEEFQ  855
            A  P+ VI+ + +K+ ELE  +
Sbjct  539  A-LPQKVIDKSFEKSKELESIE  559


>gi|72016851|ref|XP_785162.1|  PREDICTED: similar to DNA mismatch repair protein Msh2 (MutS 
protein homolog 2), partial [Strongylocentrotus purpuratus]
Length=262

 Score =  309 bits (792),  Expect = 2e-82
 Identities = 159/261 (60%), Positives = 199/261 (76%), Gaps = 0/261 (0%)

Query  325  SLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRF  384
            SL +LLNKCKT QGQRL+ QW+KQPL+DK RIEERL++VE F  D ELRQTLQE+ L+R 
Sbjct  2    SLTSLLNKCKTAQGQRLLGQWVKQPLLDKIRIEERLDMVETFFNDLELRQTLQEEPLKRV  61

Query  385  PDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVFVTPLTDLR  444
            PD  RLAKKFQR+ A LQDCY++YQ ++ LPN+I+ LEKHEG    LL   F  PLT++ 
Sbjct  62   PDFQRLAKKFQRKRATLQDCYKVYQAVDYLPNLIEILEKHEGDKAHLLREHFSNPLTEML  121

Query  445  SDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIMNDLEKKMQSTLISAARDLG  504
             DFSKFQEM+ETTLD+ QVENHEFL+KP FD NL  LR  M++LE ++++ +  AARDLG
Sbjct  122  MDFSKFQEMVETTLDLQQVENHEFLIKPDFDENLMVLRTKMDELEDEIKTQINRAARDLG  181

Query  505  LDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeyt  564
            L+  K +KL+S+   GY+FRVT KEEK LRNN  +ST+D  KNGV+FTNSKL  LN+E+ 
Sbjct  182  LEANKTVKLESNNMLGYFFRVTRKEEKALRNNSKYSTIDTNKNGVRFTNSKLRGLNDEHM  241

Query  565  knkteyeeAQDAIVKEIVNIS  585
              K EY E Q A+V EI+ I+
Sbjct  242  AAKEEYNETQKAVVDEIIGIA  262


>gi|20089412|ref|NP_615487.1|  DNA mismatch repair protein [Methanosarcina acetivorans C2A]
Length=900

 Score =  303 bits (775),  Expect = 2e-80
 Identities = 255/922 (27%), Positives = 426/922 (46%), Gaps = 65/922 (7%)

Query  21   RFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMGPAGAKNLQSVVL  80
            ++++     P T +  F  GDFY + GEDA   A+E+      I        +  + + L
Sbjct  11   QYYEAKQAYPDTLI-FFRMGDFYESFGEDAKTIAKEL-----EITLTARGKDRTGERMPL  64

Query  81   SKMNFESFVKDL--LLVRQYRVEVYKNRAGNKASKEN-DWYLAYKASPGNL---SQFEDI  134
            + + + +    L  L+ + Y+V + +     K +K      +    +PG     S F D 
Sbjct  65   AGIPYHAIDTYLPRLINKGYKVAICEQLEDPKKAKGVVKRGVVRVVTPGTAIDSSMFSDA  124

Query  135  LFGNNDMSASIGVVGVKMSAVDGQRQV--GVGYVDSIQRKLGLCEFPDNDQFSNLEALLI  192
               NN + A  G  G K S  +G++++  G+ ++D    +    +F D++ F  L + L 
Sbjct  125  --SNNYLMAVAGREGGK-SGKNGEKEMEFGISFLDISTGEFLTTQFTDSENFDKLLSELA  181

Query  193  QIGPKECVLPGGETAGD--MGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLKGKKG  250
            ++ P EC+LP          GKLR+       ++ E     F T++  + L         
Sbjct  182  RMHPAECILPPSLYGNSELTGKLRE-----HTIVQEFAPEVFGTEEAGEKLKTHFGVATL  236

Query  251  EQMNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRAL  310
            E M    L     + AV S  A +++ +            L T+  +++M LD   +R L
Sbjct  237  EGMGCQKL-----EFAVYSAWAALEYAKTTQMRDLTHINTLRTYSNTEFMILDSITLRNL  291

Query  311  NLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDA  370
             + + +V D     SL   LN  +TP G R + +W+ +PL+   +I  RL+ +E   ED+
Sbjct  292  EIVK-NVRDEGDENSLYRTLNCTRTPMGNRTLKKWLLKPLLSVEKINPRLDAIEELAEDS  350

Query  371  ELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQK  430
             LR  ++ D L    D+ RL  +     A+ +D   L + +  +P++  +L +   K + 
Sbjct  351  LLRYDIR-DWLSDVRDIERLVGRIVYGNASARDLVALKKSLGVVPSLRDSLLE---KARF  406

Query  431  LLLAVFVTPLTDLRSDFSKFQEMIETTL-DMDQVENHEF-LVKPSFDPNLSELREIMNDL  488
             +L      L    S+  +  EMIE  + D   V   E  ++K  + P L ELR+I ++ 
Sbjct  407  EMLKEIAEGLASF-SELEELAEMIEIAIMDEPPVSVREGGMIKSGYSPELDELRDISSNS  465

Query  489  EKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNG  548
            ++ + +         G+   K +K+  +  FGYY  VT      +   +++       N 
Sbjct  466  KQWIAAFQQKERERSGI---KSLKVGYNKVFGYYIEVTHANSSQVP--EDYIRKQTMANA  520

Query  549  VKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSF  608
             +F   +L            +    +  I  EI    S     +Q   + +  LD + S 
Sbjct  521  ERFFTPELKEKESLILTANEKAVALEYEIFAEITRTLSARSRELQETAERIGTLDVLASL  580

Query  609  AHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYFEKDKQMFHIIT  668
            A  +      Y RP + E    +I+++  RH  VE      F+PND   +  +  F ++T
Sbjct  581  AEATENNN--YTRPQLTE--DCKILIRDGRHPVVESTVSGGFVPNDTEMDCKENQFLLVT  636

Query  669  GPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAE  728
            GPNM GKSTY+RQT +I +MAQ+G FVP   A V I+D +  R+GA D    G STFM E
Sbjct  637  GPNMAGKSTYMRQTALIAIMAQVGSFVPASYASVGIIDQVFTRIGAFDDLASGQSTFMVE  696

Query  729  MLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIAT--KIGAFCMFATHFHE  786
            M+E A+IL +A+  SL+++DE+GRGTSTYDG+ +A A+ E++    K+G   +FATH+H+
Sbjct  697  MVELANILNNASPKSLVLLDEIGRGTSTYDGYSIAKAVVEFLHNRGKVGIRALFATHYHQ  756

Query  787  LTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQ  846
            LTAL  ++  V N H+        L  L ++  G  D+S+GIHVA LA  P+ VIE A +
Sbjct  757  LTALEEKLKRVKNYHIAVKEDGHELVFLRKIVPGATDRSYGIHVARLAGVPEKVIERANE  816

Query  847  KALELEEFQYIGESQGYD-----------------IMEPAAKKCYLEREQGEKIIQEFLS  889
               ELE    + E++  +                 + +P +     E+ +G   ++  L 
Sbjct  817  ILKELERENVLEEAEDGENGKKKKSKATARYTQMLLFDPGSGSRSSEKAKGLSPVEAALK  876

Query  890  KVKQMPFTEMSEENITIKLKQL  911
            KV     T +   N   +LK+L
Sbjct  877  KVNPDEMTPIEALNKLHELKKL  898


>gi|89209977|ref|ZP_01188370.1|  MutS 1 protein [Halothermothrix orenii H 168]
Length=896

 Score =  303 bits (775),  Expect = 2e-80
 Identities = 270/908 (29%), Positives = 435/908 (47%), Gaps = 74/908 (8%)

Query  23   FQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMGPAGAKNLQSVVLSK  82
            +Q +  K    +  F  GDFY    +DA +AARE+      +      G +      +  
Sbjct  11   YQSIKNKYKDAILFFRLGDFYEMFNDDAKIAAREL---DLALTARNKGGGEKAPMAGVPC  67

Query  83   MNFESFVKDLLLVRQYRVEVYK-----NRAGNKASKENDWYLAYKASPGNLSQFEDILFG  137
             + ES++  LL  + Y+V + +     + A    S+E    +    +PG + + E +   
Sbjct  68   HSAESYIAKLL-EKGYKVAICEQIEDPSEAKGLVSRE----VVRIITPGTIIENEMLKDK  122

Query  138  NNDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSN-LEALLIQIGP  196
             N+  AS         A+  +  +G  YVD    +  + +F  + +FS+ +   L +I P
Sbjct  123  ENNYLAS---------AICYKDHLGFSYVDISTGEFYVTQF--SQKFSDKVWDELDRIQP  171

Query  197  KECVLPGG--ETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLKGKKGEQMN  254
            +E ++     ET     K +Q+         E+ KA +         N LL+  K   ++
Sbjct  172  REVIICKELEETENFADKKKQMNFVYNYSRIEKVKAAY---------NFLLEHFKTNSLS  222

Query  255  SAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLFQ  314
                 +     A+ +   +I FL+     +      +TT++ + YM LD A    L L  
Sbjct  223  GFGCED--KPAAILAAGEIINFLKDTQKRTLEHINRITTYNLTDYMVLDSATRYNLEL-T  279

Query  315  GSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQ  374
             ++       SL  +L++  T  G RL+ +WI QPL+D+N+IE RL+ VE  V +  L Q
Sbjct  280  STIRGNKHKGSLLNVLDQTITSMGGRLIKKWINQPLIDRNKIETRLDAVEELVNNYLLLQ  339

Query  375  TLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLA  434
             ++E L +   DL R+  K    +AN +D   L   I +LP + + LE+   K  K +  
Sbjct  340  EIREHL-KGIYDLERILGKVSYGSANARDLAALKYSILKLPQIKKDLEQLNTKLFKNMHE  398

Query  435  VFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEF-LVKPSFDPNLSELREIMNDLEKKMQ  493
             F  PL DL     +      + +D   V   E  L+K  +   L ELR+   + +  + 
Sbjct  399  TF-DPLIDLAGLLDR------SIVDEPPVSVREGGLIKDGYSSELDELRKARTEGKDWIA  451

Query  494  STLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTN  553
            +   +     G+     +K+  +  FGYY  +T  +  + R   N++      N  +F  
Sbjct  452  NLQKTERERTGIS---SLKVGFNKVFGYYIEIT--KANLDRVPDNYTRKQTLSNSERFIT  506

Query  554  SKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSN  613
             +L          + +  + +  +  +I +I    ++ ++    ++++LD + S A   N
Sbjct  507  PELKEKEALVLGAEEKINDLEYKLFVKIRDIVRDNIKRIKKTAAIISKLDVLTSLAQ--N  564

Query  614  GAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYFEKDKQMFHIITGPNMG  673
                 Y RP I   G   II    RH  VE   + AF+PND Y + +++ F IITGPNM 
Sbjct  565  ALERDYNRPRINNDGVIEII--KGRHPVVEDMGKGAFVPNDTYLDLEEERFIIITGPNMS  622

Query  674  GKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETA  733
            GKSTY+RQ  +IVLMAQ+G FVP + A + IVD I  RVGA D    G STFM EM E A
Sbjct  623  GKSTYMRQVALIVLMAQMGSFVPADKATIGIVDRIFTRVGASDDLTTGQSTFMVEMNEVA  682

Query  734  SILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYI--ATKIGAFCMFATHFHELTALA  791
            +I+ +AT++SLII+DE+GRGTSTYDG  +AWA+SEYI    +IGA  +FATH+HELT L 
Sbjct  683  NIVNNATRNSLIILDEVGRGTSTYDGLSIAWAVSEYINNPDRIGARTLFATHYHELTQLE  742

Query  792  NQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALEL  851
            N+ P + N +V     E+ +  L+++  G   +S+GI VA+LA  P  +I  A++   EL
Sbjct  743  NR-PGIKNYNVLVEEDEDGVHFLHKIIPGKASESYGIEVAQLAGLPMEIIIRAQEILAEL  801

Query  852  E----EFQYIGESQGYDIMEPAAKKCYLEREQGEKIIQEFLS------KVKQMPFTEMSE  901
            E    E    G+ +  +I             + +K   E+L+      KV+Q+P  + SE
Sbjct  802  EKKGKESTKTGKGENKNISHKTESDLINNIHESDK---EYLTKRNTNDKVQQLPLFK-SE  857

Query  902  ENITIKLK  909
              +  K+K
Sbjct  858  YRVIEKIK  865


>gi|82500773|ref|ZP_00886171.1|  MutS 1 protein [Caldicellulosiruptor saccharolyticus DSM 8903]
Length=863

 Score =  301 bits (771),  Expect = 7e-80
 Identities = 222/674 (32%), Positives = 343/674 (50%), Gaps = 46/674 (6%)

Query  258  LPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDF---SQYMKLDIAAVRALNLFQ  314
            +  + ++VA+S    V   L  L D        +  F+F     Y+++D++  R L L +
Sbjct  213  ITNINDKVALS----VGNLLNYLVDTQKISFNYIKKFEFYRVQNYLQIDLSTKRNLELTE  268

Query  315  GSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQ  374
             S+   +   SL  +L++ KT  G RL+ +W+++PL+D   I  RL+ VE    +  L  
Sbjct  269  -SIIARSKKNSLFGILDQAKTSMGSRLIKKWLERPLIDVVEINRRLDAVEELYNNFPLLM  327

Query  375  TLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLA  434
             + E LL    D+ RL+ KF  ++ N +D   L + I  LP + + L    G+ +  LL 
Sbjct  328  QI-EGLLEGIYDIERLSSKFAYKSINAKDLLSLKKSIEVLPRLKELL----GEFKSPLLK  382

Query  435  VFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIMNDLEKKMQS  494
                 L  L   +S     I     +   E    ++K  F+ ++  LR I     K  + 
Sbjct  383  ELYNELDTLEDVYSLIDSSINEDAPVGLKEGG--IIKDGFNDHVDRLRNI----SKNSKE  436

Query  495  TLIS-AARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTN  553
             LI    ++  L   K +K+  +  FGYY  VT     ++   + +       N  ++  
Sbjct  437  LLIQYEEKERNLTGIKNLKIGYNKVFGYYIEVTKSNYSLVP--ERYIRKQTLANAERYVT  494

Query  554  SKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSN  613
             +L  L +E    + +  E +  +  +I +     +E +Q     +A +DA+ SFAH++ 
Sbjct  495  EELKKLEDEIINAEQKLVELEYELFCQIRDKIESQIERIQKTASCIAIIDALCSFAHIA-  553

Query  614  GAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIA-FIPNDVYFEKDKQMFHIITGPNM  672
                 Y +P I+  G  RI +K  RH  VE     + F+PND   + D+    IITGPNM
Sbjct  554  -IDNRYTKP-IVYLGD-RIYIKNGRHPVVEKMIGYSNFVPNDTELDNDQNRVLIITGPNM  610

Query  673  GGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLET  732
             GKSTY+RQ  +IV+MAQ+GCFVP E A++ IVD I +R+GA D    G STFM EM E 
Sbjct  611  AGKSTYMRQVALIVIMAQMGCFVPAEEAQIGIVDKIFSRIGASDDISSGQSTFMVEMSEV  670

Query  733  ASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIA--TKIGAFCMFATHFHELTAL  790
            A+IL++AT  SLII DE+GRGTSTYDG  +AWA+ E++A  +KIGA  +FATH+HELT L
Sbjct  671  ANILKNATPKSLIIFDEVGRGTSTYDGLSIAWAVLEFVADKSKIGAKTLFATHYHELTEL  730

Query  791  ANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALE  850
              +I  V N  V      + +  L ++ +G CD S+GIHVA LA  P+ V++ A+Q   +
Sbjct  731  EEKISGVKNYRVDVKEEGKNIIFLRKIVRGGCDSSYGIHVARLAGIPEEVLQRAEQILKK  790

Query  851  LEEFQYIGESQGYDIMEPAAKKC--YLEREQGEKI------IQEFLSKVKQMPFTEMSEE  902
            LEE          DI    AK+    ++RE  E+I        E + K++ +    ++  
Sbjct  791  LEE---------ADINRKEAKRLRKEIKREFTEQIEFFSYKKDEIIEKIENLDILNITPI  841

Query  903  NITIKLKQLKAEVI  916
                 L +LK E+I
Sbjct  842  QALNILSELKHEII  855


>gi|76796368|ref|ZP_00778731.1|  MutS 1 protein [Thermoanaerobacter ethanolicus ATCC 33223]
Length=867

 Score =  295 bits (754),  Expect = 6e-78
 Identities = 244/835 (29%), Positives = 394/835 (47%), Gaps = 49/835 (5%)

Query  28   EKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMG-PAGAKNLQSVVLSKMNFE  86
            EK    +  F  GDFY    EDA +AA+E+      I   G  AG +    +     +  
Sbjct  15   EKYKDAILFFRLGDFYEMFYEDAEIAAKEL-----EIALTGRDAGTEERAPMAGVPYHAA  69

Query  87   SFVKDLLLVRQYRV---EVYKNRAGNKASKENDWYLAYKASPGNLSQFEDILFGNNDMSA  143
             F  D L+ + Y+V   E  ++ A  K   + D    Y  +PG +   E +    N+   
Sbjct  70   DFYIDKLIKKGYKVAICEQLEDPAKAKGLVKRDVVRIY--TPGTIINPESMDEKTNNYLV  127

Query  144  SIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKECVLPG  203
            S+           G+   G+  VD     L   E  +      +   + +  P E +   
Sbjct  128  SV---------FKGRDNYGICAVDVTTGDLYATELKNCKDIKRVYDEITKYAPSEII--A  176

Query  204  GETAGDMGKLRQIIQRGGILIT-ERKKADFSTKDIYQDLNRLLKGKKGEQMNSAVLPEME  262
             E      K  +I +     +    K+ D+  K     L      KK E++     P M 
Sbjct  177  NEDFLKNNKYIKIFKNNNCAVNIYEKQLDYEEKI---KLIETQFNKKSEELGIKDKPYMA  233

Query  263  NQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLFQGSVEDTTG  322
            N     SL+A+  +L+ L   +     +L  ++ + YM LD  A++ L + + +  + + 
Sbjct  234  N-----SLAALFSYLQELQKTALKHINKLLIYEDNSYMGLDSNAIKNLEILESN-RNKSK  287

Query  323  SQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLLR  382
              SL  +L+K  TP G RL+ +W+++PL+ K  I+ RL  VE    D + RQ L++  L 
Sbjct  288  KGSLLGVLDKTVTPMGGRLLKKWLEEPLLSKEHIDARLEAVEELFNDYKNRQDLKQ-FLN  346

Query  383  RFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVFVTPLTD  442
            +  DL RLA K   Q+ N +D   +   +  LP + + LEK   +  K +   F T    
Sbjct  347  KIYDLERLASKIVYQSINPKDFISIKLSLQNLPYIKEILEKFNSRLLKEICEKFDT----  402

Query  443  LRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIMNDLEKKMQSTLISAARD  502
            L+  +    + I+        E +  ++K  ++  + +LR+   + +  + +        
Sbjct  403  LQDIYELIDKSIKDDPSTQLKEGN--IIKGGYNEIVDKLRKASTEGKNWIANLEAEEREK  460

Query  503  LGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLnee  562
             G+   K +++  +  FGYY  VT  +  + +  + +       N  ++   +L  + E 
Sbjct  461  TGI---KNLRIGYNKVFGYYIEVT--KSNIPQVPERYIRKQTLANAERYVTPELKEIEET  515

Query  563  ytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRP  622
                + +  E +  +  EI       +  +Q     +A +D ++SFA V+      Y++P
Sbjct  516  ILGAEEKLIELEYQLFNEIREKVELQIVRIQNTAKYIATIDVLISFAEVAETNR--YIKP  573

Query  623  AILEKGQGRIILKASRHACVEVQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQT  682
             +      RI++K  RH  +E   + +F+ ND+    +  +  IITGPNM GKSTY+RQ 
Sbjct  574  IV--DYSDRIVIKEGRHPVIETISDESFVANDIDIGPENPIM-IITGPNMAGKSTYMRQV  630

Query  683  GVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKD  742
             +IVLMAQIG FVP   A++ IVD I  RVGA D    G STFM EM E A+IL+SAT  
Sbjct  631  ALIVLMAQIGSFVPASYAKIGIVDKIFTRVGASDDIFAGQSTFMVEMSEVANILKSATSK  690

Query  743  SLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHV  802
            SLII+DE+GRGTSTYDG  +A A+ EYI  KI A  +FATH+HELT L  ++  V N +V
Sbjct  691  SLIILDEVGRGTSTYDGMSIAHAVIEYIHEKIKAKTLFATHYHELTKLEGKMKGVRNYNV  750

Query  803  taltteetltMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEEFQYI  857
            +    E+ +  L ++  G  D+S+GI V++LA  P  ++E AK+    LE  + I
Sbjct  751  SVEEREDDIIFLRKIVPGGADKSYGIQVSKLAGLPYSIVERAKEILNSLENDKVI  805


>gi|89202593|ref|ZP_01181309.1|  MutS 1 protein [Bacillus cereus subsp. cytotoxis NVH 391-98]
Length=895

 Score =  293 bits (749),  Expect = 2e-77
 Identities = 210/652 (32%), Positives = 342/652 (52%), Gaps = 56/652 (8%)

Query  297  SQYMKLDIAAVRALNLFQG-SVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNR  355
            +Q+MK+D+ + R L L +    ++ TGS  L  LL+K KT  G R++ QW+++PL+ K +
Sbjct  251  NQFMKIDVHSKRNLELTETLRTKEKTGS--LLWLLDKTKTAMGGRMLKQWMERPLIQKEK  308

Query  356  IEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLP  415
            IEERL +VE FV D  LR+ L+E L   + DL RLA K    + N +D  +L + + Q+P
Sbjct  309  IEERLEMVETFVNDYFLREDLKEKLKEVY-DLERLAGKVAYGSVNARDLLQLKRSLQQVP  367

Query  416  NVIQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEF------L  469
             +++A+   +  +   L+            + +   E +   LD    EN         +
Sbjct  368  AILEAISLLDNSYAAKLI------------EGADPCEALTKLLDRSIQENPPLSVKDGDI  415

Query  470  VKPSFDPNLSELREIMNDLEKKMQSTLISAARDL-GLDPGKQIKLDSSAQFGYYFRVTCK  528
            +K  ++  L E R I  +  K   + L    R++ G+   K +K+  +  FGYY  VT  
Sbjct  416  IKDGYNEKLDEYRYISKN-GKTWIAELEKREREITGI---KSLKIGYNRIFGYYIEVTKA  471

Query  529  EEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGY  588
               +L   + +       N  +F   +L        + + +  + +  +   +      +
Sbjct  472  NLSLLPEGR-YERKQTLANAERFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVF  530

Query  589  VEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVE-VQDE  647
            +  +Q L  V+++LD + SFA VS      +V+P +  K +  I +K  RH  VE V D 
Sbjct  531  IPKLQHLAKVISELDVLQSFATVSEEER--FVKPVLTNKRE--IFIKDGRHPVVEKVLDG  586

Query  648  IAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDC  707
              ++PND    ++  +F +ITGPNM GKSTY+RQ  ++ +MAQIGCFVP   A + + D 
Sbjct  587  KLYVPNDCMMPENMDVF-LITGPNMSGKSTYMRQLALVTIMAQIGCFVPATEAILPVFDQ  645

Query  708  ILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAIS  767
            I  R+GA D  + G STFM EMLE  + + +A++ SLI+ DE+GRGTSTYDG  LA AI 
Sbjct  646  IFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAII  705

Query  768  EYIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFG  827
            E+I  +IGA  +F+TH+HELT L   +  + N+HV+A+  +  +  L+++++G  D+S+G
Sbjct  706  EHIHDQIGAKTLFSTHYHELTVLEESLTHLKNVHVSAIEEDGKVVFLHKIQEGAADKSYG  765

Query  828  IHVAELANFPKHVIECAKQKALELEEFQYIGESQGYDIME-------------PAAKKCY  874
            IHVA+LA  P  +I  AK+   +LE  + I   +  ++ E             P  K+  
Sbjct  766  IHVAQLAELPDSLIARAKEVLAQLEGQEEITIPKRTEVKEQPERMQQPVIEEQPVIKEVA  825

Query  875  LEREQGEKIIQEFLSKVKQMPFTEMSEENITIKLKQLKAEVIAKNNSFVNEI  926
              +++ E+I++E      Q+ F E  E       KQ K  + AK  + + +I
Sbjct  826  EVQQESEEIVEE-----SQLSFFETEER----MEKQEKPVLDAKETAVLAQI  868


>gi|20807804|ref|NP_622975.1|  DNA mismatch repair protein [Thermoanaerobacter tengcongensis 
MB4]
Length=869

 Score =  292 bits (748),  Expect = 3e-77
 Identities = 242/833 (29%), Positives = 396/833 (47%), Gaps = 52/833 (6%)

Query  28   EKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMG-PAGAKNLQSVVLSKMNFE  86
            EK    +  F  GDFY    EDA +AA+E+      I   G  AG +    +     +  
Sbjct  18   EKYKDAILFFRLGDFYEMFYEDAEIAAKEL-----EIALTGRDAGTEERAPMAGVPYHAA  72

Query  87   SFVKDLLLVRQYRVEVYKNRAGNKASK---ENDWYLAYKASPGNLSQFEDILFGNNDMSA  143
             F  D L+ + Y+V + +       +K   + D    Y  +PG +   E +   +N+   
Sbjct  73   DFYIDKLVKKGYKVAICEQLEDPSKAKGLVKRDVVRIY--TPGTIINPESMDEKSNNYLV  130

Query  144  SIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKECVLPG  203
            S+            +   G+  VD    +L   E  +      +   + +  P E +   
Sbjct  131  SV---------YREKDNYGICAVDVTTGELYATEIKNCKNGKRIYDEIAKYSPSEII--S  179

Query  204  GETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLKGKKGEQMNSAVLPEMEN  263
             E      K  ++ +     +   K  ++       +L      KK E++      E+E+
Sbjct  180  NEEFLKNNKYIKVFKNNNCAVNAYKPLNYEASS---ELIEKQFDKKVEEL------ELED  230

Query  264  Q-VAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLFQGSVEDTTG  322
            +   + SL A++ +L+ L   S     +LT +  + YM LD  A+R L + + +  + + 
Sbjct  231  KKFVIHSLGALLSYLKELQKTSLKHINKLTLYQDNSYMGLDSNAIRNLEILESN-RNKSK  289

Query  323  SQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLLR  382
              SL  +L++  TP G RL+ +W+++PL+DK+ IE+RL+ VE    +   R  L+E LL 
Sbjct  290  KGSLLGVLDRTVTPMGGRLLKKWLEEPLIDKDEIEKRLDAVEELFNNYRERIELKE-LLN  348

Query  383  RFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVFVTPLTD  442
            +  DL RLA K   Q+   +D   +   +  LP +   L K   +    LL      L  
Sbjct  349  KVYDLERLASKIVYQSVTPKDFISIKLSLQNLPKIKNILSKFSSR----LLKEIYEKLDV  404

Query  443  LRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIMNDLEKKMQSTLISAARD  502
            L+  +    + I+        E +  ++K  ++  + +LR+   + +  + +        
Sbjct  405  LQDVYELIDKSIKDDPSNQLKEGN--IIKDGYNEMVDKLRKASTEGKNWIANLEADEREK  462

Query  503  LGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLnee  562
             G+   K +++  +  FGYY  VT  +  + +    +       N  ++   +L  + E 
Sbjct  463  TGI---KNLRIGYNKVFGYYIEVT--KSNIPQVPDRYIRKQTLANAERYVTPELKEIEET  517

Query  563  ytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRP  622
                + +  E +  +  EI       +  +Q     +A +D ++SFA V+      YV+P
Sbjct  518  ILGAEEKLIELEYELFNEIREKVELQIVRIQNTAKYIAIIDVLISFAEVAETNK--YVKP  575

Query  623  AILEKGQGRIILKASRHACVEVQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQT  682
             +    + RI++K  RH  VE   +  F+ ND+    +  +  IITGPNM GKSTY+RQ 
Sbjct  576  IV--DYEDRIVIKEGRHPVVETISDEGFVANDIDIGPENPIM-IITGPNMAGKSTYMRQV  632

Query  683  GVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKD  742
             +IVLMAQ+GCFVP   A + IVD I  RVGA D    G STFM EM E A+IL SAT  
Sbjct  633  ALIVLMAQVGCFVPASYARIGIVDKIFTRVGASDDIFAGQSTFMVEMSEVANILHSATSK  692

Query  743  SLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHV  802
            SLII+DE+GRGTSTYDG  +A A+ EYI  KI A  +FATH+HELT L  ++  V N +V
Sbjct  693  SLIILDEVGRGTSTYDGMSIAQAVIEYIHEKIKAKTLFATHYHELTKLEGKLRGVRNFNV  752

Query  803  taltteetltMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQ--KALELEE  853
            +    E+ +  L+++  G  D+S+GI V++LA  P  +IE AK+  +ALE ++
Sbjct  753  SVEEREDDIIFLHKIVPGGSDRSYGIQVSKLAGLPYSIIERAKEILEALERDK  805


>gi|73669015|ref|YP_305030.1|  DNA mismatch repair protein [Methanosarcina barkeri str. fusaro]
Length=900

 Score =  291 bits (746),  Expect = 5e-77
 Identities = 238/854 (27%), Positives = 403/854 (47%), Gaps = 50/854 (5%)

Query  21   RFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMGPAGAKNLQSVVL  80
            ++++     P T +  F  GDFY + GEDA   A+E+      I        K+ + + L
Sbjct  11   QYYEAKQAYPDTLI-FFRMGDFYESFGEDAKTIAKEL-----EITLTARGKDKSGERMPL  64

Query  81   SKMNFESFVKDL--LLVRQYRVEVYKNRAGNKASKEN-DWYLAYKASPGNL---SQFEDI  134
            + + + +    L  L+ + Y+V + +     K +K      +    +PG     S F D 
Sbjct  65   AGIPYHAIDTYLPRLINKGYKVAICEQLEDPKKAKGIVKRGVVRVVTPGTAIDSSMFSDA  124

Query  135  LFGNNDMSASIG-VVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQ  193
               NN + A  G  +G      + + ++GV ++D    +    +F D++ F  L + L +
Sbjct  125  --SNNYLMAVAGREIGKPGKNAENEFEIGVSFLDISTGEFLTTQFRDSENFEKLLSELAR  182

Query  194  IGPKECVLPGG----ETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLKGKK  249
            + P EC+LP          +  + + I+Q     I+  K+A    K+ ++     L+G  
Sbjct  183  MRPSECILPSSLYENPALAERLRAQTIVQEFAPDISGAKEAGERLKNHFRVAT--LEGMG  240

Query  250  GEQMNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRA  309
             E ++ AV        A    +   +  EL   ++      L T+  S++M LD   +R 
Sbjct  241  CENLDFAVYSAW----AALEYAQTTQMRELTHINT------LRTYSNSEFMILDSVTLRN  290

Query  310  LNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVED  369
            L + + +V D     SL  +LN  KTP G R + +W+ +PL+   +I  RL+ VE     
Sbjct  291  LEIVK-NVRDEGDENSLYRILNHTKTPMGSRALKKWLLKPLLSVEKINYRLDAVEELTAK  349

Query  370  AELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQ  429
              LR  L+ + L    D+ RL  +     +N +D   L + +  LP V  +L ++     
Sbjct  350  PLLRYDLR-NWLSDVRDIERLVGRVVYGNSNARDLVALKKSLEALPPVRDSLLENIESTI  408

Query  430  KLLLAVFVTPLTDLRSDFSKFQEMIETTL-DMDQVENHEF-LVKPSFDPNLSELREIMND  487
               +AV +   ++L +      EMI+  + D   +   E  ++K  ++  L EL++I ++
Sbjct  409  LNDIAVGLASFSELEN----LAEMIDRAIVDEPPISVREGGMIKSGYNAELDELKDIASN  464

Query  488  LEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKN  547
              + + +         G+   K +K+  +  FGYY  VT      +   +++       N
Sbjct  465  SRQWIANFQQKERERSGI---KSLKVGYNKIFGYYIEVTNANSSQVP--EDYIRKQTMAN  519

Query  548  GVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVS  607
              +F   +L            +    +  I  EI+   S +   +Q   + +  LD +  
Sbjct  520  AERFFTPELKEKESLILTANEKAIALEYEIFTEILQTLSAHSRELQETAERIGTLDVLTD  579

Query  608  FAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYFEKDKQMFHII  667
             A V+      Y+RP + +    +I+++  RH  VE      F+PND   +  +  F ++
Sbjct  580  LAEVAENNN--YIRPQLTD--DCKILIRDGRHPVVENTVHGGFVPNDTEMDCKENQFLLV  635

Query  668  TGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMA  727
            TGPNM GKSTY+RQT +I +MAQ+G FVP   A + I+D +  R+GA D    G STFM 
Sbjct  636  TGPNMAGKSTYMRQTALIAIMAQVGSFVPASYASIGIIDQVFTRIGAFDDLASGQSTFMV  695

Query  728  EMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIAT--KIGAFCMFATHFH  785
            EM+E A+IL +A+  SL+++DE+GRGTSTYDG+ +A A+ E++    K+G   +FATH+H
Sbjct  696  EMVELANILNNASPRSLVLLDEIGRGTSTYDGYSIAKAVVEFLHNRGKVGVRALFATHYH  755

Query  786  ELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKHVIECAK  845
            +LTAL  ++  V N HV        L  L ++  G  D+S+GI VA LA  P+ VIE A 
Sbjct  756  QLTALEEKLKRVKNYHVAVKEEGHELVFLRKIVPGATDRSYGIQVARLAGVPEKVIERAN  815

Query  846  QKALELEEFQYIGE  859
            +   ELE    + E
Sbjct  816  EILKELERENVLEE  829


>gi|87310334|ref|ZP_01092464.1|  DNA mismatch repair protein [Blastopirellula marina DSM 3645]
Length=873

 Score =  291 bits (744),  Expect = 9e-77
 Identities = 243/822 (29%), Positives = 393/822 (47%), Gaps = 44/822 (5%)

Query  34   VRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMGPAGAKNLQSVVLSKMNFESFVKDLL  93
            +  F  GDFY    +DA  AAR +    G+       G              ++++  L+
Sbjct  21   ILFFRMGDFYELFNDDAKTAARVL----GMTLTSRDKGENATPMAGFPHHQLDNYLGKLI  76

Query  94   LVRQYRVEVYKNRAGNKASKEN-DWYLAYKASPGNLSQFEDILFGNNDMSASIGVVGVKM  152
             +  YRV +       K +K      +    +PG L+    +    ++  A++ + G K 
Sbjct  77   HLG-YRVAICDQVENPKEAKGIVRREITRIVTPGTLTDDALLEPRESNYLAAVALPGKKE  135

Query  153  SAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKECVLPGGETAGDMGK  212
            +A +    VGV +V+    +     FP     + L   L +I P EC++P      +   
Sbjct  136  TAAE----VGVAWVEMSTGRFFSGVFPT----ARLADQLARIAPSECLVP------EESN  181

Query  213  LRQIIQRGGILITERKKADFSTKDIYQDLNRLLKGKKGEQMNSAVLPEMENQVAVSSLSA  272
            +        IL+T R    F  +   + L R  +    E          ++Q+AV +  A
Sbjct  182  VVPTHLHESILMTYRPAWAFGKEGAGEVLKRHFETMTLEGFGFGD----QDQLAVCAAGA  237

Query  273  VIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLFQGSVEDTTGSQSLAALLNK  332
            V+++LE     S      LT +  S  +++D A  R+L L + ++ D     SL A +++
Sbjct  238  VLEYLEETQRTSLLHIERLTPYRASSTLEIDEATRRSLELTR-TMRDGRRDGSLLAAIDR  296

Query  333  CKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAK  392
            C T  G RL+  W+  PL D   I  RL+ VE  V +  L + L+E L   + DL RL  
Sbjct  297  CVTVMGSRLLGDWLSNPLTDLEEIHRRLDGVEELVLEPALARDLRESLKEVY-DLERLLA  355

Query  393  KFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVFVTPLTDLRSDF-SKFQ  451
            +     A+ +D   + + + +LP++   +        +LL         DL S+  S+  
Sbjct  356  RVMTGRASPRDLGYICKTLERLPHIKAKITSRRSSMLRLL-----EERLDLCSEIRSQLA  410

Query  452  EMIETTLDMDQVENHEFLVKPSFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQI  511
            E ++ +L +   +    ++   F+ +L  LR +    ++ +           G+     +
Sbjct  411  EALDDSLPLSPRDGG--VICTGFNADLDHLRGLAAGGKQWIAEYQKQEIERTGI---ANL  465

Query  512  KLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteye  571
            K+  +  FGYY  VT    +  R   ++      KN  ++   +L    E+      + +
Sbjct  466  KVGFNKVFGYYLEVTNVNRE--RIPTDYIRKQTLKNAERYITPELKEYEEKVLSADEKAK  523

Query  572  eAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGR  631
            + +  +  ++ +      + +Q   DVLA LD ++S A ++      Y RP + E    R
Sbjct  524  DLEYELFGQLRDAVQLDAKRIQQTADVLANLDCLLSLAELARERN--YCRPQVGESAVLR  581

Query  632  IILKASRHACVEVQD-EIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQ  690
            I+    RH  +++++ E  F+PND   + +     +ITGPNM GKSTYIRQ  +I LMAQ
Sbjct  582  IL--DGRHPVLDLKEIEGGFVPNDAQLDSESGFIGLITGPNMAGKSTYIRQVALISLMAQ  639

Query  691  IGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDEL  750
            +G FVP   A++ IVD I ARVGA D   +G STFM EM ETA IL +AT  SL+I+DE+
Sbjct  640  MGSFVPAREADLGIVDRIFARVGASDELSRGQSTFMVEMTETARILNTATNRSLVILDEI  699

Query  751  GRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteet  810
            GRGTSTYDG  LAW+I EY+  KIG   +FATH+HELT L + +P V NL+V     ++ 
Sbjct  700  GRGTSTYDGVSLAWSIVEYLHDKIGCRTLFATHYHELTDLRSSLPGVVNLNVAVKEWDDK  759

Query  811  ltMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELE  852
            +  L+++  G  D+S+GI+VA LA  P+ V E AKQ   +LE
Sbjct  760  VIFLHKIVPGAADKSYGIYVARLAGVPREVNERAKQILNQLE  801


>gi|21227785|ref|NP_633707.1|  DNA mismatch repair protein [Methanosarcina mazei Go1]
Length=900

 Score =  289 bits (740),  Expect = 3e-76
 Identities = 243/926 (26%), Positives = 427/926 (46%), Gaps = 73/926 (7%)

Query  21   RFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMGPAGAKNLQSVVL  80
            ++++     P T +  F  GDFY + GEDA   A+E+      I        ++ + + L
Sbjct  11   QYYEAKQAYPDTLI-FFRMGDFYESFGEDAKTIAKEL-----EITLTARGKDRSGERMPL  64

Query  81   SKMNFESFVKDL--LLVRQYRVEVYKNRAGNKASKEN-DWYLAYKASPGNL---SQFEDI  134
            + + + +    L  L+ + Y+V + +     K +K      +    +PG     S F D 
Sbjct  65   AGIPYHAIDTYLPRLINKGYKVAICEQLEDPKQAKGVVKRGVVRVVTPGTAIDSSMFPDA  124

Query  135  LFGNNDMSASIGV-VGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQ  193
               NN + A  G  VG    + + + + G+ ++D    +    +F D+  F  L + L +
Sbjct  125  --SNNYLMAVAGKEVGKTGKSGEKEMEFGLSFLDISTGEFLTTQFTDSGSFDKLLSELAR  182

Query  194  IGPKECVLP----GGETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLKGKK  249
            + P EC+LP    G     D  + + I+Q     I+  ++A    K  ++     L+G  
Sbjct  183  MKPAECILPPTLYGNSVLVDRLREQTIVQEFAPEISGIEEAGEKLKIHFRVST--LEGMG  240

Query  250  GEQMNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRA  309
             E++          +  V S  + +++ +            L T+  +++M LD   +R 
Sbjct  241  CEKL----------EFGVYSAWSALEYAKTTQMRDLAHINTLRTYSNTEFMVLDSVTLRN  290

Query  310  LNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVED  369
            L + + +V D     SL   L+  KTP G R++ +W+ +PL+   +I  RL+ VE    +
Sbjct  291  LEIVK-NVRDEGDHNSLYRTLSFTKTPMGSRILKKWLLKPLLSVEQINHRLDAVEELAGN  349

Query  370  AELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQ  429
              LR  ++ D L    D+ RL  +     AN +D   L + ++ +P++   L +  G   
Sbjct  350  PLLRYDIR-DWLSEVRDIERLVGRIVYGNANARDLVALKKSLDAVPSIRDCLLEKAG---  405

Query  430  KLLLAVFVTPLTDLRSDFSKFQEMIE----TTLDMDQVENHEF-LVKPSFDPNLSELREI  484
                A  +  + +  + FS+ +E+ +      ++   V   E  ++K  F   L ELR+I
Sbjct  406  ----AEMLKGIAEGLASFSEIEELAKMIGNAIVEEPPVSVREGGMIKSGFSEELDELRDI  461

Query  485  MNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDI  544
             ++ ++ + +         G+   K +K+  +  FGYY  VT      + ++  +     
Sbjct  462  SSNSKQWIAAFQQKEKDRTGI---KSLKIGYNKVFGYYIEVTNANSSQVPDD--YIRKQT  516

Query  545  QKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDA  604
              N  +F   +L            +    +  I  EI    S + + +Q   + +  LD 
Sbjct  517  MANAERFFTPELKEKESLILTANDKAVALEYEIFTEITETLSAHSKELQETAERIGVLDV  576

Query  605  VVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYFEKDKQMF  664
            +   A V+      Y RP + E    +I+++  RH  VE      F+PND   +  +  F
Sbjct  577  LADLAEVAENNN--YTRPQLTE--DCKILIRDGRHPVVESTVSGGFVPNDTEMDCKENQF  632

Query  665  HIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVST  724
             ++TGPNM GKSTY+RQT +I +MAQ G FVP   A + ++D +  R+GA D    G ST
Sbjct  633  LLVTGPNMAGKSTYMRQTALIAIMAQAGSFVPASYASIGVIDQVFTRIGAFDDLASGQST  692

Query  725  FMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIAT--KIGAFCMFAT  782
            FM EM+E A+IL +A+  SL+++DE+GRGTSTYDG+ +A A+ E++    K+G   +FAT
Sbjct  693  FMVEMVELANILNNASPKSLVLLDEIGRGTSTYDGYSIAKAVVEFLHNRGKVGIRALFAT  752

Query  783  HFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKHVIE  842
            H+H+LT+L  ++  V N H+        L  L ++  G  D+S+GIHVA LA  P+ VIE
Sbjct  753  HYHQLTSLEEKLKRVKNYHIAVKEEGHELVFLRKIVPGATDRSYGIHVARLAGVPEKVIE  812

Query  843  CAKQKALELEEFQYIGESQGYD-----------------IMEPAAKKCYLEREQGEKIIQ  885
             A +   ELE    + ES+  +                 + +P ++    E ++G   ++
Sbjct  813  RANEILRELERESVLEESEDCENGKKRKGKATTRYTQMLLFDPGSRSGNSEVKRGLSPVE  872

Query  886  EFLSKVKQMPFTEMSEENITIKLKQL  911
              L K+     T +   N   +LK+L
Sbjct  873  AALKKMNVDEMTPIEAMNKLHELKKL  898


>gi|18310137|ref|NP_562071.1|  DNA mismatch repair protein [Clostridium perfringens str. 13]
Length=909

 Score =  288 bits (738),  Expect = 4e-76
 Identities = 212/680 (31%), Positives = 351/680 (51%), Gaps = 42/680 (6%)

Query  248  KKGEQMNSAVLPEMENQVAV---SSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDI  304
            +K E++ +A   E  N +++    S +A++K++      S     ++  +    +M +D+
Sbjct  206  EKFEEVLNAQFGEKSNSLSLMVKKSSNALVKYILDTQKISLTNINDIEVYSLVDFMTIDL  265

Query  305  AAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVE  364
            ++ R L L + ++ + +   SL  +L+K +T  G R++ +WI++PL++K +I  RLN VE
Sbjct  266  SSRRNLELTE-NLREKSKKGSLLWVLDKTETSMGSRMLRRWIEEPLVNKEKITLRLNAVE  324

Query  365  AFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKH  424
                D  L  +L+E  L    D+ R+  K   + AN +D   L   I ++PNV   +E  
Sbjct  325  ELFNDLSLNDSLKE-ALHDIYDIERILGKISNKNANAKDLIALKTSIGKIPNVKGIIENC  383

Query  425  EGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREI  484
                   LL  +   L DLR  +   ++ I+    +   +    L+K  F+  + ELR +
Sbjct  384  TSS----LLRNYHHNLDDLRDIYELLEKSIKEDPSLTLKDGD--LIKDGFNSEIDELR-L  436

Query  485  MNDLEKKMQSTLISAARDL-GLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVD  543
                 K   S+L +  R+  G+   K +K+  +  FGYY  ++      +   +      
Sbjct  437  AKTNGKDWISSLENREREFTGI---KSLKVGFNKVFGYYIEISKANYSSIPEGRYIRKQT  493

Query  544  IQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLD  603
            +  N  +F   +L  + E+      +    +  I  +I N    +++ ++T   ++A+LD
Sbjct  494  LA-NAERFITPELKEIEEKLLGASEKLCSLEYDIFLDIRNEVENHIDRLKTTAKIIAELD  552

Query  604  AVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVE-VQDEIAFIPNDVYFEKDKQ  662
             + + A V+      +++P I E G+ +I  +  RH  VE V  +  FIPND    KD  
Sbjct  553  CISNLAFVA--LENDFIKPEINEDGETKI--ENGRHPVVEKVIPKGEFIPNDTIINKDDN  608

Query  663  MFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGV  722
               IITGPNM GKSTY+RQ  +I LM QIG FVP   A +S+VD I  R+GA D    G 
Sbjct  609  QLLIITGPNMAGKSTYMRQVAIITLMCQIGSFVPASKANISVVDKIFTRIGASDDLAGGK  668

Query  723  STFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFC--MF  780
            STFM EM E ++IL++AT++SL+++DE+GRGTSTYDG  +AW++ EYI       C  +F
Sbjct  669  STFMVEMWEVSNILKNATENSLVLLDEVGRGTSTYDGLSIAWSVIEYICKNKNLRCKTLF  728

Query  781  ATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKHV  840
            ATH+HELT L  +I  V N  V     +  +  L ++ +G  DQS+GI VA+LA  P  V
Sbjct  729  ATHYHELTKLEGEIHGVRNYSVAVKEVDNNIIFLRKIIEGGADQSYGIEVAKLAGIPDDV  788

Query  841  IECAKQ--KALELEEFQYIGESQGYDIMEPAAKKCYLEREQGEKIIQEFLSKVKQMPFTE  898
            I  AK+  + LE+E  +        D ++ A K+    +E+ ++       +VK+   T 
Sbjct  789  INRAKEILEKLEMESSK--------DNLDLALKEVNASKEEMKEASITSSYEVKE---TL  837

Query  899  MSEENITIKLKQLKAEVIAK  918
            + E+ I     ++K EVI+K
Sbjct  838  VEEDKI-----EIKEEVISK  852


>gi|23099086|ref|NP_692552.1|  DNA mismatch repair protein [Oceanobacillus iheyensis HTE831]
Length=867

 Score =  288 bits (737),  Expect = 6e-76
 Identities = 200/645 (31%), Positives = 331/645 (51%), Gaps = 30/645 (4%)

Query  261  MENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLFQGSVEDT  320
            + ++  + + S ++ +++     S     +    +  +YM LD+ + R L L + ++   
Sbjct  215  LNDERLMKAFSRLLNYIQTTQKRSLHHLQKAEVIELKKYMSLDMYSKRNLELTE-TIMKK  273

Query  321  TGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDL  380
            +   SL  +L+K  T  G R + +W+++PL+ K +I ERL +V+ F +    R++L+ DL
Sbjct  274  SKHGSLLWVLDKTVTAMGARTLKKWLERPLLSKQKINERLEVVQGFYDGFMERESLR-DL  332

Query  381  LRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVFVTPL  440
            L+   DL RL+ +      N +D  +L Q ++++P + + L + +      L  + + P 
Sbjct  333  LKSVYDLERLSGRIAFGNVNARDLIQLKQSLSRIPAIQETLRQFDQPEITRLAEMLIYPE  392

Query  441  TDLRSDFSKFQEMIETTLDMDQVENHE-FLVKPSFDPNLSELREIMNDLEKKMQSTLISA  499
              + S       + ++ +D   +   E  L+K  +   L   R+   + +K +       
Sbjct  393  QMVES-------LEKSIVDEPPISIKEGSLIKEGYHDQLDTYRDASRNGKKWIAQLEHQE  445

Query  500  ARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSL  559
              + G+   + +K+  +  FGYY  +T     +L   + +       N  +F N +L   
Sbjct  446  REETGI---RSLKVGYNRVFGYYIEITKPNLHLLPEGR-YERRQTLTNAERFVNEELKEK  501

Query  560  neeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPY  619
             +   + + +  E +  +  +I +     +  +Q L  +++Q+D + SFA VS      Y
Sbjct  502  EKLILEAEEKSVELEYDLFIQIRDQIKEEIPLIQQLAHIISQMDVLQSFATVSESNN--Y  559

Query  620  VRPAILEKGQGRIILKASRHACVE-VQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTY  678
            VRP   ++   ++ +   RH  VE V  +  F+PNDV F+K + M  +ITGPNM GKSTY
Sbjct  560  VRPDFNDE---QLQVTKGRHPVVEQVMKDGTFVPNDVVFDKSQNML-LITGPNMSGKSTY  615

Query  679  IRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRS  738
            +RQ  +  +M QIGCF+P E A + + D I  R+GA D  + G STFM EMLE    + +
Sbjct  616  MRQVALTSIMGQIGCFIPAEQATLCVFDQIFTRIGAADDLVSGQSTFMVEMLEARHAISN  675

Query  739  ATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPTVN  798
            AT  SLI++DE+GRGTSTYDG  LA AI EYI   I A  +F+TH+HELTAL + +  + 
Sbjct  676  ATDRSLILLDEIGRGTSTYDGMALAQAIVEYIHHNIAAKTLFSTHYHELTALEDSLHHLK  735

Query  799  NLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEEFQYIG  858
            N+HV A   E  +  L+Q+K+G  DQS+GIHVA+LA+ P  +IE A     ELE+     
Sbjct  736  NIHVRAEEHEGNVVFLHQIKEGAADQSYGIHVAKLADLPNELIERASVILEELEDDSN--  793

Query  859  ESQGYDIMEPAAKKCYLEREQGEKIIQEFLSKVKQMPFTEMSEEN  903
                    +P   K  LE  Q    I+E   K  +MP  E +  N
Sbjct  794  -------KKPTPTKDKLESGQLSFFIEESNKKKAEMPKQEKTHNN  831


>gi|67916815|ref|ZP_00510508.1|  MutS 1 protein [Clostridium thermocellum ATCC 27405]
Length=870

 Score =  287 bits (735),  Expect = 1e-75
 Identities = 227/723 (31%), Positives = 354/723 (48%), Gaps = 67/723 (9%)

Query  152  MSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKECVLPGGETAGDMG  211
            MS    +   G+  VD    +         + F+ L   + +  P E V+  GE   D  
Sbjct  128  MSIYKNKNYYGIACVDLTTGEFLSTHITFGNTFNKLMDEIAKFSPSEIVV-NGEFFHDEN  186

Query  212  KLRQIIQRGGILITERKKADFSTKDIYQDLNRLLKGKKGEQMNSAVLPEMENQVAVSSLS  271
              + + QR  + I+  +   F  +   Q +    K          V+ E    + +++  
Sbjct  187  IKKTLKQRFDVYISGLEDKFFEKEFSIQKVRNYFK--------DYVIEENAFDLYINASG  238

Query  272  AVIKFLEL-----LSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLFQGSVEDTTGSQSL  326
            A++++LE      LS   NF  + +      +YM LD+A  R L L + ++ +     SL
Sbjct  239  ALLEYLEQTQKVNLSHIQNFNVYRI-----EEYMILDMATRRNLELTE-TMREKNRKGSL  292

Query  327  AALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPD  386
              +L++  T  G R + +WI+QPL++ + I++RL+ V  F E   +R  ++E LLR   D
Sbjct  293  LWVLDRTMTSMGGRTLRKWIEQPLINLHDIKDRLDAVNEFKERFMIRSEVRE-LLRAVYD  351

Query  387  LNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVFVTPLTDLRSD  446
            + RL  K    +AN +D   +   I Q+P + + L   +     L      T LTD+   
Sbjct  352  IERLMTKVILGSANCRDLISIKHSIGQVPYIKELLRDLKADLNVLSYNELDT-LTDV---  407

Query  447  FSKFQEMIETTL--DMDQVENHEFLVKPSFDPNLSELREIMNDLEKKMQSTLISAARD-L  503
                 E+I+  +  D         ++K  F+  +  LR    D  KK  + L S  R+  
Sbjct  408  ----YEIIDKAIVDDPPVAVKEGGIIKEGFNEEVDRLRSASKD-GKKWIAHLESKERERT  462

Query  504  GLDPGKQIKLDSSAQFGYYFRVTCK----------EEKVLRNNKNFSTVDIQK--NGVKF  551
            G+   K +K+  +  FGYY  VT             ++ L N + + T ++++  N V  
Sbjct  463  GI---KNLKVGFNKVFGYYIEVTKSYYSQVPDDYIRKQTLANCERYITPELKEIENTVLG  519

Query  552  TNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHV  611
               +L  L              +  I  ++ N  +  +  ++T    LA++D + S A V
Sbjct  520  AEDRLVEL--------------EYQIFVDVRNKVAKEINRLKTTARSLARIDVLCSLAEV  565

Query  612  SNGAPVPYVRPAILEKGQGRIILKASRHACVE-VQDEIAFIPNDVYFEKDKQMFHIITGP  670
            ++     Y  P + +    +I +K  RH  VE +  + AF+PND Y + D+    IITGP
Sbjct  566  ADRES--YTMPEVTD--DDKIEIKDGRHPVVEKIIGQEAFVPNDTYLDMDENQIAIITGP  621

Query  671  NMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEML  730
            NM GKSTY+RQ  +IVLMAQIG FVP +SA++ IVD I  RVGA D    G STFM EM 
Sbjct  622  NMAGKSTYMRQVALIVLMAQIGSFVPAKSAKIGIVDRIFTRVGASDDLAAGQSTFMVEMS  681

Query  731  ETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTAL  790
            E A+IL +AT  SL+++DE+GRGTSTYDG  +AWA+ EYI  KIGA  +FATH+HELT L
Sbjct  682  EVANILGNATSKSLLVLDEIGRGTSTYDGLSIAWAVIEYIGEKIGARTLFATHYHELTEL  741

Query  791  ANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALE  850
              +I  + N  ++     E +  L ++ +G  D S+G+ VA LA  P  VI  AK+   +
Sbjct  742  EERIEGIKNYCISVEEKGEDIIFLRKILRGGADNSYGVQVARLAGIPDPVIHRAKEILKK  801

Query  851  LEE  853
            LE+
Sbjct  802  LED  804


>gi|71541561|ref|ZP_00663303.1|  MutS 1 protein [Syntrophomonas wolfei str. Goettingen]
Length=859

 Score =  287 bits (735),  Expect = 1e-75
 Identities = 239/836 (28%), Positives = 397/836 (47%), Gaps = 55/836 (6%)

Query  28   EKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMGPAGAKNLQSVVLSKMNFES  87
            E+    +  F  GDFY    EDA +A+RE+     +    G AG+K    + +  + + S
Sbjct  16   EEQQDAILFFRLGDFYEMFFEDARIASRELEIV--LTARDGGAGSK----IPMCGVPYHS  69

Query  88   FVKDL--LLVRQYRVEVYKNRAGNKASKEN-DWYLAYKASPGNLSQFEDILFGNNDMSAS  144
                L  L+ R Y+V + +     + +K      +    +PG + + + +    N+  A+
Sbjct  70   VDNYLARLINRGYKVAICEQVEDPREAKGIVKREVTRIVTPGTIIEEQLLDQAKNNFLAA  129

Query  145  IGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKECVLPG-  203
            +          +     G+ Y+D    +  L E    +  S +E+ +++I P EC+L G 
Sbjct  130  VE---------EEPLCTGIAYIDISTGEFWLSEIAGENARSRVESEILRISPAECLLAGS  180

Query  204  GETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLKGKKGEQMNSAVLPEMEN  263
            G   G   +  + +++  I +T   +   S +     L R L+    E            
Sbjct  181  GSLTGSWEE--EWLRQQNITLTVWDELPLSLERAESLLLRQLQVASLESFGLK-----SY  233

Query  264  QVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLFQGSVEDTTGS  323
               + + + +I FLE     S      L  +    ++++D  + R L L   ++ +    
Sbjct  234  SAGIKAAARIIAFLEETQKTSLQHIKSLRCYSSDNFLEMDFYSRRNLEL-TATLREGKRE  292

Query  324  QSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLLRR  383
             SL ++L++ +T  G+RL+ +WI+QPL +   IEERL+ V+       LR  L   LL R
Sbjct  293  GSLLSILDESRTAMGKRLLRRWIEQPLREAGEIEERLDAVDELKNTLSLRTELTP-LLSR  351

Query  384  FPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVFVTPLTDL  443
              DL RL  K     A+ +D   L   +  + ++ +AL+    +  + L A     +  L
Sbjct  352  INDLERLGGKIGASVASPRDLLGLKSSLAVINDIKKALQPCRSEILQRLAA-----MDAL  406

Query  444  RSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIMNDLEKKMQSTLISAARDL  503
               F+     I     +   E    L+K  +   + ELRE+  +    +        +  
Sbjct  407  EEVFALIDASINDEAPLGIKEGE--LIKTGYKQEIDELRELSQEGSNWLVEFENREKQRT  464

Query  504  GLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQK-----NGVKFTNSKLTS  558
            G+   K +K+  +  FGYY  +T       ++N + +  D  +     N  +F + +L  
Sbjct  465  GI---KNLKVGFNKVFGYYIEIT-------KSNLSLAPADYHRKQTLVNSERFISDELKQ  514

Query  559  LneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVP  618
              E+   ++      +     +I      Y+  +      +A LD +   A V+      
Sbjct  515  YEEKILGSRERLYSLEYQEFIKIREALIPYLPRVMETAHAIAILDVLQGLAEVAYQNN--  572

Query  619  YVRPAILEKGQGRIILKASRHACVE-VQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKST  677
            Y+RP I     G+I ++A RH  VE    E  F+PND+  ++DK  F IITGPNMGGKST
Sbjct  573  YIRPEI--DNSGKIRIRAGRHPVVEKALREARFVPNDLQLDRDKARFAIITGPNMGGKST  630

Query  678  YIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILR  737
            ++RQ  ++VLMAQ+G F+P E A + +VD I  RVGA D    G STFM EM+E A+IL 
Sbjct  631  FMRQAALLVLMAQMGSFIPAEEARIGLVDKIFTRVGASDDLAAGQSTFMVEMIEVANILN  690

Query  738  SATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPTV  797
            +A+ +SL+I+DE+GRGTSTYDG  +A A+SEY+     +  +FATH+H+LT LA ++P +
Sbjct  691  NASDNSLVILDEIGRGTSTYDGLSIAQAVSEYLLENSRSKVLFATHYHQLTRLAEKLPGI  750

Query  798  NNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEE  853
             NL V+   T  T+  L +V  G  D+S+G+HVA LA  P+ +I  A+     LE+
Sbjct  751  INLSVSVKETGNTVVFLKKVLPGKADKSYGLHVARLAGLPEKLIIRAEDILQGLEK  806


>gi|16078767|ref|NP_389586.1|  DNA mismatch repair protein [Bacillus subtilis subsp. subtilis 
str. 168]
Length=858

 Score =  283 bits (724),  Expect = 2e-74
 Identities = 233/840 (27%), Positives = 394/840 (46%), Gaps = 66/840 (7%)

Query  37   FDRGDFYTAHGEDALLAAREVFKTQGVIKYMGPAGAKNLQSVVLSKMNFESFVKDLLLVR  96
            F  GDFY    EDA  A++E+  T   +       A+ +    +   +  ++++ L+  +
Sbjct  25   FRLGDFYEMFFEDAKKASQELEIT---LTSRDGGAAEKIPMCGVPYHSASAYIEQLIK-K  80

Query  97   QYRVEVYKNRAGNKASKEN-DWYLAYKASPGNLSQFEDILFGNNDMSASIGVVGVKMSAV  155
             Y+V + +     KA+K      +    +PG +   + I    N+  AS+          
Sbjct  81   GYKVAICEQTEDPKAAKGVVKREVVQLITPGTVMDGKGIHESENNFIASVSACSNGYGLA  140

Query  156  DGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQ  215
                  G      I+R              ++ + +  +G +E V+ G   A  + +LR 
Sbjct  141  LSDLTTGENLAVLIER------------LEDVISEIYSVGAREIVVSGSLDADTVAQLR-  187

Query  216  IIQRGGILITERKKADFSTKDIYQDLNRLLKGKKGEQMNSAVLPEMENQVAVSSLSAVIK  275
                      ER  A  S +D          G+  E +   ++  + N+    +   +  
Sbjct  188  ----------ERCGATISIED----------GETDEHVT--IIEHLNNEDITKTFLRLYT  225

Query  276  FLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKT  335
            +L+     S      +  ++  + MK+D+ + R L L + ++       SL  LL++ KT
Sbjct  226  YLKRTQKRSLDHLQPVQVYELEEAMKIDLYSKRNLELTE-TIRSKNKKGSLLWLLDETKT  284

Query  336  PQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQ  395
              G RL+ QWI +PL+  N+IEER  +VE  +     R+ L+E L   + DL RLA +  
Sbjct  285  AMGGRLLKQWIDRPLIRVNQIEERQEMVETLMSHFFEREDLRERLKEVY-DLERLAGRVA  343

Query  396  RQAANLQDCYRLYQGINQLPNVIQALEK--HEGKHQKLLLAVFVTPLTDLRSDFSKFQEM  453
                N +D  +L + + Q+P + Q +    H+   ++   A  + P  D+       +E 
Sbjct  344  FGNVNARDLIQLKESLKQVPGIKQLVASLAHDKAKER---AKRIDPCGDV---LELLEEA  397

Query  454  IETTLDMDQVENHEFLVKPSFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKL  513
            +     +   E +  L+K  ++  L E R+   + +  +           G+   + +K+
Sbjct  398  LYENPPLSVKEGN--LIKDGYNQKLDEYRDASRNGKDWIARLEQQEREYTGI---RSLKV  452

Query  514  DSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeA  573
              +  FGYY  VT     +L   + +   +   N  ++   +L        + +    E 
Sbjct  453  GFNKVFGYYIEVTKANLHLLEEGR-YERNETLTNAERYITPELKEKEALILEAENNICEL  511

Query  574  QDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRII  633
            +  +  E+      Y+  +Q L   +++LDA+  FA +S      Y +P   E  +  + 
Sbjct  512  EYELFTELREKVKQYIPRLQQLAKQMSELDALQCFATISENRH--YTKP---EFSKDEVE  566

Query  634  LKASRHACVE-VQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIG  692
            +   RH  VE V D   ++PN+     ++QM  +ITGPNM GKSTY+RQ  +I +MAQIG
Sbjct  567  VIEGRHPVVEKVMDSQEYVPNNCMMGDNRQML-LITGPNMSGKSTYMRQIALISIMAQIG  625

Query  693  CFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGR  752
            CFVP + A + I D I  R+GA D  + G STFM EMLE  + + +ATK+SLI+ DE+GR
Sbjct  626  CFVPAKKAVLPIFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIVNATKNSLILFDEIGR  685

Query  753  GTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetlt  812
            GTSTYDG  LA AI EY+   IGA  +F+TH+HELT L +++P + N+HV A     T+ 
Sbjct  686  GTSTYDGMALAQAIIEYVHDHIGAKTLFSTHYHELTVLEDKLPQLKNVHVRAEEYNGTVV  745

Query  813  MLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEEFQYIGESQGYDIMEPAAKK  872
             L+Q+K+G  D+S+GIHVA+LA  P  +I  A+     L+E ++ G      + +P  K+
Sbjct  746  FLHQIKEGAADKSYGIHVAQLAELPGDLIARAQD---ILKELEHSGNKPEVPVQKPQVKE  802


>gi|49478366|ref|YP_037830.1|  DNA mismatch repair protein [Bacillus thuringiensis serovar konkukian 
str. 97-27]
Length=890

 Score =  282 bits (722),  Expect = 3e-74
 Identities = 192/561 (34%), Positives = 307/561 (54%), Gaps = 26/561 (4%)

Query  297  SQYMKLDIAAVRALNLFQG-SVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNR  355
            +Q+MK+D+ + R L L +    ++ TGS  L  LL+K KT  G R++ QW+++PL+ K R
Sbjct  251  NQFMKIDVHSKRNLELTETLRTKEKTGS--LLWLLDKTKTAMGGRMLKQWMERPLIQKER  308

Query  356  IEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLP  415
            IEERL +VE FV D  LR+ L+E L   + DL RLA K      N +D  +L + + Q+P
Sbjct  309  IEERLEMVETFVNDYFLREDLKEKLKEVY-DLERLAGKVAFGNVNARDLLQLRRSLLQVP  367

Query  416  NVIQALEKHEGKHQKLLL--AVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPS  473
             +++A+   +  +   L+  A     LT+L       QE    ++    +      +K  
Sbjct  368  AILEAISLLDNAYAARLIQGADPCESLTELLG--RSIQENPPLSIKDGDI------IKDG  419

Query  474  FDPNLSELREIMNDLEKKMQSTLISAARDL-GLDPGKQIKLDSSAQFGYYFRVTCKEEKV  532
            ++  L + R +  +  K   + L    RD+ G+   K +K+  +  FGYY  VT      
Sbjct  420  YNDKLDQYRYVSKN-GKTWIAELEKRERDITGI---KSLKIGYNRIFGYYIEVTKANLGA  475

Query  533  LRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPM  592
            L   + +       N  +F   +L        + + +  + +  +   +      ++  +
Sbjct  476  LPEGR-YERKQTLANAERFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKL  534

Query  593  QTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVE-VQDEIAFI  651
            Q L  V+++LD + SFA VS      +V+P +  K +  I +K  RH  VE V +   ++
Sbjct  535  QHLAKVISELDVLQSFATVSEEEQ--FVKPVLTTKRE--IFIKDGRHPVVEKVLNGKLYV  590

Query  652  PNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILAR  711
            PND    ++  +F +ITGPNM GKSTY+RQ  ++ +M+QIGCFVP   A + + D I  R
Sbjct  591  PNDCIMPENMDVF-LITGPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTR  649

Query  712  VGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIA  771
            +GA D  + G STFM EMLE  + + +A++ SLI+ DE+GRGTSTYDG  LA AI E+I 
Sbjct  650  IGAADDLISGQSTFMVEMLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIH  709

Query  772  TKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVA  831
             +IGA  +F+TH+HELT L + +  + N+HV+A+     +  L++++ G  D+S+GIHVA
Sbjct  710  DQIGAKTLFSTHYHELTVLEDSLDQLKNVHVSAIEENGKVVFLHKIQDGAADKSYGIHVA  769

Query  832  ELANFPKHVIECAKQKALELE  852
            +LA  P  +I  AK+   +LE
Sbjct  770  QLAELPDSLIARAKEVLAQLE  790


>gi|52141719|ref|YP_085110.1|  DNA mismatch repair protein [Bacillus cereus E33L]
Length=894

 Score =  282 bits (722),  Expect = 3e-74
 Identities = 199/612 (32%), Positives = 325/612 (53%), Gaps = 34/612 (5%)

Query  297  SQYMKLDIAAVRALNLFQG-SVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNR  355
            +Q+MK+D+ + R L L +    ++ TGS  L  LL+K KT  G R++ QW+++PL+ K R
Sbjct  251  NQFMKIDVHSKRNLELTETLRTKEKTGS--LLWLLDKTKTAMGGRMLKQWMERPLIQKER  308

Query  356  IEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLP  415
            IEERL +VE FV D  LR+ L+E L   + DL RLA K      N +D  +L + + Q+P
Sbjct  309  IEERLEMVETFVNDYFLREDLKEKLKEVY-DLERLAGKVAFGNVNARDLLQLRRSLLQVP  367

Query  416  NVIQALEKHEGKHQKLLL--AVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPS  473
             +++A+   +  +   L+  A     LT+L       QE    ++    +      +K  
Sbjct  368  AILEAISLLDNAYAARLIQGADPCESLTELLG--RSIQENPPLSIKDGDI------IKDG  419

Query  474  FDPNLSELREIMNDLEKKMQSTLISAARDL-GLDPGKQIKLDSSAQFGYYFRVTCKEEKV  532
            ++  L + R +  +  K   + L    RD+ G+   K +K+  +  FGYY  VT      
Sbjct  420  YNDKLDQYRYVSKN-GKTWIAELEKRERDITGI---KSLKIGYNRIFGYYIEVTKANLGA  475

Query  533  LRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPM  592
            L   + +       N  +F   +L        + + +  + +  +   +      ++  +
Sbjct  476  LPEGR-YERKQTLANAERFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKL  534

Query  593  QTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVE-VQDEIAFI  651
            Q L  V+++LD + SFA VS      +V+P +  K +  I +K  RH  VE V +   ++
Sbjct  535  QHLAKVISELDVLQSFATVSEEEQ--FVKPVLTTKRE--IFIKDGRHPVVEKVLNGKLYV  590

Query  652  PNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILAR  711
            PND    +   +F +ITGPNM GKSTY+RQ  ++ +M+QIGCFVP   A + + D I  R
Sbjct  591  PNDCIMPEKMDVF-LITGPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTR  649

Query  712  VGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIA  771
            +GA D  + G STFM EMLE  + + +A++ SLI+ DE+GRGTSTYDG  LA AI E+I 
Sbjct  650  IGAADDLISGQSTFMVEMLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIH  709

Query  772  TKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVA  831
             +IGA  +F+TH+HELT L + +  + N+HV+A+     +  L++++ G  D+S+GIHVA
Sbjct  710  DQIGAKTLFSTHYHELTVLEDSLDQLKNVHVSAIEENGKVVFLHKIQDGAADKSYGIHVA  769

Query  832  ELANFPKHVIECAKQKALELEEFQYIGESQGYDIMEPAAKKCYLEREQGEKIIQEFLSKV  891
            +LA  P  +I  AK+   +LE  +        +I+ P   +   + ++ E I +  + K 
Sbjct  770  QLAELPDSLIARAKEVLAQLEGQE--------EIIIPKRVEVKAQEQEQEVIPEPIVVKE  821

Query  892  KQMPFTEMSEEN  903
            + +   E   +N
Sbjct  822  EPVEIEETKVDN  833


>gi|47529195|ref|YP_020544.1|  DNA mismatch repair protein [Bacillus anthracis str. 'Ames Ancestor']
 gi|49186619|ref|YP_029871.1|  DNA mismatch repair protein [Bacillus anthracis str. Sterne]
 gi|30263775|ref|NP_846152.1|  DNA mismatch repair protein [Bacillus anthracis str. Ames]
Length=892

 Score =  282 bits (722),  Expect = 3e-74
 Identities = 192/561 (34%), Positives = 307/561 (54%), Gaps = 26/561 (4%)

Query  297  SQYMKLDIAAVRALNLFQG-SVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNR  355
            +Q+MK+D+ + R L L +    ++ TGS  L  LL+K KT  G R++ QW+++PL+ K R
Sbjct  251  NQFMKIDVHSKRNLELTETLRTKEKTGS--LLWLLDKTKTAMGGRMLKQWMERPLIQKER  308

Query  356  IEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLP  415
            IEERL +VE FV D  LR+ L+E L   + DL RLA K      N +D  +L + + Q+P
Sbjct  309  IEERLEMVETFVNDYFLREDLKEKLKEVY-DLERLAGKVAFGNVNARDLLQLRRSLLQVP  367

Query  416  NVIQALEKHEGKHQKLLL--AVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPS  473
             +++A+   +  +   L+  A     LT+L       QE    ++    +      +K  
Sbjct  368  AILEAISLLDNAYAARLIQGADPCESLTELLG--RSIQENPPLSIKDGDI------IKDG  419

Query  474  FDPNLSELREIMNDLEKKMQSTLISAARDL-GLDPGKQIKLDSSAQFGYYFRVTCKEEKV  532
            ++  L + R +  +  K   + L    RD+ G+   K +K+  +  FGYY  VT      
Sbjct  420  YNDKLDQYRYVSKN-GKTWIAELEKRERDITGI---KSLKIGYNRIFGYYIEVTKANLGA  475

Query  533  LRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPM  592
            L   + +       N  +F   +L        + + +  + +  +   +      ++  +
Sbjct  476  LPEGR-YERKQTLANAERFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKL  534

Query  593  QTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVE-VQDEIAFI  651
            Q L  V+++LD + SFA VS      +V+P +  K +  I +K  RH  VE V +   ++
Sbjct  535  QHLAKVISELDVLQSFATVSEEEQ--FVKPVLTTKRE--IFIKDGRHPVVEKVLNGKLYV  590

Query  652  PNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILAR  711
            PND    ++  +F +ITGPNM GKSTY+RQ  ++ +M+QIGCFVP   A + + D I  R
Sbjct  591  PNDCIMPENMDVF-LITGPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTR  649

Query  712  VGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIA  771
            +GA D  + G STFM EMLE  + + +A++ SLI+ DE+GRGTSTYDG  LA AI E+I 
Sbjct  650  IGAADDLISGQSTFMVEMLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIH  709

Query  772  TKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVA  831
             +IGA  +F+TH+HELT L + +  + N+HV+A+     +  L++++ G  D+S+GIHVA
Sbjct  710  DQIGAKTLFSTHYHELTVLEDSLDQLKNVHVSAIEENGKVVFLHKIQDGAADKSYGIHVA  769

Query  832  ELANFPKHVIECAKQKALELE  852
            +LA  P  +I  AK+   +LE
Sbjct  770  QLAELPDSLIARAKEVLAQLE  790


>gi|65321095|ref|ZP_00394054.1|  COG0249: Mismatch repair ATPase (MutS family) [Bacillus anthracis 
str. A2012]
Length=886

 Score =  282 bits (722),  Expect = 3e-74
 Identities = 192/561 (34%), Positives = 307/561 (54%), Gaps = 26/561 (4%)

Query  297  SQYMKLDIAAVRALNLFQG-SVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNR  355
            +Q+MK+D+ + R L L +    ++ TGS  L  LL+K KT  G R++ QW+++PL+ K R
Sbjct  245  NQFMKIDVHSKRNLELTETLRTKEKTGS--LLWLLDKTKTAMGGRMLKQWMERPLIQKER  302

Query  356  IEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLP  415
            IEERL +VE FV D  LR+ L+E L   + DL RLA K      N +D  +L + + Q+P
Sbjct  303  IEERLEMVETFVNDYFLREDLKEKLKEVY-DLERLAGKVAFGNVNARDLLQLRRSLLQVP  361

Query  416  NVIQALEKHEGKHQKLLL--AVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPS  473
             +++A+   +  +   L+  A     LT+L       QE    ++    +      +K  
Sbjct  362  AILEAISLLDNAYAARLIQGADPCESLTELLG--RSIQENPPLSIKDGDI------IKDG  413

Query  474  FDPNLSELREIMNDLEKKMQSTLISAARDL-GLDPGKQIKLDSSAQFGYYFRVTCKEEKV  532
            ++  L + R +  +  K   + L    RD+ G+   K +K+  +  FGYY  VT      
Sbjct  414  YNDKLDQYRYVSKN-GKTWIAELEKRERDITGI---KSLKIGYNRIFGYYIEVTKANLGA  469

Query  533  LRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPM  592
            L   + +       N  +F   +L        + + +  + +  +   +      ++  +
Sbjct  470  LPEGR-YERKQTLANAERFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKL  528

Query  593  QTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVE-VQDEIAFI  651
            Q L  V+++LD + SFA VS      +V+P +  K +  I +K  RH  VE V +   ++
Sbjct  529  QHLAKVISELDVLQSFATVSEEEQ--FVKPVLTTKRE--IFIKDGRHPVVEKVLNGKLYV  584

Query  652  PNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILAR  711
            PND    ++  +F +ITGPNM GKSTY+RQ  ++ +M+QIGCFVP   A + + D I  R
Sbjct  585  PNDCIMPENMDVF-LITGPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTR  643

Query  712  VGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIA  771
            +GA D  + G STFM EMLE  + + +A++ SLI+ DE+GRGTSTYDG  LA AI E+I 
Sbjct  644  IGAADDLISGQSTFMVEMLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIH  703

Query  772  TKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVA  831
             +IGA  +F+TH+HELT L + +  + N+HV+A+     +  L++++ G  D+S+GIHVA
Sbjct  704  DQIGAKTLFSTHYHELTVLEDSLDQLKNVHVSAIEENGKVVFLHKIQDGAADKSYGIHVA  763

Query  832  ELANFPKHVIECAKQKALELE  852
            +LA  P  +I  AK+   +LE
Sbjct  764  QLAELPDSLIARAKEVLAQLE  784


>gi|47568274|ref|ZP_00238977.1|  DNA mismatch repair protein MutS [Bacillus cereus G9241]
Length=892

 Score =  282 bits (722),  Expect = 3e-74
 Identities = 201/612 (32%), Positives = 326/612 (53%), Gaps = 36/612 (5%)

Query  297  SQYMKLDIAAVRALNLFQG-SVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNR  355
            +Q+MK+D+ + R L L +    ++ TGS  L  LL+K KT  G R++ QW+++PL+ K R
Sbjct  251  NQFMKIDVHSKRNLELTETLRTKEKTGS--LLWLLDKTKTAMGGRMLKQWMERPLIQKER  308

Query  356  IEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLP  415
            IEERL +VE FV D  LR+ L+E L   + DL RLA K      N +D  +L + + Q+P
Sbjct  309  IEERLEMVETFVNDYFLREDLKEKLKEVY-DLERLAGKVAFGNVNARDLLQLRRSLLQVP  367

Query  416  NVIQALEKHEGKHQKLLL--AVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPS  473
             +++A+   +  +   L+  A     LT+L       QE    ++    +      +K  
Sbjct  368  AILEAISLLDNAYAARLIQGADPCESLTELLG--RSIQENPPLSIKDGDI------IKDG  419

Query  474  FDPNLSELREIMNDLEKKMQSTLISAARDL-GLDPGKQIKLDSSAQFGYYFRVTCKEEKV  532
            ++  L + R +  +  K   + L    RD+ G+   K +K+  +  FGYY  VT      
Sbjct  420  YNDKLDQYRYVSKN-GKTWIAELEKRERDITGI---KSLKIGYNRIFGYYIEVTKANLGA  475

Query  533  LRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPM  592
            L   + +       N  +F   +L        + + +  + +  +   +      ++  +
Sbjct  476  LPEGR-YERKQTLANAERFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKL  534

Query  593  QTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVE-VQDEIAFI  651
            Q L  V+++LD + SFA VS      +V+P +  K +  I +K  RH  VE V +   ++
Sbjct  535  QHLAKVISELDVLQSFATVSEEEQ--FVKPVLTTKRE--IFIKDGRHPVVEKVLNGKLYV  590

Query  652  PNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILAR  711
            PND    ++  +F +ITGPNM GKSTY+RQ  ++ +M+QIGCFVP   A + + D I  R
Sbjct  591  PNDCIMPENMDVF-LITGPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTR  649

Query  712  VGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIA  771
            +GA D  + G STFM EMLE  + + +A++ SLI+ DE+GRGTSTYDG  LA AI E+I 
Sbjct  650  IGAADDLISGQSTFMVEMLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIH  709

Query  772  TKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVA  831
             +IGA  +F+TH+HELT L   +  + N+HV+A+     +  L++++ G  D+S+GIHVA
Sbjct  710  DQIGAKTLFSTHYHELTVLEESLDQLKNVHVSAIEENGKVVFLHKIQDGAADKSYGIHVA  769

Query  832  ELANFPKHVIECAKQKALELEEFQYIGESQGYDIMEPAAKKCYLEREQGEKIIQEFLSKV  891
            +LA  P  +I  AK+   +LE  +        +I+ P  K+  ++ ++ E I +  + K 
Sbjct  770  QLAELPDSLIARAKEVLAQLEGQE--------EIIIP--KRVEVKAQEQEVISEPLVVKE  819

Query  892  KQMPFTEMSEEN  903
              +   E   EN
Sbjct  820  DPVEIEETKVEN  831


>gi|91205203|ref|YP_537558.1|  DNA mismatch repair protein MutS [Rickettsia bellii RML369-C]
Length=888

 Score =  282 bits (721),  Expect = 4e-74
 Identities = 243/901 (26%), Positives = 430/901 (47%), Gaps = 69/901 (7%)

Query  36   LFDRGDFYTAHGEDALLAAREVFKTQGV-IKYMGPAGAKNLQSVVLSKMNFESFVKDLLL  94
            LF  GDFY    EDA+LA+  +    G+ +   G  G + +    +     E+++  L+ 
Sbjct  35   LFRMGDFYEMFYEDAVLASGVL----GIALTKRGKNGDEEVPMCGVPYHALENYLTKLI-  89

Query  95   VRQYRV---------EVYKNRAGNKASKENDWYLAYKASPGNLSQFEDILFGNNDMSASI  145
               Y+V         E  KNR G KA    +  +    +PG + +   I     +  AS+
Sbjct  90   EENYKVAICDQLETPEEAKNRGGYKAVVNRN--VTRIITPGTVIEENLITTVEPNYLASL  147

Query  146  GVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKECVLPGGE  205
             V   K +A        + Y D     + +   P+ +  + L  L     P+E +L    
Sbjct  148  VVPKNKDTAA-------LCYADLSTSTIFVVNVPELEILNELARLK----PREILLSEHL  196

Query  206  TAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLKGKK----GEQMNSAVLPEM  261
             + D+     I ++    IT +  + F+     + +    K K     GE  NS +    
Sbjct  197  RSSDLAS--NISKQLNFRITYQVDSFFAVNKCEKIILDFYKMKDIKGVGEISNSQIC---  251

Query  262  ENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLFQGSVEDTT  321
                   ++ +++++L L   ++     +    DF  YM +D +  R L +   S     
Sbjct  252  -------AIGSILEYLTLTQKENIPNLPKPKIIDFHSYMTIDFSTRRNLEIVTNSCGGNK  304

Query  322  GSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLL  381
            GS  L + LN   T QG RL+  ++  PL D ++I +RLN+ E F  + ++   ++E LL
Sbjct  305  GS--LLSTLNHTVTKQGGRLLYNFLSSPLTDTHKINQRLNITEFFHSNLDITAKVRE-LL  361

Query  382  RRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVFVTPLT  441
            ++  D+ R   +      + +D   +   +    ++ +    + G      +   V PL 
Sbjct  362  KKTSDIERCLTRITMNRGSGRDLLSIKYTLETANSIKEIFFDNYGFELPSFIEKIVKPL-  420

Query  442  DLRSDFSKFQEMIETTLDMDQVENHEF--LVKPSFDPNLSELREIMNDLEKKMQSTLISA  499
             +R+D  +   +IE ++  D   N     ++K S+ P + +L +++N+ +  ++      
Sbjct  421  -IRND--ELYNLIEESICEDAPNNLNDGGVIKHSYHPKVLQLHDLINNGKLHIEKLKDQY  477

Query  500  ARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSL  559
             ++ G+D    +K+  +   G +  +T K    + N+  F       N V++T ++L  L
Sbjct  478  KKETGID---SLKISHNNVIGLFIDITAKNANKI-NDPKFIHRQTTVNSVRYTTAELQKL  533

Query  560  neeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPY  619
              +    KT     +  + ++I    +   + ++ L   L+ +D   +FA++++     Y
Sbjct  534  ESDLVNAKTLVVSLEKELYEDICKRVTKQSDYLRILASSLSGIDVFCNFAYIASEND--Y  591

Query  620  VRPAILEKGQGRIILKASRHACVEV---QDEIAFIPNDVYFEKDKQMFHIITGPNMGGKS  676
             RP   +     I+    RH  VE    ++  +F+ ND +  + ++++ +ITGPNM GKS
Sbjct  592  TRPEFTDDLSFDIV--KGRHPVVEEALNKERKSFVHNDCHLSEAERIW-LITGPNMAGKS  648

Query  677  TYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASIL  736
            T++RQ  +I ++AQIG FVP +SA + +VD I +R+GA D  +KG STFMAEMLET++IL
Sbjct  649  TFLRQNAIIAIIAQIGSFVPAKSARIGMVDKIFSRIGAADDLIKGQSTFMAEMLETSAIL  708

Query  737  RSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPT  796
              +TK+SLII+DE+GRGTSTYDG  +AW++ EYI  K+   C+FATH+HELT + N +P 
Sbjct  709  AQSTKNSLIILDEVGRGTSTYDGVSIAWSVLEYIHDKLKCRCLFATHYHELTIMDNFLPA  768

Query  797  VNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEEFQY  856
            + N  +    + + +  L+ +  G  D+S+GIHVA LA  P  VI  A+Q  L   +F+ 
Sbjct  769  MQNYTIAIEESGKDILFLHNIIAGAADRSYGIHVAALAGLPASVINRAEQILL---KFEK  825

Query  857  IGESQGYDIMEPAAKKCYLEREQGEKIIQEFL-SKVKQMPFTEMSEENITIKLKQLKAEV  915
                +G +I+   +    L   +  K+    L  K K +   ++S +     L QLK+  
Sbjct  826  NAAGKGKNILSTESNNLSLFAIESPKLQNSKLEEKFKTIDPDKLSPKEALELLYQLKSNF  885

Query  916  I  916
            I
Sbjct  886  I  886


>gi|42782853|ref|NP_980100.1|  DNA mismatch repair protein [Bacillus cereus ATCC 10987]
Length=892

 Score =  282 bits (721),  Expect = 4e-74
 Identities = 192/561 (34%), Positives = 306/561 (54%), Gaps = 26/561 (4%)

Query  297  SQYMKLDIAAVRALNLFQG-SVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNR  355
            +Q+MK+D+ + R L L +    ++ TGS  L  LL+K KT  G R++ QW+++PL+ K R
Sbjct  251  NQFMKIDVHSKRNLELTETLRTKEKTGS--LLWLLDKTKTAMGGRMLKQWMERPLIQKER  308

Query  356  IEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLP  415
            IEERL +VE FV D  LR+ L+E L   + DL RLA K      N +D  +L + + Q+P
Sbjct  309  IEERLEMVETFVNDYFLREDLKEKLKEVY-DLERLAGKVAFGNVNARDLLQLRRSLLQVP  367

Query  416  NVIQALEKHEGKHQKLLL--AVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPS  473
             +++A+   +  +   L+  A     LT+L       QE    ++    +      +K  
Sbjct  368  AILEAISLLDNAYAARLIQGADPCESLTELLG--RSIQENPPLSIKDGDI------IKDG  419

Query  474  FDPNLSELREIMNDLEKKMQSTLISAARDL-GLDPGKQIKLDSSAQFGYYFRVTCKEEKV  532
            ++  L + R +  +  K   + L    RD+ G+   K +K+  +  FGYY  VT      
Sbjct  420  YNDKLDQYRYVSKN-GKTWIAELEKRERDITGI---KSLKIGYNRIFGYYIEVTKANLGA  475

Query  533  LRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPM  592
            L   + +       N  +F   +L        + + +  + +  +   +      ++  +
Sbjct  476  LPEGR-YERKQTLANAERFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKL  534

Query  593  QTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVE-VQDEIAFI  651
            Q L  V+++LD + SFA VS      +V+P +  K +  I +K  RH  VE V +   ++
Sbjct  535  QHLAKVISELDVLQSFATVSEEEQ--FVKPVLTTKRE--IFIKDGRHPVVEKVLNGKLYV  590

Query  652  PNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILAR  711
            PND    ++  +F +ITGPNM GKSTY+RQ  ++ +M+QIGCFVP   A + + D I  R
Sbjct  591  PNDCIMPENMDVF-LITGPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTR  649

Query  712  VGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIA  771
            +GA D  + G STFM EMLE  + + +A++ SLI+ DE+GRGTSTYDG  LA AI E+I 
Sbjct  650  IGAADDLISGQSTFMVEMLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIH  709

Query  772  TKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVA  831
             +IGA  +F+TH+HELT L   +  + N+HV+A+     +  L++++ G  D+S+GIHVA
Sbjct  710  DQIGAKTLFSTHYHELTVLEESLDQLKNVHVSAIEENGKVVFLHKIQDGAADKSYGIHVA  769

Query  832  ELANFPKHVIECAKQKALELE  852
            +LA  P  +I  AK+   +LE
Sbjct  770  QLAELPDSLIARAKEVLAQLE  790


>gi|53731975|ref|ZP_00153447.2|  COG0249: Mismatch repair ATPase (MutS family) [Rickettsia rickettsii]
Length=886

 Score =  282 bits (721),  Expect = 4e-74
 Identities = 229/837 (27%), Positives = 412/837 (49%), Gaps = 65/837 (7%)

Query  36   LFDRGDFYTAHGEDALLAAREVFKTQGV-IKYMGPAGAKNLQSVVLSKMNFESFVKDLLL  94
            LF  GDFY    EDA+LA+  +    G+ +   G  G + +    +     E+++  L+ 
Sbjct  35   LFRMGDFYEMFYEDAILASNVL----GIALTKRGKNGEEEIAMCGVPYHALENYLTKLI-  89

Query  95   VRQYRV---------EVYKNRAGNKASKENDWYLAYKASPGNLSQFEDILFGNNDMSASI  145
               Y+V         E  KNR G KA    D  +    +PG + +   I     +  AS+
Sbjct  90   EENYKVAICDQLETPEEAKNRGGYKAVVTRD--VTRIITPGTIIEENLIASAEPNYLASL  147

Query  146  GVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKECVLPGGE  205
             +   K +A        + YVD    ++ +   P+ +  + L  L     P+E +L    
Sbjct  148  VIPKNKETA-------SLCYVDLSTSEIVVVNVPETEILNELARLK----PREILLSENL  196

Query  206  TAGDMGKLRQIIQRGGILITERKKADFST---KDIYQDLNRLLKGKKGEQMNSAVLPEME  262
             + ++     I ++    IT +  + F+    K I  D  ++   K   +++S+      
Sbjct  197  RSSNLAD--SIFKQLNFRITYQVDSFFAINKCKKIILDFYKMKDIKGIGEISSS------  248

Query  263  NQVAVSSLSAVIKFLELLSDDSNFGQFELTTF-DFSQYMKLDIAAVRALNLFQGSVEDTT  321
                + ++ +V+++L L +   N     +    +F  YM +D +  R L +   S  D+ 
Sbjct  249  ---QICAIGSVLEYLSL-TQKQNIPHLPIPRIINFHSYMTIDFSTRRNLEIVTNSQGDSQ  304

Query  322  GSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLL  381
            GS  L + LN   T QG RL+  ++  PL +  +I  RLN+ E F  + E+ + ++E LL
Sbjct  305  GS--LLSTLNHTVTKQGGRLLYNFLSSPLTNIAKINHRLNITEFFYSNLEIVKKIRE-LL  361

Query  382  RRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVFVTPLT  441
            ++  D+ R   +     ++ +D   +   +     + +      G +    +   + PL 
Sbjct  362  KKTSDIERCLTRITMNRSSGRDLLSIKYTLETATIIKEVFFDAYGFNLPDFIEKIIKPL-  420

Query  442  DLRSDFSKFQEMIETTLDMDQVENHEF--LVKPSFDPNLSELREIMNDLEKKMQSTLISA  499
               S  ++   +I+ T+  D   N     ++K  + P +++L +++N+ +  ++      
Sbjct  421  ---SGDAELYNLIDETIREDAPNNLNDGGIIKHEYHPKVAQLHDLINNGKLYIEKLKDQY  477

Query  500  ARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSL  559
             ++ G+D    +K+  +   G +  +T K    + + K F       N V++T ++L  L
Sbjct  478  RKETGID---SLKISHNNVIGLFIDITAKNVNKILDPK-FIHRQTTVNHVRYTTAELQKL  533

Query  560  neeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPY  619
              E    KT     +  +  +I +        ++ L   L+ LD   +FA++++     Y
Sbjct  534  ESELVNAKTLVISLEKELYADICSQVIEKASYLRMLASSLSGLDVFCNFAYIAD--EYDY  591

Query  620  VRPAILEKGQGRIILKASRHACVEV---QDEIAFIPNDVYFEKDKQMFHIITGPNMGGKS  676
            V+P   +     I+    RH  VE    ++  +F+ ND +  + ++++ +ITGPNM GKS
Sbjct  592  VKPEFTDDLSFDIV--KGRHPVVEKALQRESKSFVYNDCHLSELERIW-LITGPNMAGKS  648

Query  677  TYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASIL  736
            T++RQ  +I ++AQIG FVP +SA++ +VD I +R+GA D  +KG STFMAEMLET++IL
Sbjct  649  TFLRQNAIIAIIAQIGSFVPAKSAKIGVVDKIFSRIGAADDLIKGQSTFMAEMLETSAIL  708

Query  737  RSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPT  796
              +TK+SLII+DE+GRGTSTYDG  +AW++ EYI  K+   C+FATH+HELT ++N +P 
Sbjct  709  AQSTKNSLIILDEVGRGTSTYDGVSIAWSVLEYIHDKLKCRCLFATHYHELTVMSNFLPA  768

Query  797  VNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEE  853
            + N  +    + + +  L+ +  G  D+S+G+HVA LA  P+ VI  A+Q  L+ E+
Sbjct  769  LQNYTIAIEESGKDILFLHNIISGAADRSYGLHVAALAGLPESVINRAEQILLKFEK  825


>gi|91773655|ref|YP_566347.1|  DNA mismatch repair protein MutS [Methanococcoides burtonii DSM 
6242]
Length=887

 Score =  281 bits (719),  Expect = 7e-74
 Identities = 226/835 (27%), Positives = 385/835 (46%), Gaps = 53/835 (6%)

Query  37   FDRGDFYTAHGEDALLAAREVFKTQGVIKYMGPAGAKNLQSVVLSKMNFESFVKD----L  92
            F  GDFY + GEDA + A+E+  T            K+++   +          D     
Sbjct  25   FRMGDFYESFGEDAKIIAKELEITL-------TTRGKDIEGEKMPLAGIPYHALDNYLPR  77

Query  93   LLVRQYRVEVYKNRAGNKASKEN-DWYLAYKASPG---NLSQFEDILFGNNDMSASIGVV  148
            L+ + Y+V + +     K +K      +    +PG   + S F D    NN +       
Sbjct  78   LIKKGYKVAICEQLEDPKKAKGIIKRGVVRVVTPGTAIDTSMFTDP--SNNYL-------  128

Query  149  GVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKECVLPGGETAG  208
               MS   G    GV ++D    +    +F D   +  + +   ++ P EC++    T  
Sbjct  129  ---MSISGGDGDYGVSFLDVSTGEFLTTQFADKSPYDRIASEAARMRPSECII--SRTMF  183

Query  209  DMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLKGKKGEQMNSAVLPEMENQVAVS  268
               +L + ++   +L+   K   F      + L R       E M  A LP      A S
Sbjct  184  SDERLVERLKELNVLVQGFKDEAFDVDSSRKLLERHFNVSTLEGMGCAGLP-----YATS  238

Query  269  SLSAVIKFLELLSDDSNFGQF-ELTTFDFSQYMKLDIAAVRALNLFQGSVEDTTGSQSLA  327
            S  A + +  L +     G   EL+T+  S++M LD   +R L + + +V       S+ 
Sbjct  239  SAGAALDYA-LTTQMRELGHVSELSTYSDSEFMMLDSITLRNLEIVK-NVRGEGNDTSIL  296

Query  328  ALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDL  387
             +L+   TP G RL+ +W+ +PL++ + I+ RL+ +E    D  LR  ++  L     D+
Sbjct  297  KVLDDTNTPMGGRLLQKWLLKPLINVDSIDHRLDALECLANDTMLRFDVRSHL-SFVKDI  355

Query  388  NRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVFVTPLTDLRSDF  447
             RL  +     +N +D   L + +  +P +++++    G    + +   +     L +  
Sbjct  356  ERLIGRVVYGNSNARDLIALKRSLGSVPQIVESMGDDPGCEMLINIRDGLLGFEQLENIV  415

Query  448  SKFQEMIETTLDMDQVENHEF-LVKPSFDPNLSELREIMNDLEKKMQSTLISAARDLGLD  506
                + I   +D   V   E  +++  ++  L EL+ +    +  + S         G+ 
Sbjct  416  KLIDDAI---VDEPPVSVREGGMIRSGYNEKLDELKGMSTGGKTWIASFQQKERDRTGI-  471

Query  507  PGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytkn  566
              K +K+  +  FGYY  +T  +  + +   ++      +N  +F   +L    +     
Sbjct  472  --KSLKVGYNRVFGYYIEIT--KSNIAQIPDDYIRKQTMRNAERFYTPELKEWEDVILSA  527

Query  567  kteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILE  626
              +    ++ +  EI +  + +   +Q +  ++ QLD   S A V+      +VRP I  
Sbjct  528  DEKITALENELFTEITSRIASHASDLQRIAVLIGQLDCTASLAEVAVNNN--FVRPNITS  585

Query  627  KGQGRIILKASRHACVEVQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIV  686
                +I+++  RH  VE      F+PND   +   + F +ITGPNM GKSTY+RQ  +IV
Sbjct  586  --DCKILIREGRHPVVEKTVRGGFVPNDTEMDCVDEQFLLITGPNMAGKSTYMRQVSLIV  643

Query  687  LMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLII  746
            +MAQ G FVP   A + IVD +  RVGA D    G STFM EM+E A+IL +AT  SL++
Sbjct  644  IMAQAGSFVPASHASIGIVDRVFTRVGAFDDLASGQSTFMVEMVELANILNNATPKSLVL  703

Query  747  IDELGRGTSTYDGFGLAWAISEYIATK--IGAFCMFATHFHELTALANQIPTVNNLHVta  804
            +DE+GRGTSTYDG+ +A A+ EYI  K  +G   +FATH+H+LT +++ +  V N H+  
Sbjct  704  LDEIGRGTSTYDGYSIAKAVVEYIHNKGRVGVRSLFATHYHQLTNISSSLKRVKNYHIAV  763

Query  805  ltteetltMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEEFQYIGE  859
                + L  L ++  G  D+S+GIHVA LA  P  V + AK+   ++E+   I +
Sbjct  764  KEDGDDLVFLRKIVPGATDKSYGIHVARLAGVPHKVTQRAKEVLQDIEDESVISK  818


>gi|70994396|ref|XP_751995.1|  DNA mismatch repair protein Msh6 [Aspergillus fumigatus Af293]
Length=1213

 Score =  281 bits (719),  Expect = 7e-74
 Identities = 244/894 (27%), Positives = 416/894 (46%), Gaps = 103/894 (11%)

Query  19    FVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMGPAGAKNLQSV  78
             F + +  + +K   T+  F +G FY  +  DA +   ++F  +   +        N++ V
Sbjct  321   FEKQYWEIKQKFWDTIVFFKKGKFYELYENDATIG-HQLFDLKLTDRV-------NMRMV  372

Query  79    VLSKMNFESFVKDLLLVRQYRV-----------EVYKNRAGNKASKENDWYLAYKAS---  124
              + +M+ + +    +  + +++           +  + R G KA  + D  +  + S   
Sbjct  373   GVPEMSLDHWANQFV-AKGFKIARVDQSESALGKEMRERDGKKAGGKEDKIIKRELSCVL  431

Query  125   -PGNLSQFEDILFGNNDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQ  183
               G L +   +    +DMS     V +K + VD +   G+ +VD+   +  L EF D+  
Sbjct  432   TAGTLVEGSML---QDDMSTYC--VAIKEAIVDDRPAFGLAFVDTATGQFSLSEFVDDVD  486

Query  184   FSNLEALLIQIGPKECVLPGGETAGDMGKLRQIIQR--GGILITERKK-------ADFST  234
              +  E  + Q  P+E +L   E +    K  +I++   G   I    K       AD + 
Sbjct  487   MTKFETFVAQTRPQELLL---EKSTISQKALRILKNNTGPTTIWNHLKPGKEFWEADITV  543

Query  235   KDIYQDLNRLLKGKKGEQMNS---AVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFEL  291
             K++  D +     +  + + +    +    + ++ +S+  A++++L +L  D +     +
Sbjct  544   KEL--DASEYFVSQDDDNLQAWPETLREARDKEMVMSAFGALVQYLRVLKLDRDL----I  597

Query  292   TTFDFSQY--------MKLDIAAVRALNLFQGSVEDTTGSQ-SLAALLNKCKTPQGQRLV  342
             T  +FS Y        + LD   +  + +F  S +   GS+ +L  LLN+C TP G+R+ 
Sbjct  598   TIGNFSWYDPIRKASSLVLDGQTLINMEIFANSFDG--GSEGTLFQLLNRCITPFGKRMF  655

Query  343   NQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQ  402
              QW+  PLMD  +I  RL+ V+A   D+ +R      L +  PDL RL  +        Q
Sbjct  656   KQWVCHPLMDAKKINARLDAVDALNADSSVRDQFSSQLTK-MPDLERLISRIHAANCKAQ  714

Query  403   DCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQ  462
             D  R+ +G  Q+   I  L K  G   + ++   ++ + DL    S   E  +T  D  +
Sbjct  715   DFVRVLEGFEQIEYTITLL-KDNGSSSEGVIGQLISGMPDL----SSLLEYWKTAFDRTK  769

Query  463   VENHEFLV-KPSFDPNLSELREIMNDLEKKMQSTLISAARDLGL------DPGKQIKLDS  515
              + +  LV KP  + +    +E +  L + + + L    R+LG       D GK+I    
Sbjct  770   AKENGILVPKPGVEEDFDTSQERIEQLHRDLDNLLKRQRRELGSTAICYRDNGKEI----  825

Query  516   SAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQD  575
                  Y   V  K + +    KN+  +   K   ++   +L SL  +  + +        
Sbjct  826   -----YQLEVPIKVKNI---PKNWDQMSATKQVKRYYFPELRSLIRKLQEAQE----THS  873

Query  576   AIVKEIVN-----ISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQG  630
              IVKE+           Y   +  +  +++QLD ++S A  S+    P  RP  +E  + 
Sbjct  874   QIVKEVAGRFYARFDENYTTWLAAVR-IISQLDCLISLAKASSSLGHPSCRPVFVEDERS  932

Query  631   RIILKASRHACV--EVQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLM  688
              +  +  RH C+   V+D   FIPNDV    +    +++TG N  GKST +R T + V+M
Sbjct  933   VLEFEELRHPCLLSSVED---FIPNDVRLGGEVPNINLLTGANAAGKSTVLRMTCIAVIM  989

Query  689   AQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIID  748
             AQIGC++PC SA ++ VD I++R+GA D+     STF  E+ ET  IL  AT  SL+I+D
Sbjct  990   AQIGCYLPCRSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILD  1049

Query  749   ELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIP--TVNNLHVtalt  806
             ELGRGTS+YDG  +A A+  ++AT IGA   FATH+H L A  +  P  T   + +    
Sbjct  1050  ELGRGTSSYDGVAVAQAVLHHVATHIGAMGFFATHYHSLAAEFDGHPEITPKRMKIHVDD  1109

Query  807   teetltMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEEFQYIGES  860
              E  +T LY+++ GV + SFG+H A +   P  VIE A+  A + E    + ES
Sbjct  1110  EERRITFLYKLEDGVAEGSFGMHCASMCGIPNKVIERAEVAAKQWEHTSRLKES  1163


>gi|70726618|ref|YP_253532.1|  DNA mismatch repair protein [Staphylococcus haemolyticus JCSC1435]
Length=883

 Score =  281 bits (718),  Expect = 9e-74
 Identities = 190/572 (33%), Positives = 295/572 (51%), Gaps = 21/572 (3%)

Query  293  TFDFSQYMKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMD  352
            T+    +MK+D  A R L L + S+   +   +L  L+++ KTP G R + QWI +PL++
Sbjct  241  TYAAVDFMKMDYYAKRNLELTE-SIRLKSKKGTLLWLMDETKTPMGARRLKQWIDRPLIN  299

Query  353  KNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGIN  412
            K RIEERL++VE+F+     R TL+   L +  D+ RL  +      N +D  +L   I+
Sbjct  300  KERIEERLSIVESFMNHFIERDTLR-GYLNQVYDIERLVGRVSYGNVNARDLIQLKHSIS  358

Query  413  QLPNVIQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEF-LVK  471
            ++PN+   LE           ++   PL DL       Q + ++ ++   +   +  L K
Sbjct  359  EIPNIKSLLESMNDVASNQFSSL--EPLEDL------LQVLEDSLIEEPPISIKDGGLFK  410

Query  472  PSFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEK  531
              F   L E  E   + +  +           G+   K +K+  +  FGY+  +T    +
Sbjct  411  QGFSKQLDEYLEASKNGKDWLAQLQAKERERTGI---KSLKISFNKVFGYFIEITRANLQ  467

Query  532  VLRNNK-NFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVE  590
                +K  +       N  +F   +L    +     + +  + +  +   +      Y E
Sbjct  468  GFEPSKFGYHRKQTLSNAERFITDELKEKEDIILGAEDKAVDLEYQLFVRLREHIKTYTE  527

Query  591  PMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVE-VQDEIA  649
             +Q    ++++LD + SFA ++      YV+P   +     + L+ SRH  VE V D   
Sbjct  528  RLQKQAKIISELDCLQSFAEIAQ--KYNYVKPEFSDNKT--LSLENSRHPVVERVMDYND  583

Query  650  FIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCIL  709
            ++PND   +KD    ++ITGPNM GKSTY+RQ  +I +MAQ+G +VPC  AE+ I D I 
Sbjct  584  YVPNDCKLDKDN-FIYLITGPNMSGKSTYMRQVAIISIMAQMGAYVPCNKAELPIFDQIF  642

Query  710  ARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEY  769
             R+GA D  + G STFM EMLE    L  AT+DSLII DE+GRGTSTYDG  LA A+ EY
Sbjct  643  TRIGAADDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDEIGRGTSTYDGLALAQAMIEY  702

Query  770  IATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIH  829
            +A    A  +F+TH+HELT L  ++P++ N+HV A   +  L  L++VK G  D S+GI 
Sbjct  703  VAQTSHAKTLFSTHYHELTTLDQELPSLKNVHVAADEYQGELIFLHKVKDGAVDDSYGIQ  762

Query  830  VAELANFPKHVIECAKQKALELEEFQYIGESQ  861
            VA+LAN P  VI  A+      E+ Q   +++
Sbjct  763  VAKLANLPDEVINRAQVILDAFEQSQNTSDNE  794


>gi|89208992|ref|ZP_01187464.1|  MutS 1 protein [Bacillus weihenstephanensis KBAB4]
Length=655

 Score =  280 bits (717),  Expect = 1e-73
 Identities = 189/560 (33%), Positives = 304/560 (54%), Gaps = 24/560 (4%)

Query  297  SQYMKLDIAAVRALNLFQG-SVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNR  355
            +Q+MK+D+ + R L L +    ++ TGS  L  LL+K KT  G R++ QW+++PL+ K +
Sbjct  16   NQFMKIDVHSKRNLELTETLRTKEKTGS--LLWLLDKTKTAMGGRMLKQWMERPLIQKEK  73

Query  356  IEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLP  415
            +EERL +VE FV D  LR+ L+E L   + DL RLA K      N +D  +L + + Q+P
Sbjct  74   VEERLEMVETFVNDYFLREDLKEKLKEVY-DLERLAGKVAFGNVNARDLLQLRRSLLQVP  132

Query  416  NVIQALEKHEGKHQKLLL--AVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPS  473
             +++A+   +  +   L+  A     LT+L       QE    ++    +      +K  
Sbjct  133  AILEAISLLDNAYAARLIQGADPCESLTELLG--RSIQENPPLSIKDGDI------IKDG  184

Query  474  FDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVL  533
            ++  L + R +  +  K   + L    RD+     K +K+  +  FGYY  VT      L
Sbjct  185  YNDKLDQYRYVSKN-GKTWIAELEKRERDI--TGVKSLKIGYNRIFGYYIEVTKANLGAL  241

Query  534  RNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQ  593
               + +       N  +F   +L        + + +  + +  +   +      ++  +Q
Sbjct  242  PEGR-YERKQTLANAERFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQ  300

Query  594  TLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVE-VQDEIAFIP  652
             L  V+++LD + SFA VS      +V+P +  K +  I +K  RH  VE V +   ++P
Sbjct  301  HLAKVISELDVLQSFATVSEEEQ--FVKPVLTNKRE--IFIKDGRHPVVEKVLNGKLYVP  356

Query  653  NDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARV  712
            ND    +   +F +ITGPNM GKSTY+RQ  ++ +M+QIGCFVP   A + + D I  R+
Sbjct  357  NDCIMPEKMDVF-LITGPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRI  415

Query  713  GAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIAT  772
            GA D  + G STFM EMLE  + + +A++ SLI+ DE+GRGTSTYDG  LA AI E+I  
Sbjct  416  GAADDLISGQSTFMVEMLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHD  475

Query  773  KIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAE  832
            +IGA  +F+TH+HELT L   +  + N+HV+A+     +  L++++ G  D+S+GIHVA+
Sbjct  476  QIGAKTLFSTHYHELTVLEESLDQLKNVHVSAIEENGKVVFLHKIQDGAADKSYGIHVAQ  535

Query  833  LANFPKHVIECAKQKALELE  852
            LA  P+ +I  AK+   +LE
Sbjct  536  LAELPESLIARAKEVLAQLE  555


>gi|75760974|ref|ZP_00740980.1|  DNA mismatch repair protein mutS [Bacillus thuringiensis serovar 
israelensis ATCC 35646]
Length=803

 Score =  280 bits (717),  Expect = 1e-73
 Identities = 186/561 (33%), Positives = 304/561 (54%), Gaps = 26/561 (4%)

Query  297  SQYMKLDIAAVRALNLFQG-SVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNR  355
            +Q+MK+D+ + R L L +    ++ TGS  L  LL+K KT  G R++ QW+++PL+ K +
Sbjct  162  NQFMKIDVHSKRNLELTETLRTKEKTGS--LLWLLDKTKTAMGGRMLKQWMERPLIQKEK  219

Query  356  IEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLP  415
            +EERL +VE FV D  LR+ L+E L   + DL RLA K      N +D  +L + + Q+P
Sbjct  220  VEERLEMVETFVNDYFLREDLKEKLKEVY-DLERLAGKVAFGNVNARDLLQLRRSLLQVP  278

Query  416  NVIQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMD---QVENHEFLVKP  472
             +++A+         LL   +   L           E++  ++  +    +++ + ++K 
Sbjct  279  AILEAIS--------LLDNAYAARLIQSADPCESLTELLGRSIQENPPLSIKDGD-IIKD  329

Query  473  SFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKV  532
             ++  L + R +  +  K   + L    RD+     K +K+  +  FGYY  VT      
Sbjct  330  GYNDKLDQYRYVSKN-GKTWIAELEKRERDI--TGVKSLKIGYNRIFGYYIEVTKANLAA  386

Query  533  LRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPM  592
            L   + +       N  +F   +L        + + +  + +  +   +      ++  +
Sbjct  387  LPEGR-YERKQTLANAERFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKL  445

Query  593  QTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVE-VQDEIAFI  651
            Q L  V+++LD + SFA VS      +V+P +  K +  I +K  RH  VE V +   ++
Sbjct  446  QHLAKVISELDVLQSFATVSEEEQ--FVKPVLTTKRE--IFIKDGRHPVVEKVLNGKLYV  501

Query  652  PNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILAR  711
            PND    +   +F +ITGPNM GKSTY+RQ  ++ +M+QIGCFVP   A + + D I  R
Sbjct  502  PNDCIMPEKMDVF-LITGPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTR  560

Query  712  VGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIA  771
            +GA D  + G STFM EMLE  + + +A++ SLI+ DE+GRGTSTYDG  LA AI E+I 
Sbjct  561  IGAADDLISGQSTFMVEMLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIH  620

Query  772  TKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVA  831
             +IGA  +F+TH+HELT L   +  + N+HV+A+     +  L++++ G  D+S+GIHVA
Sbjct  621  DQIGAKTLFSTHYHELTVLEESLDQLKNVHVSAIEENGKVVFLHKIQDGAADKSYGIHVA  680

Query  832  ELANFPKHVIECAKQKALELE  852
            +LA  P  +I  AK+   +LE
Sbjct  681  QLAELPDSLIARAKEVLAQLE  701


>gi|67939935|ref|ZP_00532415.1|  MutS 1 protein [Chlorobium phaeobacteroides BS1]
Length=864

 Score =  280 bits (717),  Expect = 1e-73
 Identities = 214/778 (27%), Positives = 392/778 (50%), Gaps = 75/778 (9%)

Query  158  QRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQII  217
            +R+ GV ++D    +  + +     Q   ++ +L  I P E +L   + +      R + 
Sbjct  132  ERRAGVAFIDVTTAEFRIADL----QPEQVKDMLQSIQPSEILLSSRDKSYSDTVSRILP  187

Query  218  QRGGILITERKKADFSTKDIYQDLNRLLK--GKKGEQMNSAVLPEMENQVAVSSLSAVIK  275
            Q   +++T      FS +   Q + R  K    KG  ++SA    +   V +  L+    
Sbjct  188  QE--VVVTILDDWMFSEESASQVIERHFKTHSLKGFGIDSAFAARVAAGVVLHYLA----  241

Query  276  FLELLSDDSNFGQFELTT----FDFSQYMKLDIAAVRALNLFQGSVEDTTGSQSLAALLN  331
                   D+   + +  T     D   +M LD+   R L +   S++D + S SL  +++
Sbjct  242  -------DTRQNRLQYITRIALVDARDHMTLDLQTKRNLEIIS-SMQDGSTSGSLLQVID  293

Query  332  KCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLA  391
            K   P G RL+ +W+ +PL   + I+ RL+ VE  +E+  +R+ L E L     DL R  
Sbjct  294  KTCNPMGARLLRRWLLRPLKRIDAIQARLDAVEVLIEEGAVRKALAEGL-GGIHDLERAL  352

Query  392  KKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQ  451
             +     +  ++   L   + +LP  IQAL K  G  +   L   +  L ++ S      
Sbjct  353  SRIATFRSMPREVRSLGSSLQKLP-AIQALLKDSGSDRLKKLVSGLDLLDEITS------  405

Query  452  EMIETTLDMD---QVENHEFLVKPSFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPG  508
             +IE+ +D +   ++ +  + ++  ++  L  LR + ++ +  +     +  R   +   
Sbjct  406  -IIESAIDPEAGAKLRDGGY-IRSGYNAELDLLRSVSSNAKSGLMEIQQAERRKTAIST-  462

Query  509  KQIKLDSSAQFGYYFRVT----------CKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTS  558
              +K+  +  FGYY  V+           ++++ L N + ++  ++++  VK  N+   S
Sbjct  463  --LKIQYNRVFGYYIEVSKANSDKVPDYYEKKQTLVNAERYTIAELKEYEVKILNADEKS  520

Query  559  LneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVP  618
                        +  +  + +++    +   + +Q   +++A+LD + S+A  S      
Sbjct  521  ------------QMLEQELFRDLCVRITACSKEIQQNAEIVAELDCLHSYACCSEA--YG  566

Query  619  YVRPAILEKGQGRIILKASRHACVE--VQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKS  676
            YV+P + E   G + +K  RH  +E  +  +  ++PND +F+K ++M  ++TGPNM GKS
Sbjct  567  YVKPEVKE--HGNLSIKNGRHPVLERILHVDEPYVPNDCFFDKKQRML-MVTGPNMAGKS  623

Query  677  TYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASIL  736
            +Y+RQ G+IVL+AQ+GCFVP ++AE+ +VD I  RVGA D+   G STF+ EM E A+IL
Sbjct  624  SYLRQNGLIVLLAQVGCFVPADAAEIGLVDRIFTRVGASDNLTSGESTFLVEMNEAANIL  683

Query  737  RSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPT  796
             +AT  SLI++DE+GRGTSTYDG  +AWA+SEYI + +GA  +FATH+HEL  L  +  +
Sbjct  684  NNATGKSLILLDEIGRGTSTYDGMSIAWAMSEYIQSVVGARTLFATHYHELAELEERFDS  743

Query  797  VNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQ--KALELEEF  854
            ++N + T + T + +  L ++ +G  D S+GI VA +A  P  VI+ AK+    +E  + 
Sbjct  744  ISNYNATVVETADKVVFLRKIVRGASDNSYGIEVARMAGMPSEVIQRAKEILSGMEKRDI  803

Query  855  QYIGESQGYDIMEPAAKKCYLEREQGEKIIQEFLSKVKQMPFTEMSEENITIKLKQLK  912
                  +    +EP +++ YL  E+  K+     + ++ +    M+  +  ++LK+L+
Sbjct  804  MISFGKECAGTIEPQSRQIYLFEEEERKL----KNAIEALNINTMTPLDALLELKKLQ  857


>gi|76800921|ref|YP_325929.1|  DNA mismatch repair protein [Natronomonas pharaonis DSM 2160]
Length=877

 Score =  280 bits (716),  Expect = 2e-73
 Identities = 243/849 (28%), Positives = 396/849 (46%), Gaps = 83/849 (9%)

Query  40   GDFYTAHGEDALLAAREVFKTQGVIKYMGPAGAKNLQSVVLSKMNFESFVKDLLLVRQYR  99
            GDFY   GEDA L   E+     +      +G ++     +   +   ++K  L  R YR
Sbjct  26   GDFYEFFGEDAELVGDEL----DLKVSERSSGGESYAMAGVPVDDLTPYLK-ALAERGYR  80

Query  100  VEVYKNRAGNKASKENDWYLAYKASPGNLSQFED--------ILFGNNDMSASIGVVGVK  151
            V V   R  +         +    +PG L + +D        +++ NN+   ++      
Sbjct  81   VAVADQRETDDGIVRE---VTRTVTPGTLVETDDADAKYLASVVYENNEYGLAL------  131

Query  152  MSAVDGQ-RQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKECVLPGGETAGDM  210
                 GQ R   V   D+  R L                 L + GP E +LPG     D 
Sbjct  132  CDITTGQFRATAVSGPDAADRAL---------------TELYRFGPVE-LLPGPTVRTDD  175

Query  211  GKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLKGKKGEQMNSAV-LPEMENQVAVSS  269
              L Q+         ER     +  D         + + GEQ   AV    +E+  AV++
Sbjct  176  SFLGQL--------RERLDGRLTLHDTDAFAPGRARARLGEQFGDAVDAVGLESDAAVAA  227

Query  270  LSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLFQGSVEDTTGSQSLAAL  329
              AVI +++     +      L  +    ++ LD    R L L +   E   G Q+L A 
Sbjct  228  AGAVIDYVDETGVGALASITRLQAYAPDDHVSLDGTTQRNLELTEPMTE---GGQTLFAT  284

Query  330  LNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNR  389
            ++  +T  G+RL+  W+K+PL  +  ++ R   V A V DA  R+ L+E L   + DL R
Sbjct  285  VDHTETSAGRRLLEAWLKRPLKRRGELDRRQQAVAALVGDALAREALRETLSSAY-DLER  343

Query  390  LAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVFVTPLTDLRSDFS-  448
            +A +     A+     R  + +  + ++   ++            +  +P+ DL +D   
Sbjct  344  VASRAVAGNADADALLRARETLGLVEDLRTRIDD--------AARLSSSPVADLFADLDV  395

Query  449  ----KFQEMIETTLDMDQVENHEF-LVKPSFDPNLSELREIMNDLEKKMQSTLISAARDL  503
                  +  +E   D      HE  L++  +D  L +L E      +  ++      R  
Sbjct  396  EAVETLRSELEALADDPPKTLHEGGLIRRGYDEELDDLVERHETAVEWFETLAEREKRAH  455

Query  504  GLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLneey  563
            GL     + +D +   GYY +V   E   + ++  +  +   KN  ++   +L     E 
Sbjct  456  GLT---HVTVDRNKTDGYYIQVGKSETDAVPDH--YEGIKTLKNAERYVFEELREKEREI  510

Query  564  tknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPA  623
             + +    + +      +    +   E +Q +   LA+LD   S A  ++ A   + RP 
Sbjct  511  LRLEEVRGDREYEAFCRLRESVADSAELLQRVGRTLAELDVYCSLA--AHAAKHGWTRPE  568

Query  624  ILEKGQGRIILKASRHACVEVQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTG  683
            + +     I ++A RH  VE   E+ F+PND+Y +++++ F ++TGPNM GKSTY+RQ  
Sbjct  569  LTDTRA--IDIEAGRHPVVET--EVQFVPNDLYLDRERR-FLLVTGPNMSGKSTYMRQAA  623

Query  684  VIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDS  743
            +I L+AQ+G FVP +SA V +VD +  RVGA D   +G STFM EM E ++IL SAT+DS
Sbjct  624  LITLLAQVGSFVPADSARVGLVDGVFTRVGALDELAQGRSTFMVEMEELSNILHSATEDS  683

Query  744  LIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHV-  802
            L+I+DE+GRGT+TYDG  +AWA +EY+  ++GAF +FATH+HELT LA+++P V N+HV 
Sbjct  684  LVILDEVGRGTATYDGISIAWAATEYLHNEVGAFTLFATHYHELTTLADELPRVENVHVA  743

Query  803  ---taltteetltMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEEFQYIGE  859
                    +  +T L  V+ G  D+S+G+HVA+LA  P  V++ A      L E + + E
Sbjct  744  VAGDPEDGDGDVTFLRTVEPGATDRSYGVHVADLAGVPDPVVDRAGAVLSRLREDRAV-E  802

Query  860  SQGYDIMEP  868
            ++G D  EP
Sbjct  803  AKGGDSGEP  811


>gi|28210987|ref|NP_781931.1|  DNA mismatch repair protein [Clostridium tetani E88]
Length=881

 Score =  279 bits (714),  Expect = 3e-73
 Identities = 220/762 (28%), Positives = 378/762 (49%), Gaps = 52/762 (6%)

Query  165  YVDSIQRKLGLCEFPDNDQFSNLEAL--------LIQIGPKECVLPGGETAGDMGKLRQI  216
            Y++     +  C+    D F+   +L        + +  P E +L       D   L++I
Sbjct  130  YIEDKSVAMCFCDISTGDFFATSHSLDKSIILDEISKFDPSELLL---NKDIDKNILKEI  186

Query  217  IQRGGILITERKKADFSTKDIYQDLNRLLKGKKGEQMNSAVLPEMENQVAVSSLSAVIKF  276
              R  I IT  +K      D ++D N L      E   S    E  + V +   + ++K+
Sbjct  187  KNRFTISITNLEK------DYFKDYNLL------EGQFSDFSKEEYSLVLIKCGNGLLKY  234

Query  277  LELLSDDSNFGQFE-LTTFDFSQYMKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKT  335
            + L +   + G  +    ++   Y+ +DI + R L + + ++ D +   SL  +L+KC T
Sbjct  235  I-LETQKMSLGHIDCFKNYNIVDYLSMDINSRRNLEITE-TIRDKSRKGSLLWVLDKCST  292

Query  336  PQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQ  395
              G RL+  W++QPL++K +I++RLN VE  V +  L + L+ D L+   D+ R+  K  
Sbjct  293  AMGARLIRNWVEQPLINKEKIDKRLNAVEELVLNISLHEDLK-DALKDIYDIQRIVGKIS  351

Query  396  RQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIE  455
             +  N ++   L   I +LP +   L K E    K +L+     L +L+  +   +  I 
Sbjct  352  SKNVNAKELLSLKNSIEKLPYIKDILSKLEADLFKDMLS----NLDELKDIYELLESSIM  407

Query  456  TTLDMDQVENHEFLVKPSFDPNLSELREIMNDLEKKMQSTLISAARDL-GLDPGKQIKLD  514
                +   + +  L+K  F+  + ELR +     K+  + L S+ R+  G+   K +K+ 
Sbjct  408  DNPPITIKDGN--LIKNGFNKEIDELR-MAKSHGKEWIANLESSEREFTGI---KSLKVG  461

Query  515  SSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQ  574
             +  FGY+  VT      +   + +       N  ++   +L  + ++    + +    +
Sbjct  462  YNKVFGYFIEVTKSNISSVPEGR-YVRKQTLSNCERYITPELKEMEDKILGAEEKLISLE  520

Query  575  DAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIIL  634
              +   I N     ++ M+   +++A LD + S + V+      Y +P ILE     II+
Sbjct  521  YEVFVSIRNSIEKDIDRMKISANIVAILDCLSSLSTVA--LENNYSKPKILEGND--III  576

Query  635  KASRHACVEVQDEI-AFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGC  693
            K  RH  VE      +F+ ND   + +     +ITGPNM GKSTY+RQ  +I +MAQIG 
Sbjct  577  KDGRHPVVEKMIPTGSFVANDTTMDTEDNQMLLITGPNMAGKSTYMRQVALITIMAQIGS  636

Query  694  FVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRG  753
            FVP + A +S+ D I  R+GA D    G STFM EM E ++IL++AT  SLII+DE+GRG
Sbjct  637  FVPAKEASISLCDKIFTRIGASDDLSAGKSTFMVEMWEVSNILKNATSKSLIILDEVGRG  696

Query  754  TSTYDGFGLAWAISEYIAT--KIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetl  811
            TST+DG  +AWA+ EYI     + +  +FATH+HEL  L N+I  V N  V+    ++ +
Sbjct  697  TSTFDGLSIAWAVIEYICNNKNLRSKTLFATHYHELIQLENKIKGVKNYSVSVKEMDKDI  756

Query  812  tMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEEFQYIGESQGYDIMEPAAK  871
              L ++ +G  DQS+GI VA+LA  P+ VI  AK+    +E+     +    ++ +    
Sbjct  757  VFLRKIIEGGADQSYGIEVAKLAGLPEDVIIRAKEILNSIEQ----NKDNKIELDDIKEN  812

Query  872  KCYLEREQGEKIIQEFL--SKVKQMPFTEMSEENITIKLKQL  911
            K ++E+E  ++I  + L  +   Q+ FT++ EEN+  ++  +
Sbjct  813  KNHIEKENKKEIATDKLLANDDFQISFTQIEEENLIKEISSI  854


>gi|51892895|ref|YP_075586.1|  DNA mismatch repair protein [Symbiobacterium thermophilum IAM 
14863]
Length=875

 Score =  278 bits (712),  Expect = 5e-73
 Identities = 253/850 (29%), Positives = 401/850 (47%), Gaps = 65/850 (7%)

Query  19   FVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMGPAGAKNLQSV  78
            F ++ Q + E+    +  +  GDFY    +DA L ARE+      +   G    K++  V
Sbjct  10   FAQYLQ-IKEQYPDCILFYRLGDFYETFMDDAELVAREL-----ELVLTGRDAGKDMGRV  63

Query  79   VLSKMNF---ESFVKDLLLVRQYRVEVYKNRAGNKASK---ENDWYLAYKASPGNLSQFE  132
             ++ + +   E+++   L+ + Y+V +       K +K   + D  +    +PG L +  
Sbjct  64   PMAGIPYHAAEAYIA-RLIEKGYKVAICDQLEDPKKAKGLVKRD--VTRVVTPGTLVEPR  120

Query  133  DILFGNNDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLI  192
             +    N+  A+I            +   G+  VD    +    +    D   +L  LL 
Sbjct  121  LLPEKANNFLAAIAW---------SRTGFGLAVVDLSTGEFAAAQMNGAD---SLRLLLE  168

Query  193  QIG---PKECVLPGGETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLKGKK  249
            +IG   P+E +L  G  A     +   ++  GI ++  +   F+  + Y+ L        
Sbjct  169  EIGRLEPREVILEPGLAAEP--SVTGPLKASGIAVSVFEGRHFNHANAYRKLT-------  219

Query  250  GEQMNSAVLPEM---ENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAA  306
             E   +A L      + ++A S+  A + +LE +   S      L  +    YM LD A 
Sbjct  220  -EHFGTANLSGFGCEDLELATSAAGAALAYLEEMHKASLGHVSGLAVYYPGDYMVLDPAT  278

Query  307  VRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAF  366
             R L L + S+ D     +L  ++++  T  G RL+  W+++PL+D  +I  R   V   
Sbjct  279  RRNLELTR-SLRDGGRRGTLLWVMDRTVTAMGARLLKSWLERPLLDLRQIHARHEAVGEL  337

Query  367  VEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEG  426
            V    LR  L+  LL+   DL RLA +    +AN +D   L Q +  LP++  ALE    
Sbjct  338  VHRPVLRADLRA-LLQEVHDLERLAGRVAVGSANARDLVALKQSLVALPSIRVALED---  393

Query  427  KHQKLLLAVFVTPLTDLRSDFSKFQEMIETTL-DMDQVENHE-FLVKPSFDPNLSELREI  484
                 + A  +  L D        +++IE  + D   V   E  ++K  F P + ELR I
Sbjct  394  -----VRAERLVELRDQLDMLDDVRDLIEHAIADEPPVALTEGGILKDGFHPEVDELRRI  448

Query  485  MNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDI  544
              D +  +           G+   K +K+  +  FGYY  VT     ++    ++     
Sbjct  449  ARDGKAWIAQVEARERERTGI---KSLKIGYNKVFGYYLAVTKPNLPLV--PPDYIRKQT  503

Query  545  QKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDA  604
              N  +F   +L  L E+         + +  +  EI    +  V  +Q     +A+LDA
Sbjct  504  LANEERFITPELKELEEKVLHAAERVMDLEYELFVEIRQRVAAEVTRIQRSARAVAELDA  563

Query  605  VVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVE-VQDEIAFIPNDVYFEKDKQM  663
            + SFA V+  +   Y RP  L  G   + LK SRH  +E V +E AF+PND+  +  +  
Sbjct  564  LASFAEVA--SLYGYCRP--LVDGSTVLELKGSRHPVLERVMEEGAFVPNDLLVDTGENR  619

Query  664  FHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVS  723
              +ITGPNMGGKST +RQ  + V++AQ G FVP ESA + +VD +  RVGA D    G S
Sbjct  620  VLLITGPNMGGKSTVMRQAALAVILAQAGSFVPAESAHIGLVDRVFTRVGASDDLATGRS  679

Query  724  TFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATH  783
            TFM EM E A+IL SAT+ SL+++DE+GRGT+T+DG  +AWAI+E+I   IG   +FATH
Sbjct  680  TFMVEMTEVANILHSATERSLVVLDEVGRGTATFDGLSIAWAITEHIHQAIGCRTLFATH  739

Query  784  FHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKHVIEC  843
            +HEL  L   +P V N  V  +   E +  L ++ +G  D+S+GI V  LA  P  V+E 
Sbjct  740  YHELCELEGILPGVKNYSVAVMEKGEDIIFLRKLVRGGADRSYGIQVGRLAGLPASVVER  799

Query  844  AKQKALELEE  853
            A++    LEE
Sbjct  800  AREILATLEE  809


>gi|67458875|ref|YP_246499.1|  DNA mismatch repair protein [Rickettsia felis URRWXCal2]
Length=886

 Score =  278 bits (711),  Expect = 6e-73
 Identities = 229/834 (27%), Positives = 399/834 (47%), Gaps = 59/834 (7%)

Query  36   LFDRGDFYTAHGEDALLAAREVFKTQGV-IKYMGPAGAKNLQSVVLSKMNFESFVKDLLL  94
            LF  GDFY    EDA+LA+  +    G+ +   G  G + +    +     E+++  L+ 
Sbjct  35   LFRMGDFYEMFYEDAILASNVL----GIALTKRGKNGEEEIAMCGVPYHALENYLTKLI-  89

Query  95   VRQYRV---------EVYKNRAGNKASKENDWYLAYKASPGNLSQFEDILFGNNDMSASI  145
               Y+V         E  KNR G KA    D  +    +PG + +   I     +  AS+
Sbjct  90   EENYKVAICDQLETPEEAKNRGGYKAVVTRD--VTRIITPGTIIEENLIASAEPNYLASL  147

Query  146  GVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKECVLPGGE  205
             +   K +A        + YVD    ++ +   P+ +  + L  L     P+E +L    
Sbjct  148  VITKNKETA-------SLCYVDLSTSEIFVVNVPEAEILNELARLK----PREILLSENL  196

Query  206  TAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLKGKKGEQMNSAVLPEMENQV  265
             + ++     I ++    IT +  + F+     + +    K K  + +          ++
Sbjct  197  RSSNLAD--SIFKQLNFRITYQVDSFFAINKCEKIILDFYKMKDIKGIG---------EI  245

Query  266  AVSSLSAVIKFLELLS--DDSNFGQFELTTF-DFSQYMKLDIAAVRALNLFQGSVEDTTG  322
            + S + A+   LE LS     N     +    +F  YM +D A  R L +   S     G
Sbjct  246  SSSQICAIGSILEYLSLTQKQNIPHLPIPRIINFHSYMTIDFATRRNLEIVTNSQGTLKG  305

Query  323  SQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLLR  382
            S  L   LN   T QG RL+  ++  PL +  +I  RLN+ E F  + E+ + ++E LL+
Sbjct  306  S--LLNTLNHTVTKQGGRLLYNFLSSPLTNIAKINHRLNITEFFYSNLEIVKRIRE-LLK  362

Query  383  RFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVFVTPLTD  442
            +  D+ R   +     ++ +D   +   +     +        G +    +   + PL+ 
Sbjct  363  KTSDIERCLTRITMNRSSGRDLLSIKYTLEAATIIKGVFFDAYGFNLPDFIEKIIKPLSG  422

Query  443  LRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIMNDLEKKMQSTLISAARD  502
                ++   E I    D     N   ++K  + P +++L +++N+ +  ++       ++
Sbjct  423  DAELYNLIDESIRE--DAPNNLNDGGIIKHEYHPKVAQLHDLINNGKLHIEKLKDQYCKE  480

Query  503  LGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLnee  562
             G+D    +K+  +   G +  +T K    + + K F       N V++T ++L  L  E
Sbjct  481  TGID---SLKISHNNVIGLFIDITAKNVNKILDPK-FIHRQTTVNSVRYTTTELQKLESE  536

Query  563  ytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRP  622
                KT     +  +  +I N        ++ L   L+ LD   +FA++++     YV+P
Sbjct  537  LANAKTLVISLEKELYADICNQVIEKASYLRMLASSLSGLDVFCNFAYIAD--EYDYVKP  594

Query  623  AILEKGQGRIILKASRHACVEV---QDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYI  679
               +     I+    RH  VE    ++  +F+ ND +  + ++++ +ITGPNM GKST++
Sbjct  595  EFTDDLSFDIV--KGRHPVVEKALKRESKSFVYNDCHLSEFERIW-LITGPNMAGKSTFL  651

Query  680  RQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSA  739
            RQ  +I ++AQIG FVP +SA++ +VD I +R+GA D  ++G STFMAEMLET++IL  +
Sbjct  652  RQNAIIAIIAQIGSFVPAKSAKIGVVDKIFSRIGAADDLIRGQSTFMAEMLETSAILAQS  711

Query  740  TKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPTVNN  799
            TK+SLII+DE+GRGTSTYDG  +AW++ EYI  K+   C+FATH+HELT ++N +P + N
Sbjct  712  TKNSLIILDEVGRGTSTYDGVSIAWSVLEYIHDKLKCRCLFATHYHELTVMSNFLPALQN  771

Query  800  LHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEE  853
              +    + + +  L+ +  G  D+S+GIHVA LA  P  VI  A+Q  L+ E+
Sbjct  772  YTIAIEESGKDILFLHNIISGAADRSYGIHVAALAGLPASVINRAEQILLKFEK  825


>gi|30021861|ref|NP_833492.1|  DNA mismatch repair protein [Bacillus cereus ATCC 14579]
Length=884

 Score =  278 bits (711),  Expect = 6e-73
 Identities = 191/561 (34%), Positives = 304/561 (54%), Gaps = 26/561 (4%)

Query  297  SQYMKLDIAAVRALNLFQG-SVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNR  355
            +Q+MK+D+ + R L L +    ++ TGS  L  LL+K KT  G R++ QW+++PL+ K R
Sbjct  245  NQFMKIDVHSKRNLELTETLRTKEKTGS--LLWLLDKTKTAMGGRMLKQWMERPLIQKER  302

Query  356  IEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLP  415
            IEERL +VE FV D  LR+ L+E L   + DL RLA K      N +D  +L + + Q+P
Sbjct  303  IEERLEMVETFVNDYFLREDLKEKLKEVY-DLERLAGKVAFGNVNARDLLQLRRSLLQVP  361

Query  416  NVIQALEKHEGKHQKLLL--AVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPS  473
             +++A+   +  +   L+  A     LT+L       QE    ++    +      +K  
Sbjct  362  AILEAISLLDNAYASRLIQGADPCESLTELLG--RSIQENPPLSIKDGDI------IKDG  413

Query  474  FDPNLSELREIMNDLEKKMQSTLISAARDL-GLDPGKQIKLDSSAQFGYYFRVTCKEEKV  532
            ++  L + R +  +  K   + L    RD+ G+   K +K+  +  FGYY  VT      
Sbjct  414  YNDKLDQYRYVSKN-GKTWIAELEKRERDITGI---KSLKIGYNRIFGYYIEVTKANLAA  469

Query  533  LRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPM  592
            L   + +       N  +F   +L        + + +  + +  +   +      ++  +
Sbjct  470  LPEGR-YERKQTLANAERFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKL  528

Query  593  QTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVE-VQDEIAFI  651
            Q L  V+++LD + SFA VS      +V+  +  K +  I +K  RH  VE V +   ++
Sbjct  529  QHLAKVISELDVLQSFATVSEEEQ--FVKLVLTTKRE--IFIKDGRHPVVEKVLNGKLYV  584

Query  652  PNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILAR  711
            PND    +   +F +ITGPNM GKSTY+RQ  ++ +M+QIGCFVP   A + + D I  R
Sbjct  585  PNDCIMPEKMDVF-LITGPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTR  643

Query  712  VGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIA  771
            +GA D  + G STFM EMLE  + + +A++ SLI+ DE+GRGTSTYDG  LA AI E+I 
Sbjct  644  IGAADDLISGQSTFMVEMLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIH  703

Query  772  TKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVA  831
             +IGA  +F+TH+HELT L   +  + N+HV+A+     +  L++++ G  D+S+GIHVA
Sbjct  704  DQIGAKTLFSTHYHELTVLEESLDQLKNVHVSAIEENGKVVFLHKIQDGAADKSYGIHVA  763

Query  832  ELANFPKHVIECAKQKALELE  852
            +LA  P  +I  AK+   +LE
Sbjct  764  QLAELPDSLIARAKEVLAQLE  784


>gi|71282195|ref|YP_270792.1|  DNA mismatch repair protein [Colwellia psychrerythraea 34H]
Length=872

 Score =  277 bits (708),  Expect = 1e-72
 Identities = 191/573 (33%), Positives = 302/573 (52%), Gaps = 54/573 (9%)

Query  302  LDIAAVRALNLFQ---GSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEE  358
            LD A  R L L Q   G +++T     LAA+L+K  TP G RL+ +W+  PL D   +  
Sbjct  281  LDAATRRNLELTQNLHGGLDNT-----LAAILDKSSTPMGSRLLKRWLHFPLRDLTVLNN  335

Query  359  RLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVI  418
            R N V   +   +L   +Q  LL+   D+ R+  +    +A  +D  RL   + QLP + 
Sbjct  336  RQNTVSDIIA-LDLIAPIQP-LLKGLGDIERIVSRIALGSARPRDFARLRHALQQLPELQ  393

Query  419  QALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVK------P  472
              L+    +     LA             S+    +E  L    VEN   L++      P
Sbjct  394  NELKSGLTESPTNYLATIAQQ--------SQPMPQLEGLLVHAIVENPPVLIRDGGVIAP  445

Query  473  SFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCK----  528
             ++  L  LR++ +   + +           G+     +K+  +   G++  ++      
Sbjct  446  GYNNELDVLRDLSDGATEFLAQLEQREKERTGIH---SLKVGYNRVHGFFIEMSRTAAVD  502

Query  529  ------EEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIV  582
                    + L+NN+ F T +++++  K  +++   L              + ++ +E+ 
Sbjct  503  VPDDYIRRQTLKNNERFITEELKQHEEKVLSAQSKFLAL------------EKSLYQELF  550

Query  583  NISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACV  642
            +     +  +Q L+  +A+LD + +FA       + YV+P+++E  +  I + A RH  V
Sbjct  551  DKVLPDLAQLQQLSQAIAELDVLTTFAE--RALALNYVKPSLVE--EPGISIDAGRHVVV  606

Query  643  EVQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEV  702
            E     AFI N V   + ++M  IITGPNMGGKSTY+RQT +IVL+A IGC+VP ++A +
Sbjct  607  EQMTNDAFIANPVLLTEQRKML-IITGPNMGGKSTYMRQTALIVLLAHIGCYVPADNATI  665

Query  703  SIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGL  762
             +VD I  R+GA D    G STFM EM ETA+IL +AT  SL+++DE+GRGTSTYDG  L
Sbjct  666  GLVDRIFTRIGASDDLASGRSTFMVEMTETANILHNATDKSLVLLDEIGRGTSTYDGLSL  725

Query  763  AWAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVC  822
            AWA +E +A K  AF +FATH+ ELT LA QI T+ N+H+ A+  ++ +  ++ V++G  
Sbjct  726  AWACAEMLALKTKAFTLFATHYFELTLLAGQISTLANVHLDAMEHDDNIVFMHAVQEGAA  785

Query  823  DQSFGIHVAELANFPKHVIECAKQKALELEEFQ  855
             +SFG+ VA+LA  PK VI+ AKQ+  ELE+ Q
Sbjct  786  SKSFGLQVAQLAGVPKTVIKRAKQRLSELEQQQ  818


>gi|89100701|ref|ZP_01173557.1|  DNA mismatch repair protein [Bacillus sp. NRRL B-14911]
Length=883

 Score =  277 bits (708),  Expect = 1e-72
 Identities = 183/571 (32%), Positives = 297/571 (52%), Gaps = 36/571 (6%)

Query  293  TFDFSQYMKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMD  352
            T+   Q+MK+D  + R L L + ++       SL  LL++ KT  G R++ QWI +PL+D
Sbjct  246  TYQVHQFMKIDYFSKRNLELTE-TIRSKGKKGSLLWLLDETKTAMGARMLKQWIDRPLID  304

Query  353  KNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGIN  412
            K  I  R +LV++ ++D   RQ L+E L   + DL RLA +      N +D  +L   + 
Sbjct  305  KEAIGRRHSLVQSLLDDYFARQDLREKLKEVY-DLERLAGRVAFGNVNARDLIQLKSSLL  363

Query  413  QLP---NVIQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFL  469
            Q+P    ++  L+  + K            L +      +  +++E+ +    V+N    
Sbjct  364  QVPLLKELVGGLQNEDAK-----------ALAEKLDACEEITDLLESAI----VDNPPIS  408

Query  470  VKPS------FDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYF  523
            VK        +   L + R+   + +  +           G+   K +K+  +  FGYY 
Sbjct  409  VKDGNMIRDGYHDELDQYRDASRNGKTWIAQLEAQERERTGI---KSLKIGYNRVFGYYI  465

Query  524  RVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVN  583
             VT     +L   + +       N  ++   +L        + +    E +  +   + +
Sbjct  466  EVTKANIHLLEEGR-YDRKQTLANAERYITPELKEKETLILEAEERITELEYELFCHVRD  524

Query  584  ISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVE  643
                Y+  +Q+L   +++LD +  FA +S      YVRP     G   I +K  RH  VE
Sbjct  525  HVKEYIPRLQSLARTVSELDVLQCFAQISEDRH--YVRPVF--SGNREISVKEGRHPVVE  580

Query  644  -VQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEV  702
             V D   ++PND      +++  +ITGPNM GKSTY+RQ  +  ++AQIGC+VP   A +
Sbjct  581  KVMDSQEYVPNDCVMGDGRELL-LITGPNMSGKSTYMRQVALTSILAQIGCYVPASEAVL  639

Query  703  SIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGL  762
             I D +  R+GA D  + G STFM EMLE  + + +AT++SLI+ DE+GRGTSTYDG  L
Sbjct  640  PIFDQVFTRIGAADDLISGQSTFMVEMLEAKNAIANATQNSLILFDEIGRGTSTYDGMAL  699

Query  763  AWAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVC  822
            A AI EYI ++IGA  +F+TH+HELT LA ++P + N+HV+A+     +  L+++K+G  
Sbjct  700  AQAIIEYIHSRIGAKTLFSTHYHELTVLAEELPDLQNIHVSAIEQNGKVVFLHKIKEGAA  759

Query  823  DQSFGIHVAELANFPKHVIECAKQKALELEE  853
            D+S+GIHVA+LA  P  +I+ A +   +LE+
Sbjct  760  DKSYGIHVAQLAELPSELIDRANEILEKLEK  790


>gi|15895112|ref|NP_348461.1|  DNA mismatch repair protein [Clostridium acetobutylicum ATCC 
824]
Length=869

 Score =  276 bits (706),  Expect = 2e-72
 Identities = 202/648 (31%), Positives = 331/648 (51%), Gaps = 39/648 (6%)

Query  290  ELTTFDFSQYMKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQP  349
            EL  ++   ++ +DI + R L L + +++D +   SL  +L+K  T  G R + +WI++P
Sbjct  250  ELQKYEIVDFLSIDINSRRNLELTE-TLKDKSKKGSLLWVLDKTSTAMGGRQIRKWIERP  308

Query  350  LMDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQ  409
            L+D  +I  RL+ VE  + +    + L+E LL++  D+ RLA K   ++ N ++   L  
Sbjct  309  LIDDEKINLRLDAVEEMLTNVSYNEDLKE-LLKQVYDIERLAGKISSKSVNAKEMISLRG  367

Query  410  GINQLPNVIQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFL  469
             I +LP + + ++    +    LL      L DL   +    E I     +   E +  +
Sbjct  368  SIEKLPAIKKLIKNFNSE----LLVNMENALDDLGDIYKLLYESINDNPSLSIKEGN--I  421

Query  470  VKPSFDPNLSELREIMNDLEKKMQSTLISAARDL-GLDPGKQIKLDSSAQFGYYFRVTCK  528
            +K  ++ ++ ELR +     K+  ++L +  R++ G+   K +K+  +  FGYY  +T K
Sbjct  422  IKEGYNKDIDELR-LAKSHGKQWIASLENTEREVTGI---KSLKVSYNKVFGYYIEIT-K  476

Query  529  EEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGY  588
                L     +       N  ++   +L  + E+    + +    +  +  EI       
Sbjct  477  SNLNLVPEGRYIRKQTLTNSERYITPELKEMEEKILGAEEKLVLLEYNVFCEIRERIEKE  536

Query  589  VEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVE-VQDE  647
            ++ ++    +L++LD + SFA V+      Y +P I  K  G +++K  RH  VE V   
Sbjct  537  IDRIKGSAKILSELDCICSFADVARENN--YCKPVI--KRDGTLVIKEGRHPVVEKVIAS  592

Query  648  IAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDC  707
              F+ ND        +  +ITGPNM GKSTY+RQ G+IVLMAQIGCFVP  +AE+SI D 
Sbjct  593  GNFVANDTVINNSDNVMMLITGPNMAGKSTYMRQVGLIVLMAQIGCFVPASAAEISICDK  652

Query  708  ILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAIS  767
            I  R+GA D    G STFM EM E + IL++ATK+SLI++DE+GRGTSTYDG  +AW++ 
Sbjct  653  IFTRIGASDDLNAGKSTFMVEMWEVSHILKNATKNSLILLDEVGRGTSTYDGLSIAWSVI  712

Query  768  EYIATKIGAFC--MFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQS  825
            EYI       C  +FATH+HELT L  +I  + N  +      + +  L ++     D+S
Sbjct  713  EYICKSENLKCKTLFATHYHELTKLEGEIEGLKNYSIAVKKVNDDIIFLRKIISKGADES  772

Query  826  FGIHVAELANFPKHVIECAKQKALELEEFQYIGESQGYDIMEPAAKKCYLEREQGEKIIQ  885
            +GI VA++A  P+ V+  A++   +LEE +        D      KK  + +E+ +K   
Sbjct  773  YGIEVAKIAGLPEEVLVRAREILKDLEEAKPKTAENTED------KKTNIVKEEPKK---  823

Query  886  EFLSKVKQMPFTEMSEENITIKLKQLKAEVIAKNNSF--VNEIISRIK  931
                   Q+ F  +  E+I   LK+LK   I   N    +N++   IK
Sbjct  824  ----DSYQIDFNYLERESI---LKELKDTEIMDMNPIECMNKLYEFIK  864


>gi|76792442|ref|ZP_00774941.1|  MutS 1 protein [Pseudoalteromonas atlantica T6c]
Length=889

 Score =  276 bits (705),  Expect = 3e-72
 Identities = 229/837 (27%), Positives = 400/837 (47%), Gaps = 69/837 (8%)

Query  34   VRLFDR-GDFYTAHGEDALLAAREVFKTQGVIKYMGPAGAKNLQSVVLSKMNFESFVKDL  92
            + LF R GDFY    +DA  AA  +  +   +   G +G   +    +     E+++  L
Sbjct  38   ILLFYRMGDFYELFFDDAKKAAELLDIS---LTARGKSGGNAIPMAGVPYHAVENYLARL  94

Query  93   LLVRQYR--VEVYKNRAGNKASKENDWYLAYKASPGNLSQFEDILFGNNDMSASIGVVGV  150
            + + Q    VE   + A +K   E    +    +PG +S  E +L  N+   + +  V  
Sbjct  95   VKMGQSVAIVEQVGDPATSKGPVERK--VQRIVTPGTVSD-EALL--NDKQDSILAAVFC  149

Query  151  KMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKECVLPGGETAGDM  210
                 + +   G   +D    +  LCE    +    L A L +  P E + P      D 
Sbjct  150  PTQKANQELIFGYATLDVTSGRFTLCELSGEEA---LAAELQRTNPVELLYPD-----DF  201

Query  211  GKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLKGKKGEQMNSAVLPEMENQVAVSSL  270
                 I QR G+    R + +F   D+    N+L       +++   +    +QV + + 
Sbjct  202  AYSHLINQRKGL--RRRPQWEF---DLQTATNQLTSQFGTNELSGFGV--QNHQVGICAA  254

Query  271  SAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNL---FQGSVEDTTGSQSLA  327
              V+++++     +      +     +  + +D A  R L L     G +E+T     LA
Sbjct  255  GCVMQYIKDTQRSALPHIDRIVLESHNDTVVMDAATRRNLELTFNLSGGIENT-----LA  309

Query  328  ALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDL  387
            ++L+K  TP G RL+ +WI +PL D   +++R   ++  +E      T  +  L++  D+
Sbjct  310  SILDKTSTPMGSRLLQRWIHRPLTDVTVLKKRQRNIQGLMESP---YTQLQSALKKIGDM  366

Query  388  NRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVFVTPLTDLRSDF  447
             R+  +   ++A  +D  RL Q    LP++   LE       +      +  L +  S +
Sbjct  367  QRVLARLALRSARPRDFARLRQAFALLPDIQHYLEHEISHTSESAQPSDLLHLAEKISQY  426

Query  448  SKFQEMIE-TTLDMDQVENHEF-LVKPSFDPNLSELREIMNDLEKKMQSTLISAARDLGL  505
              F +++E   ++   V   +  ++K  ++  L  LRE+       ++   +      G+
Sbjct  427  PDFADLLERAVIEAPPVLIRDGGVIKEGYNEELDRLRELSKGATDYLEELELREKERTGI  486

Query  506  DPGKQIKLDSSAQFGYYFRVTCKEE----------KVLRNNKNFSTVDIQKNGVKFTNSK  555
                 +K+  +   GY+  V+  +           + L+NN+ +   +++++     +S+
Sbjct  487  ---ASLKVGYNRVHGYFIEVSRSQSDLVPVEYVRRQTLKNNERYIIPELKEHEDNVLSSQ  543

Query  556  LTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGA  615
              SL              +  +  E+ ++    +  +    D LA+LD + + A  +   
Sbjct  544  SRSLAL------------EKRLYDELFDLLLPQLTQLMQSADALAELDVLTNLAERAES-  590

Query  616  PVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYFEKDKQMFHIITGPNMGGK  675
             + Y RP +    Q  I     RH  VE   +  FI N +    D++M  +ITGPNMGGK
Sbjct  591  -LDYHRPELCP--QSGIHFSQGRHPVVEQVSDAPFIANPINVNPDRRML-VITGPNMGGK  646

Query  676  STYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASI  735
            STY+RQT +IVLMA IG ++P + A++  +D I  R+GA D    G STFM EM ETA+I
Sbjct  647  STYMRQTALIVLMAYIGSYIPAQDAQIGPIDRIFTRIGASDDLASGRSTFMVEMTETANI  706

Query  736  LRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIP  795
            L +AT +SL+++DE+GRGTSTYDG  LAWA +EY+ATK+ +F +FATH+ ELT LA+ +P
Sbjct  707  LNNATANSLVLMDEIGRGTSTYDGLSLAWACAEYLATKLQSFTLFATHYFELTGLADALP  766

Query  796  TVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELE  852
             + N+H+ A+   E++  ++ V+ G  ++S+G+ VA+LA  PK V++ AK+K  ELE
Sbjct  767  ELANVHLDAVEHGESIRFMHAVQDGAANKSYGLQVAQLAGVPKLVVQAAKRKLHELE  823


>gi|34580662|ref|ZP_00142142.1|  DNA mismatch repair protein MutS [Rickettsia sibirica 246]
Length=886

 Score =  275 bits (703),  Expect = 5e-72
 Identities = 229/836 (27%), Positives = 403/836 (48%), Gaps = 63/836 (7%)

Query  36   LFDRGDFYTAHGEDALLAAREVFKTQGV-IKYMGPAGAKNLQSVVLSKMNFESFVKDLLL  94
            LF  GDFY    EDA+LA+  +    G+ +   G  G + +    +     E+++  L+ 
Sbjct  35   LFRMGDFYEMFYEDAILASNVL----GIALTKRGKNGEEEIAMCGVPYHALENYLTKLIE  90

Query  95   VRQYRV---------EVYKNRAGNKASKENDWYLAYKASPGNLSQFEDILFGNNDMSASI  145
               Y+V         E  KNR G KA    D  +    +PG + +   I     +  AS+
Sbjct  91   AN-YKVAICDQLETPEEAKNRGGYKAVVTRD--VTRIITPGTIIEENLIASAEPNYLASL  147

Query  146  GVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKECVLPGGE  205
             +   K +A        + YVD    ++ +   P+ +  + L  L     P+E +L    
Sbjct  148  VIPKNKETA-------SLCYVDLSTSEIVVVNVPETEILNELARLK----PREILLSENL  196

Query  206  TAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLKGKKGEQMNSAVLPEMENQV  265
             + ++     I ++    IT +  + F+     + +    K K  + +          ++
Sbjct  197  RSSNLAD--SIFKQLNFRITYQVDSFFAINKCEKIILDFYKMKDIKGIG---------EI  245

Query  266  AVSSLSAVIKFLELLS--DDSNFGQFELTTF-DFSQYMKLDIAAVRALNLFQGSVEDTTG  322
            + S + A+   LE LS     N     +     F  YM +D +  R L +   S   + G
Sbjct  246  SSSQICAIGSVLEYLSLTQKQNIPHLPIPRIIKFHSYMTIDFSTRRNLEIVTHSQGGSQG  305

Query  323  SQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLLR  382
            S  L + LN   T QG RL+  ++  PL +  +I  RLN+ E F  + E+ + ++E LL+
Sbjct  306  S--LLSTLNHTVTKQGGRLLYNFLSSPLTNIAKINHRLNITEFFYSNLEIVKKIRE-LLK  362

Query  383  RFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVFVTPLTD  442
            +  D+ R   +     ++ +D   +   +     +        G +    +   + PL  
Sbjct  363  KTSDIERCLTRITMNRSSGRDLLSIKYTLETATIIKGVFFDAYGFNLPDFIEKIIKPL--  420

Query  443  LRSDFSKFQEMIETTLDMDQVENHEF--LVKPSFDPNLSELREIMNDLEKKMQSTLISAA  500
              S  ++   +I+ T+  D   N     ++K  + P +++L +++N+ +  ++       
Sbjct  421  --SGDAELYNLIDKTIREDAPNNLNDGGIIKHKYHPKVAQLHDLINNGKLYIEKLKDQYR  478

Query  501  RDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLn  560
            ++ G+D    +K+  +   G +  +T K    + + K F       N V++T ++L  L 
Sbjct  479  KETGID---SLKISHNNVIGLFIDITAKNVNKILDPK-FIHRQTTVNHVRYTTAELQKLE  534

Query  561  eeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYV  620
             E    KT     +  +  +I +        ++ L   L+ LD   +FA++++     YV
Sbjct  535  SELVNAKTLVISLEKELYADICSQVIEKASYLRMLASSLSGLDVFCNFAYIAD--EYDYV  592

Query  621  RPAILEKGQGRIILKASRHACVE---VQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKST  677
            +P   +     I+    RH  VE    Q+  +F+ ND +  + ++++ +ITGPNM GKST
Sbjct  593  KPEFTDDLSFDIV--KGRHPVVERALQQESKSFVYNDCHLSELERIW-LITGPNMAGKST  649

Query  678  YIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILR  737
            ++RQ  +I ++AQIG FVP +SA++ +VD I +R+GA D  +KG STFMAEMLET++IL 
Sbjct  650  FLRQNAIIAIIAQIGSFVPAKSAKIGVVDKIFSRIGAADDLIKGQSTFMAEMLETSAILA  709

Query  738  SATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPTV  797
             +TK+SLII+DE+GRGTSTYDG  +AW++ EYI  K+   C+FATH+HELT ++N +P +
Sbjct  710  QSTKNSLIILDEVGRGTSTYDGVSIAWSVLEYIHDKLKCRCLFATHYHELTVMSNFLPAL  769

Query  798  NNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEE  853
             N  +    + + +  L+ +  G  D+S+G+HVA LA  P  VI  A+Q  L+ E+
Sbjct  770  QNYTIAIEESGKDILFLHNIISGAADRSYGLHVAALAGLPASVINRAEQILLKFEK  825


>gi|47095354|ref|ZP_00232964.1|  DNA mismatch repair protein MutS [Listeria monocytogenes str. 
1/2a F6854]
Length=860

 Score =  275 bits (703),  Expect = 5e-72
 Identities = 203/667 (30%), Positives = 340/667 (50%), Gaps = 39/667 (5%)

Query  265  VAVSSLSAVIKFLELLSDDS--NFGQFELTT-FDFSQYMKLDIAAVRALNLFQGSVEDTT  321
            +++S   A+ K L  L +    + G  +    ++ S YMK+D  + R L L   S+    
Sbjct  216  MSLSEKRAIGKLLHYLKETQKRDLGHLQQAVHYETSNYMKMDYYSKRNLELAD-SIRGKG  274

Query  322  GSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLL  381
               +L  LL+  +T  G R++ QWI +PL+D+N+I ER N V   + +   R  L E+L 
Sbjct  275  RQGTLLWLLDNTQTAMGGRMLKQWIDRPLIDRNKIIERQNDVSELMANFFERLELVENLK  334

Query  382  RRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVFVTPLT  441
              + DL RLA +      N +D  +L   + Q+P +           +  LL++    LT
Sbjct  335  NVY-DLERLAGRVAYGNVNARDLIQLRNSLYQIPRI-----------RATLLSMNSKSLT  382

Query  442  DLRSDFSKFQEMIE----TTLDMDQVENHEF-LVKPSFDPNLSELREIMNDLEKKMQSTL  496
            +L +     +E+ E      +D   +   E  ++K  ++  L   R+   +  K   + L
Sbjct  383  ELANQLDPCEELTEKLEEAIMDSAPISIREGGIIKDGYNSQLDTYRDASRN-GKTWIAEL  441

Query  497  ISAARDL-GLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSK  555
                R+L G+   K +K+  +  FGYY  VT     +L   + +       N  ++   +
Sbjct  442  ERKERELTGI---KTMKVGFNRVFGYYIEVTRANTHLLPEGR-YERKQTLTNAERYITPE  497

Query  556  LTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGA  615
            L    +     + +  E +  +  E+  +   Y+E +Q L   ++++D + SFA +S   
Sbjct  498  LKEKEKLILDAEEKSMELEYQLFTEVRELVKDYIERLQKLAKSVSEIDCLQSFADISEKN  557

Query  616  PVPYVRPAILEKGQGRIILKASRHACVE-VQDEIAFIPNDVYFEKDKQMFHIITGPNMGG  674
               ++RP + E G   + +K  RH  VE V    +++ ND   ++++++  +ITGPNM G
Sbjct  558  H--FIRPTLSEDGS--LHVKQGRHPVVEKVMGAQSYVANDCDLDRNREIL-LITGPNMSG  612

Query  675  KSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETAS  734
            KSTY+RQ  +  + AQ+GCFVP E A + I D I  R+GA D  + G STFM EMLE  +
Sbjct  613  KSTYMRQVALTAICAQVGCFVPAEEATLPIFDQIFTRIGAADDLIAGQSTFMVEMLEARN  672

Query  735  ILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQI  794
             +  ATKDSLI+ DE+GRGT+TYDG  LA AI EYI   + A  +F+TH+HELT L  ++
Sbjct  673  AIVHATKDSLILFDEIGRGTATYDGMALAQAIIEYIHENVHAKTLFSTHYHELTDLEKEL  732

Query  795  PTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELE--  852
              + N+HV+A+     +  L+++K+G  D+S+GIHVAELA  PK +IE A +   +LE  
Sbjct  733  HGLQNIHVSAVEENGKVVFLHKIKEGPADKSYGIHVAELAELPKSLIERASRILEQLEND  792

Query  853  --EFQYIGESQGYDIMEPAAKKCYLEREQGEKIIQE--FLSKVKQMPFTEMSEENITIKL  908
              +     + Q  +I E      +    + +   +E   L ++  M   +M+  +   KL
Sbjct  793  DKKIVITNDKQPEEIHEEVQLSMFPVEPEKKASSKETKLLKEIASMNIMQMTPMDAMNKL  852

Query  909  KQLKAEV  915
             +L++++
Sbjct  853  YELQSKI  859


>gi|67931584|ref|ZP_00524743.1|  MutS 1 protein [Solibacter usitatus Ellin6076]
Length=869

 Score =  275 bits (703),  Expect = 5e-72
 Identities = 243/858 (28%), Positives = 397/858 (46%), Gaps = 69/858 (8%)

Query  13   SAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMGPAGA  72
            S A    +R +  + E+    + +F  GDFY    EDA+ AARE+  T      +     
Sbjct  2    SDASTPLMRQYNSIKEQVPNALLMFRLGDFYELFFEDAVTAARELEIT------LTARNK  55

Query  73   KNLQSVVLSKMNF---ESFVKDLLLVRQYRVEVYKNRAGNKASKEN-DWYLAYKASPGNL  128
            +   ++ +  + +   E ++  L+  + +RV +       K +K+     +    +PG  
Sbjct  56   EKGNAIPMCGVPYHAAEGYISRLIQ-KGFRVAICDQVEDAKLAKKLVRREITRVVTPGTA  114

Query  129  SQFEDILFGNNDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLE  188
                 +    N+  A++G  G + +         V +VD    +  + E    +    LE
Sbjct  115  MDSNLVRSRENNFLAAVGRSGSRSA---------VAHVDVSTGEFRVTEMEPEEVAGALE  165

Query  189  ALLIQIGPKECVLPGGETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLKGK  248
             L    G +E + PG     D+  L     R G+     +  D+     Y D  R L+  
Sbjct  166  HL----GAREVLFPG-----DLPLLTGE-DRSGLRFVRTELEDWVFTHDYSD--RTLRDH  213

Query  249  -KGEQMNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAV  307
             K   ++   L       A+ +  A++ +L      +       T +D +  M LD   V
Sbjct  214  FKLLSLDGCGLAN--RAAAIGAAGAILHYLRDTQRAALDHLDRPTYYDRADSMVLDSVTV  271

Query  308  RALNLFQGSVEDTTGS----QSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLV  363
            R L L +       G      ++  +L++  T  G RL+ Q + +P M++  IE+RL+ V
Sbjct  272  RNLELIEPLFAADAGGIHAQPTVLGVLDQTLTGMGGRLLRQRLLRPSMNRAEIEQRLDAV  331

Query  364  EAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEK  423
                +   LR  L++ L     DL RL  K    +A  +D   L + + ++P    AL++
Sbjct  332  GELQQQTILRAELRKQL-SGILDLERLLAKVTLGSAGPRDVLALGRSLEKIP----ALKR  386

Query  424  HEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELRE  483
                 Q   L      L +L    S   + I     ++ V+     ++  F P L ELR+
Sbjct  387  CFDTQQAARLRNLHDRLDELADVASLILDCISDEPPLNLVDGGT--IRAGFHPELDELRD  444

Query  484  IMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVD  543
            +  + ++ +        +  G+     +K+  +  FGYY  +T       R N++ +  D
Sbjct  445  LSQNGKQYIAQIEARERQRTGIG---SLKVRFNNVFGYYIEIT-------RANQHLAPAD  494

Query  544  IQK-----NGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDV  598
             ++     N  +FT  +L     +    + +    +  +  ++   ++ + + ++     
Sbjct  495  YERKQTLANAERFTTPELKDYERKVLDAEDKILTLEKELFSDVRKRAAAHAQRIRAAAAA  554

Query  599  LAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVE---VQDEIAFIPNDV  655
            +A+LD   S A V+  A   Y RP   + G+ RI+  A RH  +E    Q+   FIPND+
Sbjct  555  VAELDVTASLAQVA--AENRYQRPCFSDSGEMRIM--AGRHPVIERLTEQEAGRFIPNDL  610

Query  656  YFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAG  715
            Y      +  IITGPNMGGKSTY+RQ  +I ++AQIG FVP ESA + ++D I  R+GA 
Sbjct  611  YLNDSTDLLAIITGPNMGGKSTYLRQAALIAILAQIGSFVPAESASLPVIDRIFTRIGAS  670

Query  716  DSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIG  775
            D+  +G STFM EM ETA IL +AT  S I++DE+GRGT+TYDG  LAWA+ EYI  +  
Sbjct  671  DNLARGRSTFMVEMTETAVILNTATPRSFIVLDEVGRGTATYDGLALAWAVVEYIHQRTR  730

Query  776  AFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELAN  835
            A  +FATH+HELT LA Q+  V NL V+     + +  L +V+ G  D+S+GI VA LA 
Sbjct  731  AKTLFATHYHELTELAEQLSGVRNLMVSVKEAGDHIIFLRKVEPGKADRSYGIEVARLAG  790

Query  836  FPKHVIECAKQKALELEE  853
             P  VIE A+   L+L E
Sbjct  791  LPISVIERARD-VLKLHE  807


>gi|24380425|ref|NP_722380.1|  DNA mismatch repair protein [Streptococcus mutans UA159]
Length=849

 Score =  275 bits (702),  Expect = 7e-72
 Identities = 203/687 (29%), Positives = 343/687 (49%), Gaps = 41/687 (5%)

Query  239  QDLNRLLKGKKGEQMNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQ  298
            + +N LL  +K    +  +L +    + +++   +++++            +L  ++   
Sbjct  189  KQMNLLLSFEKTVYDDVHLLDDQLKAIELAAAGKLLQYVHNTQKRELSHLQKLVHYEIKD  248

Query  299  YMKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEE  358
            Y+++  A   +L+L + +        SL  LL++ KT  G RL+  WI +PL+  + I +
Sbjct  249  YLQMAYATKSSLDLLENARSGKKHG-SLYWLLDETKTAMGTRLLRTWIDRPLVSSSLISK  307

Query  359  RLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVI  418
            R ++++ F++    R  L  D L+   D+ RLA +     AN +D  +L Q ++Q+P + 
Sbjct  308  RQDIIQTFLDHFFERSDLS-DSLKGVYDIERLASRVSFGKANPKDLLQLGQTLSQVPVIK  366

Query  419  QALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQ--VENHEFLVKPSFDP  476
              LE       + L+    T          + + +I + +D +         +++  FD 
Sbjct  367  TILESFASSSLESLINQIDT--------LPELEALIRSAIDSNAPITITEGGMIREGFDE  418

Query  477  NLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNN  536
             L + R +M +    +        +  G+     +K+D + + GYYF VT         N
Sbjct  419  TLDKYRTVMREGTSWIADIETKERQKSGIST---LKIDYNKKDGYYFHVT---------N  466

Query  537  KNFSTVD-------IQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYV  589
             N S V          KN  +F  ++L  +  E  + + E    +  I   I +    Y+
Sbjct  467  SNLSLVPDYFFRKATLKNSERFGTAELAKIEGEMLEAREESANLEYDIFMRIRSQVESYI  526

Query  590  EPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVE-VQDEI  648
            E +Q L   LA +D + S A V+      YVRP+     Q  I ++  RHA VE V    
Sbjct  527  ERLQNLAKSLATVDVLQSLAVVAENNH--YVRPSF--NHQQEISIENGRHAVVEKVMGSQ  582

Query  649  AFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCI  708
             +IPN + F++ K    +ITGPNM GKSTY+RQ  + V+MAQ+G FV  +SA++ I D I
Sbjct  583  EYIPNTINFDQ-KTSIQLITGPNMSGKSTYMRQLALTVIMAQLGSFVAADSADLPIFDAI  641

Query  709  LARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISE  768
              R+GA D  + G STFM EM+E    +++AT +SLI+ DELGRGT+TYDG  LA AI E
Sbjct  642  FTRIGAADDLISGQSTFMVEMMEANHAIKAATPNSLILFDELGRGTATYDGMALAQAIIE  701

Query  769  YIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGI  828
            YI  K+GA  +FATH+HELT L+ ++ ++ N+HV  L  +  +T L+++  G  D+S+GI
Sbjct  702  YIHNKVGAKTLFATHYHELTDLSTRLTSLVNVHVATLEKDGEVTFLHKIADGPADKSYGI  761

Query  829  HVAELANFPKHVIECAKQKALELEEFQ-YIGESQGYDIMEPAAKKCYLEREQGEKIIQEF  887
            HVA++A  PK ++  A    ++LE+    +  +   +  E    +  L     +   +E 
Sbjct  762  HVAKIAGLPKDLLNRADHILVDLEKMSAAVSVNLKNETKESQPVEEQLSLFAIDNNYEEL  821

Query  888  LSKVKQMPFTEMSEE---NITIKLKQL  911
            + K+KQ+  T ++     N    LK+L
Sbjct  822  IKKLKQLDLTNLTPRESMNALFDLKEL  848


>gi|52080310|ref|YP_079101.1|  DNA mismatch repair protein [Bacillus licheniformis ATCC 14580]
Length=869

 Score =  274 bits (701),  Expect = 9e-72
 Identities = 227/818 (27%), Positives = 385/818 (47%), Gaps = 59/818 (7%)

Query  37   FDRGDFYTAHGEDALLAAREVFKTQGVIKYMGPAGAKNLQSVVLSKMNFESFVKDLLLVR  96
            F  GDFY    EDA  A++E+  T   +       ++ +    +   +  S+++ L+  +
Sbjct  25   FRLGDFYEMFFEDAKKASQELEIT---LTSRDGGSSERIPMCGVPYHSCSSYIEQLIK-K  80

Query  97   QYRVEVYKNRAGNKASKEN-DWYLAYKASPGNLSQFEDILFGNNDMSASIGVVGVKMSAV  155
             Y+V + +     K++K      +    +PG +   + I    N+  AS+          
Sbjct  81   GYKVAICEQVEDPKSAKGVVKREVVQLITPGTVMDGKGIHENENNFIASVSKFQHTYGLA  140

Query  156  DGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQ  215
                  G   V +I+R              ++ + +  +G +E V+       D+  L++
Sbjct  141  FSDLTTGENLVTAIER------------LDDVVSEIYSVGAREIVVSRNLDEKDVAMLKE  188

Query  216  IIQRGGILITERKKADFSTKDIYQDLNRLLKGKKGEQMNSAVLPEMENQVAVSSLSAVIK  275
              + G  +  E ++AD        ++  ++ G   +++             V +   +  
Sbjct  189  --RCGATISFEDEQAD--------EVPGIVNGLGSKEL-------------VDTFMRLYV  225

Query  276  FLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKT  335
            +L+     S      +  ++  + MK+D+ + R L L + ++       SL  LL++ KT
Sbjct  226  YLKRTQKRSLDHLQNVQAYELEEAMKIDLYSKRNLELTE-TIRSKNKKGSLLWLLDETKT  284

Query  336  PQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQ  395
              G RL+ QWI +PL+ K +IEER  +VE  +     R+ L+E L   + DL RLA +  
Sbjct  285  AMGGRLLKQWIDRPLIRKGQIEERQEIVETLIAHLFEREDLRERLKEVY-DLERLAGRVA  343

Query  396  RQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIE  455
                N +D  +L + + Q+P + Q +   +    K   A  + P  DL    +  ++ + 
Sbjct  344  YGNVNARDLIQLKESLKQVPAIKQLVGSLDHPKAKAR-AEKIDPCGDL---LNLLEDALY  399

Query  456  TTLDMDQVENHEFLVKPSFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDS  515
                +   E +  L+K  +   L E R+   + +  +           G+   + +K+  
Sbjct  400  ENPPLSLKEGN--LIKDGYHAKLDEYRDASKNGKDWIARLEQQEREYTGI---RSLKVGF  454

Query  516  SAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQD  575
            +  FGYY  VT     +L   + +       N  ++   +L        + +    E + 
Sbjct  455  NKVFGYYIEVTKANIHLLEEGR-YERKQTLTNAERYITPELKEKEALILEAENNICELEY  513

Query  576  AIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILK  635
             +  E+ +    Y+  +Q L  ++++LD +  FA +S      YV+P   E     + + 
Sbjct  514  ELFSELRSKVKEYIPRLQQLGKMMSELDVLQCFATISENRH--YVKP---EFSDDVVQVI  568

Query  636  ASRHACVE-VQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCF  694
              RH  VE V D  +++PN     K +QM  +ITGPNM GKSTY+RQ  +I ++AQIGCF
Sbjct  569  DGRHPVVEKVMDSQSYVPNSCEMGKGRQML-LITGPNMSGKSTYMRQMALISILAQIGCF  627

Query  695  VPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGT  754
            VP + A + I D I  R+GA D  + G STFM EMLE  + +  ATK+SLI+ DE+GRGT
Sbjct  628  VPAKKAVLPIFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIVHATKNSLILFDEIGRGT  687

Query  755  STYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltML  814
            STYDG  LA AI EY+   IGA  +F+TH+HELT+L  ++  + N+HV A   E  +  L
Sbjct  688  STYDGMALAQAIIEYVHEHIGAKTLFSTHYHELTSLEEKLDDLKNVHVRAEEYEGKVVFL  747

Query  815  YQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELE  852
            +Q+K+G  D+S+GIHVA+LA  P  +I  AK    ELE
Sbjct  748  HQIKEGAADKSYGIHVAQLAELPDGLISRAKTILKELE  785


>gi|15892324|ref|NP_360038.1|  DNA mismatch repair protein [Rickettsia conorii str. Malish 7]
Length=890

 Score =  274 bits (701),  Expect = 9e-72
 Identities = 228/836 (27%), Positives = 403/836 (48%), Gaps = 63/836 (7%)

Query  36   LFDRGDFYTAHGEDALLAAREVFKTQGV-IKYMGPAGAKNLQSVVLSKMNFESFVKDLLL  94
            LF  GDFY    EDA+LA+  +    G+ +   G  G + +    +     E+++  L+ 
Sbjct  39   LFRMGDFYEMFYEDAILASNVL----GIALTKRGKNGEEEIAMCGVPYHALENYLTKLIE  94

Query  95   VRQYRV---------EVYKNRAGNKASKENDWYLAYKASPGNLSQFEDILFGNNDMSASI  145
               Y+V         E  KNR G KA    D  +    +PG + +   I     +  AS+
Sbjct  95   AN-YKVAICDQLETPEEAKNRGGYKAVVTRD--VTRIITPGTIIEENLIASAEPNYLASL  151

Query  146  GVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKECVLPGGE  205
             +   K +A        + YVD    ++ +   P+ +  + L  L     P+E +L    
Sbjct  152  VIPKNKETA-------SLCYVDLSTSEIVVVNVPETEILNELARLK----PREILLSENL  200

Query  206  TAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLKGKKGEQMNSAVLPEMENQV  265
             + ++     I ++    IT +  + F+     + +    K K  + +          ++
Sbjct  201  RSSNLAD--SIFKQLNFRITYQVDSFFAINKCEKIILDFYKMKDIKGIG---------EI  249

Query  266  AVSSLSAVIKFLELLS--DDSNFGQFELTTF-DFSQYMKLDIAAVRALNLFQGSVEDTTG  322
            + S + A+   LE LS     N     +     F  YM +D +  R L +   S   + G
Sbjct  250  SSSQICAIGSVLEYLSLTQKQNIPHLPIPRIIKFHSYMTIDFSTRRNLEIVTNSQGGSQG  309

Query  323  SQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLLR  382
            S  L + LN   T QG RL+  ++  PL +  +I  RLN+ E F  + E+ + ++E LL+
Sbjct  310  S--LLSTLNHTVTKQGGRLLYNFLSSPLTNIAKINHRLNITEFFYSNLEIVKKIRE-LLK  366

Query  383  RFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVFVTPLTD  442
            +  D+ R   +     ++ +D   +   +     +        G +    +   + PL  
Sbjct  367  KTSDIERCLTRITMNRSSGRDLLSIKYTLETATIIKGVFFDAYGFNLPDFIEKIIKPL--  424

Query  443  LRSDFSKFQEMIETTLDMDQVENHEF--LVKPSFDPNLSELREIMNDLEKKMQSTLISAA  500
              S  ++   +I+ T+  D   N     ++K  + P +++L +++N+ +  ++       
Sbjct  425  --SGDAELYNLIDETIREDAPNNLNDGGIIKHEYHPKVAQLHDLINNGKLYIEKLKDQYR  482

Query  501  RDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLn  560
            ++ G+D    +K+  +   G +  +T K    + + K F       N V++T ++L  L 
Sbjct  483  KETGID---SLKISHNNVIGLFIDITAKNVNKILDPK-FIHRQTTVNHVRYTTAELQKLE  538

Query  561  eeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYV  620
             E    KT     +  +  +I +        ++ L   L+ LD   +FA++++     YV
Sbjct  539  SELVNAKTLVISLEKELYADICSQVIEKASYLRMLASSLSGLDVFCNFAYIAD--EYDYV  596

Query  621  RPAILEKGQGRIILKASRHACVEV---QDEIAFIPNDVYFEKDKQMFHIITGPNMGGKST  677
            +P   +     I+    RH  VE    ++  +F+ ND +  + ++++ +ITGPNM GKST
Sbjct  597  KPEFTDDLSFDIV--KGRHPVVEKALQRESKSFVYNDCHLSELERIW-LITGPNMAGKST  653

Query  678  YIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILR  737
            ++RQ  +I ++AQIG FVP +SA++ +VD I +R+GA D  +KG STFMAEMLET++IL 
Sbjct  654  FLRQNAIIAIIAQIGSFVPAKSAKIGVVDKIFSRIGAADDLIKGQSTFMAEMLETSAILA  713

Query  738  SATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPTV  797
             +TK+SLII+DE+GRGTSTYDG  +AW++ EYI  K+   C+FATH+HELT ++N +P +
Sbjct  714  QSTKNSLIILDEVGRGTSTYDGVSIAWSVLEYIHDKLKCRCLFATHYHELTVMSNFLPAL  773

Query  798  NNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEE  853
             N  +    + + +  L+ +  G  D+S+G+HVA LA  P  VI  A+Q  L+ E+
Sbjct  774  QNYTIAIEESGKDILFLHNIISGAADRSYGLHVAALAGLPASVINRAEQILLKFEK  829


>gi|57234006|ref|YP_181932.1|  DNA mismatch repair protein [Dehalococcoides ethenogenes 195]
Length=858

 Score =  274 bits (701),  Expect = 9e-72
 Identities = 234/824 (28%), Positives = 391/824 (47%), Gaps = 58/824 (7%)

Query  37   FDRGDFYTAHGEDALLAAREVFKTQGVIKYMGPAGAKNLQSVVLSKMNFESFVKDL--LL  94
            F  GDFY    EDA +AARE+      I        K L+ V L+ + + +    L  L+
Sbjct  25   FRLGDFYETFEEDARIAAREL-----EIVLTSREMGKGLK-VPLAGIPYHALDNYLSRLI  78

Query  95   VRQYRVEVYKNRAGNKASKEN-DWYLAYKASPGNLSQFEDILFGNNDMSASIGVVGVKMS  153
             R Y+V + +       +K      +    +PG + +   +    N+   S+ +      
Sbjct  79   NRGYKVAICEQVTKPGETKGLVKRQVTRLVTPGTVVEPNLLDSKQNNFLLSLYLT-----  133

Query  154  AVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKECVLPGGETAGDMGKL  213
                +   G+ + D    + G  +   N     LEA + ++ P E +LP  ++      L
Sbjct  134  ----EDSCGLAFADISTSEFGCTQLDIN----GLEAEINRLNPAEIILPKSQSLNLPLHL  185

Query  214  RQIIQRGGILITERKKADFSTKDIYQDLNRLLKGKKGEQMNSAVLPEMENQVAVSSLSAV  273
            +  I +            +   D+ ++  RLLK  + + +++     +   +AVS+  A+
Sbjct  186  KATISK--------LDGYYFEADVARE--RLLKHFECQNLSAYGCENLP--LAVSAAGAL  233

Query  274  IKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKC  333
            + +LE     S      L  +  S YM++D   +  L +F+ S  ++    SL  +L++ 
Sbjct  234  LNYLEETQKSSLKQLERLAAYTISDYMQIDSHTLSNLEIFRSSGGNSLKG-SLLGVLDQT  292

Query  334  KTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKK  393
            KT  G RL+ +++ QPL+ +  IE+RL+ V+ F E++  R +L +  L +  D+ R+A +
Sbjct  293  KTAMGGRLLRKFLGQPLLRQEDIEKRLSAVDYFFEESLARASLAK-ALGQIADMERIANR  351

Query  394  FQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEM  453
             +++    ++   L   +      + A+ +  G      LA F+  L  L        E 
Sbjct  352  IRQKTILPKELISLKNSLE----TVSAIHRQFGLMPPPRLAYFLNGLKPLPEMLDIVNEA  407

Query  454  IETTLDMDQVENHEFLVKPSFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKL  513
            I    D         +++  F+P + +L  +  D    +           G+   K +KL
Sbjct  408  IND--DPPSTLGEGKVIRSGFNPEMDKLCSLAGDARTFLSQMEAREREQTGI---KSLKL  462

Query  514  DSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeA  573
              +  FGYY  V+     +    +N+       N  +F   +L          K    E 
Sbjct  463  GYNRVFGYYIEVS--NANLADIPQNYIRKQTLVNAERFITPELKEYENLILNAKERLLEM  520

Query  574  QDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVS--NGAPVPYVRPAILEKGQGR  631
            +  + ++++N   G+   + +    LA LD + +FA V+  NG    YVRP  L   +  
Sbjct  521  ETGLYEQVLNQLGGFYSALLSNAAALASLDVLSAFAEVAVRNG----YVRP--LFHSENS  574

Query  632  IILKASRHACVEVQDEI-AFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQ  690
            +++   RH  VE      +F  ND+    +     I+TGPNM GKSTY++QT +IVLMAQ
Sbjct  575  LVIHRGRHPMVEQGLGYGSFAANDISLSAEDCQIIILTGPNMAGKSTYLKQTALIVLMAQ  634

Query  691  IGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDEL  750
            IG +VP E+AE+ + D I +R+GA +    G STFM EM+ETASIL +AT  SL+I+DE+
Sbjct  635  IGSYVPAETAELCLTDRIFSRIGAREDLSAGQSTFMVEMVETASILNTATSRSLLILDEI  694

Query  751  GRGTSTYDGFGLAWAISEYIATK--IGAFCMFATHFHELTALANQIPTVNNLHVtaltte  808
            GRGTSTYDG  +A A+ EYI ++  + A  +FATH+HEL  LAN +P V N ++      
Sbjct  695  GRGTSTYDGLAIAQAVVEYIHSQPSLHAKTLFATHYHELVELANYLPRVKNYNIAVSEDR  754

Query  809  etltMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELE  852
              +  L+++  G  D+S+GIHVA+LA  P  VI+ A +   ELE
Sbjct  755  GEVVFLHRIVPGGVDKSYGIHVAKLAGLPGWVIKRAYEVLTELE  798


>gi|33152989|ref|NP_874342.1|  DNA mismatch repair protein [Haemophilus ducreyi 35000HP]
Length=866

 Score =  274 bits (701),  Expect = 9e-72
 Identities = 185/561 (32%), Positives = 302/561 (53%), Gaps = 27/561 (4%)

Query  297  SQYMKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRI  356
            S+ + LD A  R L L Q     T  +  LA++L+KC TP G RL+ +WI QP+   + +
Sbjct  262  SEMVLLDAATRRNLELTQNLAGGTEAT--LASVLDKCVTPMGSRLLKRWIHQPIRQLDIL  319

Query  357  EERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPN  416
            + R +++ A ++  E  + LQ  LLR   D+ R+  +   ++A  +D  RL   + QLP 
Sbjct  320  KSRQDMI-ATLQQYEQIEPLQP-LLRNVGDMERILARIALRSARPRDLTRLRTALAQLPL  377

Query  417  VIQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTL--DMDQVENHEFLVKPSF  474
            + +  +          L   +  L    +DFS+   ++E  +     Q+     ++   +
Sbjct  378  IAKCTQN---------LGACLAVLLSKNADFSELYTLLEQAIIETPPQLIRDGGVIAEGY  428

Query  475  DPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLR  534
               L E R +     + + +  I      G+D    +K+  +A  GYY +++  + +  +
Sbjct  429  HAELDEWRTLSAGATQYLDNLEIRERESTGIDT---LKIGFNAVQGYYIQIS--QAQAHK  483

Query  535  NNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQT  594
               ++      KN  ++   +L +  ++  K K      +  + +++ ++   ++  +Q 
Sbjct  484  APIHYVRRQTLKNAERYIIPELKTYEDKVLKAKGAALALEKQLYEQLFDLIMPHLGALQQ  543

Query  595  LNDVLAQLDAVVSFAHVSNGAPVPYVRPAI-LEKGQGRIILKASRHACVEVQDEIAFIPN  653
                L++LD +V+ A  +    + YVRP+  L++G   I +KA RH  VE      FI N
Sbjct  544  TAMALSELDVLVNLAERAES--LHYVRPSFSLQRG---INIKAGRHPVVEHVMVEPFIAN  598

Query  654  DVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVG  713
             V+    + +  I+TGPNMGGKSTY+RQT +I LMA IG FVP ESAE+ ++D I  R+G
Sbjct  599  TVFLNSQRHLL-IVTGPNMGGKSTYMRQTALICLMAYIGSFVPAESAEIGVIDRIFTRIG  657

Query  714  AGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATK  773
            A D    G STFM EM E A+IL  AT  S+++IDE+GRGTSTYDG  LA A +E++A K
Sbjct  658  ASDDLASGRSTFMVEMTEMANILHQATAQSVVLIDEIGRGTSTYDGLALACACAEWLANK  717

Query  774  IGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAEL  833
              +  +FATH+ ELT+L +Q+  V N+H+ A    +T+  ++ V++G   +S+G+ VA L
Sbjct  718  TQSLTLFATHYFELTSLPSQLKGVANVHLDACEYNDTIAFMHSVQEGAASKSYGLAVAAL  777

Query  834  ANFPKHVIECAKQKALELEEF  854
            A  PK VI  AKQ+ + LEEF
Sbjct  778  AGVPKQVIALAKQRLVHLEEF  798


>gi|28899326|ref|NP_798931.1|  DNA mismatch repair protein [Vibrio parahaemolyticus RIMD 2210633]
Length=853

 Score =  274 bits (701),  Expect = 9e-72
 Identities = 183/581 (31%), Positives = 314/581 (54%), Gaps = 45/581 (7%)

Query  293  TFDFSQY-MKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLM  351
            TFD   + + LD A  R L + Q     T    +LAA+L+ C TP G R++ +W+ QP+ 
Sbjct  256  TFDRQDHSVILDAATRRNLEITQNLAGGT--DNTLAAVLDHCSTPMGSRMLKRWLHQPMR  313

Query  352  DKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGI  411
              + +  RL+ +   ++D  L   LQ  L ++  D+ R+  +   ++A  +D  RL   +
Sbjct  314  CIDTLNNRLDAIGE-IKDQGLFTDLQPTL-KQIGDIERILARLALRSARPRDMARLRHAM  371

Query  412  NQLPNVIQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQ--VENHEFL  469
             QLP  +++L         + LA +  P+ ++        E++E  +  +   V     +
Sbjct  372  QQLPE-LESLTASLTHPYLVKLAQYAAPIDEVC-------ELLERAIKENPPVVIRDGGV  423

Query  470  VKPSFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKE  529
            +   ++  L E R++ +   + ++          G+D    +K+  +A  G++ +V+  +
Sbjct  424  IAEGYNEELDEWRKLADGATEYLEKLEADERERHGIDT---LKVGYNAVHGFFIQVSRGQ  480

Query  530  E----------KVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVK  579
                       + L+N + +   +++++  K  NSK  +L              +  + +
Sbjct  481  SHLVPPHYVRRQTLKNAERYIIPELKEHEDKVLNSKSKALAL------------EKKLWE  528

Query  580  EIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRH  639
            E+ ++   ++E MQ L   ++Q+D + + A  ++   + Y RP +++     I ++A RH
Sbjct  529  ELFDLLMPHLEQMQNLASAVSQMDVLQNLAERADS--LDYCRPTLVK--DAGIHIQAGRH  584

Query  640  ACVEVQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCES  699
              VE      FI N +     ++M  IITGPNMGGKSTY+RQT +I LMA IG +VP ES
Sbjct  585  PVVEQVTSDPFIANPIELSPSRKML-IITGPNMGGKSTYMRQTALIALMAHIGSYVPAES  643

Query  700  AEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDG  759
            A++  +D I  R+GA D    G STFM EM ETA+IL +ATK+SL+++DE+GRGTSTYDG
Sbjct  644  AQIGSLDRIFTRIGASDDLASGRSTFMVEMTETANILHNATKNSLVLMDEIGRGTSTYDG  703

Query  760  FGLAWAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKK  819
              LAWA +E++AT+IGA  +FATH+ ELT L N +P + N+H+ A+   +++  ++ V++
Sbjct  704  LSLAWASAEWLATQIGAMTLFATHYFELTELPNLLPNLANVHLDAVEHGDSIAFMHAVQE  763

Query  820  GVCDQSFGIHVAELANFPKHVIECAKQKALELEEFQYIGES  860
            G   +S+G+ VA LA  PK VI+ A+ K  +LE+     +S
Sbjct  764  GAASKSYGLAVAGLAGVPKTVIKNARTKLSQLEQLGQASDS  804


>gi|73748908|ref|YP_308147.1|  DNA mismatch repair protein [Dehalococcoides sp. CBDB1]
Length=858

 Score =  274 bits (700),  Expect = 1e-71
 Identities = 234/841 (27%), Positives = 390/841 (46%), Gaps = 92/841 (10%)

Query  37   FDRGDFYTAHGEDALLAAREVFKTQGVIKYMGPAGAKNLQSVVLSKMNFESFVKDLLLVR  96
            F  GDFY    EDA +AARE                  L+ V+ S+   +     L  + 
Sbjct  25   FRLGDFYETFEEDARIAARE------------------LEIVLTSREMGKGLKVPLAGIP  66

Query  97   QYRVEVYKNRAGNKASKENDWYLAYK---------------ASPGNLSQFEDILFGNNDM  141
             + ++ Y +R  NK  K        K                +PG + +   +    N+ 
Sbjct  67   YHALDNYLSRLINKGYKVAICEQVTKPGETKGLVQRQVTRLVTPGTVVEPNLLQTKQNNF  126

Query  142  SASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKECVL  201
              S+ +          +   G+ + D    + G  +       S LEA + ++ P E +L
Sbjct  127  LLSLYLT---------EDSCGLAFADISTSEFGCTQ----TNISELEAEISRLSPAEIIL  173

Query  202  PGGETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLKGKKGEQMNSAVLPEM  261
            P  ++      L+  I +            +   DI ++  RLL+  + + +++     M
Sbjct  174  PKNQSLNLPIHLKATISK--------LDGYYFEADIARE--RLLRHFECQNLSAYGCENM  223

Query  262  ENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLFQGSVEDTT  321
               +A+S+  A++ +LE     S      L+ +  + YM++D   +  L +F+ S  ++ 
Sbjct  224  P--LAISAAGALLNYLEETQKSSLKQLERLSVYTTADYMQMDSHTLSNLEIFRSSGGNSL  281

Query  322  GSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLL  381
               SL  +L++ KT  G RL+ +++ QPL+ ++ IE+RL+ V+ F E++  R +L + L 
Sbjct  282  KG-SLLGILDQTKTAMGGRLLRKFLGQPLLKQSDIEKRLSAVDYFFEESLARTSLAKSL-  339

Query  382  RRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVFVTPLT  441
             +  D+ R+A + +++    ++   L   +      + A+ +  G      LA F+  L 
Sbjct  340  GQIADMERMANRIRQKTILPRELISLKNSLE----TVSAIHRQFGLMPPPRLAYFLNGLK  395

Query  442  DLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIMNDLEKKMQSTLISAAR  501
             L        + I  T D         +++  FDP + +L  +  D    +         
Sbjct  396  PLPEMLDIINKTI--TDDPPSTLGDGKVIRAGFDPEMDKLCSLAGDARTFLSQMETRERE  453

Query  502  DLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVD---IQK----NGVKFTNS  554
              G+   K +KL  +  FGYY  ++         N N   V    I+K    N  +F   
Sbjct  454  RTGI---KSLKLGYNRVFGYYIEIS---------NANLGDVPPEFIRKQTLVNAERFITP  501

Query  555  KLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNG  614
            +L          K    E +  + ++++N   G+   +      LA LD + +FA V+  
Sbjct  502  ELKEYENLILNAKERLLEMETGLYEQVLNQLGGFYSALLANATALAALDVLSAFAEVA--  559

Query  615  APVPYVRPAILEKGQGRIILKASRHACVEVQDEI-AFIPNDVYFEKDKQMFHIITGPNMG  673
                YVRP      + R+ ++  RH  VE      +F+ ND+    +     I+TGPNM 
Sbjct  560  VRNSYVRPVF--HPENRLDIRKGRHPMVEQGLGYGSFVANDISLSAEDCQIIILTGPNMA  617

Query  674  GKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETA  733
            GKSTY++QT +IVLMAQIG +VP E+AE+ + D I  R+GA +    G STFM EM+ETA
Sbjct  618  GKSTYLKQTALIVLMAQIGSYVPAETAELCLTDRIFTRIGAREDLSAGQSTFMVEMVETA  677

Query  734  SILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATK--IGAFCMFATHFHELTALA  791
            SIL +AT  SL+I+DE+GRGTSTYDG  +A A+ EYI ++  + A  +FATH+HEL  LA
Sbjct  678  SILNTATSRSLLILDEIGRGTSTYDGLAIAQAVVEYIHSQPSLTAKTLFATHYHELVELA  737

Query  792  NQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALEL  851
            + +P V N ++        +  L+++  G  D+S+GIHVA+LA  PK VI+ A +   EL
Sbjct  738  SYLPRVKNYNIAVSEDRGEVVFLHKIVPGGVDKSYGIHVAKLAGLPKWVIKRAYEVLTEL  797

Query  852  E  852
            E
Sbjct  798  E  798


>gi|52785686|ref|YP_091515.1|  DNA mismatch repair protein [Bacillus licheniformis ATCC 14580]
Length=869

 Score =  273 bits (699),  Expect = 1e-71
 Identities = 227/818 (27%), Positives = 385/818 (47%), Gaps = 59/818 (7%)

Query  37   FDRGDFYTAHGEDALLAAREVFKTQGVIKYMGPAGAKNLQSVVLSKMNFESFVKDLLLVR  96
            F  GDFY    EDA  A++E+  T   +       ++ +    +   +  S+++ L+  +
Sbjct  25   FRLGDFYEMFFEDAKKASQELEIT---LTSRDGGSSERIPMCGVPYHSCSSYIEQLIK-K  80

Query  97   QYRVEVYKNRAGNKASKEN-DWYLAYKASPGNLSQFEDILFGNNDMSASIGVVGVKMSAV  155
             Y+V + +     K++K      +    +PG +   + I    N+  AS+          
Sbjct  81   GYKVAICEQVEDPKSAKGVVKREVVQLITPGTVMDGKGIHENENNFIASVSKFQHTYGLA  140

Query  156  DGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQ  215
                  G   V +I+R              ++ + +  +G +E V+       D+  L++
Sbjct  141  FSDLTTGENLVTAIER------------LDDVVSEIYSVGAREIVVSRNLDEKDVAMLKE  188

Query  216  IIQRGGILITERKKADFSTKDIYQDLNRLLKGKKGEQMNSAVLPEMENQVAVSSLSAVIK  275
              + G  +  E ++AD        ++  ++ G   +++             V +   +  
Sbjct  189  --RCGATISFEDEQAD--------EVPGIVNGLGSKEL-------------VDTFMRLYV  225

Query  276  FLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKT  335
            +L+     S      +  ++  + MK+D+ + R L L + ++       SL  LL++ KT
Sbjct  226  YLKRTQKRSLDHLQNVQAYELEEAMKIDLYSKRNLELTE-TIRSKNKKGSLLWLLDETKT  284

Query  336  PQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQ  395
              G RL+ QWI +PL+ K +IEER  +VE  +     R+ L+E L   + DL RLA +  
Sbjct  285  AMGGRLLKQWIDRPLIRKGQIEERQEIVETLIAHLFEREDLRERLKEVY-DLERLAGRVA  343

Query  396  RQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIE  455
                N +D  +L + + Q+P + Q +   +    K   A  + P  DL    +  ++ + 
Sbjct  344  YGNVNARDLIQLKESLKQVPAIKQLVGSLDHPKAKAR-AEKIDPCGDL---LNLLEDALY  399

Query  456  TTLDMDQVENHEFLVKPSFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDS  515
                +   E +  L+K  +   L E R+   + +  +           G+   + +K+  
Sbjct  400  ENPPLSLKEGN--LIKDGYHAKLDEYRDASKNGKDWIARLEQQEREYTGI---RSLKVGF  454

Query  516  SAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQD  575
            +  FGYY  VT     +L   + +       N  ++   +L        + +    E + 
Sbjct  455  NKVFGYYIEVTKANIHLLEEGR-YERKQTLTNAERYITPELKEKEALILEAENNICELEY  513

Query  576  AIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILK  635
             +  E+ +    Y+  +Q L  ++++LD +  FA +S      YV+P   E     + + 
Sbjct  514  ELFSELRSKVKEYIPRLQQLAKMMSELDVLQCFATISENRH--YVKP---EFSDDVVQVI  568

Query  636  ASRHACVE-VQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCF  694
              RH  VE V D  +++PN     K +QM  +ITGPNM GKSTY+RQ  +I ++AQIGCF
Sbjct  569  DGRHPVVEKVMDSQSYVPNSCEMGKGRQML-LITGPNMSGKSTYMRQMALISILAQIGCF  627

Query  695  VPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGT  754
            VP + A + I D I  R+GA D  + G STFM EMLE  + +  ATK+SLI+ DE+GRGT
Sbjct  628  VPAKKAVLPIFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIVHATKNSLILFDEIGRGT  687

Query  755  STYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltML  814
            STYDG  LA AI EY+   IGA  +F+TH+HELT+L  ++  + N+HV A   E  +  L
Sbjct  688  STYDGMALAQAIIEYVHEHIGAKTLFSTHYHELTSLEEKLDDLKNVHVRAEEYEGKVVFL  747

Query  815  YQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELE  852
            +Q+K+G  D+S+GIHVA+LA  P  +I  AK    ELE
Sbjct  748  HQIKEGAADKSYGIHVAQLAELPDGLISRAKTILKELE  785


>gi|56419841|ref|YP_147159.1|  DNA mismatch repair protein [Geobacillus kaustophilus HTA426]
Length=896

 Score =  273 bits (698),  Expect = 2e-71
 Identities = 194/564 (34%), Positives = 286/564 (50%), Gaps = 24/564 (4%)

Query  294  FDFSQYMKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDK  353
            +    YMK+D  +   L L + +V       SL  LL++  T  G RL+ QW+ +PL+D+
Sbjct  240  YQVDHYMKMDRHSKLHLELVE-TVRSKGRKGSLLWLLDETVTAMGGRLLKQWLDRPLIDR  298

Query  354  NRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQ  413
              IE RL+ VE        RQ L+ D LR   D+ RL  +     AN +D  +L + + Q
Sbjct  299  REIERRLDFVETLKTSYFERQELR-DRLRGVYDIERLVGRVSYGNANARDLVQLKKSLLQ  357

Query  414  LPNVIQ---ALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLV  470
            +P + Q   AL   E       L   + P  +L       +  I+    +   E +  L+
Sbjct  358  VPALRQTVGALPLAEADK----LCERLDPCEEL---VDLLERSIQEQPPLSVKEGN--LI  408

Query  471  KPSFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEE  530
            K  +D  L   R+   + +  +           G+   K +K+  +  FGYY  VT K  
Sbjct  409  KDGYDKQLDRYRDASRNGKAWIAELEAKEREATGI---KSLKVGYNRVFGYYIEVT-KPN  464

Query  531  KVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVE  590
              L     +       N  +F   +L        + + +  E +  +   I      Y+ 
Sbjct  465  LPLVPEGRYERKQTLANAERFITPELKEKEALILEAEEKSIELEYELFVAIREQVKQYIP  524

Query  591  PMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVE-VQDEIA  649
             +QTL   +A+LD + SFA +S+     YVRP      +  ++++  RH  VE V     
Sbjct  525  RLQTLAKAIAELDVLQSFATISD--EYRYVRPQF--STERVLVIQGGRHPVVEKVLGAQM  580

Query  650  FIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCIL  709
            ++PND Y  ++++M  +ITGPNM GKSTY+RQ  +  +MAQIGCFVP E A + I D + 
Sbjct  581  YVPNDCYMNREREML-LITGPNMAGKSTYMRQVALTAVMAQIGCFVPAERAVLPIFDQVF  639

Query  710  ARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEY  769
             R+GA D    G STFM EMLE    +  AT++SLI+ DE+GRGTSTYDG  LA AI EY
Sbjct  640  TRIGAADDLSAGQSTFMVEMLEARHAIAHATQNSLILFDEIGRGTSTYDGMALAQAIIEY  699

Query  770  IATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIH  829
            I   IGA  +F+TH+HELTAL   +P ++N+H  A+     +  L+Q+  G  D+S+GIH
Sbjct  700  IHDHIGAKTLFSTHYHELTALERSLPRLSNVHARAIEENGKVVFLHQIADGPADKSYGIH  759

Query  830  VAELANFPKHVIECAKQKALELEE  853
            VAELA  P  +IE A+    ELE+
Sbjct  760  VAELAGLPASLIERARAILAELEK  783


>gi|66827461|ref|XP_647085.1|  DNA mismatch repair protein [Dictyostelium discoideum]
Length=1260

 Score =  273 bits (697),  Expect = 2e-71
 Identities = 244/896 (27%), Positives = 418/896 (46%), Gaps = 106/896 (11%)

Query  19    FVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMGPAGAKNLQSV  78
             F R F  +  K   TV  F +G FY  +  DA +  +++        ++      N++ V
Sbjct  363   FERQFWDIKSKNYDTVVFFKKGKFYELYESDADIGHQQL--------HLKLTDRVNMRMV  414

Query  79    VLSKMNFESFVKDLLLV--RQYRVEVYKNRAGNKASKENDWYLAYKASPGNLSQFEDILF  136
              + +M+F  +   L+ +  +  +V+  +   G  A ++N+     K       +   IL 
Sbjct  415   GVPEMSFNHWASKLIHLGHKVAKVDQMETSIG-MAKRQNEKGGRNKKDSIIQRELTSILT  473

Query  137   GNNDMS-------ASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEA  189
                 +         S  ++ +K +  D  +Q GV +VD    +  LC   D+D     E 
Sbjct  474   AGTLLDEQMITDQTSTYLMAIKENEYD--KQYGVCFVDVSIGEFYLCTIQDDDNRMQFET  531

Query  190   LLIQIGPKECVLPGGETAGD-MGKLRQIIQRGGILITERKKADF-STKDIYQDLNRLLKG  247
             LL+Q+ PKE V   G T+   +  +++++     ++  R   ++    D  + + +L  G
Sbjct  532   LLLQMMPKEIVYEKGATSPKTISIMKRVLSTVKPVMNARLSLEYWDPTDTMERITQLCGG  591

Query  248   KKGEQMNSAVLPEMENQ-VAVSSLSAVIKFL------ELLSDDSNFGQFELTTFDFSQYM  300
             K  E      L +M+N+   + +L   I +L        + + + F +F     D    M
Sbjct  592   KTPE-----TLCQMKNEEYLMGALGGCISYLMDIKIGNSVVEQARFKRFN--PLDIGNSM  644

Query  301   KLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERL  360
              LD   +  L +F  S + +T   +L  L+++C T  G+R+  QWI +PL +KN I +R 
Sbjct  645   ILDGQCLVNLEIFNNSTDGSTEG-TLFKLMDRCTTAFGKRMFRQWICRPLANKNAIVDRQ  703

Query  361   NLVEAFVEDAELRQTLQE--DLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVI  418
               +E F+ D+   +TLQ+   +L + PDL R+  + + Q + + D             +I
Sbjct  704   KAIE-FLRDSP--ETLQKVTAILNKLPDLERMIARIRAQTSKISD-------------LI  747

Query  419   QALEKHEGKHQKLL-LAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHE------FLVK  471
               L   +  H KLL L      +  +      F +  +   D+D+ EN        +   
Sbjct  748   SVLNHFDNIHSKLLELLDEAEQIESIHLRSCLFMDNQQDNDDIDEQENSNNNNNIRYSGY  807

Query  472   PSFDPNLSELREIMNDLEKKM-----------------QSTLISAARDLGLDPG----KQ  510
             P+  P +  +R+     + ++                 QS   S A+ L          +
Sbjct  808   PNLKPYIERVRKSFTIEQDRVVPSKGLFLEFDQCLGNIQSLEQSFAKHLEEQKAHFKCNK  867

Query  511   IKLDSSAQFGYYFRVTCKEEKVLRNNKNF--STVDIQKNGVKFTNSKLTSLneeytknkt  568
             I+     +  Y   +     K L    +   S+  + +    F    LTSL EE    + 
Sbjct  868   IEYKHMGKEIYQIEIPVAFTKKLPAGFSLKSSSSKVNRYHSPFVTKNLTSLLEERDTYEV  927

Query  569   eyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKG  628
                     ++K+I++  + Y    Q     L+QLD ++S   VS  + +   RP  +   
Sbjct  928   L----SKEVLKKILSNFAIYFNHFQIAITKLSQLDCLLSLYKVSFQSSIQMCRPLFVSSD  983

Query  629   Q-GRIILKASRHACVEVQDEIAFIPNDVYF--EKDKQMFHIITGPNMGGKSTYIRQTGVI  685
             Q G I +K  RH C+  +    FIPND+    E +     ++TGPNMGGKST +RQ+ ++
Sbjct  984   QRGFIDVKDMRHPCIYSKSGDDFIPNDISLNTENNPPSLMVLTGPNMGGKSTLLRQSCIL  1043

Query  686   VLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLI  745
             V+MAQ+GC+V   S E+SIVD I  R+GA D+ L G STFM E+ ET+++L+ ATK SL+
Sbjct  1044  VIMAQMGCYVSASSCEMSIVDRIFTRLGANDNILAGQSTFMVELAETSAVLKYATKRSLV  1103

Query  746   IIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPTVNNL-----  800
             I+DELGRGTST+DG+ +A+++  Y+ATK+ + C+FATH+  L       PTV +L     
Sbjct  1104  ILDELGRGTSTFDGYSIAYSVLNYLATKVQSMCIFATHYQSLA----YEPTVRDLISTAY  1159

Query  801   ---HVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEE  853
                HV      + +  LY++  GVC  S+G+HVA +A  P+ +I  A++K+ ++E+
Sbjct  1160  MTCHV--DEEAKKVIFLYKLASGVCPNSYGLHVASMAGLPREIITKAEEKSTQMEK  1213


>gi|53729249|ref|ZP_00133779.2|  COG0249: Mismatch repair ATPase (MutS family) [Actinobacillus 
pleuropneumoniae serovar 1 str. 4074]
Length=864

 Score =  273 bits (697),  Expect = 2e-71
 Identities = 179/560 (31%), Positives = 301/560 (53%), Gaps = 27/560 (4%)

Query  297  SQYMKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRI  356
            S  + LD A  R L L Q     T    +LAA+L+KC TP G RL+ +WI QP+ D  ++
Sbjct  262  SDTILLDAATRRNLELTQNLAGGT--ENTLAAVLDKCVTPMGSRLLKRWIHQPIRDLEKL  319

Query  357  EERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPN  416
            ++R ++++   ++  +     + LL+   D+ R+  +   ++A  +D   L   + QLP+
Sbjct  320  KKRQDIIDTLQKEQRIEPL--QPLLQNVGDMERILARVALRSARPRDLTHLRTALAQLPD  377

Query  417  VIQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTL--DMDQVENHEFLVKPSF  474
            +         K+ K L A     +  +  DFS+   +++  +     Q+     ++   +
Sbjct  378  I--------AKNAKNLTASLDALVAQI-GDFSELHALLKRAIIETPPQLIRDGGVIAEGY  428

Query  475  DPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLR  534
            +  L E RE+     + +++  I      G+D    +K+  +A  GYY +++  + +  +
Sbjct  429  NAELDEWRELSAGATQYLENLEIREREATGIDT---LKIGFNAVHGYYIQIS--QGQAHK  483

Query  535  NNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQT  594
               ++      KN  ++   +L +  ++  K K      +  +  E+ ++    +  MQ 
Sbjct  484  APMHYVRRQTLKNAERYIIPELKTYEDKVLKAKGASLALEKQLYDELFDLLMPRLGEMQL  543

Query  595  LNDVLAQLDAVVSFAHVSNGAPVPYVRPAI-LEKGQGRIILKASRHACVEVQDEIAFIPN  653
                L++LD + + A  +    + YVRP   L++G   + +K  RH  VE   +  FI N
Sbjct  544  AAMALSELDVLTNLAERAES--LNYVRPTFSLQRG---VNIKGGRHPVVEQVLKDPFIAN  598

Query  654  DVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVG  713
             V+    + +  ++TGPNMGGKSTY+RQ  +I LMA IG FVP +SAE+  +D I  R+G
Sbjct  599  PVFLNAQRHLL-VVTGPNMGGKSTYMRQIALISLMAYIGSFVPADSAEIGALDRIFTRIG  657

Query  714  AGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATK  773
            A D    G STFM EM E A+IL  AT+ SL++IDE+GRGTSTYDG  LAWA +E++A K
Sbjct  658  ASDDLASGRSTFMVEMTEMANILHQATEKSLVLIDEIGRGTSTYDGLSLAWACAEWLAKK  717

Query  774  IGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAEL  833
              +  +FATH+ ELT+L +Q+  V N+H+ A   ++++  ++ V++G   +S+G+ VA L
Sbjct  718  TQSLTLFATHYFELTSLPSQLKGVANVHLDAREHQDSIVFMHSVQEGAASKSYGLAVAAL  777

Query  834  ANFPKHVIECAKQKALELEE  853
            A  PK VI+ AKQ+   LEE
Sbjct  778  AGVPKQVIQLAKQRLAHLEE  797


>gi|52698708|ref|ZP_00340116.1|  COG0249: Mismatch repair ATPase (MutS family) [Rickettsia akari 
str. Hartford]
Length=886

 Score =  273 bits (697),  Expect = 2e-71
 Identities = 227/835 (27%), Positives = 403/835 (48%), Gaps = 61/835 (7%)

Query  36   LFDRGDFYTAHGEDALLAAREVFKTQGV-IKYMGPAGAKNLQSVVLSKMNFESFVKDLLL  94
            LF  GDFY    +DA+LA+  +    G+ +   G  G + +    +     E ++  L+ 
Sbjct  35   LFRMGDFYEMFYDDAILASNVL----GIALTKRGKNGEEEIAMCGVPYHALEHYLTKLIE  90

Query  95   VRQYRVEVY---------KNRAGNKASKENDWYLAYKASPGNLSQFEDILFGNNDMSASI  145
               Y+V +          KNR G KA    D  +    +PG + +   I     +  AS+
Sbjct  91   AN-YKVAICDQLETPEDAKNRGGYKAVVTRD--VTRIITPGTIIEENLIASAEPNYLASL  147

Query  146  GVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKECVLPGGE  205
             +   K +A        + YVD    ++ +   P+ +  + L  L     P+E ++    
Sbjct  148  VIPQNKETA-------SICYVDLSTSEIFVVNVPEAEILNELARLK----PREILVSENL  196

Query  206  TAGDMGKLRQIIQRGGILITERKKADFST---KDIYQDLNRLLKGKKGEQMNSAVLPEME  262
             + ++     I ++    IT +  + F+    K I  D  ++   K   +++S+      
Sbjct  197  RSSNLAD--SIFKQLNFRITYQVDSCFAINKCKKIILDFYKMKDIKGIGEISSS------  248

Query  263  NQVAVSSLSAVIKFLELLSDDSNFGQFELTTF-DFSQYMKLDIAAVRALNLFQGSVEDTT  321
             Q+ V  + +++++L L +   N     +    +F  YM +D +    L +   S   + 
Sbjct  249  -QICV--IGSILEYLSL-TQKQNIPHLPIPRIINFHSYMTIDFSTRHNLAIVINSQGSSN  304

Query  322  GSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLL  381
            GS  L   +N   T QG RL+  ++  PL +  +I  RLN+ E F  + E+ Q ++E LL
Sbjct  305  GS--LLNTINHTVTKQGGRLLYNFLSSPLTNIAKINHRLNITEFFYSNLEIVQRIRE-LL  361

Query  382  RRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVFVTPLT  441
            ++  D+ R   +     ++  D   +   +     +        G +    +   + PL 
Sbjct  362  KKTSDIERCLTRITMNRSSGCDLLSIKYTLEAATIIKGVFFDAYGFNLPDFIEKIIKPLA  421

Query  442  DLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIMNDLEKKMQSTLISAAR  501
                 +    E I    D+    N   ++K  + P +++L +++N+ +  ++       +
Sbjct  422  GDAELYHLIDESIRA--DVPNNLNDGGIIKHEYHPKVAQLHDLINNRKLHIEKLKDQYRK  479

Query  502  DLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLne  561
            + G+D    +K+  +   G +  +T K    + + K F       N V++T ++L  L  
Sbjct  480  ETGID---SLKISHNNVIGLFIDITAKNVNKILDPK-FIHRQTTVNNVRYTTTELQKLES  535

Query  562  eytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVR  621
            E    KT     + A+  +I +        ++ L   L+ LD   +FA++++     YV+
Sbjct  536  ELVNAKTLVISLEKALYADICSQVIKKAAYLRMLASSLSVLDVFCNFAYIAD--EYDYVK  593

Query  622  PAILEKGQGRIILKASRHACVEV---QDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTY  678
            P + +     I+    RH  VE    ++  +F+ ND +  + K+++ +ITGPNM GKST+
Sbjct  594  PELTDDLSFDIV--KGRHPVVEKVLQRESKSFVYNDCHLSELKRIW-LITGPNMAGKSTF  650

Query  679  IRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRS  738
            +RQ  +I ++AQIG FVP +SA++ +VD I +R+GA D  +KG STFMAEMLET++IL  
Sbjct  651  LRQNAIIAIIAQIGSFVPAKSAKIGVVDKIFSRIGAADDLIKGQSTFMAEMLETSAILAQ  710

Query  739  ATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPTVN  798
            +TK+SLII+DE+GRGTSTYDG  +AW++ EYI  K+   C+FATH+HELT + N +P + 
Sbjct  711  STKNSLIILDEVGRGTSTYDGVSIAWSVLEYIHDKLKCRCLFATHYHELTVMNNFLPALQ  770

Query  799  NLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEE  853
            N  +    + + +  L+ +  G  D+S+GIHVA LA  P  VI  A+Q  L+ E+
Sbjct  771  NYTIAIEESGKDILFLHNIISGAADRSYGIHVAALAGLPASVINRAEQILLKFEK  825


>gi|56963952|ref|YP_175683.1|  DNA mismatch repair protein [Bacillus clausii KSM-K16]
Length=871

 Score =  272 bits (695),  Expect = 4e-71
 Identities = 190/559 (33%), Positives = 295/559 (52%), Gaps = 28/559 (5%)

Query  299  YMKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEE  358
            Y+K+D+ A R L L Q ++ D   S SL A++++  T  G RL+ QWI++PL+D+  I  
Sbjct  253  YLKMDVHAKRNLELVQ-TLRDKKKSGSLLAVIDQTVTAMGGRLLRQWIERPLVDRKAIAG  311

Query  359  RLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVI  418
            R  +VEAF+E    R+ L+ D LR+  D+ RLA +    + N ++  +L + +  +P + 
Sbjct  312  RQAVVEAFLEHFFEREQLR-DCLRQVYDIERLAARIAYGSVNARELVQLKRSLQNIPEIE  370

Query  419  QALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTL--DMDQVENHEFLVKPSFDP  476
              LE+  G   + L         +    F+    ++E +L  D         L+   ++ 
Sbjct  371  ATLEQ-VGLGGRWL---------NQSEQFADLVALMEQSLVDDPPLSLTEGGLIVDGYNE  420

Query  477  NLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNN  536
             L   R+   + ++ +     S     G+   + +K+  +  FGYY  VT     +L + 
Sbjct  421  ELDAYRDASRNGKQWIAELEQSEREATGI---RSLKVGYNRVFGYYIEVTRANAHLLPDG  477

Query  537  KNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLN  596
            + +       N  ++   +L        +   +  + +  +  +I      YV  +Q L 
Sbjct  478  R-YERKQTLTNAERYITPELKEKEALILEADEKLADLEYRLFADIRKQVEAYVASLQKLA  536

Query  597  DVLAQLDAVVSFAHVS--NGAPVPYVRPAILEKGQGRIILKASRHACVE-VQDEIAFIPN  653
              ++++D +  FA V+  NG    Y +P I E     + +K  RH  VE V    +++ N
Sbjct  537  ADISEMDVLAGFASVAEQNG----YTKPTITESRD--VAIKGGRHPVVETVIKRGSYVEN  590

Query  654  DVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVG  713
            D+    D+ M  +ITGPNMGGKSTY+RQ  + V+MAQIG +VP   A + + D I  R+G
Sbjct  591  DIDLTGDRDML-LITGPNMGGKSTYMRQLALTVVMAQIGSYVPAAEATLPLFDQIFTRIG  649

Query  714  AGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATK  773
            A D    G STFM EMLET   L  AT  SLI++DE+GRGTSTYDG  LA AI EYI   
Sbjct  650  AADDLASGQSTFMVEMLETKDALVKATPHSLILLDEIGRGTSTYDGMALAQAIIEYIYET  709

Query  774  IGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAEL  833
            IGA  +F+TH+HELT LA+ + T+ N+HV+A+    T+  L+QV +G  D+S+G++VAEL
Sbjct  710  IGAKTLFSTHYHELTRLADSLHTLRNVHVSAVEENGTVVFLHQVIEGAADRSYGVYVAEL  769

Query  834  ANFPKHVIECAKQKALELE  852
            A  PK V   A+    ELE
Sbjct  770  AGLPKQVTTRAEALLTELE  788


>gi|68560607|ref|ZP_00599919.1|  MutS 1 protein [Rubrobacter xylanophilus DSM 9941]
Length=1095

 Score =  271 bits (694),  Expect = 6e-71
 Identities = 205/679 (30%), Positives = 328/679 (48%), Gaps = 65/679 (9%)

Query  185   SNLEALLIQIGPKECVLPGGETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRL  244
             + L A L +  P+E V+P    A D+ +L   +        E    + + +  +      
Sbjct  462   AELPAELERWSPREVVVPERTAAEDLPRLEARVSTAPRWTFEPSAGEQALRQHFG-----  516

Query  245   LKGKKGEQMNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQF-ELTTFDFSQYMKLD  303
             +   KG  ++ +  P++     V++  A+I++L  L   S   Q      +D  Q M LD
Sbjct  517   VASLKGYGLDGS--PQL-----VAAAGALIRYLSTLRGGSPPEQIVSFRRYDPGQAMLLD  569

Query  304   IAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLV  363
              A  R L L           + L + +++ +TP GQR + +W+++PL++ +RI +RL  V
Sbjct  570   AATRRNLGL-----------EELISTVDRTRTPMGQRTLRRWLERPLLEASRINQRLEAV  618

Query  364   EAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEK  423
             +A   D  LR+ ++E L    PD+ R+A +  R +A+  D   L   +  L  + +AL  
Sbjct  619   DALFPDYMLREEVREHL-GGIPDIERIATRIVRLSASPGDLLALRGALEALGPLRRALAP  677

Query  424   HEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELRE  483
                + + L  A+          +    +E+I   +  ++ E    +++P +   L E R 
Sbjct  678   AAQRSELLRRAL------SAMEEPPGVRELIAEAISEEEGE----IIRPGYSAELDEARS  727

Query  484   IMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKE----------EKVL  533
               +   + +           GL   K +K+      GY+  V  KE           K L
Sbjct  728   FRDGAHEWLTRFEAEERLKTGL---KTLKVGYRDGEGYFIEVGGKEAHRVPPHYEHRKAL  784

Query  534   RNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQ  593
             ++N  + TV+++++  +   ++             E E  +  I+ EI          +Q
Sbjct  785   KHNARYVTVELKEHESRMLTAR------------EEVERLERRILGEIRAAVKEAAPQLQ  832

Query  594   TLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPN  653
              +   +A +D V SFA  +  A + Y RP + E+   RI+  + RH  VE   E  F+PN
Sbjct  833   RIARAVAVVDVVASFAAAA--AELRYCRPRVAEERGIRIV--SGRHPVVEHATETPFVPN  888

Query  654   DVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVG  713
             D   +   ++  IITGPNM GKS Y+RQ  +IVL+AQ G +VP E A + +VD I  RVG
Sbjct  889   DARIDGGSRL-QIITGPNMAGKSVYLRQVALIVLLAQTGSYVPAEEASLGVVDRIFTRVG  947

Query  714   AGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATK  773
             A D    G STFM EM E A IL  AT+ SL+I+DE+GRGTSTYDG  LAWAI+EY+   
Sbjct  948   AEDRLASGESTFMVEMTEAAGILNGATERSLVILDEVGRGTSTYDGMSLAWAIAEYLHDD  1007

Query  774   IGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAEL  833
             + A  +FATH+HELT LA+ +P   NL          +  L++++ G    S+G+HVA L
Sbjct  1008  VQALTLFATHYHELTRLADSLPGCRNLKAVVEEVGGEIVFLHRIEPGAESSSYGVHVARL  1067

Query  834   ANFPKHVIECAKQKALELE  852
             A  P  V + A++    LE
Sbjct  1068  AGLPPRVTDRAQEILSRLE  1086


>gi|19704028|ref|NP_603590.1|  DNA mismatch repair protein [Fusobacterium nucleatum subsp. nucleatum 
ATCC 25586]
Length=896

 Score =  271 bits (693),  Expect = 7e-71
 Identities = 255/934 (27%), Positives = 439/934 (47%), Gaps = 88/934 (9%)

Query  11   LESAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMGPA  70
            ++ +A+   ++ ++ + E+    + +F  GDFY    EDA +A++E+  T      +   
Sbjct  18   IKMSADTPLMQQYKKIKEEYQNEILMFRLGDFYEMFFEDAKIASKELGLT------LTKR  71

Query  71   GAKNLQSVVLSKMNFESFVKDL--LLVRQYRVEVYKNRAGNK-ASKENDWYLAYKASPGN  127
              +  Q V L+ + + S    +  L+ + Y V +       K A+      +    +PG 
Sbjct  72   NREKGQDVPLAGVPYHSVASYIAKLVEKGYSVAICDQVEDPKSATGIVKREVTRVITPGT  131

Query  128  LSQFEDILFGNNDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNL  187
            +   + +   NN+  A I +          +  V + Y D    +  + E    + F   
Sbjct  132  IIDVDFLDKNNNNYIACIKINTT-------ENIVAIAYTDITTGEFSVFEIKGKNFFEKA  184

Query  188  EALLIQIGPKECVLPGGETAGDMGKLRQIIQRGGILITE----RKKADFSTKDIYQDLNR  243
             A + +I   E +L     +  +  L++ I   G+  TE    RK   + T   Y D+  
Sbjct  185  LAEMNKIQASEILLDEKTYSEYIEILKEKISFLGVKFTEVPNVRKAESYLTS--YFDI--  240

Query  244  LLKGKKGEQMNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLD  303
                     M+  V       +A+S+ + ++ +++ L   +     ++   +    M+L+
Sbjct  241  ---------MSIEVFSLKSKDLAISTSANLLHYIDELQKGNELPFSKIEYKNIDNIMELN  291

Query  304  IAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLV  363
            I+    LNL     E+  G+  L  +L+ C T  G R + + IK P +D  +I++R   V
Sbjct  292  ISTQNNLNLVPKRNEEAKGT--LLGVLDNCVTSVGSRELKKIIKNPFLDIEKIKQRQFYV  349

Query  364  EAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEK  423
            + F  D  LR+ ++E  L+   D+ R+A K      N +D   L + I +     + L++
Sbjct  350  DYFYNDVLLRENIRE-YLKDIYDVERIAGKIIYGTENGKDLLSLKESIRKSLETYKVLKE  408

Query  424  HEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELRE  483
            H+    K +L + V  L D+   ++K + +I         E    ++K  ++  L +LR+
Sbjct  409  HQ--EIKDILDIDVKILLDI---YNKIELIINIEAPFSVREGG--IIKDGYNSELDKLRK  461

Query  484  IMNDLEKKMQSTLISAARD-LGLDPGKQIKLDSSAQFGYYFRVTCKEE----------KV  532
            I + L K     +    R+  G+   K +K+  +  FGY+  VT   E          + 
Sbjct  462  I-SKLGKDFILEIEQRERERTGI---KGLKIKYNKVFGYFIEVTKANEHLVPEDYIRKQT  517

Query  533  LRNNKNFSTVDIQKNGVKF--TNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVE  590
            L N++ +   D+++   K     SK+ +L              +  + K++ +   G+++
Sbjct  518  LVNSERYIVPDLKEYEEKVITAKSKIEAL--------------EYELFKQLTSEIKGHID  563

Query  591  PMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRII-LKASRHACVE-VQDEI  648
             +  L + +A LD V +FAH++      YV+P I   G G I+ +K  RH  VE +    
Sbjct  564  SLYKLANRIANLDIVSNFAHIATKNS--YVKPEI---GDGDILEIKGGRHPIVESLIPSG  618

Query  649  AFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCI  708
             ++ ND+  + DK    I+TGPNM GKSTY++Q  + ++MA IG +V  + A++ IVD I
Sbjct  619  TYVKNDIILD-DKNNLIILTGPNMSGKSTYMKQVALNIIMAHIGSYVAADCAKIPIVDKI  677

Query  709  LARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISE  768
              RVGA D  L G STFM EM E ASIL +AT  S I++DE+GRGTSTYDG  +A AI+E
Sbjct  678  FTRVGASDDLLTGQSTFMLEMTEVASILNNATNKSFIVLDEIGRGTSTYDGISIATAITE  737

Query  769  YIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGI  828
            YI   IGA  +FATH+HELT L  ++    N  V      + +  L ++ KG  D+S+GI
Sbjct  738  YIHNNIGAKTIFATHYHELTELEKELERAINFRVEVKEDGKNVVFLREIVKGGADKSYGI  797

Query  829  HVAELANFPKHVIECAKQKALELEEFQYIGESQ-GYDIMEPAAKKCYLEREQGE-KIIQE  886
             VA L+  PK V+  + +   +LE  + + E++   + M         E E+ E +I+ E
Sbjct  798  EVARLSGVPKEVLNRSNKILKKLETRKNLIENKIKAEQMILFGNGFEEENEEEETEILSE  857

Query  887  FLSKV----KQMPFTEMSEENITIKLKQLKAEVI  916
              SKV    K M    +S     +KL +LK  +I
Sbjct  858  NESKVLELLKNMDLNSLSPLESLLKLNELKKILI  891


>gi|15614932|ref|NP_243235.1|  DNA mismatch repair protein [Bacillus halodurans C-125]
Length=865

 Score =  271 bits (692),  Expect = 9e-71
 Identities = 205/661 (31%), Positives = 333/661 (50%), Gaps = 47/661 (7%)

Query  197  KECVLPGGETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLKGKKGEQMNSA  256
            KE VL  G T  D  +LRQ +    + ++E +  D            L KG +      +
Sbjct  170  KEVVLSPGWTEEDAHRLRQSLS---VTLSEEEAED------------LPKGYE------S  208

Query  257  VLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDF-SQYMKLDIAAVRALNLFQG  315
            +   +E    + +   ++++L L +   +    +   +D  ++ MK+D+ + R L L + 
Sbjct  209  LCENVEQPKLLRAFGRLLQYL-LRTQKRSLEHLQPVQYDPPNEVMKIDLHSRRNLELVE-  266

Query  316  SVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQT  375
            ++ +     SL   +++  T  G RL+ QW+++PL+ K  IE R  LV++F++    R+ 
Sbjct  267  TLREKKKKGSLLWAVDETVTAMGGRLLKQWVERPLLSKKEIERRQGLVQSFLDHYFEREE  326

Query  376  LQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEK--HEGKHQKLLL  433
            L+++L R   DL RL  K      N ++  +L + + ++P +   +EK  ++  +++L  
Sbjct  327  LRDEL-RHVYDLERLVGKVAYGNVNARELVQLRKSLQRIPAIFALVEKIGNQDVNERLQT  385

Query  434  AVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEF-LVKPSFDPNLSELREIMNDLEKKM  492
                  L DL         +  + +D   V   E  +++  F   L   R+   + +  +
Sbjct  386  IDRCESLVDL---------LEHSLVDDPPVSIKEGGMIRDGFHKELDTYRDASRNGKSWI  436

Query  493  QSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFT  552
                       G+   K +K+  +  FGYY  VT     +L   + +       N  ++ 
Sbjct  437  AELEQKEREATGI---KSLKIGYNKVFGYYIEVTKANIHLLEEGR-YERKQTLTNAERYV  492

Query  553  NSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVS  612
              +L          +    + +  +  ++      Y+ P+Q L  ++++LD +  FA VS
Sbjct  493  TPELKEKEALILNAEESIVQLEYDLFLQVREQVKDYIRPLQALAQMISELDVIQGFATVS  552

Query  613  NGAPVPYVRPAILEKGQGRIILKASRHACVE-VQDEIAFIPNDVYFEKDKQMFHIITGPN  671
                  YVRPA+ E     I +K  RH  VE V     ++ NDV   KD +   +ITGPN
Sbjct  553  ETHH--YVRPALQE--DRAIAIKGGRHPVVERVIPNGEYVANDVDM-KDGRSILLITGPN  607

Query  672  MGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLE  731
            M GKSTY+RQ  +I +M QIGCFVP + A + I D +  R+GA D    G STFM EMLE
Sbjct  608  MAGKSTYMRQLALIAIMGQIGCFVPADEARLPIFDQVFTRIGAADDLASGQSTFMVEMLE  667

Query  732  TASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALA  791
            T   L+ AT++SLI++DE+GRGTSTYDG  LA AI EYI  +I A  +F+TH+HELTAL 
Sbjct  668  TKYALQKATQNSLILLDEIGRGTSTYDGMALAQAIIEYIHDEIRAKTLFSTHYHELTALE  727

Query  792  NQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALEL  851
             ++  V N+HV+A+  + T+  L++V  G  D+S+GI+VAELA  P  V E A+    EL
Sbjct  728  KELSDVKNVHVSAVEEQGTVVFLHKVVDGQADRSYGIYVAELAGLPNVVTERAETLLAEL  787

Query  852  E  852
            E
Sbjct  788  E  788


>gi|16803443|ref|NP_464928.1|  DNA mismatch repair protein [Listeria monocytogenes EGD-e]
Length=860

 Score =  270 bits (691),  Expect = 1e-70
 Identities = 192/598 (32%), Positives = 311/598 (52%), Gaps = 33/598 (5%)

Query  265  VAVSSLSAVIKFLELLSDDS--NFGQFELTT-FDFSQYMKLDIAAVRALNLFQGSVEDTT  321
            +++S   A+ K L  L +    + G  +    ++ S YMK+D  + R L L + S+    
Sbjct  216  MSLSEKRAIGKLLHYLKETQKRDLGHLQQAVHYETSNYMKMDYYSKRNLELAE-SIRGKG  274

Query  322  GSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLL  381
               +L  LL+  +T  G R++ QWI +PL+D+ +I ER N V   +     R  L E+L 
Sbjct  275  RQGTLLWLLDNTQTAMGGRMLKQWIDRPLIDRKKIIERQNDVSELMAHFFERLELVENLK  334

Query  382  RRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVFVTPLT  441
              + DL RLA +      N +D  +L   + Q+P +           +  LL++    LT
Sbjct  335  NVY-DLERLAGRVAYGNVNARDLIQLRNSLYQIPRI-----------RATLLSMSSESLT  382

Query  442  DLRSDFSKFQEMIE----TTLDMDQVENHEF-LVKPSFDPNLSELREIMNDLEKKMQSTL  496
            +L       +E+ E      +D   +   E  ++K  ++  L   R+   +  K   + L
Sbjct  383  ELAEQLDPCEELTEKLEEAIMDSAPISIREGGIIKDGYNSQLDTYRDASRN-GKTWIAEL  441

Query  497  ISAARDL-GLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSK  555
                R+L G+   K +K+  +  FGYY  VT     +L   + +       N  ++   +
Sbjct  442  ERKERELTGI---KTLKVGFNRVFGYYIEVTRANTHLLPEGR-YERKQTLTNAERYITPE  497

Query  556  LTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGA  615
            L    +     + +  E +  +  E+  +   Y+E +Q L   ++++D + SFA +S   
Sbjct  498  LKEKEKLILDAEEKSMELEYQLFSEVREMVKDYIERLQKLAKSVSEIDCLQSFADISEKN  557

Query  616  PVPYVRPAILEKGQGRIILKASRHACVE-VQDEIAFIPNDVYFEKDKQMFHIITGPNMGG  674
               ++RP + E G   + +K  RH  VE V    +++ ND   ++++++  +ITGPNM G
Sbjct  558  H--FIRPTLSEDGS--LHVKQGRHPVVEKVMGAQSYVANDCDLDENREIL-LITGPNMSG  612

Query  675  KSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETAS  734
            KSTY+RQ  +  + AQ+GCFVP E A + I D I  R+GA D  + G STFM EMLE  +
Sbjct  613  KSTYMRQVALTAICAQVGCFVPAEEAILPIFDQIFTRIGAADDLIAGQSTFMVEMLEARN  672

Query  735  ILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQI  794
             +  ATKDSLI+ DE+GRGT+TYDG  LA AI EYI   + A  +F+TH+HELT L  ++
Sbjct  673  AIVHATKDSLILFDEIGRGTATYDGMALAQAIIEYIHENVHAKTLFSTHYHELTDLEKEL  732

Query  795  PTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELE  852
              + N+HV+A+     +  L+++K+G  D+S+GIHVAELA  PK +IE A +   +LE
Sbjct  733  RGLQNIHVSAVEENGKVVFLHKIKEGPADKSYGIHVAELAELPKSLIERASRILEQLE  790


>gi|76786970|ref|YP_330630.1|  DNA mismatch repair protein [Streptococcus agalactiae A909]
 gi|77410851|ref|ZP_00787208.1|  DNA mismatch repair protein MutS [Streptococcus agalactiae CJB111]
 gi|77405088|ref|ZP_00782187.1|  DNA mismatch repair protein MutS [Streptococcus agalactiae H36B]
Length=858

 Score =  270 bits (691),  Expect = 1e-70
 Identities = 203/696 (29%), Positives = 348/696 (50%), Gaps = 60/696 (8%)

Query  244  LLKGKKGEQMNSA-VLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKL  302
            LL   + E++N   ++ E    + +S+   +++++            ++  ++   Y+++
Sbjct  194  LLLSYEDERLNDIHLIDEQLTDLEISAAEKLLQYVHRTQKRELSHLQKVVHYEIKDYLQM  253

Query  303  DIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNL  362
              A   +L+L + +   +    SL  LL++ KT  G R++  WI +PL+  NRI+ER ++
Sbjct  254  SYATKNSLDLLENA-RTSKKHGSLYWLLDETKTAMGTRMLRTWIDRPLVSMNRIKERQDI  312

Query  363  VEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALE  422
            ++ F++    R  L E L   + D+ RLA +     AN +D  +L Q ++Q+P +     
Sbjct  313  IQVFLDYFFERNDLTESLKGVY-DIERLASRVSFGKANPKDLLQLGQTLSQIPRI-----  366

Query  423  KHEGKHQKLLLAVFVTPLTDLRSD----FSKFQEMIETTL--DMDQVENHEFLVKPSFDP  476
                   K++L  F  P  D+  +      + + +I T +  +         ++K  FD 
Sbjct  367  -------KMILQSFNQPELDIVVNKIDTMPELESLINTAIAPEAQATITEGNIIKSGFDK  419

Query  477  NLSELREIMN-------DLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKE  529
             L   R +M        D+E K +     AA  +G      +K+D + + GYYF VT   
Sbjct  420  QLDNYRTVMREGTGWIADIEAKER-----AASGIGT-----LKIDYNKKDGYYFHVTNSN  469

Query  530  EKVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYV  589
              ++   ++F      KN  ++  ++L  +  E  + + +    +  I   +      Y+
Sbjct  470  LSLVP--EHFFRKATLKNSERYGTAELAKIEGEVLEAREQSSNLEYDIFMRVRAQVESYI  527

Query  590  EPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVE-VQDEI  648
            + +Q L   +A +D + S A V+      YVRP   ++ Q  I +K  RHA VE V    
Sbjct  528  KRLQELAKTIATVDVLQSLAVVAENHH--YVRPKFNDEHQ--IKIKNGRHATVEKVMGVQ  583

Query  649  AFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCI  708
             +IPN +YF+    +  +ITGPNM GKSTY+RQ  + V+MAQ+G FV  +  ++ + D I
Sbjct  584  EYIPNSIYFDSQTDI-QLITGPNMSGKSTYMRQLALTVIMAQMGGFVSADEVDLPVFDAI  642

Query  709  LARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISE  768
              R+GA D  + G STFM EM+E    ++ A+  SLI+ DELGRGT+TYDG  LA +I E
Sbjct  643  FTRIGAADDLISGQSTFMVEMMEANQAVKRASDKSLILFDELGRGTATYDGMALAQSIIE  702

Query  769  YIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGI  828
            YI  ++ A  MFATH+HELT L+ Q+  + N+HV  L  +  +T L++++ G  D+S+GI
Sbjct  703  YIHDRVRAKTMFATHYHELTDLSEQLTRLVNVHVATLERDGEVTFLHKIESGPADKSYGI  762

Query  829  HVAELANFPKHVIECAKQ--KALELEEFQYIGESQGYDIMEPAAKKCYLEREQGE-----  881
            HVA++A  P  +++ A      LE +  Q I  +    +     ++   E++QG+     
Sbjct  763  HVAKIAGLPIDLLDRATDILSQLEADAVQLIVSAPQEAVTADLNEELDSEKQQGQLSLFE  822

Query  882  ------KIIQEFLSKVKQMPFTEMSEENITIKLKQL  911
                  ++I+E L  +  M  T M   N    LK+L
Sbjct  823  EPSNAGRVIEE-LEAIDIMNLTPMQAMNAIFDLKKL  857


>gi|22538235|ref|NP_689086.1|  DNA mismatch repair protein [Streptococcus agalactiae 2603V/R]
 gi|25012092|ref|NP_736487.1|  DNA mismatch repair protein [Streptococcus agalactiae NEM316]
 gi|77414039|ref|ZP_00790210.1|  DNA mismatch repair protein MutS [Streptococcus agalactiae 515]
 gi|76798537|ref|ZP_00780770.1|  DNA mismatch repair protein MutS [Streptococcus agalactiae 18RS21]
Length=858

 Score =  270 bits (691),  Expect = 1e-70
 Identities = 203/696 (29%), Positives = 347/696 (49%), Gaps = 60/696 (8%)

Query  244  LLKGKKGEQMNSA-VLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKL  302
            LL   + E++N   ++ E    + +S+   +++++            ++  ++   Y+++
Sbjct  194  LLLSYEDERLNDIHLIDEQLTDLEISAAEKLLQYVHRTQKRELSHLQKVVHYEIKDYLQM  253

Query  303  DIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNL  362
              A   +L+L + +   +    SL  LL++ KT  G R++  WI +PL+  NRI+ER ++
Sbjct  254  SYATKNSLDLLENA-RTSKKHGSLYWLLDETKTAMGTRMLRTWIDRPLVSMNRIKERQDI  312

Query  363  VEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALE  422
            ++ F++    R  L E L   + D+ RLA +     AN +D  +L Q ++Q+P +     
Sbjct  313  IQVFLDYFFERNDLTESLKGVY-DIERLASRVSFGKANPKDLLQLGQTLSQIPRI-----  366

Query  423  KHEGKHQKLLLAVFVTPLTDLRSD----FSKFQEMIETTL--DMDQVENHEFLVKPSFDP  476
                   K++L  F  P  D+  +      + + +I T +  +         ++K  FD 
Sbjct  367  -------KMILQSFNQPELDIIVNKIDTMPELESLINTAIAPEAQATITEGNIIKSGFDK  419

Query  477  NLSELREIMN-------DLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKE  529
             L   R +M        D+E K +     AA  +G      +K+D + + GYYF VT   
Sbjct  420  QLDNYRTVMREGTGWIADIEAKER-----AASGIGT-----LKIDYNKKDGYYFHVTNSN  469

Query  530  EKVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYV  589
              ++   ++F      KN  ++  ++L  +  E  + + +    +  I   +      Y+
Sbjct  470  LSLVP--EHFFRKATLKNSERYGTAELAKIEGEMLEAREQSSNLEYDIFMRVRAQVESYI  527

Query  590  EPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVE-VQDEI  648
            + +Q L   +A +D + S A V+      YVRP   ++ Q  I +K  RHA VE V    
Sbjct  528  KRLQELAKTIATVDVLQSLAVVAEN--YHYVRPKFNDQHQ--IKIKNGRHATVEKVMGVQ  583

Query  649  AFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCI  708
             +IPN +YF+    +  +ITGPNM GKSTY+RQ  + V+MAQ+G FV  +  ++ + D I
Sbjct  584  EYIPNSIYFDSQTDI-QLITGPNMSGKSTYMRQLALTVIMAQMGGFVSADEVDLPVFDAI  642

Query  709  LARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISE  768
              R+GA D  + G STFM EM+E    ++ A+  SLI+ DELGRGT+TYDG  LA +I E
Sbjct  643  FTRIGAADDLISGQSTFMVEMMEANQAVKRASDKSLILFDELGRGTATYDGMALAQSIIE  702

Query  769  YIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGI  828
            YI  ++ A  MFATH+HELT L+ Q+  + N+HV  L  +  +T L++++ G  D+S+GI
Sbjct  703  YIHDRVRAKTMFATHYHELTDLSEQLTRLVNVHVATLERDGEVTFLHKIESGPADKSYGI  762

Query  829  HVAELANFPKHVIECAKQ--KALELEEFQYIGESQGYDIMEPAAKKCYLEREQGE-----  881
            HVA++A  P  +++ A      LE +  Q I       +     ++   E++QG+     
Sbjct  763  HVAKIAGLPIDLLDRATDILSQLEADAVQLIVSPSQEAVTADLNEELDSEKQQGQLSLFE  822

Query  882  ------KIIQEFLSKVKQMPFTEMSEENITIKLKQL  911
                  ++I+E L  +  M  T M   N    LK+L
Sbjct  823  EPSNAGRVIEE-LEAIDIMNLTPMQAMNAIFDLKKL  857


>gi|75854083|ref|ZP_00761802.1|  COG0249: Mismatch repair ATPase (MutS family) [Vibrio sp. Ex25]
Length=844

 Score =  270 bits (691),  Expect = 1e-70
 Identities = 183/591 (30%), Positives = 307/591 (51%), Gaps = 50/591 (8%)

Query  293  TFDFS-QYMKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLM  351
            TFD   Q + LD A  R L + Q     T    +LAA+L+ C TP G R++ +W+ QP+ 
Sbjct  247  TFDHQDQSVILDAATRRNLEITQNLAGGT--DNTLAAVLDHCATPMGSRMLKRWLHQPMR  304

Query  352  DKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGI  411
                +  RL+ +    E A       +  L++  D+ R+  +   ++A  +D  RL   +
Sbjct  305  CIETLNNRLDAIGEIKEQALFADL--QPTLKQIGDIERILARLALRSARPRDMARLRNAM  362

Query  412  NQLPNVIQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQ--VENHEFL  469
             QLP +              L   ++  L    +   +  +++E  +  +   V     +
Sbjct  363  QQLPELESVTAS--------LTHPYLAKLAQYAAPIDEVCDLLERAIKENPPVVIRDGGV  414

Query  470  VKPSFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKE  529
            +   ++  L E R++ +   + ++          G+D    +K+  +   G++ +V+  +
Sbjct  415  IAEGYNAELDEWRKLADGATEYLEQLERDERERHGIDT---LKVGYNNVHGFFIQVSRGQ  471

Query  530  E----------KVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVK  579
                       + L+N + +   +++++  K  NSK  +L              +  + +
Sbjct  472  SHLVPPHYVRRQTLKNAERYIIPELKEHEDKVLNSKSKALAL------------EKQLWE  519

Query  580  EIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRH  639
            E+ ++    +E +Q L   L+QLD + + A  ++   + Y RP +++     I ++A RH
Sbjct  520  ELFDLLMPNLEKLQNLASALSQLDVLQNLAERADS--LDYCRPTLVK--DAGIHIQAGRH  575

Query  640  ACVEVQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCES  699
              VE      FI N +     ++M  IITGPNMGGKSTY+RQT +I LMA IG +VP ES
Sbjct  576  PVVEQVTTEPFIANPIELNPARKML-IITGPNMGGKSTYMRQTALIALMAHIGSYVPAES  634

Query  700  AEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDG  759
            A++  +D I  R+GA D    G STFM EM ETA+IL +ATK+SL+++DE+GRGTSTYDG
Sbjct  635  AQIGSLDRIFTRIGASDDLASGRSTFMVEMTETANILHNATKNSLVLMDEIGRGTSTYDG  694

Query  760  FGLAWAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKK  819
              LAWA +E++AT+IGA  +FATH+ ELT L NQ+P + N+H+ A+   +++  ++ V++
Sbjct  695  LSLAWASAEWLATQIGAMTLFATHYFELTELPNQLPNLANVHLDAVEHGDSIAFMHAVQE  754

Query  820  GVCDQSFGIHVAELANFPKHVIECAKQKALELEEFQYIGESQGYDIMEPAA  870
            G   +S+G+ VA LA  PK VI+ A+ K  +LE+       Q  D   P+A
Sbjct  755  GAASKSYGLAVAGLAGVPKTVIKNARNKLSQLEQL-----GQNSDAPRPSA  800


>gi|81427976|ref|YP_394975.1|  DNA mismatch repair protein MutS [Lactobacillus sakei subsp. 
sakei 23K]
Length=867

 Score =  270 bits (690),  Expect = 2e-70
 Identities = 192/566 (33%), Positives = 300/566 (53%), Gaps = 26/566 (4%)

Query  294  FDFSQYMKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDK  353
            ++ SQY+KLD +A   L L   S+     S +L  LL++ KT  G RL+ QW+++PL+D 
Sbjct  248  YEPSQYLKLDHSAKMNLEL-TASLRTGHKSGTLLWLLDETKTAMGGRLLKQWLERPLLDL  306

Query  354  NRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQ  413
            N+I+ R N V +F++    R  LQE L + + DL RLA +    + N +D  +L   + Q
Sbjct  307  NQIKNRQNQVASFLQHYFERTNLQEALTKVY-DLERLAGRVAFGSVNGRDLIQLKTSLEQ  365

Query  414  LP---NVIQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVEN--HEF  468
            +P   +V+  + + +   Q L     + P+ D+R+       +IET ++ D   +     
Sbjct  366  IPKIKDVLTGINETQAFDQALTR---LDPVDDVRT-------LIETAINPDSPISVTDGG  415

Query  469  LVKPSFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCK  528
            +++  +D  L + R  M++ ++ +           G+     +K+  +  FGYY  VT  
Sbjct  416  IIQDGYDEQLDQYRNAMSNGKQWLAQLEAQEREATGIH---NLKIGFNRVFGYYIEVTRA  472

Query  529  EEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGY  588
                L   + +       N  +F   +L    +   + +      +  +  ++       
Sbjct  473  NLSSLPEGR-YERKQTLTNAERFITPELKEKEQLILEAEERSTALEYELFTQVREQVKLQ  531

Query  589  VEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVE-VQDE  647
            +E +QTL   +A LD + SFA VS      YV+P  L      I L   RH  VE V   
Sbjct  532  IERLQTLAKGVAALDVLQSFAVVSES--YHYVQPT-LRTDSREIDLVDGRHPVVEKVLGR  588

Query  648  IAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDC  707
              +IPN V   K+  M  +ITGPNM GKSTY+RQ  + V+MAQ+GCFVP +SA + + D 
Sbjct  589  QKYIPNAVQMGKETDML-LITGPNMSGKSTYMRQLALTVIMAQMGCFVPAKSANLPVFDQ  647

Query  708  ILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAIS  767
            I  R+GA D  + G STFM EM+E    + SAT +SLI+ DE+GRGT+TYDG  LA AI 
Sbjct  648  IFTRIGAADDLISGQSTFMVEMMEANRAIMSATANSLILFDEIGRGTATYDGMALAQAII  707

Query  768  EYIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFG  827
            EYI   + A  +F+TH+HELTALA+ +  + N+HV A+     L  L+++  G  D+S+G
Sbjct  708  EYIHDHVHAKTLFSTHYHELTALADTLTALRNVHVGAVEENGELVFLHKMLAGPADKSYG  767

Query  828  IHVAELANFPKHVIECAKQKALELEE  853
            IHVA+LA  P+ +++ A     +LE+
Sbjct  768  IHVAKLAGMPETLLQRADVILGQLED  793


>gi|91227833|ref|ZP_01262006.1|  DNA mismatch repair protein [Vibrio alginolyticus 12G01]
Length=853

 Score =  270 bits (690),  Expect = 2e-70
 Identities = 183/591 (30%), Positives = 308/591 (52%), Gaps = 50/591 (8%)

Query  293  TFDFS-QYMKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLM  351
            TFD   Q + LD A  R L + Q     T    +LAA+L+ C TP G R++ +W+ QP+ 
Sbjct  256  TFDHQDQSVILDAATRRNLEITQNLAGGT--DNTLAAVLDHCATPMGSRMLKRWLHQPMR  313

Query  352  DKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGI  411
                +  RL+ +    E A       +  L++  D+ R+  +   ++A  +D  RL   +
Sbjct  314  CIETLNNRLDAIGEIKEQALFADL--QPTLKQIGDIERILARLALRSARPRDMARLRNAM  371

Query  412  NQLPNVIQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQ--VENHEFL  469
             QLP +              L   ++T L    +   +  +++E  +  +   V     +
Sbjct  372  QQLPELESVTAS--------LTHPYLTKLAKYAAPIDEVCDLLERAIKENPPVVIRDGGV  423

Query  470  VKPSFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKE  529
            +   ++  L E R++ +   + ++          G+D    +K+  +   G++ +V+  +
Sbjct  424  IAEGYNAELDEWRKLADGATEYLEQLERDERERHGIDT---LKVGYNNVHGFFIQVSRGQ  480

Query  530  E----------KVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVK  579
                       + L+N + +   +++++  K  NSK  +L              +  + +
Sbjct  481  SHLVPPHYVRRQTLKNAERYIIPELKEHEDKVLNSKSKALAL------------EKQLWE  528

Query  580  EIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRH  639
            E+ ++    +E +Q L   L+QLD + + A  ++   + Y RP +++     I ++A RH
Sbjct  529  ELFDLLMPNLEKLQNLASALSQLDVLQNLAERADS--LDYCRPTLVK--DAGIHIQAGRH  584

Query  640  ACVEVQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCES  699
              VE      FI N +     ++M  IITGPNMGGKSTY+RQT +I LMA IG +VP ES
Sbjct  585  PVVEQVTTEPFIANPIELNPARKML-IITGPNMGGKSTYMRQTALIALMAHIGSYVPAES  643

Query  700  AEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDG  759
            A++  +D I  R+GA D    G STFM EM ETA+IL +ATK+SL+++DE+GRGTSTYDG
Sbjct  644  AQIGSLDRIFTRIGASDDLASGRSTFMVEMTETANILHNATKNSLVLMDEIGRGTSTYDG  703

Query  760  FGLAWAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKK  819
              LAWA +E++AT+IGA  +FATH+ ELT L +Q+P + N+H+ A+   +++  ++ V++
Sbjct  704  LSLAWASAEWLATQIGAMTLFATHYFELTELPSQLPNLANVHLDAVEHGDSIAFMHAVQE  763

Query  820  GVCDQSFGIHVAELANFPKHVIECAKQKALELEEFQYIGESQGYDIMEPAA  870
            G   +S+G+ VA LA  PK VI+ A+ K  +LE+       Q  D   P+A
Sbjct  764  GAASKSYGLAVAGLAGVPKTVIKNARNKLSQLEQL-----GQNSDTPRPSA  809


>gi|46907631|ref|YP_014020.1|  DNA mismatch repair protein [Listeria monocytogenes str. 4b F2365]
Length=860

 Score =  270 bits (689),  Expect = 2e-70
 Identities = 191/598 (31%), Positives = 312/598 (52%), Gaps = 33/598 (5%)

Query  265  VAVSSLSAVIKFLELLSDDS--NFGQFELTT-FDFSQYMKLDIAAVRALNLFQGSVEDTT  321
            +++S   A+ K L  L +    + G  +    ++ S YMK+D  + R L L + S+    
Sbjct  216  MSLSEKRAIGKLLHYLKETQKRDLGHLQQAVHYETSNYMKMDYYSKRNLELAE-SIRGKG  274

Query  322  GSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLL  381
               +L  LL+  +T  G R++ QWI +PL+D+ +I +R N V   +     R  L E+L 
Sbjct  275  RQGTLLWLLDNTQTAMGGRMLKQWIDRPLIDRKKIIDRQNDVSELMAHFFERLELVENLK  334

Query  382  RRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVFVTPLT  441
              + DL RLA +      N +D  +L   + Q+P +           +  LL++    LT
Sbjct  335  NVY-DLERLAGRVAYGNVNARDLIQLRNSLYQIPRI-----------RATLLSMSSESLT  382

Query  442  DLRSDFSKFQEMIE----TTLDMDQVENHEF-LVKPSFDPNLSELREIMNDLEKKMQSTL  496
            +L +     +E+ E      +D   +   E  ++K  ++  L   R+   +  K   + L
Sbjct  383  ELANQLDPCEELTEKLEEAIMDSAPISIREGGIIKDGYNSQLDTYRDASRN-GKTWIAEL  441

Query  497  ISAARDL-GLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSK  555
                R+L G+   K +K+  +  FGYY  VT     +L   + +       N  ++   +
Sbjct  442  ERKERELTGI---KTMKVGFNRVFGYYIEVTRANTHLLPEGR-YERKQTLTNAERYITPE  497

Query  556  LTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGA  615
            L    +     + +  E +  +  E+  +   Y+E +Q L   ++++D + SFA +S   
Sbjct  498  LKEKEKLILDAEEKSMELEYQLFSEVREMVKDYIERLQKLAKSVSEIDCLQSFADISEKN  557

Query  616  PVPYVRPAILEKGQGRIILKASRHACVE-VQDEIAFIPNDVYFEKDKQMFHIITGPNMGG  674
               ++RP + E G   + +K  RH  VE V    +++ ND   ++++++  +ITGPNM G
Sbjct  558  H--FIRPTLSEDGS--LHVKQGRHPVVEKVMGAQSYVANDCDLDENREIL-LITGPNMSG  612

Query  675  KSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETAS  734
            KSTY+RQ  +  + AQ+GCFVP E A + I D I  R+GA D  + G STFM EMLE  +
Sbjct  613  KSTYMRQVALTAICAQVGCFVPAEEAILPIFDQIFTRIGAADDLIAGQSTFMVEMLEARN  672

Query  735  ILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQI  794
             +  ATKDSLI+ DE+GRGT+TYDG  LA AI EYI   + A  +F+TH+HELT L  ++
Sbjct  673  AIVHATKDSLILFDEIGRGTATYDGMALAQAIIEYIHENVHAKTLFSTHYHELTDLEKEL  732

Query  795  PTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELE  852
              + N+HV+A+     +  L+++K+G  D+S+GIHVAELA  PK +IE A +   +LE
Sbjct  733  SGLQNIHVSAVEENGKVVFLHKIKEGPADKSYGIHVAELAELPKSLIERASRILEQLE  790


>gi|53715862|ref|YP_101854.1|  DNA mismatch repair protein [Bacteroides fragilis YCH46]
Length=862

 Score =  269 bits (688),  Expect = 3e-70
 Identities = 232/849 (27%), Positives = 396/849 (46%), Gaps = 79/849 (9%)

Query  23   FQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMGPAGAKNLQSVVLSK  82
            F  +  K    V LF  GDFY  +  DA++AA  +  T   +        K ++      
Sbjct  5    FLDLKAKHPDAVMLFRCGDFYETYSTDAIIAAEILGIT---LTKRANGKGKTVEMAGFPH  61

Query  83   MNFESFVKDLLLVRQYRVEVYKNRAGNKASKEN-DWYLAYKASPGNLSQFEDILFGNNDM  141
               ++++  L+   + RV +       K +K+     +    +PG       + +  N+ 
Sbjct  62   HALDTYLPKLIRAGK-RVAICDQLEDPKTTKKLVKRGITELVTPGVSINDNVLNYKENNF  120

Query  142  SASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKECVL  201
             A++           G+   G+ ++D    +    E P    F  ++ LL    PKE + 
Sbjct  121  LAAVHF---------GKSACGIAFLDISTGEFLTAEGP----FDYVDKLLNNFAPKEILF  167

Query  202  PGGETA---GDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLKGKKGEQMNSAVL  258
              G+     G+ G      +    + TE    +           +LLK  + + +    +
Sbjct  168  ERGKRGMFEGNFGSKFFTFELDDWVFTESSSRE-----------KLLKHFETKNLKGFGV  216

Query  259  PEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLFQGSVE  318
              ++N +  S   A++++L++           L   +  +Y++LD   VR+L L  GS+ 
Sbjct  217  EHLKNGIIASG--AILQYLDMTEHTQVGHITSLARIEEDKYVRLDKFTVRSLELI-GSMN  273

Query  319  DTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQE  378
            D  G  SL  +++K  +P G RL+ +W+  PL D+  I +RLN+VE F    + R+ + E
Sbjct  274  D--GGSSLLHVIDKTISPMGARLLKRWMVFPLKDEKPINDRLNVVEYFFRKPDFRELI-E  330

Query  379  DLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKH-----QKLLL  433
            D L R  DL R+  K      + ++  +L   +  +  + +A ++ +        ++L L
Sbjct  331  DELHRIGDLERIISKVAVGRVSPREVVQLKVALQAIEPIKEACQQADNPSLNRIGEQLNL  390

Query  434  AVFVTPLTDLRSDFSKFQEMIETTLDMDQ--VENHEFLVKPSFDPNLSELREIM---NDL  488
             + +             ++ IE  ++ D   + N   ++K   D  L ELR+I     D 
Sbjct  391  CISI-------------RDRIEKEINNDPPLLINKGGVIKDGVDTELDELRQIAYSGKDY  437

Query  489  EKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRV-TCKEEKVLRNNKNFSTVDIQKN  547
              K+Q       R+  L     +K+  ++ FGYY  V    ++KV +      T+    N
Sbjct  438  LLKIQQ------RESELTGIPSLKIAYNSVFGYYIEVRNVHKDKVPQEWIRKQTL---VN  488

Query  548  GVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVS  607
              ++   +L    E+    + +    +  +  E+V   S ++  +Q   + +A++D ++S
Sbjct  489  AERYITQELKEYEEKILGAEDKILVLETRLYTELVQALSEFIPAIQINANQIARIDCLLS  548

Query  608  FAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIA--FIPNDVYFEKDKQMFH  665
            FA+V+      Y+RP I +     + ++  RH  +E Q  I   +I NDV  +   Q   
Sbjct  549  FANVAKENN--YIRPVIEDNDV--LDIRQGRHPVIEKQLPIGEKYIANDVLLDNATQQVI  604

Query  666  IITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTF  725
            IITGPNM GKS  +RQT +I L+AQIG FVP ESA + +VD I  RVGA D+   G STF
Sbjct  605  IITGPNMAGKSALLRQTALITLLAQIGSFVPAESAHIGLVDKIFTRVGASDNISVGESTF  664

Query  726  MAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYI--ATKIGAFCMFATH  783
            M EM E + IL + +  SL++ DELGRGTSTYDG  +AWAI EYI    K  A  +FATH
Sbjct  665  MVEMNEASDILNNISSRSLVLFDELGRGTSTYDGISIAWAIVEYIHEHPKAKARTLFATH  724

Query  784  FHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKHVIEC  843
            +HEL  +      + N +V+    +  +  L ++++G  + SFGIHVA++A  PK +++ 
Sbjct  725  YHELNEMEKSFKRIKNYNVSVKEVDNKVIFLRKLERGGSEHSFGIHVAKMAGMPKSIVKR  784

Query  844  AKQKALELE  852
            A +   +LE
Sbjct  785  ANEILKQLE  793


>gi|60683780|ref|YP_213924.1|  DNA mismatch repair protein [Bacteroides fragilis NCTC 9343]
Length=879

 Score =  269 bits (688),  Expect = 3e-70
 Identities = 232/849 (27%), Positives = 396/849 (46%), Gaps = 79/849 (9%)

Query  23   FQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMGPAGAKNLQSVVLSK  82
            F  +  K    V LF  GDFY  +  DA++AA  +  T   +        K ++      
Sbjct  22   FLDLKAKHPDAVMLFRCGDFYETYSTDAIIAAEILGIT---LTKRANGKGKTVEMAGFPH  78

Query  83   MNFESFVKDLLLVRQYRVEVYKNRAGNKASKEN-DWYLAYKASPGNLSQFEDILFGNNDM  141
               ++++  L+   + RV +       K +K+     +    +PG       + +  N+ 
Sbjct  79   HALDTYLPKLIRAGK-RVAICDQLEDPKTTKKLVKRGITELVTPGVSINDNVLNYKENNF  137

Query  142  SASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKECVL  201
             A++           G+   G+ ++D    +    E P    F  ++ LL    PKE + 
Sbjct  138  LAAVHF---------GKSACGIAFLDISTGEFLTAEGP----FDYVDKLLNNFAPKEILF  184

Query  202  PGGETA---GDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLKGKKGEQMNSAVL  258
              G+     G+ G      +    + TE    +           +LLK  + + +    +
Sbjct  185  ERGKRGMFEGNFGSKFFTFELDDWVFTESSSRE-----------KLLKHFETKNLKGFGV  233

Query  259  PEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLFQGSVE  318
              ++N +  S   A++++L++           L   +  +Y++LD   VR+L L  GS+ 
Sbjct  234  EHLKNGIIASG--AILQYLDMTEHTQVGHITSLARIEEDKYVRLDKFTVRSLELI-GSMN  290

Query  319  DTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQE  378
            D  G  SL  +++K  +P G RL+ +W+  PL D+  I +RLN+VE F    + R+ + E
Sbjct  291  D--GGSSLLHVIDKTISPMGARLLKRWMVFPLKDEKPINDRLNVVEYFFRKPDFRELI-E  347

Query  379  DLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKH-----QKLLL  433
            D L R  DL R+  K      + ++  +L   +  +  + +A ++ +        ++L L
Sbjct  348  DELHRIGDLERIISKVAVGRVSPREVVQLKVALQAIEPIKEACQQADNPSLNRIGEQLNL  407

Query  434  AVFVTPLTDLRSDFSKFQEMIETTLDMDQ--VENHEFLVKPSFDPNLSELREIM---NDL  488
             + +             ++ IE  ++ D   + N   ++K   D  L ELR+I     D 
Sbjct  408  CISI-------------RDRIEKEINNDPPLLINKGGVIKDGVDTELDELRQIAYSGKDY  454

Query  489  EKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRV-TCKEEKVLRNNKNFSTVDIQKN  547
              K+Q       R+  L     +K+  ++ FGYY  V    ++KV +      T+    N
Sbjct  455  LLKIQQ------RESELTGIPSLKIAYNSVFGYYIEVRNVHKDKVPQEWIRKQTL---VN  505

Query  548  GVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVS  607
              ++   +L    E+    + +    +  +  E+V   S ++  +Q   + +A++D ++S
Sbjct  506  AERYITQELKEYEEKILGAEDKILVLETRLYTELVQALSEFIPAIQINANQIARIDCLLS  565

Query  608  FAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIA--FIPNDVYFEKDKQMFH  665
            FA+V+      Y+RP I +     + ++  RH  +E Q  I   +I NDV  +   Q   
Sbjct  566  FANVAKENN--YIRPVIEDNDV--LDIRQGRHPVIEKQLPIGEKYIANDVLLDNATQQVI  621

Query  666  IITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTF  725
            IITGPNM GKS  +RQT +I L+AQIG FVP ESA + +VD I  RVGA D+   G STF
Sbjct  622  IITGPNMAGKSALLRQTALITLLAQIGSFVPAESAHIGLVDKIFTRVGASDNISVGESTF  681

Query  726  MAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYI--ATKIGAFCMFATH  783
            M EM E + IL + +  SL++ DELGRGTSTYDG  +AWAI EYI    K  A  +FATH
Sbjct  682  MVEMNEASDILNNISSRSLVLFDELGRGTSTYDGISIAWAIVEYIHEHPKAKARTLFATH  741

Query  784  FHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKHVIEC  843
            +HEL  +      + N +V+    +  +  L ++++G  + SFGIHVA++A  PK +++ 
Sbjct  742  YHELNEMEKSFKRIKNYNVSVKEVDNKVIFLRKLERGGSEHSFGIHVAKMAGMPKSIVKR  801

Query  844  AKQKALELE  852
            A +   +LE
Sbjct  802  ANEILKQLE  810


>gi|15640557|ref|NP_230186.1|  DNA mismatch repair protein [Vibrio cholerae O1 biovar eltor 
str. N16961]
 gi|75829241|ref|ZP_00758551.1|  COG0249: Mismatch repair ATPase (MutS family) [Vibrio cholerae 
MO10]
 gi|75815683|ref|ZP_00746180.1|  COG0249: Mismatch repair ATPase (MutS family) [Vibrio cholerae 
V52]
Length=862

 Score =  269 bits (687),  Expect = 4e-70
 Identities = 180/571 (31%), Positives = 299/571 (52%), Gaps = 52/571 (9%)

Query  298  QYMKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIE  357
            Q + LD A  R L L       T    +LA +L+ C TP G R++ +WI QP+ D   + 
Sbjct  270  QSVILDAATRRNLELTHNLAGGT--DNTLAEVLDHCATPMGSRMLKRWIHQPMRDNATLN  327

Query  358  ERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNV  417
            +RL+ +    E A   +     +L++  D+ R+  +   ++A  +D  RL   + QLP +
Sbjct  328  QRLDAITELKETALYGEL--HPVLKQIGDIERILARLALRSARPRDLARLRHAMQQLPEL  385

Query  418  IQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPS----  473
               + + +  H           LT+LR+      E+ +  L+    EN   +++      
Sbjct  386  HSVMSELKQPH-----------LTELRTHAEPMDELCDL-LERAIKENPPVVIRDGGVIA  433

Query  474  --FDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEE-  530
              +   L E R++ N   + ++          G+D    +K+  +   G+Y +V+  +  
Sbjct  434  DGYSAELDEWRDLANGATEFLERLEAEERDRHGIDT---LKVGYNNVHGFYIQVSRGQSH  490

Query  531  ---------KVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEI  581
                     + L+N + +   +++++  K  NSK  +L              +  + +E+
Sbjct  491  LVPPHYVRRQTLKNAERYIIEELKQHEDKVLNSKSRALAL------------EKQLWEEL  538

Query  582  VNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHAC  641
             ++   ++E +Q L   +AQLD + + A  +    + Y RP +++  +  I ++  RH  
Sbjct  539  FDLLMPHLEQLQQLAASVAQLDVLQNLAERAEN--LEYCRPTLVQ--EAGIHIQGGRHPV  594

Query  642  VEVQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAE  701
            VE      FI N +     ++M  IITGPNMGGKSTY+RQT +I LMA IG +VP ESA 
Sbjct  595  VERVMNEPFIANPIELNPQRRML-IITGPNMGGKSTYMRQTALIALMAHIGSYVPAESAS  653

Query  702  VSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFG  761
            +  +D I  R+GA D    G STFM EM ETA+IL +AT++SL+++DE+GRGTSTYDG  
Sbjct  654  IGPLDRIFTRIGASDDLASGRSTFMVEMTETANILHNATRNSLVLMDEIGRGTSTYDGLS  713

Query  762  LAWAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGV  821
            LAWA +E++A +IGA  +FATH+ ELT L N +P + N+H+ A+   + +  ++ V++G 
Sbjct  714  LAWASAEWLAKEIGAMTLFATHYFELTELPNVLPHLANVHLDAVEHGDGIAFMHAVQEGA  773

Query  822  CDQSFGIHVAELANFPKHVIECAKQKALELE  852
              +S+G+ VA LA  PK VI+ A+ K  +LE
Sbjct  774  ASKSYGLAVAGLAGVPKPVIKNARAKLQQLE  804


>gi|75825907|ref|ZP_00755342.1|  COG0249: Mismatch repair ATPase (MutS family) [Vibrio cholerae 
O395]
Length=879

 Score =  269 bits (687),  Expect = 4e-70
 Identities = 180/571 (31%), Positives = 299/571 (52%), Gaps = 52/571 (9%)

Query  298  QYMKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIE  357
            Q + LD A  R L L       T    +LA +L+ C TP G R++ +WI QP+ D   + 
Sbjct  287  QSVILDAATRRNLELTHNLAGGT--DNTLAEVLDHCATPMGSRMLKRWIHQPMRDNATLN  344

Query  358  ERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNV  417
            +RL+ +    E A   +     +L++  D+ R+  +   ++A  +D  RL   + QLP +
Sbjct  345  QRLDAITELKETALYGEL--HPVLKQIGDIERILARLALRSARPRDLARLRHAMQQLPEL  402

Query  418  IQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPS----  473
               + + +  H           LT+LR+      E+ +  L+    EN   +++      
Sbjct  403  HSVMSELKQPH-----------LTELRTHAEPMDELCDL-LERAIKENPPVVIRDGGVIA  450

Query  474  --FDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEE-  530
              +   L E R++ N   + ++          G+D    +K+  +   G+Y +V+  +  
Sbjct  451  DGYSAELDEWRDLANGATEFLERLEAEERDRHGIDT---LKVGYNNVHGFYIQVSRGQSH  507

Query  531  ---------KVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEI  581
                     + L+N + +   +++++  K  NSK  +L              +  + +E+
Sbjct  508  LVPPHYVRRQTLKNAERYIIEELKQHEDKVLNSKSRALAL------------EKQLWEEL  555

Query  582  VNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHAC  641
             ++   ++E +Q L   +AQLD + + A  +    + Y RP +++  +  I ++  RH  
Sbjct  556  FDLLMPHLEQLQQLAASVAQLDVLQNLAERAEN--LEYCRPTLVQ--EAGIHIQGGRHPV  611

Query  642  VEVQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAE  701
            VE      FI N +     ++M  IITGPNMGGKSTY+RQT +I LMA IG +VP ESA 
Sbjct  612  VERVMNEPFIANPIELNPQRRML-IITGPNMGGKSTYMRQTALIALMAHIGSYVPAESAS  670

Query  702  VSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFG  761
            +  +D I  R+GA D    G STFM EM ETA+IL +AT++SL+++DE+GRGTSTYDG  
Sbjct  671  IGPLDRIFTRIGASDDLASGRSTFMVEMTETANILHNATRNSLVLMDEIGRGTSTYDGLS  730

Query  762  LAWAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGV  821
            LAWA +E++A +IGA  +FATH+ ELT L N +P + N+H+ A+   + +  ++ V++G 
Sbjct  731  LAWASAEWLAKEIGAMTLFATHYFELTELPNVLPHLANVHLDAVEHGDGIAFMHAVQEGA  790

Query  822  CDQSFGIHVAELANFPKHVIECAKQKALELE  852
              +S+G+ VA LA  PK VI+ A+ K  +LE
Sbjct  791  ASKSYGLAVAGLAGVPKPVIKNARAKLQQLE  821


>gi|27364957|ref|NP_760485.1|  DNA mismatch repair protein [Vibrio vulnificus CMCP6]
Length=844

 Score =  268 bits (686),  Expect = 5e-70
 Identities = 181/563 (32%), Positives = 296/563 (52%), Gaps = 44/563 (7%)

Query  302  LDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLN  361
            LD A  R L L Q     +    +LAA+L++C TP G R++ +WI QP+      E RL+
Sbjct  257  LDAATRRNLELTQNLAGGS--DNTLAAVLDRCATPMGSRMLKRWIHQPMRCITTREHRLD  314

Query  362  LVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQAL  421
             +    E A         ++++  D+ R+  +   ++A  +D  RL   + QLP + Q L
Sbjct  315  AIAELKEQALFSDI--HPVVKQIGDIERILARLALRSARPRDLARLRHAMQQLPELAQTL  372

Query  422  EKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQ--VENHEFLVKPSFDPNLS  479
                  H K L A    P+ D+        E++E  +  +   V     ++   +  +L 
Sbjct  373  SSLGNSHLKSL-ATAAAPMDDVC-------ELLERAIKENPPVVIRDGGVIAEGYSADLD  424

Query  480  ELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEE---------  530
            E R++ +     ++          G+D    +K+  +   G+Y +V+  +          
Sbjct  425  EWRDLADGATGYLEKLEEEERDRHGIDT---LKVGYNNVHGFYIQVSRGQSHLVPPHYVR  481

Query  531  -KVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYV  589
             + L+N + +   +++++  K  NSK  +L              +  + +E+ ++   ++
Sbjct  482  RQTLKNAERYIIPELKEHEDKVLNSKSKALAI------------EKQLWEELFDLLLPHL  529

Query  590  EPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIA  649
              +Q L   +AQLD + + A  ++   + Y RP + +     + + A RH  VE      
Sbjct  530  ARLQELAAAVAQLDVLQNLAERAD--TLDYCRPNLTKDPV--VHITAGRHPVVEQVTSDP  585

Query  650  FIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCIL  709
            FI N +     ++M  IITGPNMGGKSTY+RQT +I LMA IG +VP ESA +  +D I 
Sbjct  586  FIANPIELNSQRKML-IITGPNMGGKSTYMRQTALIALMAHIGSYVPAESATIGSIDRIF  644

Query  710  ARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEY  769
             R+GA D    G STFM EM ETA+IL +AT +SL+++DE+GRGTSTYDG  LAWA + +
Sbjct  645  TRIGASDDLASGRSTFMVEMTETANILHNATANSLVLMDEIGRGTSTYDGLSLAWASAHW  704

Query  770  IATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIH  829
            +AT+IGA  +FATH+ ELT L NQ+P + N+H+ A+   +++  ++ V++G   +S+G+ 
Sbjct  705  LATQIGAMTLFATHYFELTELPNQLPHLANVHLDAVEHGDSIAFMHAVQEGAASKSYGLA  764

Query  830  VAELANFPKHVIECAKQKALELE  852
            VA LA  PK VI+ A+QK  +LE
Sbjct  765  VAGLAGVPKTVIKNARQKLSQLE  787


>gi|37680991|ref|NP_935600.1|  DNA mismatch repair protein [Vibrio vulnificus YJ016]
Length=884

 Score =  268 bits (686),  Expect = 5e-70
 Identities = 181/563 (32%), Positives = 296/563 (52%), Gaps = 44/563 (7%)

Query  302  LDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLN  361
            LD A  R L L Q     +    +LAA+L++C TP G R++ +WI QP+      E RL+
Sbjct  297  LDAATRRNLELTQNLAGGS--DNTLAAVLDRCATPMGSRMLKRWIHQPMRCITTREHRLD  354

Query  362  LVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQAL  421
             +    E A         ++++  D+ R+  +   ++A  +D  RL   + QLP + Q L
Sbjct  355  AIAELKEQALFSDI--HPVVKQIGDIERILARLALRSARPRDLARLRHAMQQLPELAQTL  412

Query  422  EKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQ--VENHEFLVKPSFDPNLS  479
                  H K L A    P+ D+        E++E  +  +   V     ++   +  +L 
Sbjct  413  SSLGNSHLKSL-ATAAAPMDDVC-------ELLERAIKENPPVVIRDGGVIAEGYSADLD  464

Query  480  ELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEE---------  530
            E R++ +     ++          G+D    +K+  +   G+Y +V+  +          
Sbjct  465  EWRDLADGATGYLEKLEEEERDRHGIDT---LKVGYNNVHGFYIQVSRGQSHLVPPHYVR  521

Query  531  -KVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYV  589
             + L+N + +   +++++  K  NSK  +L              +  + +E+ ++   ++
Sbjct  522  RQTLKNAERYIIPELKEHEDKVLNSKSKALAI------------EKQLWEELFDLLLPHL  569

Query  590  EPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIA  649
              +Q L   +AQLD + + A  ++   + Y RP + +     + + A RH  VE      
Sbjct  570  ARLQELAAAVAQLDVLQNLAERAD--TLDYCRPNLTKDPV--VHITAGRHPVVEQVTSDP  625

Query  650  FIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCIL  709
            FI N +     ++M  IITGPNMGGKSTY+RQT +I LMA IG +VP ESA +  +D I 
Sbjct  626  FIANPIELNSQRKML-IITGPNMGGKSTYMRQTALIALMAHIGSYVPAESATIGSIDRIF  684

Query  710  ARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEY  769
             R+GA D    G STFM EM ETA+IL +AT +SL+++DE+GRGTSTYDG  LAWA + +
Sbjct  685  TRIGASDDLASGRSTFMVEMTETANILHNATANSLVLMDEIGRGTSTYDGLSLAWASAHW  744

Query  770  IATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIH  829
            +AT+IGA  +FATH+ ELT L NQ+P + N+H+ A+   +++  ++ V++G   +S+G+ 
Sbjct  745  LATQIGAMTLFATHYFELTELPNQLPHLANVHLDAVEHGDSIAFMHAVQEGAASKSYGLA  804

Query  830  VAELANFPKHVIECAKQKALELE  852
            VA LA  PK VI+ A+QK  +LE
Sbjct  805  VAGLAGVPKTVIKNARQKLSQLE  827


>gi|88933293|ref|ZP_01138972.1|  MutS 1 protein [Dehalococcoides sp. BAV1]
Length=858

 Score =  268 bits (686),  Expect = 5e-70
 Identities = 230/847 (27%), Positives = 385/847 (45%), Gaps = 104/847 (12%)

Query  37   FDRGDFYTAHGEDALLAAREVFKTQGVIKYMGPAGAKNLQSVVLSKMNFESFVKDLLLVR  96
            F  GDFY    EDA +AARE                  L+ V+ S+   +     L  + 
Sbjct  25   FRLGDFYETFEEDARIAARE------------------LEIVLTSREMGKGLKVPLAGIP  66

Query  97   QYRVEVYKNRAGNKASKENDWYLAYK---------------ASPGNLSQFEDILFGNNDM  141
             + ++ Y +R  NK  K        K                +PG + +   +    N+ 
Sbjct  67   YHALDNYLSRLINKGYKVAICEQVTKPGETKGLVQRQVTRLVTPGTVVEPNLLQTKQNNF  126

Query  142  SASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKECVL  201
              S+ +          +   G+ + D    + G  +         LEA + ++ P E +L
Sbjct  127  LLSLYLT---------EDSCGLAFADISTSEFGCTQ----TNIGELEAEISRLSPAEIIL  173

Query  202  PGGETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQ---DLNRLLKGKKGEQMNSAVL  258
            P  ++                 +    KA  S  D Y    D+ R    +  E  N +  
Sbjct  174  PKNQSLN---------------LPIHLKATISKLDGYYFEADIAREHLLRHFECQNLSAY  218

Query  259  PEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLFQGSVE  318
                  +A+S+  A++ +LE     S      L+ +  + YM++D   +  L +F+ S  
Sbjct  219  GCENMPLAISAAGALLNYLEETQKSSLKQLERLSVYTTADYMQMDSHTLSNLEIFRSSGG  278

Query  319  DTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQE  378
            ++    SL  +L++ +T  G RL+ +++ QPL+ ++ IE+RL+ V+ F E++  R +L +
Sbjct  279  NSLKG-SLLGILDQTRTAMGGRLLRKFLGQPLLKQSDIEKRLSAVDYFFEESLARTSLAK  337

Query  379  DLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVFVT  438
             L  +  D+ R+A + +++    ++   L   +      + A+ +  G      LA F+ 
Sbjct  338  SL-GQIADMERMANRIRQKTILPRELISLKNSLE----TVSAIHRQFGLMPPPRLAYFLN  392

Query  439  PLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIMNDLEKKMQSTLIS  498
             L  L        + I  T D         +++  FDP + +L  +  D    +      
Sbjct  393  GLKPLPEMLDIINKTI--TDDPPSTLGDGKVIRAGFDPEMDKLCSLAGDARTFLSQMETR  450

Query  499  AARDLGLDPGKQIKLDSSAQFGYYFRVTCKE----------EKVLRNNKNFSTVDIQKNG  548
                 G+   K +KL  +  FGYY  ++             ++ L N + F T ++++  
Sbjct  451  ERERTGI---KSLKLGYNRVFGYYIEISNANLGDMPPEFIRKQTLVNAERFITPELKEYE  507

Query  549  VKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSF  608
                N+K   L              +  + ++++N   G+   +      LA LD + +F
Sbjct  508  NLILNAKERLLEM------------ETGLYEQVLNQLGGFYSALLANAAALAALDVLSAF  555

Query  609  AHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEI-AFIPNDVYFEKDKQMFHII  667
            A V+      YVRP      + R+ ++  RH  VE      +F+ ND+    +     I+
Sbjct  556  AEVA--VRNSYVRPVF--HPENRLDIRKGRHPMVEQGLGYGSFVANDISLSAEDCQIIIL  611

Query  668  TGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMA  727
            TGPNM GKSTY++QT +IVLMAQIG +VP E+AE+ + D I  R+GA +    G STFM 
Sbjct  612  TGPNMAGKSTYLKQTALIVLMAQIGSYVPAETAELCLTDRIFTRIGAREDLSAGQSTFMV  671

Query  728  EMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATK--IGAFCMFATHFH  785
            EM+ETASIL +AT  SL+I+DE+GRGTSTYDG  +A A+ EYI ++  + A  +FATH+H
Sbjct  672  EMVETASILNTATSRSLLILDEIGRGTSTYDGLAIAQAVVEYIHSQPSLTAKTLFATHYH  731

Query  786  ELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKHVIECAK  845
            EL  LA+ +P V N ++        +  L+++  G  D+S+GIHVA+LA  PK VI+ A 
Sbjct  732  ELVELASYLPRVKNYNIAVSEDRGEVVFLHKIVPGGVDKSYGIHVAKLAGLPKWVIKRAY  791

Query  846  QKALELE  852
            +   ELE
Sbjct  792  EVLTELE  798


>gi|55822041|ref|YP_140482.1|  DNA mismatch repair protein [Streptococcus thermophilus CNRZ1066]
Length=852

 Score =  267 bits (683),  Expect = 1e-69
 Identities = 196/623 (31%), Positives = 322/623 (51%), Gaps = 40/623 (6%)

Query  294  FDFSQYMKLDIAAVRALNLFQGSVEDTTGSQ--SLAALLNKCKTPQGQRLVNQWIKQPLM  351
            ++   Y+++  A   +L+L + +    TG +  SL  LL+K KT  G RL+  WI +PL+
Sbjct  244  YEIKDYLQMSYATKSSLDLLENA---RTGKKHGSLFWLLDKTKTAMGMRLLRTWIDRPLV  300

Query  352  DKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGI  411
            ++  I ER N+++ F+++   R  L E L   + D+ RLA +     AN +D  +L   +
Sbjct  301  NQASIIERQNIIQVFLDNFFERSDLAESLKGVY-DIERLASRVSFGKANPKDLIQLGHTL  359

Query  412  NQLPNVIQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVEN--HEFL  469
             Q+P +   LE         LL   +  L +L S       +I + +D D         +
Sbjct  360  AQVPVIKAILESFNDDALSGLLQE-LDALPELES-------LIRSAIDPDAPATITEGGI  411

Query  470  VKPSFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKE  529
            ++  FD  L + R++M++    +           G+     +K+D + + GYYF VT   
Sbjct  412  IRDGFDETLDKYRKVMSEGTSWIADIEAKEREASGITT---LKIDYNRKDGYYFHVTNSN  468

Query  530  EKVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYV  589
              ++ ++  F      KN  +F  ++L  +  E  + + +    +  I   +      Y+
Sbjct  469  LSLVPDH--FFRKATLKNSERFGTAELAKIEGEMLEAREKSSTLEYDIFMRVREQVERYI  526

Query  590  EPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVE-VQDEI  648
            + +Q+L   +A +D + S A  +      YVRP   +  + RI +   RHA VE V    
Sbjct  527  DRLQSLAKAIATVDVLQSLAVTAETNH--YVRPVFND--EHRIAIDRGRHAVVEKVMGVQ  582

Query  649  AFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCI  708
             +IPN + F+    +  +ITGPNM GKSTY+RQ  + V+MAQ+G +VP +S ++ + D I
Sbjct  583  EYIPNTITFDSQTNI-QLITGPNMSGKSTYMRQLALSVVMAQMGAYVPADSVDLPVFDAI  641

Query  709  LARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISE  768
              R+GA D  + G STFM EM+E    ++ AT +SLII DELGRGT+TYDG  LA +I E
Sbjct  642  YTRIGAADDLISGQSTFMVEMMEANQAIKRATPNSLIIFDELGRGTATYDGMALAQSIIE  701

Query  769  YIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGI  828
            +I  K+GA  MFATH+HELTAL+N +  + N+HV  L  +  +T L+++  G  D+S+GI
Sbjct  702  FIHDKVGAKTMFATHYHELTALSNSLTHLVNVHVATLEKDGEVTFLHKIVDGPADKSYGI  761

Query  829  HVAELANFPKHVIECAKQKALELEEFQYIGESQGYDIMEPAAKKCYLEREQGEKIIQEFL  888
            HVA++A  P  ++  A     +LE     GE+    +++P  K    E+   E  + E +
Sbjct  762  HVAKIAGLPTDLLNRADTILTQLE-----GETV---VIQPQEKVLSQEKPAIETHVNEQI  813

Query  889  SKVKQMPFTEMSEENITIKLKQL  911
            S      F + +E  +  +L+ L
Sbjct  814  SL-----FDDFTENPVLQELRDL  831


>gi|55820153|ref|YP_138595.1|  DNA mismatch repair protein [Streptococcus thermophilus LMG 18311]
Length=852

 Score =  267 bits (683),  Expect = 1e-69
 Identities = 196/623 (31%), Positives = 322/623 (51%), Gaps = 40/623 (6%)

Query  294  FDFSQYMKLDIAAVRALNLFQGSVEDTTGSQ--SLAALLNKCKTPQGQRLVNQWIKQPLM  351
            ++   Y+++  A   +L+L + +    TG +  SL  LL+K KT  G RL+  WI +PL+
Sbjct  244  YEIKDYLQMSYATKSSLDLLENA---RTGKKHGSLFWLLDKTKTAMGMRLLRTWIDRPLV  300

Query  352  DKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGI  411
            ++  I ER N+++ F+++   R  L E L   + D+ RLA +     AN +D  +L   +
Sbjct  301  NQASIIERQNIIQVFLDNFFERSDLTESLKGVY-DIERLASRVSFGKANPKDLIQLGHTL  359

Query  412  NQLPNVIQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVEN--HEFL  469
             Q+P +   LE         LL   +  L +L S       +I + +D D         +
Sbjct  360  AQVPVIKAILESFNDDALSGLLQE-LDALPELES-------LIRSAIDPDAPATITEGGI  411

Query  470  VKPSFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKE  529
            ++  FD  L + R++M++    +           G+     +K+D + + GYYF VT   
Sbjct  412  IRDGFDETLDKYRKVMSEGTSWIADIEAKEREASGITT---LKIDYNRKDGYYFHVTNSN  468

Query  530  EKVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYV  589
              ++ ++  F      KN  +F  ++L  +  E  + + +    +  I   +      Y+
Sbjct  469  LSLVPDH--FFRKATLKNSERFGTAELAKIEGEMLEAREKSSTLEYDIFMRVREQVERYI  526

Query  590  EPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVE-VQDEI  648
            + +Q+L   +A +D + S A  +      YVRP   +  + RI +   RHA VE V    
Sbjct  527  DRLQSLAKAIATVDVLQSLAVTAETNH--YVRPVFND--EHRIAIDRGRHAVVEKVMGVQ  582

Query  649  AFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCI  708
             +IPN + F+    +  +ITGPNM GKSTY+RQ  + V+MAQ+G +VP +S ++ + D I
Sbjct  583  EYIPNTITFDSQTNI-QLITGPNMSGKSTYMRQLALSVVMAQMGAYVPADSVDLPVFDAI  641

Query  709  LARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISE  768
              R+GA D  + G STFM EM+E    ++ AT +SLII DELGRGT+TYDG  LA +I E
Sbjct  642  YTRIGAADDLISGQSTFMVEMMEANQAIKRATPNSLIIFDELGRGTATYDGMALAQSIIE  701

Query  769  YIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGI  828
            +I  K+GA  MFATH+HELTAL+N +  + N+HV  L  +  +T L+++  G  D+S+GI
Sbjct  702  FIHDKVGAKTMFATHYHELTALSNSLTHLVNVHVATLEKDGEVTFLHKIVDGPADKSYGI  761

Query  829  HVAELANFPKHVIECAKQKALELEEFQYIGESQGYDIMEPAAKKCYLEREQGEKIIQEFL  888
            HVA++A  P  ++  A     +LE     GE+    +++P  K    E+   E  + E +
Sbjct  762  HVAKIAGLPTDLLNRADTILTQLE-----GETV---VIQPQEKVLSQEKPAIETHVNEQI  813

Query  889  SKVKQMPFTEMSEENITIKLKQL  911
            S      F + +E  +  +L+ L
Sbjct  814  SL-----FDDFTENPVLQELRDL  831


>gi|77408124|ref|ZP_00784870.1|  DNA mismatch repair protein MutS [Streptococcus agalactiae COH1]
Length=858

 Score =  267 bits (683),  Expect = 1e-69
 Identities = 205/696 (29%), Positives = 349/696 (50%), Gaps = 60/696 (8%)

Query  244  LLKGKKGEQMNSA-VLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKL  302
            LL   + E++N   ++ E    + +S+   +++++            ++  ++   Y+++
Sbjct  194  LLLSYEDERLNDIHLIDEQLTDLEISAAEKLLQYVHRTQKRELSHLQKVVHYEIKDYLQM  253

Query  303  DIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNL  362
              A   +L+L + +   +    SL  LL++ KT  G R++  WI +PL+  NRI+ER ++
Sbjct  254  SYATKNSLDLLENA-RTSKKHGSLYWLLDETKTAMGTRMLRTWIDRPLVSMNRIKERQDI  312

Query  363  VEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALE  422
            ++ F++    R  L E L   + D+ RLA +     AN +D  +L Q ++Q+P +     
Sbjct  313  IQVFLDYFFERNDLTESLKGVY-DIERLASRVSFGKANPKDLLQLGQTLSQIPRI-----  366

Query  423  KHEGKHQKLLLAVFVTPLTDLRSD----FSKFQEMIETTL--DMDQVENHEFLVKPSFDP  476
                   K++L  F  P  D+  +      + + +I T +  +         ++K  FD 
Sbjct  367  -------KMILQSFNQPELDIIVNKIDTMPELESLINTAIAPEAQATITEGNIIKSGFDK  419

Query  477  NLSELREIMN-------DLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKE  529
             L   R +M        D+E K +     AA  +G      +K+D + + GYYF VT   
Sbjct  420  QLDNYRTVMREGTGWIADIEAKER-----AASGIGT-----LKIDYNKKDGYYFHVTNSN  469

Query  530  EKVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYV  589
              ++   ++F      KN  ++  ++L  +  E  + + +    +  I   +      Y+
Sbjct  470  LSLVP--EHFFRKATLKNSERYGTAELAKIEGEMLEAREQSSNLEYDIFMRVRAQVESYI  527

Query  590  EPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVE-VQDEI  648
            + +Q L   +A +D + S A V+      YVRP   ++ Q  I +K  RHA VE V    
Sbjct  528  KRLQELAKTIATVDVLQSLAVVAENHH--YVRPKFNDEHQ--IKIKNGRHATVEKVMGVQ  583

Query  649  AFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCI  708
             +IPN +YF+    +  +ITGPNM GKSTY+RQ  + V+MAQ+G FV  +  ++ + D I
Sbjct  584  EYIPNSIYFDSQTDI-QLITGPNMSGKSTYMRQLALTVIMAQMGGFVSADEVDLPVFDAI  642

Query  709  LARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISE  768
              R+GA D  + G STFM EM+E    ++ A+  SLI+ DELGRGT+TYDG  LA +I E
Sbjct  643  FTRIGAADDLISGQSTFMVEMMEANQAVKRASDKSLILFDELGRGTATYDGMALAQSIIE  702

Query  769  YIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGI  828
            YI  ++ A  MFATH+HELT L+ Q+  + N+HV  L  +  +T L++++ G  D+S+GI
Sbjct  703  YIHDRVRAKTMFATHYHELTDLSEQLTRLVNVHVATLERDGEVTFLHKIEPGPADKSYGI  762

Query  829  HVAELANFPKHVIECAKQ--KALELEEFQYI----GESQGYDI---MEPAAKKCYL----  875
            HVA++A  P  +++ A      LE +  Q I     E+   D+   ++P  ++  L    
Sbjct  763  HVAKIAGLPIDLLDRATDILSQLEADAVQLIVSAPQEAVTADLNEELDPGKQQGQLSLFE  822

Query  876  EREQGEKIIQEFLSKVKQMPFTEMSEENITIKLKQL  911
            E     ++I+E L  +  M  T M   N    LK+L
Sbjct  823  EHSNAGRVIEE-LEAIDIMNLTPMQAMNAIFDLKKL  857


>gi|62528050|ref|ZP_00389310.1|  COG0249: Mismatch repair ATPase (MutS family) [Streptococcus 
thermophilus LMD-9]
Length=852

 Score =  267 bits (683),  Expect = 1e-69
 Identities = 196/623 (31%), Positives = 322/623 (51%), Gaps = 40/623 (6%)

Query  294  FDFSQYMKLDIAAVRALNLFQGSVEDTTGSQ--SLAALLNKCKTPQGQRLVNQWIKQPLM  351
            ++   Y+++  A   +L+L + +    TG +  SL  LL+K KT  G RL+  WI +PL+
Sbjct  244  YEIKDYLQMSYATKSSLDLLENA---RTGKKHGSLFWLLDKTKTAMGMRLLRTWIDRPLV  300

Query  352  DKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGI  411
            ++  I ER N+++ F+++   R  L E L   + D+ RLA +     AN +D  +L   +
Sbjct  301  NQASIIERQNIIQVFLDNFFERSDLTESLKGVY-DIERLASRVSFGKANPKDLIQLGHTL  359

Query  412  NQLPNVIQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVEN--HEFL  469
             Q+P +   LE         LL   +  L +L S       +I + +D D         +
Sbjct  360  AQVPIIKAILESFNDDALSGLLQE-LDALPELES-------LIRSAIDPDAPATITEGGI  411

Query  470  VKPSFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKE  529
            ++  FD  L + R++M++    +           G+     +K+D + + GYYF VT   
Sbjct  412  IRDGFDETLDKYRKVMSEGTSWIADIEAKEREASGITT---LKIDYNRKDGYYFHVTNSN  468

Query  530  EKVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYV  589
              ++ ++  F      KN  +F  ++L  +  E  + + +    +  I   +      Y+
Sbjct  469  LSLVPDH--FFRKATLKNSERFGTAELAKIEGEMLEAREKSSTLEYDIFMRVREQVERYI  526

Query  590  EPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVE-VQDEI  648
            + +Q+L   +A +D + S A  +      YVRP   +  + RI +   RHA VE V    
Sbjct  527  DRLQSLAKAIATVDVLQSLAVTAETNH--YVRPVFND--EHRIAIDRGRHAVVEKVMGVQ  582

Query  649  AFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCI  708
             +IPN + F+    +  +ITGPNM GKSTY+RQ  + V+MAQ+G +VP +S ++ + D I
Sbjct  583  EYIPNTITFDSQTNI-QLITGPNMSGKSTYMRQLALSVVMAQMGAYVPADSVDLPVFDAI  641

Query  709  LARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISE  768
              R+GA D  + G STFM EM+E    ++ AT +SLII DELGRGT+TYDG  LA +I E
Sbjct  642  YTRIGAADDLISGQSTFMVEMMEANQAIKRATPNSLIIFDELGRGTATYDGMALAQSIIE  701

Query  769  YIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGI  828
            +I  K+GA  MFATH+HELTAL+N +  + N+HV  L  +  +T L+++  G  D+S+GI
Sbjct  702  FIHDKVGAKTMFATHYHELTALSNSLTHLVNVHVATLEKDGEVTFLHKIVDGPADKSYGI  761

Query  829  HVAELANFPKHVIECAKQKALELEEFQYIGESQGYDIMEPAAKKCYLEREQGEKIIQEFL  888
            HVA++A  P  ++  A     +LE     GE+    +++P  K    E+   E  + E +
Sbjct  762  HVAKIAGLPTDLLNRADTILTQLE-----GETV---VIQPQEKVSSQEKPAIETHVNEQI  813

Query  889  SKVKQMPFTEMSEENITIKLKQL  911
            S      F + +E  +  +L+ L
Sbjct  814  SL-----FDDFTENPVLQELRDL  831


>gi|55379190|ref|YP_137040.1|  DNA mismatch repair protein [Haloarcula marismortui ATCC 43049]
Length=1022

 Score =  267 bits (682),  Expect = 1e-69
 Identities = 237/842 (28%), Positives = 391/842 (46%), Gaps = 66/842 (7%)

Query  18   GFVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMGPAGAKNLQS  77
            G V  F  + E     +     GDFY    EDA + A E+     V +      +  +  
Sbjct  107  GIVGEFLTLKEGTDADLLAMQCGDFYEFFAEDAEIVADEL--DLKVSQKSSHGSSYPMAG  164

Query  78   VVLSKMNFESFVKDLLLVRQYRVEVY-KNRAGNKASKENDWYLAYKASPGNLSQFEDILF  136
            V +  +    +V   L+ R YRV +  ++   N  ++E    +    +PG   +      
Sbjct  165  VPVDDLT--PYVS-ALVERGYRVAIADQHETENGHARE----ITRVVTPGTHLE------  211

Query  137  GNNDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGP  196
               D SA      V+ ++ D     G+   D    +  + +  D D    L  L    GP
Sbjct  212  -TGDESAQYLAAVVREASRDSGDTYGIAATDVTTGQFQVTQLDDADAGEALTELYT-FGP  269

Query  197  KECVLPGGETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLKGKKGEQMNSA  256
             E +LPG E   D   L ++ +R    +T    A F        +         EQ  S 
Sbjct  270  AE-ILPGPELRNDDEFLDRLRERTDAALTLHDSASFEPGRASHTVR--------EQFGSE  320

Query  257  VLPEM---ENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLF  313
             +  +   +  VAV +  AV+ ++E     +      L  +    ++ LD    R L L 
Sbjct  321  TVDSVGIGDQNVAVRAAGAVLSYVEDTGVGTLAAVTRLQAYGERDHVDLDATTQRNLELT  380

Query  314  QGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELR  373
            +    D++GS  L   ++   T  G RL+ QW+++P  ++  ++ R + V A  E A  R
Sbjct  381  ETMQGDSSGS--LFDTIDHTVTAAGGRLLQQWLQRPRRNRAELQRRQSCVAALSEAAMAR  438

Query  374  QTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLL  433
            + ++E L   + DL RLA +    +A+ +D   + + +  L  V  A+ + E   +    
Sbjct  439  ERIRETLSDAY-DLERLAARATSGSADARDLRAVQETLALLGQVADAVTETERLAE----  493

Query  434  AVFVTPLTDL-----RSDFSKFQEMIETTLDMDQ--VENHEFLVKPSFDPNLSELREIMN  486
                +PL D      R         +++ L  D         L K   D +L E   I++
Sbjct  494  ----SPLADALDGADREAADSLAAELDSALVADPPGTVRQGGLFKRGHDDDLDE---IID  546

Query  487  DLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQK  546
            + E  ++       R+        + +D +   GYY +V   E   +   + +  +   K
Sbjct  547  EHEAALEWLETLPDREKERTGITHLSVDRNKTDGYYIQVGKSETDAVP--EKYQHIKTLK  604

Query  547  NGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVV  606
            N  ++T  +L     +  + +    + +    + +    + +   +Q +   LA+LDA  
Sbjct  605  NSKRYTTPELDEKERDVLRLEERRHDMEYEHFQRLRARVAEHATLLQDVGRTLAELDAFA  664

Query  607  SFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYFEKDKQMFHI  666
            S A   +     + RPA+++  +  + ++A RH  VE   E  F+PND+Y + D+Q F I
Sbjct  665  SLA--VHAVENDWARPAVVDGNE--LSIEAGRHPVVEQTTE--FVPNDLYMDDDRQ-FLI  717

Query  667  ITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFM  726
            +TGPNM GKSTY+RQ  +I L+AQ+G FVP  SA V +VD I  RVGA D   +G STFM
Sbjct  718  VTGPNMSGKSTYMRQAALITLLAQVGSFVPARSATVGLVDGIFTRVGALDELAQGRSTFM  777

Query  727  AEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHE  786
             EM E ++IL SAT++SL+I+DE+GRGT+T+DG  +AWA +EYI   I +  +FATH+HE
Sbjct  778  VEMQELSNILHSATEESLVILDEVGRGTATFDGISIAWAATEYIVNSIQSKTLFATHYHE  837

Query  787  LTALANQIPTVNNLHV------taltteetltMLYQVKKGVCDQSFGIHVAELANFPKHV  840
            LTAL  ++PTV N+HV       +  ++  +T L  V+ G  D+S+G+HVA+LA  P+ V
Sbjct  838  LTALGEELPTVENVHVAVDGEPRSAGSDGDVTFLRTVRDGPTDRSYGVHVADLAGVPEPV  897

Query  841  IE  842
            ++
Sbjct  898  VD  899


>gi|78043130|ref|YP_360229.1|  DNA mismatch repair protein HexA [Carboxydothermus hydrogenoformans 
Z-2901]
Length=841

 Score =  267 bits (682),  Expect = 1e-69
 Identities = 213/712 (29%), Positives = 354/712 (49%), Gaps = 61/712 (8%)

Query  223  LITERKKADFSTKDIYQDLNRLLKGKKGEQMNSAVLPEMENQVAVSSLSAVIKFLELLSD  282
            ++ +  K +F  KDI   +N L K    E++  A      ++ A   L + +K +E  + 
Sbjct  174  VVLKNFKNNFLLKDITGIVNYLEK-LPAEEIEIAFKGPEASKEAYKILISYLKRIEP-AV  231

Query  283  DSNFGQFELTTFDFSQYMKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLV  342
             S FGQ E    D   Y+  D +  + L + +   ++   S SL  +++  +T  G R +
Sbjct  232  LSIFGQPEFYQID--SYLYFDESTRKNLEILRNREDN---SSSLLGIIDFTQTAMGARKL  286

Query  343  NQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQ  402
             + + +PL++   I +RL+ VE  V D ELR+ L+E+L   + DL RL+ K      N +
Sbjct  287  KEELTKPLLNLKAIADRLDAVEILVNDYELRENLRENLKNLY-DLERLSIKLVCGTINPK  345

Query  403  DCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQ  462
            D  ++ Q + Q+ ++  ++  +  K++ +L A     L ++R  ++   + I     +  
Sbjct  346  DLIKIKQSLPQIWHIKNSI--NHVKNKSVLFAEIYKNLPEMREVYNLIDKSIVDDPPVSP  403

Query  463  VENHEFLVKPSFDPNLSELRE--------IMNDLEKKMQSTLISAARDLGLDPGKQIKLD  514
             +    ++K  ++P + E R+        I+N  +K+ + T I           K +K++
Sbjct  404  KDGG--IIKNGYNPTVDEYRKAREEGQDWIINYEKKERERTGI-----------KSLKVN  450

Query  515  SSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQK-----NGVKFTNSKLTSLneeytknkte  569
             +  FGY+  VT       + N +    D Q+     N  +F   +L            +
Sbjct  451  YNKVFGYFIEVT-------KANLHLVPADYQRKQTMVNAERFITEELKHYENLILGASEK  503

Query  570  yeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQ  629
                +  +  EI +    Y E ++     +A LD ++S A  +      + RP I    +
Sbjct  504  LANLEYELFCEIRSEILKYQEDLKRAASAVALLDFLISLAVAA--IEYDFTRPVIT--AE  559

Query  630  GRIILKASRHACVEVQDEIA-FIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLM  688
              + +K  RH  VE     A F+PND+Y +  +    +ITGPNM GKSTY+RQ  +IV++
Sbjct  560  PVLEIKNGRHPVVEKSVGRANFVPNDLYLDTKENSLLLITGPNMAGKSTYMRQAALIVIL  619

Query  689  AQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIID  748
            AQIG FVP E A V +VD IL R+GA D   KG STFM EM+E  +ILR+AT  SLI++D
Sbjct  620  AQIGSFVPAEYARVGLVDKILTRIGATDDLAKGQSTFMVEMIECNNILRNATSRSLILLD  679

Query  749  ELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltte  808
            E+GRGTSTYDG  +A AI EYI  KI A  +F+TH+HELT L  +IP V N  V      
Sbjct  680  EVGRGTSTYDGISIAEAIIEYIQKKIKARTLFSTHYHELTGLEGEIPGVKNFTVLVQEKG  739

Query  809  etltMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEEFQYIGESQGYDIME-  867
            E +  L++V  G  D+S+GI+VA+LA  P+ V+E A +     E+       +G  + + 
Sbjct  740  EEVKFLHKVVPGKTDKSYGIYVAKLAGLPREVVERAYEILARFED-------KGLKVKDT  792

Query  868  -PAAKKCYLEREQGEKIIQEFLSKVKQMPFTEMSEENITIKLKQLKAEVIAK  918
             P     + E+ +   +I+E +    ++    M+      KL +L+ + + +
Sbjct  793  VPVQLSLFEEKPEPSGVIKELI----ELDLIRMTPLEALNKLYELRQKALGE  840


>gi|90580347|ref|ZP_01236154.1|  DNA mismatch repair protein [Vibrio angustum S14]
Length=859

 Score =  267 bits (682),  Expect = 1e-69
 Identities = 185/590 (31%), Positives = 307/590 (52%), Gaps = 58/590 (9%)

Query  302  LDIAAVRALNLFQ---GSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEE  358
            LD A  R L L Q   G  ++T     LAA+L++  TP G RL+ +W+ QP+ D+ ++  
Sbjct  268  LDAATRRNLELTQNLAGGYDNT-----LAAVLDQTATPMGSRLLKRWLHQPIRDQKQLNG  322

Query  359  RLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVI  418
            RL+ +EAF             +LR   DL R+  +   ++A  +D  R+   +  LP + 
Sbjct  323  RLDAIEAFKNSGMFVDV--SGVLRHMGDLERILARLALRSARPRDLARMRTAMQYLPELA  380

Query  419  QALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVK------P  472
            +           LL  +  T + DL +  +   E+ E  L+   +EN   +++      P
Sbjct  381  E-----------LLAEIPQTRINDLATHAAPMDELCEL-LEHAIIENPPVIIRDGGVLAP  428

Query  473  SFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEE--  530
             ++  L E R++ +   K ++    S      +D    +K+  +   G++ +V+  +   
Sbjct  429  GYNAELDEWRDLADGATKFLEELEASERERHDID---SLKVGFNQVHGFFIQVSRGQSHL  485

Query  531  --------KVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIV  582
                    + L+N + +   +++++  K  NSK  +L              +  + +E+ 
Sbjct  486  VPSHYVRRQTLKNAERYIIPELKEHEDKVLNSKSKALAL------------EKKLWEELF  533

Query  583  NISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACV  642
            +    ++E +Q     L++LD + + A  ++   + Y RP ++   +  I + A RH  V
Sbjct  534  DKLLPHLEQLQNAASALSELDVLTNLAERADS--LNYCRPELMT--ETGIEITAGRHPVV  589

Query  643  EVQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEV  702
            E      FI N +   +D++M  IITGPNMGGKSTY+RQT +I LMA +G FVP E+ ++
Sbjct  590  EHVLSEPFIANPISLHQDRRML-IITGPNMGGKSTYMRQTALIALMAHVGSFVPAEAVKI  648

Query  703  SIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGL  762
              +D I  R+GA D    G STFM EM ETA+IL +ATK SL+++DE+GRGTSTYDG  L
Sbjct  649  GPLDRIFTRIGASDDLASGRSTFMVEMTETANILHNATKQSLVLMDEIGRGTSTYDGLSL  708

Query  763  AWAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVC  822
            AWA +E++A KI A  +FATH+ ELT L + +  + N+H+ A+   + +  ++ V++G  
Sbjct  709  AWASAEWLADKISAMTLFATHYFELTELPSLLTGLANVHLDAVEHGDEIAFMHAVQEGAA  768

Query  823  DQSFGIHVAELANFPKHVIECAKQKALELEEFQYIGESQGYDIMEPAAKK  872
             +S+G+ VA LA  PK VI+ AK K  +LE   +    Q  +I   A K+
Sbjct  769  SKSYGLAVASLAGVPKAVIKRAKIKLQQLEASGHQQALQPNEITTGAPKE  818


>gi|89090493|ref|ZP_01163540.1|  MutS 1 protein [Lactobacillus reuteri JCM 1112]
Length=881

 Score =  267 bits (682),  Expect = 1e-69
 Identities = 197/614 (32%), Positives = 317/614 (51%), Gaps = 46/614 (7%)

Query  255  SAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLFQ  314
            S +  ++++Q     ++ ++ +L      S     +   +  S +MK+D  +   L L +
Sbjct  207  SYLTQDLDDQAQQHVVALLVSYLLTTQKRSLAHMQKAIAYQPSSFMKIDHYSKTNLELMR  266

Query  315  GSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQ  374
             ++       +LA LL++ KT  G RL+ +WI +PL+++N I ER + V+  ++    R 
Sbjct  267  -NMRSGKRQGTLAWLLDETKTAMGSRLLKRWIDRPLINQNAISERQDKVQELLDHYFERS  325

Query  375  TLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLA  434
             LQ++L++ + DL RLA +    + N +D  +L   + Q+P +   LE  +    + L  
Sbjct  326  NLQQELIKVY-DLERLAGRVAYGSVNGRDLIQLKTSLKQVPKIKYVLETLDSPVFEELQK  384

Query  435  VFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIMNDLEKKMQS  494
              + PL D+       Q +IE   +         ++K  ++  L + R+ MN+ ++ +  
Sbjct  385  Q-LDPLDDVADLID--QSIIE---EPPIAVTEGGVIKDGYNDQLDQYRDAMNNGKQWIVD  438

Query  495  TLISAARDLGLDPGKQIKLDSSAQFGYYFRVT-----------CKEEKVLRNNKNFSTVD  543
                  +  G++    +K+  +  FGYY  VT            + ++ L N + FST +
Sbjct  439  LQEHERKLTGIN---NLKIGYNHVFGYYIEVTKVNLDKLPKDRYERKQTLVNAERFSTPE  495

Query  544  IQKNG--VKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQ  601
            +++    +     K T+L               D  VK I     G +  +Q L   LA+
Sbjct  496  LKEKEALIMGAQEKSTALEY-------------DIFVK-IREQVKGQITRLQKLAQQLAE  541

Query  602  LDAVVSFAHVSNGAPVPYVRPAILEKGQGRII-LKASRHACVE-VQDEIAFIPNDVYFEK  659
            LD + SFA VS      +VRP   E   G ++ +K  RH  VE       ++PNDV   +
Sbjct  542  LDVLQSFAVVSED--YHFVRP---EMNTGHVLKIKDGRHPVVEKFMGHQEYVPNDVLMGE  596

Query  660  DKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQL  719
            D  +  +ITGPNM GKSTY+RQ  +I +MAQIGCFVP +SAE+ I D +  R+GA D  +
Sbjct  597  DTDIL-LITGPNMSGKSTYMRQLALIAVMAQIGCFVPAKSAELPIFDQVFTRIGAADDLI  655

Query  720  KGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCM  779
             G STFM EM+E  + L  AT  SLI+ DE+GRGT+TYDG  LA AI EY+   + A  +
Sbjct  656  SGESTFMVEMMEANNALTHATDRSLILFDEIGRGTATYDGMALAQAIIEYVHQHVRAKTL  715

Query  780  FATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKH  839
            F+TH+HELTAL N +  + N+HV A   +  L  L++V  G  D+S+GIHVA+LA  P  
Sbjct  716  FSTHYHELTALENSLARLKNVHVGATEKDGELVFLHKVSAGPADKSYGIHVAKLAGMPSS  775

Query  840  VIECAKQKALELEE  853
            +++ A     +LE+
Sbjct  776  LLKRADTILQKLEQ  789


>gi|16800508|ref|NP_470776.1|  DNA mismatch repair protein [Listeria innocua Clip11262]
Length=860

 Score =  266 bits (681),  Expect = 2e-69
 Identities = 203/660 (30%), Positives = 328/660 (49%), Gaps = 41/660 (6%)

Query  265  VAVSSLSAVIKFLELLSDDS--NFGQFELTT-FDFSQYMKLDIAAVRALNLFQGSVEDTT  321
            +++S   A+ K L  L +    + G  +    ++ S YMK+D  + R L L + S+    
Sbjct  216  MSLSEKRAIGKLLHYLKETQKRDLGHLQQAIHYETSNYMKMDYYSKRNLELAE-SIRGKG  274

Query  322  GSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLL  381
               +L  LL+  +T  G R++ QWI +PL+D+ +I ER + V   +     R  L E+L 
Sbjct  275  RQGTLLWLLDNTQTAMGGRMLKQWIDRPLIDRKQIIERQDDVSELMAHFFERLELVENLK  334

Query  382  RRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVFVTPLT  441
              + DL RLA +      N +D  +L   + Q+P +   L     K     L      L 
Sbjct  335  NVY-DLERLAGRVAYGNVNARDLIQLRNSLYQIPRIRATLLSMNSKS----LTALANQLD  389

Query  442  DLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIMNDLEKKMQSTLISAAR  501
                   K +E I  +  +   E    ++K  ++  L   R+   +  K   + L    R
Sbjct  390  PCEELTEKLEEAIVDSAPISIREGG--IIKDGYNSQLDTYRDASRN-GKTWIAELERKER  446

Query  502  DL-GLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLn  560
            +L G+   K +K+  +  FGYY  VT     +L   + +       N  ++   +L    
Sbjct  447  ELTGI---KTMKVGFNRVFGYYIEVTRANTHLLPEGR-YERKQTLANAERYITPELKEKE  502

Query  561  eeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYV  620
            +     + +  E +  +  E+  +   Y+E +Q L   ++++D + SFA +S      ++
Sbjct  503  KLILDAEEKSMELEYQLFTEVREMVKDYIERLQKLAKSVSEIDCLQSFADISEKNH--FI  560

Query  621  RPAILEKGQGRIILKASRHACVE-VQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYI  679
            RP + E G   + +K  RH  VE V    +++ ND   ++++++  +ITGPNM GKSTY+
Sbjct  561  RPTLSEDGS--LHVKQGRHPVVEKVMGAQSYVANDCDLDQNREIL-LITGPNMSGKSTYM  617

Query  680  RQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSA  739
            RQ  +  + AQ+GCFVP E A + I D I  R+GA D  + G STFM EMLE  + +  A
Sbjct  618  RQVALTAICAQVGCFVPAEEATLPIFDQIFTRIGAADDLIAGQSTFMVEMLEARNAIVHA  677

Query  740  TKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPTVNN  799
            TKDSLI+ DE+GRGT+TYDG  LA AI EYI   + A  +F+TH+HELT L  ++  + N
Sbjct  678  TKDSLILFDEIGRGTATYDGMALAQAIIEYIHENVHAKTLFSTHYHELTDLEKELRGLQN  737

Query  800  LHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEEFQYIGE  859
            +HV+A+     +  L+++K+G  D+S+GIHVAELA  PK +IE A +   +LE       
Sbjct  738  IHVSAVEENGKVVFLHKIKEGPADKSYGIHVAELAELPKSLIERASRILEQLESND----  793

Query  860  SQGYDIMEPAAKKCYLEREQGEKIIQEFLSKVKQMPFTEMSEENITIKLKQLKAEVIAKN  919
                       KK  + +++  + I E   +V+   F    EE  + K  +L  E+ A N
Sbjct  794  -----------KKIIITQDKQPEEIHE---EVQLSMFPVEPEEKASSKETKLLKEIAAMN  839


>gi|57866808|ref|YP_188445.1|  DNA mismatch repair protein [Staphylococcus epidermidis RP62A]
 gi|27467892|ref|NP_764529.1|  DNA mismatch repair protein [Staphylococcus epidermidis ATCC 
12228]
Length=873

 Score =  266 bits (681),  Expect = 2e-69
 Identities = 186/559 (33%), Positives = 294/559 (52%), Gaps = 21/559 (3%)

Query  290  ELTTFDFSQYMKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQP  349
            E+  +    YMK+D  A R L L + S+   +   +L  L+++ KTP G R + QWI +P
Sbjct  237  EVIEYAAVDYMKMDYYAKRNLELTE-SIRLKSKKGTLLWLMDETKTPMGARRLKQWIDRP  295

Query  350  LMDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQ  409
            L++K +I +RLN+VE F++    R TL+  L + + D+ RL  +      N +D  +L  
Sbjct  296  LINKQQINDRLNIVEEFMDRFIERDTLRNHLNQVY-DIERLVGRVSYGNVNARDLIQLKH  354

Query  410  GINQLPNVIQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEF-  468
             I+++P+ I+AL    G  Q       + PL DL       Q + E+ ++   +   +  
Sbjct  355  SISEIPH-IKALLNELGA-QTTTQFKELEPLDDL------LQILEESLVEEPPISIKDGG  406

Query  469  LVKPSFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCK  528
            L K  F+  L E  E   + +  +           G+   K +K+  +  FGY+  +T  
Sbjct  407  LFKNGFNAQLDEYLEASKNGKTWLAELQAKERERTGI---KSLKISFNKVFGYFIEITRA  463

Query  529  EEKVLRNNK-NFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSG  587
                 +     ++      N  +F   +L    +     + +  E +  +  ++      
Sbjct  464  NLNNFQPEAFGYNRKQTLSNAERFITDELKEKEDIILGAEDKAVELEYELFVKLREHIKT  523

Query  588  YVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVE-VQD  646
            Y E +Q    ++++LD + SFA ++      YV+P   +     + L+ SRH  VE V D
Sbjct  524  YTERLQKQAKIISELDCLQSFAEIAQ--KYNYVKPTFSDDKV--LHLENSRHPVVERVMD  579

Query  647  EIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVD  706
               ++PND + + D+   ++ITGPNM GKSTY+RQ  +I +MAQ+G +VPC+SA + I D
Sbjct  580  YNDYVPNDCHLD-DETFIYLITGPNMSGKSTYMRQVAIISIMAQMGAYVPCDSATLPIFD  638

Query  707  CILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAI  766
             I  R+GA D  + G STFM EMLE    L  AT++SLII DE+GRGTSTYDG  LA A+
Sbjct  639  QIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATENSLIIFDEIGRGTSTYDGLALAQAM  698

Query  767  SEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSF  826
             EY+A    A  +F+TH+HELT+L   +  + N+HV A   +  L  L++VK G  D S+
Sbjct  699  IEYVAQTSHAKTLFSTHYHELTSLDQMLKCLKNVHVAANEYQGELIFLHKVKDGAVDDSY  758

Query  827  GIHVAELANFPKHVIECAK  845
            GI VA+LA+ P  VI+ A+
Sbjct  759  GIQVAKLADLPNEVIDRAQ  777


>gi|75823717|ref|ZP_00753201.1|  COG0249: Mismatch repair ATPase (MutS family) [Vibrio cholerae 
RC385]
Length=879

 Score =  266 bits (681),  Expect = 2e-69
 Identities = 180/571 (31%), Positives = 298/571 (52%), Gaps = 52/571 (9%)

Query  298  QYMKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIE  357
            Q + LD A  R L L       T    +LA +L+ C TP G R++ +WI QP+ D   + 
Sbjct  287  QSVILDAATRRNLELTHNLAGGT--DNTLAEVLDHCATPMGSRMLKRWIHQPMRDNATLN  344

Query  358  ERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNV  417
            +RL+ +    E A   +     +L++  D+ R+  +   ++A  +D  RL   + QLP +
Sbjct  345  QRLDAITELKETALYGEL--HPVLKQIGDIERILARLALRSARPRDLARLRHAMQQLPEL  402

Query  418  IQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPS----  473
               + + +  H           LT+LR+      E+ +  L+    EN   +++      
Sbjct  403  HSVMSELKQPH-----------LTELRTHAEPMNELCDL-LERAIKENPPVVIRDGGVIA  450

Query  474  --FDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEE-  530
              +   L E R++ N   + ++          G+D    +K+  +   G+Y +V+  +  
Sbjct  451  DGYSAELDEWRDLANGATEFLERLEAEERDRHGIDT---LKVGYNNVHGFYIQVSRGQSH  507

Query  531  ---------KVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEI  581
                     + L+N + +   +++++  K  NSK  +L              +  + +E+
Sbjct  508  LVPPHYVRRQTLKNAERYIIEELKQHEDKVLNSKSRALAL------------EKQLWEEL  555

Query  582  VNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHAC  641
             ++   ++E +Q L   +AQLD + + A  +    + Y RP +++  +  I ++  RH  
Sbjct  556  FDLLLPHLEQLQQLAASVAQLDVLQNLAERAEN--LEYCRPTLVQ--EAGIHIQGGRHPV  611

Query  642  VEVQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAE  701
            VE      FI N +     ++M  IITGPNMGGKSTY+RQT +I LMA IG +VP ESA 
Sbjct  612  VERVMNEPFIANPIELNPQRRML-IITGPNMGGKSTYMRQTALIALMAHIGSYVPAESAS  670

Query  702  VSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFG  761
            +  +D I  R+GA D    G STFM EM ETA+IL +AT +SL+++DE+GRGTSTYDG  
Sbjct  671  IGPLDRIFTRIGASDDLASGRSTFMVEMTETANILHNATCNSLVLMDEIGRGTSTYDGLS  730

Query  762  LAWAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGV  821
            LAWA +E++A +IGA  +FATH+ ELT L N +P + N+H+ A+   + +  ++ V++G 
Sbjct  731  LAWASAEWLAKEIGAMTLFATHYFELTELPNVLPHLANVHLDAVEHGDGIAFMHAVQEGA  790

Query  822  CDQSFGIHVAELANFPKHVIECAKQKALELE  852
              +S+G+ VA LA  PK VI+ A+ K  +LE
Sbjct  791  ASKSYGLAVAGLAGVPKPVIKNARAKLQQLE  821


>gi|88944780|ref|ZP_01148004.1|  MutS 1 protein [Desulfotomaculum reducens MI-1]
Length=868

 Score =  266 bits (680),  Expect = 2e-69
 Identities = 243/876 (27%), Positives = 403/876 (46%), Gaps = 72/876 (8%)

Query  33   TVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMGPAGAKNLQSVVLSKMNF---ESFV  89
            T+  F  GDFY    EDA LA++E+  T      +    A   + V +  + F   +S++
Sbjct  20   TILFFRLGDFYEMFFEDAKLASQELEIT------LTGRDAGEPERVPMCGVPFHAADSYI  73

Query  90   KDLLLVRQYRVEVYKNRAGNKASKENDWYLAYKA-SPGNLSQFEDILFGNNDMSASIGVV  148
              L+  + Y+V + +     K +K        +  +PG L     +   +N+   +I   
Sbjct  74   SKLI-EKGYKVAICEQVEDPKVTKGIVKREVIRVITPGTLMDGSMLSEKDNNYLVAISQT  132

Query  149  GVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALL---IQIGPKECVLPGGE  205
                         G+   D      GL +  + +   +LE+LL   +++ P+E +L    
Sbjct  133  S--------SNNCGMAVADL---STGLFQVTEMEGHWSLESLLDEILRLTPREVLL----  177

Query  206  TAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLKGKKGEQMNSAVLPEMENQV  265
               D+ K  + +Q    L +        T+ +  D   LL  + G+++++      +++ 
Sbjct  178  -TPDLKKHEKTVQAFNFLPSTVFTTLEETQQV-SDYIELLNNQFGQKVSAVY----KDRP  231

Query  266  AVSSLSAVIKFLELLSDDSNFGQF-ELTTFDFSQYMKLDIAAVRALNLFQGSVEDTTGSQ  324
            AV   + ++    + +         E+T +    YM LD  A R L + + S+ D     
Sbjct  232  AVCMAAGILLQYLINTQKRQLNHITEITAYSPRAYMMLDGIARRNLEISK-SLRDGDKRG  290

Query  325  SLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRF  384
            +L  +L+  KT  G R++  W++QPL+D  +I+ERL+ VE  V    LR+ +    L++ 
Sbjct  291  TLLWVLDATKTAMGGRMLKNWLEQPLIDTLKIQERLDAVEELVNSILLREEIS-GALKQI  349

Query  385  PDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVFVTPLTDLR  444
             DL RLA +    +AN +D   L   + +LP +  AL        K +   F T L+DLR
Sbjct  350  YDLERLAARAAYGSANGRDMIALRGSLEKLPFIHDALAAVSSTRLKRIYTEFNT-LSDLR  408

Query  445  SDFSKFQEMIETTLDMDQVENHEF------LVKPSFDPNLSELREIMNDLEKKMQSTLIS  498
                         LD+   EN         L+K  FD  + +LR    D +  +      
Sbjct  409  K-----------VLDLALAENPPVSLRDGGLIKDGFDQEVDQLRNAARDGKTWLAGLEAR  457

Query  499  AARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTS  558
               + G+   K +K+  +  FGYY  VT     ++   + +       N  +F   +L  
Sbjct  458  EKENTGI---KNLKVGFNKVFGYYLEVTRANLSMVP--EYYQRRQTLANAERFITPELKE  512

Query  559  LneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVS--NGAP  616
                    +    E +  +   I    +  V  +Q    +L+++DA+VS A V+  NG  
Sbjct  513  YESMILGAEDRLVELEYNLFVAIRAKVAAEVSSIQKTAALLSEIDALVSLAEVAVRNG--  570

Query  617  VPYVRPAILEKGQGRIILKASRHACVE-VQDEIAFIPNDVYFEKDKQMFHIITGPNMGGK  675
              +VRP + + G   I +K  RH  VE  Q    F+PND Y +  ++   +ITGPNMGGK
Sbjct  571  --FVRPEVTDNGI--IEIKDGRHPVVENTQGLGGFVPNDTYLDIKEERLCLITGPNMGGK  626

Query  676  STYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASI  735
            STY RQ  +IVLMAQ+G FVP + A + IVD I ARVGA D    G STFM EM ET  I
Sbjct  627  STYQRQVALIVLMAQVGSFVPAQRARIGIVDRIFARVGASDDLTSGQSTFMVEMYETKQI  686

Query  736  LRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIP  795
            +  AT  SL+IIDELGRGTS  +G  +A ++ E++  ++G   +F+TH+HEL  L   + 
Sbjct  687  IDHATAKSLVIIDELGRGTSNLEGMAIAQSVIEFLHDEVGCRTLFSTHYHELAELEGLLR  746

Query  796  TVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEEFQ  855
             + N         + +  L +V +    +S+G+H A LA  P  +I  A +  ++LE  Q
Sbjct  747  GLKNYATAVKEQGDEVVFLRKVVRSKASKSYGVHCARLAGLPTSIIRRASELVMQLEFHQ  806

Query  856  YIGES--QGYDIMEPAAKKCYLEREQGEKIIQEFLS  889
               +    G   +  A+++  +   Q +++ +E L+
Sbjct  807  RAAQEVVAGKTQIAAASEQLAMFTPQEDQVKEEILA  842


>gi|85712118|ref|ZP_01043171.1|  DNA mismatch repair protein [Idiomarina baltica OS145]
Length=853

 Score =  266 bits (680),  Expect = 2e-69
 Identities = 178/565 (31%), Positives = 297/565 (52%), Gaps = 49/565 (8%)

Query  302  LDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLN  361
            LD A  R L L Q +  ++T    L A+L++     G R   +W+++PL D   + +R +
Sbjct  273  LDAATRRNLELNQSAHGEST---HLTAVLDETVCAMGSRNFQRWLQRPLRDHEILNQRYD  329

Query  362  LVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQAL  421
             VEA + D    +  +   L+   D+ R+  +   ++A  +D  RL   + +LP      
Sbjct  330  AVEALMTDDRYLELREH--LKAITDIERIVARIGLRSARPRDFARLRDSLARLP------  381

Query  422  EKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPS------FD  475
                    +L        L+ L    + F E+++  L+   +E    L++        +D
Sbjct  382  --------ELKADCGAPALSYLTQRIASFDELLDV-LNRAIIEQPPVLIRDGGVIASGYD  432

Query  476  PNLSELREI-------MNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCK  528
              L ELR++       +N LE++ +     ++  +G +      +++S   G    V  +
Sbjct  433  TELDELRDLATGATDYLNALEQRERERTGISSLKVGYNKVHGYFIETSKADGDQVPVEYQ  492

Query  529  EEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGY  588
              + L+N + +   +++ +  K   ++  SL              + A+   + +    +
Sbjct  493  RRQTLKNAERYIIPELKAHEDKVLTAQAKSLAR------------EKALYDGLYDHCLPF  540

Query  589  VEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEI  648
            V+ +Q     +A+LD + +FA ++      Y RPA++E+  G + L  +RH  +E   + 
Sbjct  541  VDGLQQSASAIAELDTLCAFATLA--VEQNYCRPALVEQS-GLLKLSQARHPVIERLSDE  597

Query  649  AFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCI  708
             FIPND+    DK+   +ITGPNMGGKSTY+RQ  +IV++A +GCFVP   AE+  VD I
Sbjct  598  PFIPNDLAMT-DKRRLLMITGPNMGGKSTYMRQAALIVILAHMGCFVPAREAEIGFVDRI  656

Query  709  LARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISE  768
              R+GA D    G STFM EM ETA+IL +AT +SL+++DE+GRGTSTYDG  LAW+++E
Sbjct  657  FTRIGASDDIASGRSTFMVEMTETANILHNATSESLVLMDEIGRGTSTYDGLSLAWSVAE  716

Query  769  YIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGI  828
             +A+K+    +FATH+ ELT LA ++    N+HV A    + +  L+ V +G  ++SFG+
Sbjct  717  QLASKLDCLTLFATHYFELTELAERLENSCNVHVEAQEHNDHIVFLHTVAEGSANRSFGL  776

Query  829  HVAELANFPKHVIECAKQKALELEE  853
             VA+LA  P +VIE AK+K  ELE+
Sbjct  777  QVAKLAGVPNNVIERAKRKLTELEQ  801


>gi|88604449|ref|YP_504627.1|  DNA mismatch repair protein MutS [Methanospirillum hungatei JF-1]
Length=892

 Score =  266 bits (679),  Expect = 3e-69
 Identities = 224/856 (26%), Positives = 392/856 (45%), Gaps = 55/856 (6%)

Query  5    PKETLQLESAAEVGFV-----RFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFK  59
            PKET Q   A + G +     +F+    + P   +  F  GDFY    EDA + ARE+  
Sbjct  7    PKETGQKGIAEKPGKITPAMQQFYDAKQQYPDCVI-FFRMGDFYETFCEDAQICARELDI  65

Query  60   TQGVIKYMGPAGAKNLQSVVLSKMNFESFVKDL--LLVRQYRVEVYKNRAGNKASKENDW  117
            T      M P G    Q + L+ + + +    L  ++ + Y+V + +     K +K    
Sbjct  66   TLTSRGRM-PDG----QDIPLAGVPYHAVDTYLSRMISKGYKVAICEQVEDPKKAKGIVK  120

Query  118  YLAYKA-SPGNLSQFEDILFGNNDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLC  176
                +  +PG +    D    + + +  +  V         +++VG+ ++D         
Sbjct  121  RAVVRVVTPGTVI---DAALLSTEQARYLMAVYPDQK----KKRVGLSFIDISTGDFQFT  173

Query  177  EFPDNDQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQIIQRGGILITERKKADFSTKD  236
            E P  D    + +   +  P EC++P G     +  L+ I+     L++ +  + F+   
Sbjct  174  EIPSQDMQDGIRSEAARYHPSECIIPAGAGEDLVRFLQSIVP----LVSSQDSSLFAKAS  229

Query  237  IYQDLNRLLKGKKGEQMNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDF  296
              + L R       E      LP         +  A + + +    DS      +   D 
Sbjct  230  AEEVLCRQFTISNPED-----LPCAGYVAGTIAAGAALAYAQKTQFDSLSHIRSVHRSDI  284

Query  297  SQYMKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRI  356
              ++ LD   +R L + Q ++ D T   +L A ++   TP G+RL+ + I  PL+D N I
Sbjct  285  GSHLVLDAVTLRNLEVLQ-NIRDRTEEGTLVATIDLTLTPMGRRLLRKRIAAPLLDPNVI  343

Query  357  EERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPN  416
              RL+ V  F++ + +R  ++  +  RFPDL R+A +     A+ +D   L    + +  
Sbjct  344  NRRLDAVSYFIDRSAVRHDVRTRI-HRFPDLERIAGRISYGNASPRDLVTLAAANDAVKR  402

Query  417  VIQALEKHEGKHQKLLLAVF----VTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKP  472
            +       +G   +L  A+     +TPL DL +     + +++   D   +     +++ 
Sbjct  403  LKTLFSTEDGIPDELSGAIAGIRDITPLADLIT-----RAIVQ---DPPALIRKGGVIQD  454

Query  473  SFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKV  532
             +   L  LR I  + ++ +           G+   K +K+  +A FGYY  +T  +  +
Sbjct  455  GYHEELDHLRTISRNGKQWIADLEQQEKERTGI---KSLKIKYNAVFGYYIEIT--KANL  509

Query  533  LRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPM  592
                 ++       NG ++T   L  +  +        +  ++ I ++I+  +S  V  +
Sbjct  510  ASVPDDYERRQTTANGERYTVPALREMESQIATADERLQSLEEEIFRDIIEKASQEVPAL  569

Query  593  QTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIP  652
            Q +   + ++D     A V+      YVRP +++  +  ++++  RH  VE      F+P
Sbjct  570  QEIAQAIGKIDLYAGLAEVA--LKNQYVRPELVD--EPTLLIRECRHPVVESSIGGGFVP  625

Query  653  NDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARV  712
            ND           IITG NM GKSTY+R   +I+++AQ+G FVP   A + +VD I  RV
Sbjct  626  NDAELSAGSDQILIITGANMAGKSTYMRSVALIIILAQMGSFVPATYARIGVVDRIFTRV  685

Query  713  GAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIAT  772
            GA D    G STFM EM+E A+IL  AT+ SL+I+DE+GRGTST DG+ +A A+ E++  
Sbjct  686  GAFDDLASGQSTFMVEMMELATILNHATEKSLVILDEIGRGTSTLDGYCIAKAVLEHLHG  745

Query  773  K--IGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHV  830
            K   G  C+FATHFHE+  +   +  V N H     T++ +  L ++  G  D+S+GIHV
Sbjct  746  KRSKGPRCLFATHFHEIVGIEADLKRVRNCHFAVKETDKDVIFLRKLVPGATDRSYGIHV  805

Query  831  AELANFPKHVIECAKQ  846
            A+LA  P  V+  +++
Sbjct  806  AQLAGVPASVVSRSEE  821


>gi|37524723|ref|NP_928067.1|  DNA mismatch repair protein [Photorhabdus luminescens subsp. 
laumondii TTO1]
Length=851

 Score =  266 bits (679),  Expect = 3e-69
 Identities = 185/570 (32%), Positives = 295/570 (51%), Gaps = 60/570 (10%)

Query  302  LDIAAVRALNLFQ---GSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEE  358
            +D A  R L L Q   GS ++T     LA++L+ C TP G R++ +W+  P+ D+  +E 
Sbjct  269  MDAATRRNLELTQNLSGSTDNT-----LASVLDLCVTPMGSRMLKRWLHAPVRDRQILEN  323

Query  359  RLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVI  418
            R   +       E+   LQ  LL+   DL R+  +   ++A  +D  R+     QLP++ 
Sbjct  324  RQQAIATL---QEIGLELQPFLLQ-IGDLERVLARLALRSARPRDLARMRHAFQQLPDIH  379

Query  419  QALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVK------P  472
            Q ++  +  + K            L+ +  +F E+ E  L+   VE    L++      P
Sbjct  380  QVMDSSDSPYIK-----------QLQKNIGRFDELQEL-LEKAIVETPPVLIRDGGVIAP  427

Query  473  SFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEE--  530
             ++  L E R + +     ++   I     LGLD    +K+  +   GYY +V+  +   
Sbjct  428  GYNSELDEWRTLADGASNYLEQLEIREREKLGLDT---LKVGFNGVHGYYIQVSRGQSHL  484

Query  531  --------KVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIV  582
                    + L+N + +   ++++   K   SK  SL              + A+ +E+ 
Sbjct  485  VPIHYVRRQTLKNAERYIIPELKEYEDKVLTSKGKSLAI------------EKALYEELF  532

Query  583  NISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACV  642
            ++   ++  +QT  + LA+LD + + A       + Y+ P + +K    I +   RH  V
Sbjct  533  DLLLPHLAELQTSAEALAELDVLANLAE--RAETLNYICPTLSDKPG--IQITGGRHPVV  588

Query  643  EVQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEV  702
            E      FI N +     +++  IITGPNMGGKSTY+RQ  +I L+A IG FVP E A +
Sbjct  589  EQVLREPFISNPLSLSSQRRLL-IITGPNMGGKSTYMRQAALITLLAYIGSFVPAEKAVI  647

Query  703  SIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGL  762
              VD I  RVGA D    G STFM EM ETA+IL +AT+ SL+++DE+GRGTSTYDG  L
Sbjct  648  GPVDRIFTRVGASDDLASGRSTFMVEMTETANILHNATEQSLVLMDEIGRGTSTYDGLSL  707

Query  763  AWAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVC  822
            AWA +E +A +I A  +FATH+ ELT L  ++  V N+H+ A+   +T+  ++ V++G  
Sbjct  708  AWACAENLANRIKAMTLFATHYFELTTLPEKLEGVVNIHLDAVEHGDTIAFMHSVQEGAA  767

Query  823  DQSFGIHVAELANFPKHVIECAKQKALELE  852
             +S+G+ VA LA  P+ VI+ A+QK  ELE
Sbjct  768  SKSYGLAVASLAGVPREVIKRARQKLKELE  797


>gi|75819256|ref|ZP_00749345.1|  COG0249: Mismatch repair ATPase (MutS family) [Vibrio cholerae 
V51]
Length=879

 Score =  266 bits (679),  Expect = 3e-69
 Identities = 179/571 (31%), Positives = 298/571 (52%), Gaps = 52/571 (9%)

Query  298  QYMKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIE  357
            Q + LD A  R L L       T    +LA +L+ C TP G R++ +WI QP+ D   + 
Sbjct  287  QSVILDAATRRNLELTHNLAGGT--DNTLAEVLDHCATPMGSRMLKRWIHQPMRDNATLN  344

Query  358  ERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNV  417
            +RL+ +    E A   +     +L++  D+ R+  +   ++A  +D  RL   + QLP +
Sbjct  345  QRLDAITELKETALYGEL--HPVLKQIGDIERILARLALRSARPRDLARLRHAMQQLPEL  402

Query  418  IQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPS----  473
               + + +  H           LT+LR+       + +  L+    EN   +++      
Sbjct  403  HSVMSELKQPH-----------LTELRTHAEPMDGLCDL-LERAIKENPPVVIRDGGVIA  450

Query  474  --FDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEE-  530
              +   L E R++ N   + ++          G+D    +K+  +   G+Y +V+  +  
Sbjct  451  DGYSAELDEWRDLANGATEFLERLEAEERDRHGIDT---LKVGYNNVHGFYIQVSRGQSH  507

Query  531  ---------KVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEI  581
                     + L+N + +   +++++  K  NSK  +L              +  + +E+
Sbjct  508  LVPPHYVRRQTLKNAERYIIEELKQHEDKVLNSKSRALAL------------EKQLWEEL  555

Query  582  VNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHAC  641
             ++   ++E +Q L   +AQLD + + A  +    + Y RP +++  +  I ++  RH  
Sbjct  556  FDLLLPHLEQLQQLAASVAQLDVLQNLAERAEN--LEYCRPTLVQ--EAGIHIQGGRHPV  611

Query  642  VEVQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAE  701
            VE      FI N +     ++M  IITGPNMGGKSTY+RQT +I LMA IG +VP ESA 
Sbjct  612  VERVMNEPFIANPIELNPQRRML-IITGPNMGGKSTYMRQTALIALMAHIGSYVPAESAS  670

Query  702  VSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFG  761
            +  +D I  R+GA D    G STFM EM ETA+IL +AT++SL+++DE+GRGTSTYDG  
Sbjct  671  IGPLDRIFTRIGASDDLASGRSTFMVEMTETANILHNATRNSLVLMDEIGRGTSTYDGLS  730

Query  762  LAWAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGV  821
            LAWA +E++A +IGA  +FATH+ ELT L N +P + N+H+ A+   + +  ++ V++G 
Sbjct  731  LAWASAEWLAKEIGAMTLFATHYFELTELPNVLPHLANVHLDAVEHGDGIAFMHAVQEGA  790

Query  822  CDQSFGIHVAELANFPKHVIECAKQKALELE  852
              +S+G+ VA LA  PK VI+ A+ K  +LE
Sbjct  791  ASKSYGLAVAGLAGVPKPVIKNARAKLQQLE  821


>gi|91792565|ref|YP_562216.1|  DNA mismatch repair protein MutS [Shewanella denitrificans OS217]
Length=862

 Score =  265 bits (678),  Expect = 4e-69
 Identities = 254/885 (28%), Positives = 408/885 (46%), Gaps = 75/885 (8%)

Query  40   GDFYTAHGEDALLAAREVFKTQGV-IKYMGPAGAKNLQSVVLSKMNFESFVKDLLLVRQY  98
            GDFY    EDA LA+  +    G+ +   G +G   +    L     E ++  L+ + Q 
Sbjct  36   GDFYELFYEDAKLASELL----GISLTARGKSGGDPIPMAGLPYHAVEGYLAKLVQIGQS  91

Query  99   RV--EVYKNRAGNKASKENDWYLAYKASPGNLSQFEDILFGNNDMSASIGVVGVKMSAVD  156
                E   + A +K   E    +    +PG L+  E +L  + D           + A  
Sbjct  92   VAICEQVGDPATSKGPVERK--VVRIVTPGTLTD-EALLQEHQD----------NLLAAI  138

Query  157  GQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQI  216
             Q +VG GY  ++    G     + D    LEA L +  P E +      + D   L  I
Sbjct  139  YQGKVGFGYA-TLDISSGRFVIAELDTQEALEAELQRTRPVELLY-----SEDFSNLSLI  192

Query  217  IQRGGILITERKKADFSTKDIYQDLNRLLKGKKGEQMNSAVLPEMENQVAVSSLSAVIKF  276
                GI      + DF T      +N LL     +Q  +  L       A  SL A    
Sbjct  193  NHLKGIRRRPEWEFDFDTS-----VNLLL-----QQFGTKDLHGFGISDARLSLQAAGCL  242

Query  277  LELLSDDSNFGQFELTT---FDFSQYMKLDIAAVRALNLFQ---GSVEDTTGSQSLAALL  330
            ++ + D        +     F+ +  + LD A  R L L Q   G  E T     LA +L
Sbjct  243  MQYVKDTQKTALPHINAIVRFNQADSIILDAATRRNLELTQNLSGGREHT-----LAWVL  297

Query  331  NKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRL  390
            +   TP G R++ +W+ QPL D N I  R N V   +E A L   L + L +   D+ R+
Sbjct  298  DNTATPMGSRMLQRWLHQPLRDNNIIASRHNAVAELIE-ANLFDELHQQL-KSLGDIERI  355

Query  391  AKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKF  450
              +   ++A  +D  RL Q ++ LP +   L    G+ +  LL    T L  L  +F   
Sbjct  356  MARLALRSARPRDFARLRQALSLLPELQHTL----GQCKTPLL----TKLAQLIGEFPAE  407

Query  451  QEMIETTL--DMDQVENHEFLVKPSFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPG  508
             E++E  +      +     +++  +   L E R +       +        +  G+   
Sbjct  408  HELLENAIVDSPPMLIRDGGVIRSGYHSELDEWRALSEGASDYLTELEAREKQATGIST-  466

Query  509  KQIKLDSSAQFGYYFRVT-CKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknk  567
              +K+  +   GYY  V+  + +KV  + +   T+   K   ++   +L    E+   ++
Sbjct  467  --LKVGYNRVHGYYIEVSRLQADKVPLSYQRRQTL---KGTERYITPELKVYEEKVLSSQ  521

Query  568  teyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEK  627
             +    +  +  ++ ++    +  ++   +  A+LD +  FA  +    + Y +P ++ K
Sbjct  522  GKALALEKQLWDQLFDLILPKLNELRDFANAAAELDVICCFAERAES--LHYTQPQMVSK  579

Query  628  GQGRIILKASRHACVEVQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVL  687
                I + A RH  VE     AFI N V  +  + M  I+TGPNMGGKSTY+RQ  +I L
Sbjct  580  TG--IQINAGRHPVVERVSSTAFIANPVNLDAKRHML-IVTGPNMGGKSTYMRQVALISL  636

Query  688  MAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIII  747
            MA IGCFVP +SA +  +D I  R+GA D    G STFM EM ETA+IL +AT  SL+++
Sbjct  637  MAHIGCFVPADSAVIGPIDRIFTRIGASDDLASGRSTFMVEMTETANILHNATSQSLVLM  696

Query  748  DELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltt  807
            DE+GRGTSTYDG  LAW+ +EY+A +I A  +FATH+ ELT L + IP  NN+H+ A+  
Sbjct  697  DEIGRGTSTYDGLSLAWSAAEYLALQIKAMTLFATHYFELTQLPDLIPGANNVHLDAIEH  756

Query  808  eetltMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEEFQYIGESQGYDIME  867
            ++T+  ++ V++G   +S+G+ VA LA  P HVI+ AK K  +LE      ++Q    + 
Sbjct  757  DDTIAFMHAVQEGAASKSYGLQVAALAGVPSHVIQAAKHKLHQLES----RDNQASPAVA  812

Query  868  PAAKKCYLEREQGEKIIQEFLSKVKQMPFTEMSEENITIKLKQLK  912
             A ++  L       + ++ L+K+  +   E+S +     L +LK
Sbjct  813  SAPQQQSLSLSPAPMMGEKALNKLTTINPDELSPKQALDLLYELK  857


>gi|68249283|ref|YP_248395.1|  DNA mismatch repair protein [Haemophilus influenzae 86-028NP]
Length=861

 Score =  265 bits (678),  Expect = 4e-69
 Identities = 196/636 (30%), Positives = 327/636 (51%), Gaps = 62/636 (9%)

Query  300  MKLDIAAVRALNLFQ---GSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRI  356
            ++LD A  R L L Q   G  E+T     LA++L+KC TP G RL+ +WI QP+ D  ++
Sbjct  267  IQLDAATRRNLELTQNLSGGTENT-----LASVLDKCVTPMGSRLLKRWIHQPIRDVEKL  321

Query  357  EERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPN  416
            ++R   + A + + +L   LQ   L+   D+ R+  +   ++A  +D  RL   + Q+P 
Sbjct  322  KQRQQAI-AEILNFDLVDELQP-YLQLVGDMERILARVALRSARPRDLTRLRTALEQIPA  379

Query  417  VIQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPS---  473
            +   +++            F+T L    +DFS+  ++++  L    +E    L++     
Sbjct  380  LRTIVQQKTSP--------FLTALFSQIADFSEQWDLLQRAL----IETPPLLIRDGGVI  427

Query  474  ---FDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKE-  529
               +   L E R + +   + +++         G+D    +K+  +A  GYY +++  + 
Sbjct  428  AEGYHAELDEWRMLSDGATQYLENLEKRERESTGIDT---LKIGFNAVHGYYIQISQGQA  484

Query  530  ---------EKVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKE  580
                      + L+N + +   ++++   K   SK  +L              +  +  E
Sbjct  485  HKAPIHYVRRQTLKNAERYIIPELKEYEDKVLKSKGAALAL------------EKQLYDE  532

Query  581  IVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHA  640
            + ++   ++  +Q  +  L++LD +V+ A  ++   + YV P   ++   +I  +  RH 
Sbjct  533  LFDLLLPHLGSLQLASLALSELDVLVNLAECAD--TLNYVMPTFCDEVSVKI--ENGRHP  588

Query  641  CVEVQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESA  700
             VE   +  FI N V    ++ +  IITGPNMGGKSTY+RQT +I L+A IG FVP +SA
Sbjct  589  VVEQVLKDPFIANPVELNHNRHLL-IITGPNMGGKSTYMRQTALITLLAYIGSFVPADSA  647

Query  701  EVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGF  760
             +  +D I  R+GA D    G STFM EM E A+IL  AT+ SL++IDE+GRGTSTYDG 
Sbjct  648  RIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATEQSLVLIDEIGRGTSTYDGL  707

Query  761  GLAWAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKG  820
             LAWA +E++A KI +  +FATH+ ELTAL  Q+  + N+H+ AL    ++  ++ V+ G
Sbjct  708  SLAWACAEWLAKKIRSLTLFATHYFELTALPEQLEGIANIHLDALEHNNSIAFMHAVQDG  767

Query  821  VCDQSFGIHVAELANFPKHVIECAKQKALELEE-FQYIGESQGYDIMEPAAKKCYLEREQ  879
               +S+G+ VA LA  P+ VI+ AKQK  +LE+   Y  E Q   + E    +  L  EQ
Sbjct  768  AASKSYGLAVAALAGVPQSVIKLAKQKLTQLEKNSSYSAEQQIQALREANHNQGELLFEQ  827

Query  880  GEKIIQEFLSKVKQMPFTEMSEENITIKLKQLKAEV  915
                ++E + K+      ++S +     L QLK  V
Sbjct  828  ETDALREAIEKLDP---DDLSPKQALAYLYQLKKMV  860


>gi|92089830|ref|ZP_01274757.1|  MutS 1 protein [Lactobacillus reuteri 100-23]
Length=881

 Score =  265 bits (678),  Expect = 4e-69
 Identities = 195/614 (31%), Positives = 317/614 (51%), Gaps = 46/614 (7%)

Query  255  SAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLFQ  314
            S ++ ++++Q     ++ ++ +L      S     +   +  S +MK+D  +   L L  
Sbjct  207  SYLIQDLDDQAQQHVVALLVSYLLTTQKRSLAHLQKAIAYQPSSFMKIDHYSKTNLELMH  266

Query  315  GSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQ  374
             ++       +LA LL++ KT  G RL+ +WI +PL+++N I ER + V+  ++    R 
Sbjct  267  -NMRSGKRQGTLAWLLDETKTAMGSRLLKRWIDRPLINQNAISERQDKVQELLDHYFERS  325

Query  375  TLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLA  434
             LQ++L++ + DL RLA +    + N +D  +L   + Q+P +   LE  +    + L  
Sbjct  326  NLQQELIKVY-DLERLAGRVAYGSVNGRDLIQLKTSLKQVPKIKYVLETLDSPVFEELQK  384

Query  435  VFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIMNDLEKKMQS  494
              + PL D+       Q ++E   +         ++K  ++  L + R+ MN+ ++ +  
Sbjct  385  Q-LDPLDDVADLID--QSIVE---EPPIAVTEGGIIKDGYNDQLDQYRDAMNNGKQWIAD  438

Query  495  TLISAARDLGLDPGKQIKLDSSAQFGYYFRVT-----------CKEEKVLRNNKNFSTVD  543
                  +  G++    +K+  +  FGYY  VT            + ++ L N + FST +
Sbjct  439  LQEHERKLTGIN---NLKIGYNHVFGYYIEVTKVNLDKLPKDRYERKQTLVNAERFSTPE  495

Query  544  IQKNG--VKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQ  601
            +++    +     K T+L               D  VK I     G +  +Q L   LA+
Sbjct  496  LKEKEALIMGAQEKSTALEY-------------DIFVK-IREQVKGQITRLQKLAQQLAE  541

Query  602  LDAVVSFAHVSNGAPVPYVRPAILEKGQGRII-LKASRHACVE-VQDEIAFIPNDVYFEK  659
            LD + SFA VS      +VRP   E   G ++ +K  RH  VE       ++PNDV   +
Sbjct  542  LDVLQSFAVVSED--YHFVRP---EMNTGHVLKIKDGRHPVVEKFMGHQEYVPNDVLMGE  596

Query  660  DKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQL  719
            D  +  +ITGPNM GKSTY+RQ  +I +MAQIGCFVP +SAE+ I D +  R+GA D  +
Sbjct  597  DTDIL-LITGPNMSGKSTYMRQLALIAVMAQIGCFVPAKSAELPIFDQVFTRIGAADDLI  655

Query  720  KGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCM  779
             G STFM EM+E  + L  AT  SLI+ DE+GRGT+TYDG  LA AI EY+   + A  +
Sbjct  656  SGESTFMVEMMEANNALTHATDRSLILFDEIGRGTATYDGMALAQAIIEYVHQHVRAKTL  715

Query  780  FATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKH  839
            F+TH+HELTAL + +  + N+HV A   +  L  L++V  G  D+S+GIHVA+LA  P  
Sbjct  716  FSTHYHELTALESSLARLKNVHVGATEKDGELVFLHKVSAGPADKSYGIHVAKLAGMPSS  775

Query  840  VIECAKQKALELEE  853
            +++ A     +LE+
Sbjct  776  LLKRADTILQKLEQ  789


>gi|49483458|ref|YP_040682.1|  DNA mismatch repair protein [Staphylococcus aureus subsp. aureus 
MRSA252]
Length=872

 Score =  265 bits (677),  Expect = 5e-69
 Identities = 196/625 (31%), Positives = 312/625 (49%), Gaps = 33/625 (5%)

Query  299  YMKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEE  358
            YMK+D  A R L L + S+   +   +L  L+++ KTP G R + QWI +PL+ K +IE 
Sbjct  247  YMKMDFYAKRNLELTE-SIRLKSKKGTLLWLMDETKTPMGARRLKQWIDRPLISKEQIEA  305

Query  359  RLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVI  418
            RL++V+ F      R TL+   L +  D+ RL  +      N +D  +L   I+++PN+ 
Sbjct  306  RLDIVDEFSAHFIERDTLRT-YLNQVYDIERLVGRVSYGNVNARDLIQLKHSISEIPNIK  364

Query  419  QALEKHEGKHQKLLLAVF-VTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPN  477
              L      +Q  L+ V  + PL DL       Q ++E   +         L K  F+  
Sbjct  365  ALLNS---MNQDTLVQVNQLEPLDDLLDILE--QSLVE---EPPISVKDGGLFKVGFNMQ  416

Query  478  LSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNK  537
            L E  E   + +  +        +  G+   K +K+  +  FGY+  +T    +    ++
Sbjct  417  LDEYLEASKNGKTWLAELQAKERQRTGI---KSLKISFNKVFGYFIEITRANLQNFEPSE  473

Query  538  -NFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLN  596
              +       N  +F   +L    +     + +  E +  +  ++      Y E +Q   
Sbjct  474  FGYMRKQTLSNAERFITDELKEKEDIILGAEDKAIELEYQLFVQLREEVKKYTERLQHQA  533

Query  597  DVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVE-VQDEIAFIPNDV  655
             ++++LD + SFA ++      Y RP+  E     ++   SRH  VE V D   ++PN+ 
Sbjct  534  KIISELDCLQSFAEIAQ--KYNYTRPSFSENKTLELV--ESRHPVVERVMDYNDYVPNNC  589

Query  656  YFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAG  715
              + +    ++ITGPNM GKSTY+RQ  +I +MAQ+G +VPC+ A + I D I  R+GA 
Sbjct  590  RLDNET-FIYLITGPNMSGKSTYMRQVAIISIMAQMGAYVPCKEAVLPIFDQIFTRIGAA  648

Query  716  DSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIG  775
            D  + G STFM EMLE    L  AT+DSLII DE+GRGTSTYDG  LA A+ EY+A    
Sbjct  649  DDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDEIGRGTSTYDGLALAQAMIEYVAETSH  708

Query  776  AFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELAN  835
            A  +F+TH+HELT L   +P++ N+HV A   +  L  L++VK G  D S+GI VA+LA+
Sbjct  709  AKTLFSTHYHELTTLDQALPSLKNVHVAANEYKGELIFLHKVKDGAVDDSYGIQVAKLAD  768

Query  836  FPKHVIECAKQKALELEEFQ-YIGESQGYDIMEPAAKKCYLEREQGEKIIQEFLSKVKQM  894
             P+ VI  A+   + L EF+   G+      ++    +  + +E     ++E    + Q 
Sbjct  769  LPEKVISRAQ---VILSEFEASAGKKSSISNLKMVENEPEINQENSNLSVEETTDTLSQK  825

Query  895  PFTEMS--------EENITIKLKQL  911
             F + S        E  I +++K L
Sbjct  826  DFEQASFDLFENDQESEIELQIKNL  850


>gi|15926878|ref|NP_374411.1|  DNA mismatch repair protein [Staphylococcus aureus subsp. aureus 
N315]
 gi|57634628|ref|NP_371819.2|  DNA mismatch repair protein [Staphylococcus aureus subsp. aureus 
Mu50]
 gi|57651865|ref|YP_186171.1|  DNA mismatch repair protein [Staphylococcus aureus subsp. aureus 
COL]
 gi|90586599|ref|ZP_01242293.1|  MutS 1 protein [Staphylococcus aureus subsp. aureus JH9]
 gi|90583479|ref|ZP_01239235.1|  MutS 1 protein [Staphylococcus aureus subsp. aureus JH1]
 gi|49486134|ref|YP_043355.1|  DNA mismatch repair protein [Staphylococcus aureus subsp. aureus 
MSSA476]
 gi|21282907|ref|NP_645995.1|  DNA mismatch repair protein [Staphylococcus aureus subsp. aureus 
MW2]
Length=872

 Score =  265 bits (676),  Expect = 7e-69
 Identities = 196/625 (31%), Positives = 312/625 (49%), Gaps = 33/625 (5%)

Query  299  YMKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEE  358
            YMK+D  A R L L + S+   +   +L  L+++ KTP G R + QWI +PL+ K +IE 
Sbjct  247  YMKMDFYAKRNLELTE-SIRLKSKKGTLLWLMDETKTPMGARRLKQWIDRPLISKEQIEA  305

Query  359  RLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVI  418
            RL++V+ F      R TL+   L +  D+ RL  +      N +D  +L   I+++PN+ 
Sbjct  306  RLDIVDEFSAHFIERDTLRT-YLNQVYDIERLVGRVSYGNVNARDLIQLKHSISEIPNIK  364

Query  419  QALEKHEGKHQKLLLAVF-VTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPN  477
              L      +Q  L+ V  + PL DL       Q ++E   +         L K  F+  
Sbjct  365  ALLNS---MNQNTLVQVNQLEPLDDLLDILE--QSLVE---EPPISVKDGGLFKVGFNTQ  416

Query  478  LSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNK  537
            L E  E   + +  +        +  G+   K +K+  +  FGY+  +T    +    ++
Sbjct  417  LDEYLEASKNGKTWLAELQAKERQRTGI---KSLKISFNKVFGYFIEITRANLQNFEPSE  473

Query  538  -NFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLN  596
              +       N  +F   +L    +     + +  E +  +  ++      Y E +Q   
Sbjct  474  FGYMRKQTLSNAERFITDELKEKEDIILGAEDKAIELEYQLFVQLREEVKKYTERLQQQA  533

Query  597  DVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVE-VQDEIAFIPNDV  655
             ++++LD + SFA ++      Y RP+  E     ++   SRH  VE V D   ++PN+ 
Sbjct  534  KIISELDCLQSFAEIAQ--KYNYTRPSFSENKTLELV--ESRHPVVERVMDYNDYVPNNC  589

Query  656  YFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAG  715
              + +    ++ITGPNM GKSTY+RQ  +I +MAQ+G +VPC+ A + I D I  R+GA 
Sbjct  590  RLDNET-FIYLITGPNMSGKSTYMRQVAIISIMAQMGAYVPCKEAVLPIFDQIFTRIGAA  648

Query  716  DSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIG  775
            D  + G STFM EMLE    L  AT+DSLII DE+GRGTSTYDG  LA A+ EY+A    
Sbjct  649  DDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDEIGRGTSTYDGLALAQAMIEYVAETSH  708

Query  776  AFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELAN  835
            A  +F+TH+HELT L   +P++ N+HV A   +  L  L++VK G  D S+GI VA+LA+
Sbjct  709  AKTLFSTHYHELTTLDQALPSLKNVHVAANEYKGELIFLHKVKDGAVDDSYGIQVAKLAD  768

Query  836  FPKHVIECAKQKALELEEFQ-YIGESQGYDIMEPAAKKCYLEREQGEKIIQEFLSKVKQM  894
             P+ VI  A+   + L EF+   G+      ++    +  + +E     ++E    + Q 
Sbjct  769  LPEKVISRAQ---VILSEFEASAGKKSSISNLKMVENEPEINQENLNLSVEETTDTLSQK  825

Query  895  PFTEMS--------EENITIKLKQL  911
             F + S        E  I +++K L
Sbjct  826  DFEQASFDLFENDQESEIELQIKNL  850


>gi|73662774|ref|YP_301555.1|  DNA mismatch repair protein [Staphylococcus saprophyticus subsp. 
saprophyticus ATCC 15305]
Length=887

 Score =  265 bits (676),  Expect = 7e-69
 Identities = 185/552 (33%), Positives = 282/552 (51%), Gaps = 21/552 (3%)

Query  293  TFDFSQYMKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMD  352
            T++   +MK+D  A R L L + S+   +   +L  L+++ KTP G R + QWI +PL+ 
Sbjct  241  TYEAVDFMKMDFYAKRNLELTE-SIRLKSKKGTLLWLMDETKTPMGARRLKQWIDRPLIQ  299

Query  353  KNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGIN  412
            K +IE RL+ V+ F+     R TL+   L +  D+ RL  +      N +D  +L   I+
Sbjct  300  KKQIESRLDTVDQFINHFIERDTLR-GYLNQVYDIERLVGRVSYGNVNARDLIQLKHSIS  358

Query  413  QLPNVIQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKP  472
            ++PN+   L+  + +      A+   PL DL    +  +E ++    +   E   F  K 
Sbjct  359  EIPNIKNLLQAFDEQMTAQFEAL--EPLDDL---LNLLEESLKEEPPISVKEGGLF--KT  411

Query  473  SFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKV  532
             F+  L    E   + +  +        +  G+   K +K+  +  FGY+  +T    + 
Sbjct  412  GFNETLDSYLEASKNGKNWLAELQTKERQRTGI---KSLKISFNKVFGYFIEITRANLQG  468

Query  533  LRNNK-NFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEP  591
                +  +       N  +F   +L    +     + +  E +  +  ++      Y E 
Sbjct  469  FDPTEFGYHRKQTLSNAERFITDELKEKEDIILGAEDKAIELEYQLFVQLREQIKAYTER  528

Query  592  MQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVE-VQDEIAF  650
            +Q    V+++LD + SFA ++      Y RP   E     + L  SRH  VE V D   +
Sbjct  529  LQKQAKVISELDCLQSFAEIAQ--KYNYARPTFSE--DKTLELVNSRHPVVERVMDHNDY  584

Query  651  IPNDVYFEKDKQMF-HIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCIL  709
            +PND   E DK+ F ++ITGPNM GKSTY+RQ  +I +MAQ+G +VPCESA + + D I 
Sbjct  585  VPNDC--ELDKETFIYLITGPNMSGKSTYMRQVAIISIMAQMGAYVPCESAILPVFDQIF  642

Query  710  ARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEY  769
             R+GA D  + G STFM EMLE    L  AT+ SLII DE+GRGTSTYDG  LA A+ EY
Sbjct  643  TRIGAADDLVSGKSTFMVEMLEAQKALAHATEHSLIIFDEIGRGTSTYDGLALAQAMIEY  702

Query  770  IATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIH  829
            +A    A  +F+TH+HELT L   +  + N+HV A      L  L++VK G  D S+GI 
Sbjct  703  VAHTSHAKTLFSTHYHELTTLDQSLACLKNVHVAANEYNGELIFLHKVKDGAVDDSYGIQ  762

Query  830  VAELANFPKHVI  841
            VA+LA+ P  VI
Sbjct  763  VAKLAHLPVEVI  774


>gi|87160655|ref|YP_493885.1|  DNA mismatch repair protein mutS [Staphylococcus aureus subsp. 
aureus USA300]
Length=840

 Score =  265 bits (676),  Expect = 7e-69
 Identities = 196/625 (31%), Positives = 312/625 (49%), Gaps = 33/625 (5%)

Query  299  YMKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEE  358
            YMK+D  A R L L + S+   +   +L  L+++ KTP G R + QWI +PL+ K +IE 
Sbjct  215  YMKMDFYAKRNLELTE-SIRLKSKKGTLLWLMDETKTPMGARRLKQWIDRPLISKEQIEA  273

Query  359  RLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVI  418
            RL++V+ F      R TL+   L +  D+ RL  +      N +D  +L   I+++PN+ 
Sbjct  274  RLDIVDEFSAHFIERDTLRT-YLNQVYDIERLVGRVSYGNVNARDLIQLKHSISEIPNIK  332

Query  419  QALEKHEGKHQKLLLAVF-VTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPN  477
              L      +Q  L+ V  + PL DL       Q ++E   +         L K  F+  
Sbjct  333  ALLNS---MNQNTLVQVNQLEPLDDLLDILE--QSLVE---EPPISVKDGGLFKVGFNTQ  384

Query  478  LSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNK  537
            L E  E   + +  +        +  G+   K +K+  +  FGY+  +T    +    ++
Sbjct  385  LDEYLEASKNGKTWLAELQAKERQRTGI---KSLKISFNKVFGYFIEITRANLQNFEPSE  441

Query  538  -NFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLN  596
              +       N  +F   +L    +     + +  E +  +  ++      Y E +Q   
Sbjct  442  FGYMRKQTLSNAERFITDELKEKEDIILGAEDKAIELEYQLFVQLREEVKKYTERLQQQA  501

Query  597  DVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVE-VQDEIAFIPNDV  655
             ++++LD + SFA ++      Y RP+  E     ++   SRH  VE V D   ++PN+ 
Sbjct  502  KIISELDCLQSFAEIAQ--KYNYTRPSFSENKTLELV--ESRHPVVERVMDYNDYVPNNC  557

Query  656  YFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAG  715
              + +    ++ITGPNM GKSTY+RQ  +I +MAQ+G +VPC+ A + I D I  R+GA 
Sbjct  558  RLDNET-FIYLITGPNMSGKSTYMRQVAIISIMAQMGAYVPCKEAVLPIFDQIFTRIGAA  616

Query  716  DSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIG  775
            D  + G STFM EMLE    L  AT+DSLII DE+GRGTSTYDG  LA A+ EY+A    
Sbjct  617  DDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDEIGRGTSTYDGLALAQAMIEYVAETSH  676

Query  776  AFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELAN  835
            A  +F+TH+HELT L   +P++ N+HV A   +  L  L++VK G  D S+GI VA+LA+
Sbjct  677  AKTLFSTHYHELTTLDQALPSLKNVHVAANEYKGELIFLHKVKDGAVDDSYGIQVAKLAD  736

Query  836  FPKHVIECAKQKALELEEFQ-YIGESQGYDIMEPAAKKCYLEREQGEKIIQEFLSKVKQM  894
             P+ VI  A+   + L EF+   G+      ++    +  + +E     ++E    + Q 
Sbjct  737  LPEKVISRAQ---VILSEFEASAGKKSSISNLKMVENEPEINQENLNLSVEETTDTLSQK  793

Query  895  PFTEMS--------EENITIKLKQL  911
             F + S        E  I +++K L
Sbjct  794  DFEQASFDLFENDQESEIELQIKNL  818


>gi|28378884|ref|NP_785776.1|  DNA mismatch repair protein [Lactobacillus plantarum WCFS1]
Length=896

 Score =  265 bits (676),  Expect = 7e-69
 Identities = 209/701 (29%), Positives = 343/701 (48%), Gaps = 47/701 (6%)

Query  155  VDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKECVLPGGETAGDMGKLR  214
            +   +Q G  Y D    +L       ND   N    L  +  KE V+     A D   LR
Sbjct  134  IQRDQQYGFAYADLSTGELKTSVLTTNDTLINE---LTSLQTKEIVVDDS-VASD---LR  186

Query  215  QIIQRGGILITERKKADFSTKDIYQDLNRLLKGKKGEQMNSAVLPEMENQVAVSSLSAVI  274
              I+  GILI+E+              N +    +   +   +  ++E QV    +  ++
Sbjct  187  DQIKTLGILISEQ--------------NNVTPQAQLSYLTQDLTVDLEQQV----VERLL  228

Query  275  KFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCK  334
             ++ +    S     +   ++ S ++KLD  +   L L + S+       +L  LL++ K
Sbjct  229  MYITVTQKRSLAHLQKAIAYEPSYFLKLDHNSKYNLELMK-SIRTGKKQGTLLWLLDETK  287

Query  335  TPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKF  394
            T  G RL+ QWI +PL+ K  IE R N V   ++    R  LQE+L + + DL RLA + 
Sbjct  288  TAMGGRLLKQWIDRPLIVKADIETRQNKVATLLDHYFERSNLQEELTKVY-DLERLAGRV  346

Query  395  QRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMI  454
               + N +D  +L   + Q+P +   L + + +       VF   +  L        ++I
Sbjct  347  AFGSVNGRDLVQLKTSLRQIPKIRYILSELDTQ-------VFNDEVNQL-DPVEDVADLI  398

Query  455  ETTL--DMDQVENHEFLVKPSFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIK  512
            +  +  D         ++K  ++  L + R+ MN+ +K +           G+   K +K
Sbjct  399  DAAIVEDAPLSVTDGGVIKDGYNEQLDQYRDAMNNGKKWIAELEAQERATTGI---KNLK  455

Query  513  LDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyee  572
            +  +  FGYY  VT      L  ++ +       N  +F+  +L S      + ++   +
Sbjct  456  IGFNRVFGYYIEVTKANLAQLPKDR-YERKQTLTNAERFSTPELKSHESLILEAESHSTD  514

Query  573  AQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRI  632
             +  +  ++       ++ +QTL   +A +D + SFA VS      +VRP + +    +I
Sbjct  515  LEYQLFTKVRETVKKAIQRLQTLAKAVAAIDVLQSFAVVSED--YHFVRPKLTKSHDLKI  572

Query  633  ILKASRHACVE-VQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQI  691
            +    RH  VE V    +++PN+V    D+ +  +ITGPNM GKSTY+RQ  + V+MAQI
Sbjct  573  V--DGRHPVVEKVMGNQSYVPNNVTMSPDETVL-LITGPNMSGKSTYMRQLALTVIMAQI  629

Query  692  GCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELG  751
            GCFVP +SA++ I D I  R+GA D  + G STFM EM E  + L+ AT +SL++ DE+G
Sbjct  630  GCFVPAKSAQLPIFDQIFTRIGATDDLISGQSTFMVEMQEANNALQHATANSLVLFDEIG  689

Query  752  RGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetl  811
            RGT+TYDG  LA AI E++   I A  +F+TH+HELTAL  ++  + N+HV A   +  L
Sbjct  690  RGTATYDGMALAQAIIEFVHNHIHAKTLFSTHYHELTALDQELSGLRNVHVGATEQDGEL  749

Query  812  tMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELE  852
              L++V+ G  D+S+G+HVA+LA  P  ++E A +    LE
Sbjct  750  VFLHKVEPGAADKSYGVHVAKLAGMPTSLLERANKILTSLE  790


>gi|23002388|ref|ZP_00046065.1|  COG0249: Mismatch repair ATPase (MutS family) [Lactobacillus 
gasseri]
Length=857

 Score =  265 bits (676),  Expect = 7e-69
 Identities = 199/594 (33%), Positives = 307/594 (51%), Gaps = 50/594 (8%)

Query  293  TFDFSQYMKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMD  352
            +++ +QY+++       L L + S + +    SL  LL+K  T  G RL+  WI++PL+ 
Sbjct  247  SYEPTQYLQMSHTVQTNLELIK-SAKTSKKMGSLFWLLDKTSTAMGGRLLKSWIERPLLS  305

Query  353  KNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGIN  412
               I  R  +V+A ++D   R+ +  D L+   DL RL  +    + N ++  +L   + 
Sbjct  306  VTEITRRQEMVQALLDDYFTREKVI-DSLKGVYDLERLTGRIAFGSVNAREMLQLAHSLG  364

Query  413  QLPNVIQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEF-LVK  471
             +P+++ +L +    H +   A  + PL  +         ++ T +D   +   E  L++
Sbjct  365  AIPDILNSLLETNNPHLQNF-AKQIDPLKGIHD------LIVNTIVDNPPLLTTEGGLIR  417

Query  472  PSFDPNLSELREIMNDLEKKMQSTLISAARDL-GLDPGKQIKLDSSAQFGYYFRVT-CKE  529
                  L   R+ MN+  KK  S + S  R++ G++    +K+  +  FGYY  VT   +
Sbjct  418  EGVSDQLDRYRDAMNN-GKKWLSEMESHEREVTGIN---NLKVGYNKVFGYYIEVTNSNK  473

Query  530  EKV----------LRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVK  579
            +KV          L N + + T D++++      ++  S   EY           D  VK
Sbjct  474  DKVPTDRYTRKQTLTNAERYITPDLKEHESLILEAEAKSTGLEY-----------DLFVK  522

Query  580  EIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRH  639
               N+   Y+  +Q L   +A LD + +FA VS      YVRP      Q  I +   RH
Sbjct  523  LRENVKK-YIPALQKLAKQVASLDVLTNFATVSEQNN--YVRPDFTVDKQ-EINVVNGRH  578

Query  640  ACVE-VQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCE  698
              VE V    ++IPNDV  ++D  +F +ITGPNM GKSTY+RQ  +I +MAQIGCFVP +
Sbjct  579  PVVEQVMTAGSYIPNDVKMDQDTDIF-LITGPNMSGKSTYMRQMALIAIMAQIGCFVPAD  637

Query  699  SAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYD  758
            SA + I D I  R+GA D  + G STFM EM E    L+ ATK SL++ DE+GRGT+TYD
Sbjct  638  SATLPIFDQIFTRIGAADDLISGQSTFMVEMSEANDALQHATKRSLVLFDEIGRGTATYD  697

Query  759  GFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVK  818
            G  LA AI +Y+  K+GA  +FATH+HELT L   +  + N+HV A      L  L+++ 
Sbjct  698  GMALAGAIVKYLHDKVGAKTLFATHYHELTDLDQTLKHLKNIHVGATEENGKLIFLHKIL  757

Query  819  KGVCDQSFGIHVAELANFPKHVIECAKQKALELEEFQYIGESQGYDIMEPAAKK  872
             G  DQS+GIHVA+LA  P  V+  A      LE+       QG   ++PA+++
Sbjct  758  PGPADQSYGIHVAQLAGLPHKVLREATTMLKRLEK-------QGAGELQPASEQ  804


>gi|88858313|ref|ZP_01132955.1|  DNA mismatch repair protein [Pseudoalteromonas tunicata D2]
Length=859

 Score =  265 bits (676),  Expect = 7e-69
 Identities = 187/584 (32%), Positives = 297/584 (50%), Gaps = 52/584 (8%)

Query  302  LDIAAVRALNL---FQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEE  358
            LD A  + L L     G +++T     LA +L+K  TP G RL+ + +  P  D N +  
Sbjct  274  LDAATRKNLELTINLSGDIDNT-----LAQVLDKTATPMGSRLLKRRLHTPTRDHNELNA  328

Query  359  RLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVI  418
            RL+ V   +           D+L++  D+ R+  +   ++A  +D  RL   + QL +++
Sbjct  329  RLDAVSEIMNCGLFNDFY--DVLKQIGDIERIVARLALRSARPRDLSRLRNALQQL-HLV  385

Query  419  QALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVK------P  472
            Q L  H   ++          L+D++   +     I++ L+   +EN   L++      P
Sbjct  386  QNLLAHTSSNR----------LSDIKRASAVIPH-IQSLLEQAIIENPPVLIRDGGVIAP  434

Query  473  SFDPNLSELR-------EIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRV  525
             +   L E R       +I+  LE K +     A   +G +      ++ S  +      
Sbjct  435  GYHAELDEWRALSQGATDIVEALEAKERERTGIATLKIGYNRVHGFYIEVSRAYADQVPP  494

Query  526  TCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNIS  585
                 + L+NN+ +   +++++  K   S+  +L              +  + + + +  
Sbjct  495  EYIRRQTLKNNERYIIPELKEHEDKVLGSQSKALAL------------EKQLYEGLFDQL  542

Query  586  SGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQ  645
              +++  Q L   L++LD + +FA       + Y RP +++     I +   RH  VE  
Sbjct  543  LPHLKQFQQLAASLSELDVINNFAE--RAETLNYCRPTLIDNQD--ITIVEGRHPVVEHV  598

Query  646  DEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIV  705
                FI N  +    ++M  IITGPNMGGKSTY+RQT +IVL+A +GCFVP   A + IV
Sbjct  599  MSEPFIANPTHLAPTRKML-IITGPNMGGKSTYMRQTALIVLLAHVGCFVPASQANIGIV  657

Query  706  DCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWA  765
            D I  R+GA D    G STFM EM ETA+IL +AT+ SL+++DE+GRGTSTYDG  LAWA
Sbjct  658  DRIFTRIGASDDLASGRSTFMVEMTETANILNNATQHSLVLMDEIGRGTSTYDGLSLAWA  717

Query  766  ISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQS  825
             +EY+A KI A  +FATH+ ELT LA Q+P + N+H+ A+   +T+   + V  G   +S
Sbjct  718  TAEYLAHKISAKTLFATHYFELTELAEQVPGLVNVHLDAIEHNDTIAFKHTVLDGPASKS  777

Query  826  FGIHVAELANFPKHVIECAKQKALELEEFQYIGESQGYDIMEPA  869
            FG+ VA LA  PK VI+ AKQK   LE+ Q +  S  +D++  A
Sbjct  778  FGLQVAALAGVPKSVIKQAKQKLRLLEQHQLVNNSGQFDLLTQA  821


>gi|16272647|ref|NP_438865.1|  DNA mismatch repair protein [Haemophilus influenzae Rd KW20]
Length=861

 Score =  264 bits (674),  Expect = 1e-68
 Identities = 195/633 (30%), Positives = 327/633 (51%), Gaps = 56/633 (8%)

Query  300  MKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEER  359
            ++LD A  R L L Q     T    +LA++L+KC TP G RL+ +WI QP+ D  ++++R
Sbjct  267  IQLDAATRRNLELTQNLAGGT--ENTLASVLDKCVTPMGSRLLKRWIHQPVRDVEKLKQR  324

Query  360  LNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQ  419
               + A + + +L   LQ   L+   D+ R+  +   ++A  +D  RL   + Q+P  ++
Sbjct  325  QQSI-AEILNFDLVDELQP-YLQLVGDMERILARVALRSARPRDLTRLRTALEQIP-ALR  381

Query  420  ALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPS------  473
            A+ + +          F+T L    +DFS+  ++++  L    +E    L++        
Sbjct  382  AIVQQK-------TPPFLTALFSQIADFSEQCDLLQRAL----IETPPLLIRDGGVIAEG  430

Query  474  FDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKE----  529
            ++  L E R + +   + +++         G+D    +K+  +A  GYY +++  +    
Sbjct  431  YNAELDEWRMLSDGATQYLENLEKRERESTGIDT---LKIGFNAVHGYYIQISQGQAHKA  487

Query  530  ------EKVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVN  583
                   + L+N + +   ++++   K   SK  +L              +  +  E+ +
Sbjct  488  PIHYVRRQTLKNAERYIIPELKEYEDKVLKSKGAALAL------------EKQLYDELFD  535

Query  584  ISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVE  643
            +   ++  +Q  +  L++LD +V+ A  ++   + YV P   ++   +I  K  RH  VE
Sbjct  536  LLLPHLGSLQLASLALSELDVLVNLAERAD--TLNYVMPTFCDEVSVKI--KNGRHPVVE  591

Query  644  VQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVS  703
               +  FI N V    ++ +  +ITGPNMGGKSTY+RQT +I L+A IG FVP +SA + 
Sbjct  592  QVLKDPFIANPVELNHNRHLL-VITGPNMGGKSTYMRQTALITLLAYIGSFVPADSARIG  650

Query  704  IVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLA  763
             +D I  R+GA D    G STFM EM E A+IL  AT  SL++IDE+GRGTSTYDG  LA
Sbjct  651  PIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATAQSLVLIDEIGRGTSTYDGLSLA  710

Query  764  WAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCD  823
            WA +E+++ KI +  +FATH+ ELTAL  Q+  + N+H+ AL    T+  ++ V+ G   
Sbjct  711  WACAEWLSKKIRSLTLFATHYFELTALPEQLEGIANIHLDALEHNNTIAFMHAVQNGAAS  770

Query  824  QSFGIHVAELANFPKHVIECAKQKALELEE-FQYIGESQGYDIMEPAAKKCYLEREQGEK  882
            +S+G+ VA LA  P+ VI+ AKQK  +LE+   Y  E Q   + E    +  L  EQ   
Sbjct  771  KSYGLAVAALAGVPQSVIKLAKQKLTQLEKNSSYSAEQQIQALREANHNQGELFFEQETD  830

Query  883  IIQEFLSKVKQMPFTEMSEENITIKLKQLKAEV  915
             ++E + K+      ++S +     L QLK  V
Sbjct  831  ALREAIEKLDP---DDLSPKQALAYLYQLKKMV  860


>gi|78485935|ref|YP_391860.1|  DNA mismatch repair protein MutS [Thiomicrospira crunogena XCL-2]
Length=871

 Score =  264 bits (674),  Expect = 1e-68
 Identities = 190/600 (31%), Positives = 309/600 (51%), Gaps = 48/600 (8%)

Query  267  VSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLFQGSVEDTTGSQS-  325
            +S+   ++ + + +  ++    F L T+     + LD  + R L L      + TG ++ 
Sbjct  235  ISAAGVILHYAQSMLQNTLAHVFSLQTYQADDALALDAMSRRNLELDT----NLTGGKNH  290

Query  326  -LAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDL---L  381
             L A+L+   T  G RL+N+W+ QPL +++ I +R N +E  +E     Q  QE+    L
Sbjct  291  TLFAILDNATTAMGSRLMNRWLNQPLRNRDIINDRFNAIEDIIE-----QHSQEEFRSAL  345

Query  382  RRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHE--GKHQKLLLAVFVTP  439
            +   DL R+  +    +A  +D   L + +NQLP  +QAL K +   K Q+L   + + P
Sbjct  346  KPIGDLERILSRVSLYSARPRDILHLGRSLNQLPE-LQALLKQQTANKWQQLSKQLGLYP  404

Query  440  LTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPS------FDPNLSELREIMNDLEKKMQ  493
                     +    +ET L    VE+   L++        +D  L ELR + N     + 
Sbjct  405  ---------ELASQLETAL----VESPPMLMRDGGVFAEGYDSELDELRNLKNQAGDYL-  450

Query  494  STLISAARDLGLDPGKQIKLDSSAQFGYYFRVT-CKEEKVLRNNKNFSTVDIQKNGVKFT  552
              L   AR+        +K+  +   GYY  V+  + + V  +     T+  Q+   ++ 
Sbjct  451  --LALEAREKERTGITTLKVGYNRVHGYYIEVSKLQSDNVPADYVRRQTLKAQE---RYI  505

Query  553  NSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVS  612
              +L    ++      +    +  + ++++   +  ++ +Q     LA+ D +VS A   
Sbjct  506  TPELKEFEDKVLSANEKALAREKWLYQQLLERLNQDLQALQRTAAALAETDVLVSLAR--  563

Query  613  NGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYFEKDKQMFHIITGPNM  672
                +   RP +    +  I +K  RH  VE      FIPND  F++ +++  IITGPNM
Sbjct  564  QAINLNLTRPTL--SSEPGIDIKQGRHLTVEALSNQPFIPNDTCFDEQRRL-QIITGPNM  620

Query  673  GGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLET  732
            GGKST++RQT +I +MA +G FVP ESA +  +D I  R+GA D    G STFM EM ET
Sbjct  621  GGKSTFMRQTALIAIMAYMGSFVPAESATLGPIDRIFTRIGASDDLTSGRSTFMVEMTET  680

Query  733  ASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALAN  792
            A+IL  A+ +SLI++DE+GRGTST+DG  LAWAI+E +A  I  +C+FATH+ ELT L  
Sbjct  681  ANILHHASPESLILMDEVGRGTSTFDGLALAWAIAEQMAQSIQGYCLFATHYFELTTLVE  740

Query  793  QIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELE  852
            Q     N+H++A+  ++ +  ++QV++G   QS+G+ VA LA  P  VI+ AK+    LE
Sbjct  741  QFNNTVNIHLSAIEHQDKIVFMHQVEEGPASQSYGLQVAALAGVPTAVIDKAKKHLHRLE  800


>gi|89894338|ref|YP_517825.1|  hypothetical protein DSY1592 [Desulfitobacterium hafniense Y51]
Length=862

 Score =  264 bits (674),  Expect = 1e-68
 Identities = 211/622 (33%), Positives = 310/622 (49%), Gaps = 55/622 (8%)

Query  299  YMKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEE  358
            +M LD    R L L + S+       +L ++L+  KT  G RL+ +WI+QPL+ K  IE+
Sbjct  260  WMLLDPWTRRNLELTE-SIRGQGKKGTLLSVLDFTKTAFGGRLLRRWIEQPLLLKGEIEK  318

Query  359  RLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVI  418
            RL+ VEA VED+ LR  L + L  +  DL RL  K     AN +D   L Q +  LP + 
Sbjct  319  RLDYVEALVEDSFLRGDLIQ-LFGKVYDLERLMGKVSYGTANARDLLSLAQTLGVLPQLR  377

Query  419  QALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNL  478
              L   EGK + L    F+  L  L    +  ++ I     +   + +  L+K  +   +
Sbjct  378  ALLA--EGKSEPL--QAFIPALEGLDPLAATLEQAINPEAPISLKDGN--LLKAGYSVEI  431

Query  479  SELREIMNDLEKKMQSTLISAARD-LGLDPGKQIKLDSSAQFGYYFRVTCKE--------  529
             ELR I +   K   + L S  +D  G+   + +K+  +  FGYY  VT           
Sbjct  432  DELRSISSG-GKAWVAKLESMEKDRTGI---RSLKVGYNKVFGYYIEVTHANSHLIPAEY  487

Query  530  --EKVLRNNKNFSTVDIQKNGVKFTNS--KLTSLneeytknkteyeeAQDAIVKEIVNIS  585
              ++ L N + F T ++++   K   +  K+T L  +      E    Q A + E  +  
Sbjct  488  IRKQTLANAERFITPELKEYEQKILGAEEKVTQLEYQLFLELRETVRGQAAKILEAAH--  545

Query  586  SGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVE-V  644
                         LA++D   S A  +      Y RP +  KG+G + +   RH  VE +
Sbjct  546  ------------ALAEIDVYTSLAEAA--VRHHYSRPVM--KGEGGLTIIEGRHPVVESM  589

Query  645  QDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSI  704
              + +F+PND    +DK +  +ITGPNM GKSTY+RQ  +IVLMAQIG FVP + A + I
Sbjct  590  LQDTSFVPNDTILTEDKHLA-LITGPNMAGKSTYMRQVALIVLMAQIGSFVPAQQATIPI  648

Query  705  VDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAW  764
             D I  RVGA D    G STFM EM E A ILR  T  SLII+DE+GRGT+TYDG  +AW
Sbjct  649  ADHIFTRVGASDDLASGQSTFMVEMYEVAHILRHVTPQSLIILDEVGRGTATYDGLSIAW  708

Query  765  AISEYIATKIG-AFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCD  823
            A++EY+A +      +FATH+HELT L      + NLHV      E +  L+++  G  D
Sbjct  709  AVAEYLAGQENKPKTLFATHYHELTDLEETHSGIFNLHVGVREHGEEIVFLHKIIPGRAD  768

Query  824  QSFGIHVAELANFPKHVIECAKQKALELEEFQYIGESQGYDIMEPAAKKCYLEREQGEKI  883
            +S+GI VA+LA  P +++  AK    ELE        +     E A +    E +  + +
Sbjct  769  RSYGIQVAKLAGLPANLLHRAKIILHELESSAKESRQEHLFNKEKATQLSLFEVQPLDPL  828

Query  884  IQEFLSKVKQMPFTEMSEENIT  905
            +QE          +E+S E++T
Sbjct  829  LQE---------VSELSVEDLT  841


>gi|86146340|ref|ZP_01064664.1|  DNA mismatch repair protein [Vibrio sp. MED222]
Length=853

 Score =  264 bits (674),  Expect = 1e-68
 Identities = 180/565 (31%), Positives = 302/565 (53%), Gaps = 48/565 (8%)

Query  302  LDIAAVRALNLFQ--GSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEER  359
            LD A  R L + Q  G   D T    LA +L+   T  G R++ +W+ QP+ + + +++R
Sbjct  266  LDAATRRNLEITQNLGGGSDNT----LAEVLDHTATAMGSRMLKRWLHQPMRNISALDQR  321

Query  360  LNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQ  419
            L+ +   ++D  L   LQ  L ++  D+ R+  +   ++A  +D  RL Q +  LP + +
Sbjct  322  LDAIGE-MKDLALFTELQPTL-KQIGDIERILARLALRSARPRDMARLRQAMEYLPELAE  379

Query  420  ALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQ--VENHEFLVKPSFDPN  477
             L +   KH       ++T L    S   +  E++E  +  +   V     ++   ++  
Sbjct  380  TLTQL--KHP------YLTQLAQYASPVDEVSELLERAIKENPPVVIRDGGVIAEGYNAE  431

Query  478  LSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEE-------  530
            L E R++     + +           G+D    +K+  +   G++ +V+  +        
Sbjct  432  LDEWRDLAAGATEFLDKLEQEERERHGIDT---LKVGYNNVHGFFIQVSRGQSHLVPPHY  488

Query  531  ---KVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSG  587
               + L+N + +   +++++  K  +SK  +L              +  +  E+ ++   
Sbjct  489  VRRQTLKNAERYIIPELKEHEDKVLSSKSKALAI------------EKKLWDELFDLLLP  536

Query  588  YVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDE  647
            Y+E +Q +   ++QLD + + A  ++   + Y RP + E    +I  +A RH  VE   +
Sbjct  537  YLERLQNIASSVSQLDVLQNLAERAD--TLDYCRPTMTESAGVQI--QAGRHPVVEQVMD  592

Query  648  IAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDC  707
              FI N +     ++M  IITGPNMGGKSTY+RQT +I LMA IGC+VP ESA +  +D 
Sbjct  593  EPFIANPIDLNDQRKML-IITGPNMGGKSTYMRQTALIALMAHIGCYVPAESATIGSIDR  651

Query  708  ILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAIS  767
            I  R+GA D    G STFM EM ETA+IL +AT +SL+++DE+GRGTSTYDG  LAWA +
Sbjct  652  IFTRIGASDDLASGRSTFMVEMTETANILHNATPNSLVLMDEIGRGTSTYDGLSLAWASA  711

Query  768  EYIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFG  827
            E++A +I A  +FATH+ ELT L NQIPT+ N+H+ A+   +++  ++ V++G   +S+G
Sbjct  712  EWLANQINAMTLFATHYFELTELPNQIPTLANVHLDAVEHGDSIAFMHAVQEGAASKSYG  771

Query  828  IHVAELANFPKHVIECAKQKALELE  852
            + VA LA  PK VI+ A+ K  +LE
Sbjct  772  LAVAGLAGVPKAVIKNARAKLTQLE  796


>gi|88195005|ref|YP_499805.1|  DNA mismatch repair protein MutS [Staphylococcus aureus subsp. 
aureus NCTC 8325]
Length=840

 Score =  263 bits (673),  Expect = 2e-68
 Identities = 192/606 (31%), Positives = 305/606 (50%), Gaps = 25/606 (4%)

Query  299  YMKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEE  358
            YMK+D  A R L L + S+   +   +L  L+++ KTP G R + QWI +PL+ K +IE 
Sbjct  215  YMKMDFYAKRNLELTE-SIRLKSKKGTLLWLMDETKTPMGARRLKQWIDRPLISKEQIEA  273

Query  359  RLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVI  418
            RL++V+ F      R TL+   L +  D+ RL  +      N +D  +L   I+++PN+ 
Sbjct  274  RLDIVDEFSAHFIERDTLRT-YLNQVYDIERLVGRVSYGNVNARDLIQLKHSISEIPNIK  332

Query  419  QALEKHEGKHQKLLLAVF-VTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPN  477
              L      +Q  L+ V  + PL DL       Q ++E   +         L K  F+  
Sbjct  333  ALLNS---MNQNTLVQVNQLEPLDDLLDILE--QSLVE---EPPISVKDGGLFKVGFNTQ  384

Query  478  LSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNK  537
            L E  E   + +  +        +  G+   K +K+  +  FGY+  +T    +    ++
Sbjct  385  LDEYLEASKNGKTWLAELQAKERQRTGI---KSLKISFNKVFGYFIEITRANLQNFEPSE  441

Query  538  -NFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLN  596
              +       N  +F   +L    +     + +  E +  +  ++      Y E +Q   
Sbjct  442  FGYMRKQTLSNAERFITDELKEKEDIILGAEDKAIELEYQLFVQLREEVKKYTERLQQQA  501

Query  597  DVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVE-VQDEIAFIPNDV  655
             ++++LD + SFA ++      Y RP+  E     ++   SRH  VE V D   ++PN+ 
Sbjct  502  KIISELDCLQSFAEIAQ--KYNYTRPSFSENKTLELV--ESRHPVVERVMDYNDYVPNNC  557

Query  656  YFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAG  715
              + +    ++ITGPNM GKSTY+RQ  +I +MAQ+G +VPC+ A + I D I  R+GA 
Sbjct  558  RLDNET-FIYLITGPNMSGKSTYMRQVAIISIMAQMGAYVPCKEAVLPIFDQIFTRIGAA  616

Query  716  DSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIG  775
            D  + G STFM EMLE    L  AT+DSLII DE+GRGTSTYDG  LA A+ EY+A    
Sbjct  617  DDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDEIGRGTSTYDGLALAQAMIEYVAETSH  676

Query  776  AFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELAN  835
            A  +F+TH+HELT L   +P++ N+HV A   +  L  L++VK G  D S+GI VA+LA+
Sbjct  677  AKTLFSTHYHELTTLDQALPSLKNVHVAANEYKGELIFLHKVKDGAVDDSYGIQVAKLAD  736

Query  836  FPKHVIECAKQKALELEEFQ-YIGESQGYDIMEPAAKKCYLEREQGEKIIQEFLSKVKQM  894
             P+ VI  A+   + L EF+   G+      ++    +  + +E     ++E    + Q 
Sbjct  737  LPEKVISRAQ---VILSEFEASAGKKSSISNLKMVENEPEINQENLNLSVEETTDTLSQK  793

Query  895  PFTEMS  900
             F + S
Sbjct  794  DFEQAS  799


>gi|82750895|ref|YP_416636.1|  DNA mismatch repair protein [Staphylococcus aureus RF122]
Length=872

 Score =  263 bits (673),  Expect = 2e-68
 Identities = 195/625 (31%), Positives = 312/625 (49%), Gaps = 33/625 (5%)

Query  299  YMKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEE  358
            YMK+D  A R L L + S+   +   +L  L+++ KTP G R + QWI +PL+ K +IE 
Sbjct  247  YMKMDFYAKRNLELTE-SIRLKSKKGTLLWLMDETKTPMGARRLKQWIDRPLISKEQIEA  305

Query  359  RLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVI  418
            RL++V+ F      R TL+   L +  D+ RL  +      N +D  +L   I+++PN+ 
Sbjct  306  RLDIVDEFSAHFIERDTLRT-YLNQVYDIERLVGRVSYGNVNARDLIQLKHSISEIPNIK  364

Query  419  QALEKHEGKHQKLLLAVF-VTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPN  477
              L      +Q  L+ V  + PL DL       Q ++E   +         L K  F+  
Sbjct  365  ALLNS---MNQDTLVQVNQLEPLDDLLDILE--QSLVE---EPPISVKDGGLFKVGFNMQ  416

Query  478  LSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNK  537
            L E  E   + +  +        +  G+   K +K+  +  FGY+  +T    +    ++
Sbjct  417  LDEYLEASKNGKTWLAELQAKERQRTGI---KSLKISFNKVFGYFIEITRANLQNFEPSE  473

Query  538  -NFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLN  596
              +       N  +F   +L    +     + +  E +  +  ++      Y E +Q   
Sbjct  474  FGYMRKQTLSNAERFITDELKEKEDIILGAEDKAIELEYQLFVQLREEVKKYTERLQQQA  533

Query  597  DVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVE-VQDEIAFIPNDV  655
             ++++LD + SFA ++      Y RP+  E     ++   SRH  VE V D   ++PN+ 
Sbjct  534  KIISELDCLQSFAEIAQ--KYNYTRPSFSENKTLELV--ESRHPVVERVMDYNDYVPNNC  589

Query  656  YFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAG  715
              + +    ++ITGPNM GKSTY+RQ  +I +MAQ+G +VPC+ A + I D I  R+GA 
Sbjct  590  RLDNET-FIYLITGPNMSGKSTYMRQVAIISIMAQMGAYVPCKEAVLPIFDQIFTRIGAA  648

Query  716  DSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIG  775
            D  + G STFM EMLE    L  AT+DSLII DE+GRGTSTYDG  LA A+ EY+A    
Sbjct  649  DDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDEIGRGTSTYDGLALAQAMIEYVAETSH  708

Query  776  AFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELAN  835
            A  +F+TH+HELT L   +P++ N+HV A   +  L  L++VK G  D S+GI VA+LA+
Sbjct  709  AKTLFSTHYHELTTLDQALPSLKNVHVAANEYKGELIFLHKVKDGAVDDSYGIQVAKLAD  768

Query  836  FPKHVIECAKQKALELEEFQYIGESQ-GYDIMEPAAKKCYLEREQGEKIIQEFLSKVKQM  894
             P+ VI  A+   + L EF+   + +     ++    +  + +E     ++E    + Q 
Sbjct  769  LPEKVISRAQ---VILSEFEASADKKSSISNLKMVENEPEINQENSNLSVEETTDTLSQK  825

Query  895  PFTEMS--------EENITIKLKQL  911
             F + S        E  I +++K L
Sbjct  826  DFEQASFDLFENDQESEIELQIKNL  850


>gi|42630971|ref|ZP_00156509.1|  COG0249: Mismatch repair ATPase (MutS family) [Haemophilus influenzae 
R2866]
Length=861

 Score =  263 bits (673),  Expect = 2e-68
 Identities = 194/633 (30%), Positives = 327/633 (51%), Gaps = 56/633 (8%)

Query  300  MKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEER  359
            ++LD A  R L L Q     T    +LA++L+KC TP G RL+ +WI QP+ D  ++++R
Sbjct  267  IQLDAATRRNLELTQNLAGGT--ENTLASVLDKCVTPMGSRLLKRWIHQPIRDVEKLKQR  324

Query  360  LNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQ  419
               + A + + +L   LQ   L+   D+ R+  +   ++A  +D  RL   + Q+P  ++
Sbjct  325  QQSI-AEILNFDLVDELQT-YLQLVGDMERILARVALRSARPRDLTRLRTALEQIP-ALR  381

Query  420  ALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPS------  473
            A+ + +          F+T L    +DFS+  ++++  L    +E    L++        
Sbjct  382  AIVQQK-------TPPFLTALFSQIADFSEQCDLLQRAL----IETPPLLIRDGGVIAEG  430

Query  474  FDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKE----  529
            ++  L E R + +   + +++         G+D    +K+  +A  GYY +++  +    
Sbjct  431  YNAELDEWRMLSDGATQYLENLEKRERESTGIDT---LKIGFNAVHGYYIQISQGQAHKA  487

Query  530  ------EKVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVN  583
                   + L+N + +   ++++   K   SK  +L              +  +  E+ +
Sbjct  488  PIHYVRRQTLKNAERYIIPELKEYEDKVLKSKGAALAL------------EKQLYDELFD  535

Query  584  ISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVE  643
            +   ++  +Q  +  L++LD +V+ A  ++   + YV P   ++   +I  +  RH  VE
Sbjct  536  LLLPHLGTLQLASLALSELDVLVNLAERAD--TLNYVMPTFCDEVSVKI--ENGRHPVVE  591

Query  644  VQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVS  703
               +  FI N V    ++ +  +ITGPNMGGKSTY+RQT +I L+A IG FVP +SA + 
Sbjct  592  QVLKDPFIANPVELNHNRHLL-VITGPNMGGKSTYMRQTALITLLAYIGSFVPADSARIG  650

Query  704  IVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLA  763
             +D I  R+GA D    G STFM EM E A+IL  AT  SL++IDE+GRGTSTYDG  LA
Sbjct  651  PIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATAQSLVLIDEIGRGTSTYDGLSLA  710

Query  764  WAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCD  823
            WA +E++A KI +  +FATH+ ELTAL  Q+  + N+H+ AL    ++  ++ V+ G   
Sbjct  711  WACAEWLAKKIRSLTLFATHYFELTALPEQLEGIANIHLDALEHNNSIAFMHAVQDGAAS  770

Query  824  QSFGIHVAELANFPKHVIECAKQKALELEE-FQYIGESQGYDIMEPAAKKCYLEREQGEK  882
            +S+G+ VA LA  P+ VI+ AKQK  +LE+   Y  E Q   + E    +  L  EQ   
Sbjct  771  KSYGLAVAALAGVPQSVIKLAKQKLTQLEKNSSYSAEQQIQALREANHNQGELLFEQETD  830

Query  883  IIQEFLSKVKQMPFTEMSEENITIKLKQLKAEV  915
             ++E + K+      ++S +     L QLK  V
Sbjct  831  ALREAIEKLDP---DDLSPKQALAYLYQLKKMV  860


>gi|48871118|ref|ZP_00323834.1|  COG0249: Mismatch repair ATPase (MutS family) [Pediococcus pentosaceus 
ATCC 25745]
Length=873

 Score =  263 bits (673),  Expect = 2e-68
 Identities = 208/699 (29%), Positives = 350/699 (50%), Gaps = 35/699 (5%)

Query  223  LITERKKADFSTKDIYQDLNRLLKGKKGEQMNSAVLPEMENQVAVSSLSAVIKFLELL--  280
            ++T+   A+ S ++ +++LN +L  K+ E   SA L  +   +  S+   V+K L     
Sbjct  177  IVTDESLAE-SFEERFKELN-ILVSKQSEVEISAELSYLIQDLTSSTEIEVVKQLLTYVQ  234

Query  281  -SDDSNFGQFE-LTTFDFSQYMKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQG  338
             +   N    +    ++ S ++++D A+   L L +  +       +L  LL++ KT  G
Sbjct  235  TTQKRNLAHIQKAVAYEPSFFLRMDHASKYNLELTR-LIRTGKKQGTLLWLLDETKTAMG  293

Query  339  QRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQA  398
             RL+ QW+ +PL+ K  I  R + V+  V+    R  LQE+L + + DL RLA +    +
Sbjct  294  GRLLKQWLDRPLIRKKEIISRQDRVQVLVDHFFERSNLQEELTKVY-DLERLAGRVAFGS  352

Query  399  ANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTL  458
             N +D  +L   + Q+P V   LE+       L   VF   L  L    S   E+I+  +
Sbjct  353  VNGRDLIQLKTSLLQIPKVRHILEE-------LSEPVFDDALEHL-DPVSDIAELIQNAI  404

Query  459  DMD---QVENHEFLVKPSFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDS  515
            D D    V + + ++K  +   L E R+ M + +K +           G+   K +K+  
Sbjct  405  DEDAPISVTDGD-IIKDGYHAKLDEYRDAMRNGKKWIADLQAQERATTGI---KTLKIGY  460

Query  516  SAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQD  575
            +  FGYY  VT      +   + +       N  +F   +L        + + +  + + 
Sbjct  461  NKVFGYYIEVTRANLANIPEGR-YERKQTLTNAERFITPELKEKERIILEAEQKSTDLEY  519

Query  576  AIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILK  635
             + KEI  +    +E +Q L   +A+LD + SFA VS      +V+P + +     I +K
Sbjct  520  QLFKEIRELIKKQIERLQDLAKQVAELDVLQSFAVVSE--KYQFVKPTMTKNHA--IEIK  575

Query  636  ASRHACVE-VQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCF  694
              RH  VE V    +++PN++  + +  +  +ITGPNM GKSTY+RQ  + V+MAQ+GCF
Sbjct  576  DGRHPVVEKVMGHQSYVPNNIDMDDNTDIL-LITGPNMSGKSTYMRQLALTVIMAQMGCF  634

Query  695  VPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGT  754
            V    A + I D I  R+GA D  + G STFM EM E    L+  T +SL++ DE+GRGT
Sbjct  635  VAASEATLPIFDQIFTRIGAADDLISGQSTFMVEMQEANRALKDGTSNSLVLFDEIGRGT  694

Query  755  STYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltML  814
            +TYDG  LA +I E+I   + A  +F+TH+HELT L   +  + N+HV A+     L  L
Sbjct  695  ATYDGMALAQSIIEFIHQNVHAKTLFSTHYHELTELDQSLEHLKNVHVGAVEQNGNLVFL  754

Query  815  YQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEEFQYIGESQGYDIMEPAAKKCY  874
            ++++ G  D+S+GIHVA+LA  P  ++   K+ ++ LE+ +   ++    +  P +K   
Sbjct  755  HKMEDGPADKSYGIHVAKLAGMPDKLL---KRASVILEKLEAKDQAHSDGVETPVSKATP  811

Query  875  LEREQGEKIIQE--FLSKVKQMPFTEMSEENITIKLKQL  911
            +E EQ   +I+E   L +    P     +E +  +L+QL
Sbjct  812  VESEQTPTMIEEQMALFETPTKPVKSSPKEEVANQLEQL  850


>gi|84390123|ref|ZP_00991385.1|  DNA mismatch repair protein [Vibrio splendidus 12B01]
Length=861

 Score =  263 bits (673),  Expect = 2e-68
 Identities = 177/563 (31%), Positives = 302/563 (53%), Gaps = 44/563 (7%)

Query  302  LDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLN  361
            LD A  R L + Q     T    +L+ +L+   T  G R++ +W+ QP+ + + +++RL+
Sbjct  274  LDAATRRNLEITQNLSGGT--DNTLSEVLDHTATAMGSRMLKRWLHQPMRNISALDQRLD  331

Query  362  LVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQAL  421
             +   ++D  L   LQ  L ++  D+ R+  +   ++A  +D  RL Q +  LP + + L
Sbjct  332  AIGE-MKDLALFTELQPTL-KQIGDIERILARLALRSARPRDMARLRQAMEYLPELAETL  389

Query  422  EKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQ--VENHEFLVKPSFDPNLS  479
             +   KH       ++T L    S   +  E++E  +  +   V     ++   ++  L 
Sbjct  390  TQL--KHP------YLTQLAQYASPVDEVSELLERAIKENPPVVIRDGGVIAEGYNAELD  441

Query  480  ELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEE---------  530
            E R++     + +           G+D    +K+  +   G++ +V+  +          
Sbjct  442  EWRDLAAGATEFLDKLEQEERERHGIDT---LKVGYNNVHGFFIQVSRGQSHLVPPHYVR  498

Query  531  -KVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYV  589
             + L+N + +   +++++  K  +SK  +L              +  + +E+ ++   Y+
Sbjct  499  RQTLKNAERYIIPELKEHEDKVLSSKSKALAI------------EKKLWEELFDLLLPYL  546

Query  590  EPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIA  649
            E +Q +   ++QLD + + A  ++   + Y RP + E    +I  +A RH  VE   +  
Sbjct  547  ERLQNIASSVSQLDVLQNLAERAD--TLDYCRPTMTESAGVQI--QAGRHPVVEQVMDEP  602

Query  650  FIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCIL  709
            FI N +     ++M  IITGPNMGGKSTY+RQT +I LMA IGC+VP ESA +  +D I 
Sbjct  603  FIANPIDLNDQRKML-IITGPNMGGKSTYMRQTALIALMAHIGCYVPAESATIGSIDRIF  661

Query  710  ARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEY  769
             R+GA D    G STFM EM ETA+IL +AT +SL+++DE+GRGTSTYDG  LAWA +E+
Sbjct  662  TRIGASDDLASGRSTFMVEMTETANILHNATPNSLVLMDEIGRGTSTYDGLSLAWASAEW  721

Query  770  IATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIH  829
            +A +I A  +FATH+ ELT L NQIPT+ N+H+ A+   +++  ++ V++G   +S+G+ 
Sbjct  722  LANQINAMTLFATHYFELTELPNQIPTLANVHLDAVEHGDSIAFMHAVQEGAASKSYGLA  781

Query  830  VAELANFPKHVIECAKQKALELE  852
            VA LA  PK VI+ A+ K  +LE
Sbjct  782  VAGLAGVPKAVIKNARAKLTQLE  804


>gi|42518561|ref|NP_964491.1|  DNA mismatch repair protein [Lactobacillus johnsonii NCC 533]
Length=857

 Score =  263 bits (672),  Expect = 2e-68
 Identities = 196/594 (32%), Positives = 304/594 (51%), Gaps = 50/594 (8%)

Query  293  TFDFSQYMKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMD  352
            +++ +QY+++       L L + S + +    SL  LL+K  T  G RL+  WI++PL+ 
Sbjct  247  SYEPTQYLQMSHTVQTNLELIK-SAKTSKKMGSLFWLLDKTSTAMGGRLLKSWIERPLLS  305

Query  353  KNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGIN  412
               I  R  +V+A ++D   R+ +  D L+   DL RL  +    + N ++  +L   + 
Sbjct  306  VTEITRRQEMVQALLDDYFTREKVI-DSLKGVYDLERLTGRIAFGSVNAREMLQLAHSLG  364

Query  413  QLPNVIQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEF-LVK  471
             +P ++ AL +    H +   A  + PL  +         ++ T +D   +   E  L++
Sbjct  365  AIPEILNALLETNNPHLQNF-AKQIDPLKGIHD------LIVNTIVDNPPLPTTEGGLIR  417

Query  472  PSFDPNLSELREIMNDLEKKMQSTLISAARDL-GLDPGKQIKLDSSAQFGYYFRVTCKEE  530
                  L   R+ MN+  KK  S + S  R++ G++    +K+  +  FGYY  VT   +
Sbjct  418  EGVSEQLDRYRDAMNN-GKKWLSEMESHEREVTGIN---NLKVGYNKVFGYYIEVTNSNK  473

Query  531  -----------KVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVK  579
                       + L N + + T D++++      ++  S   EY           D  VK
Sbjct  474  SKVPTDRYTRKQTLTNAERYITPDLKEHEALILEAEAKSTGLEY-----------DLFVK  522

Query  580  EIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRH  639
               ++   Y+  +Q L   +A LD + +FA VS      YVRP  +   Q  I +   RH
Sbjct  523  LREDVKK-YIPALQKLAKQIASLDVLTNFATVSEQNN--YVRPNFVTDKQ-EINVVNGRH  578

Query  640  ACVE-VQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCE  698
              VE V    ++IPNDV  ++D  +F +ITGPNM GKSTY+RQ  +I +MAQIG FVP +
Sbjct  579  PVVEQVMTAGSYIPNDVKMDQDTNIF-LITGPNMSGKSTYMRQMALIAIMAQIGSFVPAD  637

Query  699  SAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYD  758
            SA + I D I  R+GA D  + G STFM EM E    L+ ATK SL++ DE+GRGT+TYD
Sbjct  638  SATLPIFDQIFTRIGAADDLISGQSTFMVEMSEANDALQHATKRSLVLFDEIGRGTATYD  697

Query  759  GFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVK  818
            G  LA AI +Y+  K+GA  +FATH+HELT L   +  + N+HV A      L  L+++ 
Sbjct  698  GMALAGAIVKYLHDKVGAKALFATHYHELTDLDQTLKHLKNIHVGATEENGKLIFLHKIL  757

Query  819  KGVCDQSFGIHVAELANFPKHVIECAKQKALELEEFQYIGESQGYDIMEPAAKK  872
             G  DQS+GIHVA+LA  P  V+  A      LE+       QG   ++PA+++
Sbjct  758  PGPADQSYGIHVAQLAGLPHKVLREATTMLKRLEK-------QGASELQPASEQ  804


>gi|90962103|ref|YP_536019.1|  DNA mismatch repair protein [Lactobacillus salivarius subsp. 
salivarius UCC118]
Length=876

 Score =  263 bits (671),  Expect = 3e-68
 Identities = 202/660 (30%), Positives = 338/660 (51%), Gaps = 31/660 (4%)

Query  260  EMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLFQGSVED  319
            ++EN V V  +  +I +L++    +         ++ SQY+K+D  A R L L + ++  
Sbjct  214  DVENSVEVEVIKHLITYLKITQKRALSHLQRAVHYEPSQYLKMDYHAKRNLELLR-NLRT  272

Query  320  TTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQED  379
               S +L  LL+  KT  G RL+ QWI +PL++   IE R ++VE  +     R  LQE+
Sbjct  273  QKKSGTLLWLLDSTKTAMGGRLLKQWIDRPLINLKEIEARQSMVENLLTHYFERSGLQEE  332

Query  380  LLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEK--HEGKHQKLLLAVFV  437
            L+  + DL RLA K    + N +D  +L   +  +P +   +++   +G   ++   +  
Sbjct  333  LVNVY-DLERLAGKVAFGSVNGRDLIQLRTSLEHIPQIRYIIQELNDDGTFDEIFDKL--  389

Query  438  TPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIMNDLEKKMQSTLI  497
             P+ D+       ++ IE    +   + +  L+KP +   L E  + M + +  +     
Sbjct  390  DPIEDIAD---LIEQAIEDEPPISVTDGN--LIKPGYSQELDEYVDAMKNGKAWLAELEA  444

Query  498  SAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLT  557
               +  G++    +K+  +  FGYY  V+      L  ++ +       N  +F   +L 
Sbjct  445  KERQATGIN---NLKIGFNRVFGYYIEVSKGNLSKLPEDR-YQRKQTLTNAERFITPELK  500

Query  558  SLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPV  617
                     +++ +E +  I   I +     ++ +Q L   +A LD + SFA VS     
Sbjct  501  EKESLILGAESKAKELEYKIFTGIRDQIKDEIQRIQELAGAVAALDVLQSFATVSEQGH-  559

Query  618  PYVRPAILEKGQGRIILKASRHACVE-VQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKS  676
             +V+P +       + +K   H  VE V  + ++IPND+  + D  +  +ITGPNM GKS
Sbjct  560  -FVKPELTTDNHS-LDIKDGWHPVVEKVMGKQSYIPNDIKMDDDLDVL-LITGPNMSGKS  616

Query  677  TYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASIL  736
            TY+RQ  + V++AQIGCFVP +SA++ I D I  R+GA D  + G STFM EM ET   L
Sbjct  617  TYMRQLALTVVIAQIGCFVPAKSAKMPIFDQIFTRIGAADDLISGESTFMVEMKETNVAL  676

Query  737  RSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPT  796
             +AT++SL++ DE+GRGT+TYDG  LA AI EY+   I A  +F+TH+HELT L   +  
Sbjct  677  MNATRNSLLLFDEIGRGTATYDGMALAQAIIEYVHNNIHAKTLFSTHYHELTILDESLDK  736

Query  797  VNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQ--KALELEEF  854
            + N+HV A+     L  L+++++G  D+S+GIHVA+LA  P  +++ A      LE E  
Sbjct  737  LQNVHVGAIEKNGELIFLHKMQEGPADKSYGIHVAKLAGMPDKLLKRADSILNKLESEND  796

Query  855  QYIGESQGYDIMEPAAKKCYLEREQGE--KIIQEFLSKVKQMPFTEMSEENITIKLKQLK  912
              +  ++ Y     A +K   E+ + E  +I +E LS  +  P     + N +  LK++K
Sbjct  797  FTVDSTESY-----AEEKHIEEKNENETSEIQEEQLSLFQ--PEAVSLDSNQSKILKEIK  849


>gi|68551067|ref|ZP_00590496.1|  MutS 1 protein [Pelodictyon phaeoclathratiforme BU-1]
Length=903

 Score =  263 bits (671),  Expect = 3e-68
 Identities = 199/716 (27%), Positives = 353/716 (49%), Gaps = 75/716 (10%)

Query  162  GVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQIIQRGG  221
            GV ++D    +  +           L+  ++ + P E ++   E   +  +L +      
Sbjct  177  GVAFIDVTTAEFKIASL----HIEELKDFVLSLHPSEVLVSSAEK--ERSELLKKALSSE  230

Query  222  ILITERKKADFSTKDIYQDLNRLLK----------GKKGEQMNSAVLPEMENQVAVSSLS  271
             L+TE     FS     + L+R  K          G +  ++ +AV+ +   +   + L 
Sbjct  231  TLVTELDSWMFSEDQAQEVLSRQFKTHSLKGFGIDGNRAGRVAAAVILQYIEETRQNRLH  290

Query  272  AVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLFQGSVEDTTGSQSLAALLN  331
             + +  EL S               ++YM LD+   R L +   S++D T + SL  +++
Sbjct  291  YITRIGELHS---------------AEYMTLDLQTKRNLEIIS-SMQDGTQNGSLLQVID  334

Query  332  KCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLA  391
            + + P G RL+ +W+++PL   + I  RL+ V    E  E+R+ L E L     DL R  
Sbjct  335  RTRNPMGARLLRRWLQRPLKRVDEIRMRLDAVGELSECREMREALSEQL-SAINDLERCL  393

Query  392  KKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQ  451
             +        ++  +L   ++ +P ++Q L +  G  + + LA  + PL +L +      
Sbjct  394  ARIATFRTIPREVRQLGLSLSAIP-ILQELLREAGSARLIALASNLKPLPELAAS-----  447

Query  452  EMIETTLDMDQVENHEF--LVKPSFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGK  509
              IE  +D +   +      ++  +   L ELR I +  + ++   L     +       
Sbjct  448  --IEQAIDPESGASMRDGGYIRTGYHAELDELRTIASTAKDRL---LQIQQEERAATTIS  502

Query  510  QIKLDSSAQFGYYFRVT----------CKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSL  559
             +K+  +  FGYY  ++           ++++ L N + ++   +++   K  NS+  S 
Sbjct  503  SLKVSFNKVFGYYIEISRANIDKVPAYYEKKQTLVNAERYTIPALKEYEEKILNSEEKSF  562

Query  560  neeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPY  619
                          +  +  ++  + +     +Q    ++A++D++ SFA  ++     Y
Sbjct  563  LL------------EAQLFHDLCLLIAENASAIQENAALIAEIDSLCSFALCAS--EYGY  608

Query  620  VRPAILEKGQGRIILKASRHACVE--VQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKST  677
             +P I+     ++ +   RH  +E  +  E  ++PND +F++ +QM  IITGPNM GKS+
Sbjct  609  CKPEIMT--HEKLAIVGGRHPVLERMMSAEDPYVPNDCHFDEKQQML-IITGPNMAGKSS  665

Query  678  YIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILR  737
            ++RQTG+IVL+AQ G FVP E AE+ +VD I  RVGA D+   G STF+ EM E ASIL 
Sbjct  666  FLRQTGLIVLLAQAGSFVPAERAEIGLVDRIFTRVGASDNLASGESTFLVEMNEAASILN  725

Query  738  SATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPTV  797
            +AT  SL+++DE+GRGTST+DG  +AW++SEYI   IGA  +FATH+HEL  L +++P V
Sbjct  726  NATSKSLLLLDEIGRGTSTFDGMSIAWSMSEYICRSIGARTLFATHYHELAELESRLPGV  785

Query  798  NNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEE  853
             N + T + T +++  L ++ +G  D S+GI VA++A  P  VI  AK+    +E+
Sbjct  786  VNYNATVVETADSVIFLRKIIRGSTDNSYGIEVAKMAGMPAEVISRAKEILAGMEK  841


>gi|68546875|ref|ZP_00586419.1|  MutS 1 protein [Shewanella amazonensis SB2B]
Length=886

 Score =  263 bits (671),  Expect = 3e-68
 Identities = 217/722 (30%), Positives = 355/722 (49%), Gaps = 87/722 (12%)

Query  158  QRQVGVGY--VDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQ  215
            Q +VG G+  +D    +  + E P  +    LEA L +  P E +    E  GDMG +  
Sbjct  172  QGKVGYGFATLDVASGRFVIAELPSREA---LEAELQRTSPAELLY--SEDFGDMGLINH  226

Query  216  IIQRGGILITERKKADFSTKDIYQDLNRLLKGKKGEQMNSAVLPEMENQVAVSSLSAVIK  275
            I  RG     +R++ ++     Y    ++L     EQ  +  L       A  SL A   
Sbjct  227  I--RG-----KRRRPEWEFD--YDTCIKMLL----EQFGTRDLRGFGIADARLSLQAAGC  273

Query  276  FLELLSDDSNFGQFELTT---FDFSQYMKLDIAAVRALNL---FQGSVEDTTGSQSLAAL  329
             ++ + D        + +   F+    + LD A  R L L     GS E+T     LA++
Sbjct  274  LMQYVKDTQRTALPHINSIVRFNQGDSIILDAATRRNLELTVSLSGSRENT-----LASV  328

Query  330  LNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDL---LRRFPD  386
            L+   T  G R++ +WI QPL   + I  R   V+  +E       L EDL   L+   D
Sbjct  329  LDNTVTAMGSRMLQRWIHQPLRCHDTIRGRQQAVQELLETG-----LYEDLRAELKALGD  383

Query  387  LNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVFVTPLTDLRSD  446
            + R+  +   ++A  +D  RL   +  LP + + L++ + +H K         L  L  D
Sbjct  384  IERILARLALRSARPRDFARLRDALGILPLIRERLQRCDARHLK--------SLNILLGD  435

Query  447  FSKFQEMIETTLDMDQVENHEFLVKPS------FDPNLSELREIMNDLEKKMQSTLISAA  500
            F +  E++   +    V+N   L++        +D  L E R++ +     ++   +   
Sbjct  436  FPEEYELLCRAI----VDNPPVLIRDGGVIREGYDSELDEWRKLSDGGIDYLEQMELREK  491

Query  501  RDLGLDPGKQIKLDSSAQFGYYFRVT----------CKEEKVLRNNKNFSTVDIQKNGVK  550
               G+     +K+  +   GYY  V+           +  + L+N + + T ++++   K
Sbjct  492  ERTGI---ATLKVGFNRVHGYYIEVSRAQSALVPIAYQRRQTLKNTERYITPELKEYEEK  548

Query  551  FTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAH  610
              +S+  +L              +  + +E+ ++    ++ +Q      ++LD + +FA 
Sbjct  549  VLSSQGKALAL------------EKQLWEELFDLILPKLQELQDFALAASELDVLANFAD  596

Query  611  VSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYFEKDKQMFHIITGP  670
             ++     Y  P + +     I+++A RH  VE   +  FIPN V     ++M  I+TGP
Sbjct  597  RAD--LFNYHCPELSDTTG--ILIEAGRHPVVERVSQSPFIPNPVELSNHRRML-IVTGP  651

Query  671  NMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEML  730
            NMGGKSTY+RQ  +I LMA IG FVP E A +  VD I  R+GA D    G STFM EM 
Sbjct  652  NMGGKSTYMRQVALITLMAHIGSFVPAERALIGPVDRIFTRIGASDDLASGRSTFMVEMT  711

Query  731  ETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTAL  790
            ETA+IL +AT +SL+++DE+GRGTSTYDG  LAW+ +EY+A K+GA  +FATH+ ELT L
Sbjct  712  ETANILHNATANSLVLMDEIGRGTSTYDGMSLAWSAAEYLAQKLGAMTLFATHYFELTQL  771

Query  791  ANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALE  850
               +P V+N+H+ A+  ++T+  ++ V++G   +S+G+ VA LA  P +VI+ AK K L+
Sbjct  772  PEMLPGVHNVHLDAIEHDDTIAFMHAVQEGAASKSYGLQVAALAGVPANVIKAAKHKLLQ  831

Query  851  LE  852
            LE
Sbjct  832  LE  833


>gi|68208696|ref|ZP_00560793.1|  MutS 1 protein [Desulfitobacterium hafniense DCB-2]
Length=850

 Score =  262 bits (669),  Expect = 4e-68
 Identities = 211/622 (33%), Positives = 308/622 (49%), Gaps = 55/622 (8%)

Query  299  YMKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEE  358
            +M LD    R L L + S+       +L ++L+  KT  G RL+ +WI+QPL+ K  IE+
Sbjct  248  WMLLDPWTRRNLELTE-SIRGQGKKGTLLSVLDFTKTAFGGRLLRRWIEQPLLLKEEIEK  306

Query  359  RLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVI  418
            RL+ VEA VED+ LR  L + L  +  DL RL  K     AN +D   L Q +  LP + 
Sbjct  307  RLDYVEALVEDSFLRGDLIQ-LFNKVFDLERLMGKVSYGTANARDLLSLAQTLGVLPQLR  365

Query  419  QALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNL  478
              L   EGK   L    F+  L  L       ++ I     +   + +  L+K  +   +
Sbjct  366  ALLA--EGKSASL--QAFIPALEGLDPLAVTLEQAINPEAPISLKDGN--LLKAGYSEEI  419

Query  479  SELREIMNDLEKKMQSTLISAARD-LGLDPGKQIKLDSSAQFGYYFRVTCKE--------  529
             ELR I +   K   + L S  +D  G+   + +K+  +  FGYY  VT           
Sbjct  420  DELRSISSG-GKAWVAKLESMEKDRTGI---RSLKVGYNKVFGYYIEVTHANSHLIPAEY  475

Query  530  --EKVLRNNKNFSTVDIQKNGVKFTNS--KLTSLneeytknkteyeeAQDAIVKEIVNIS  585
              ++ L N + F T ++++   K   +  K+T L  +      E    Q A + E  +  
Sbjct  476  IRKQTLANAERFITPELKEYEQKILGAEEKVTQLEYQLFLELRETVRGQAARILEAAH--  533

Query  586  SGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVE-V  644
                         LA++D   S A  +      Y RP +  KG+G + +   RH  VE +
Sbjct  534  ------------ALAEIDVYASLAEAA--VRHHYSRPVM--KGEGGLTIIEGRHPVVESM  577

Query  645  QDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSI  704
              + +F+PND    +DK +  +ITGPNM GKSTY+RQ  +IVLMAQIG FVP + A + I
Sbjct  578  LQDTSFVPNDTILTEDKHLA-LITGPNMAGKSTYMRQVALIVLMAQIGSFVPAQQATIPI  636

Query  705  VDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAW  764
             D I  RVGA D    G STFM EM E A ILR  T  SLII+DE+GRGT+TYDG  +AW
Sbjct  637  ADHIFTRVGASDDLASGQSTFMVEMYEVAHILRHVTPHSLIILDEVGRGTATYDGLSIAW  696

Query  765  AISEYIATKIG-AFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCD  823
            A++EY+A +      +FATH+HELT L      + NLHV      E +  L+++  G  D
Sbjct  697  AVAEYLAGQENKPKTLFATHYHELTDLEETHAGIFNLHVGVREHGEEIVFLHKIIPGRAD  756

Query  824  QSFGIHVAELANFPKHVIECAKQKALELEEFQYIGESQGYDIMEPAAKKCYLEREQGEKI  883
            +S+GI VA+LA  P +++  AK    ELE        +     E A +    E +  + +
Sbjct  757  RSYGIQVAKLAGLPANLLHRAKIILHELESSAKENRQEHLLNKEKATQLSLFEVQPLDPL  816

Query  884  IQEFLSKVKQMPFTEMSEENIT  905
            +QE          +E+S E++T
Sbjct  817  LQE---------VSELSVEDLT  829


>gi|46155973|ref|ZP_00133579.2|  COG0249: Mismatch repair ATPase (MutS family) [Haemophilus somnus 
2336]
Length=859

 Score =  262 bits (669),  Expect = 4e-68
 Identities = 191/622 (30%), Positives = 317/622 (50%), Gaps = 36/622 (5%)

Query  297  SQYMKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRI  356
            S  +++D +  R L L Q     T    +LAA+L+KC TP G RL+ +WI QP+ +  ++
Sbjct  264  SDTVQIDASTRRNLELTQNLAGGT--ENTLAAILDKCVTPMGSRLLKRWIHQPIRNIEKL  321

Query  357  EERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPN  416
            + R   ++  ++   L + LQ  LLR+  D+ R+  +   ++A  +D  RL   + Q+P 
Sbjct  322  QYRQQHIQMLLQQ-NLVEELQP-LLRQVGDMERILARVALRSARPRDLTRLRTALEQIPF  379

Query  417  VIQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPS---  473
            +         +HQ   +  FV   +   +DFS    +++  +    ++N   L++     
Sbjct  380  I---------QHQLTKIPHFVA-FSQQIADFSVQLALLQRAI----IDNPPLLIRDGGVI  425

Query  474  ---FDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEE  530
               ++  L E R +     + ++        + G+D    +K+  +A  GYY +++  + 
Sbjct  426  AEGYNEELDEWRSLSEGATRYLKDLEQRERANTGIDT---LKIGFNAVHGYYIQIS--QG  480

Query  531  KVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVE  590
            +  +   ++      KN  ++   +L +  E+  K K      +  +  EI +    ++ 
Sbjct  481  QAHKAPLHYVRRQTLKNVERYIIPELKTYEEKVLKAKGASLALEKQLYDEIFDQLLPHLG  540

Query  591  PMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAF  650
             +Q  +  LA+LD + + A       + YV+P      Q  + +   RH  VE   +  F
Sbjct  541  DLQLASLTLAELDVLTNLAE--RAETLNYVQPQF--STQVGLQIMQGRHPVVEQVLKEPF  596

Query  651  IPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILA  710
            I N V   + + +  IITGPNMGGKSTY+RQT +I LMA IG FVP ESA +  +D I  
Sbjct  597  IANPVELNQKRHLL-IITGPNMGGKSTYMRQTALITLMAYIGSFVPAESAVIGPIDRIFT  655

Query  711  RVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYI  770
            R+GA D    G STFM EM E A+IL  AT+ SL++IDE+GRGTSTYDG  LAWA +E +
Sbjct  656  RIGASDDLASGRSTFMVEMTEMANILHQATEQSLVLIDEIGRGTSTYDGLSLAWACAEQL  715

Query  771  ATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHV  830
            A KI +  +FATH+ ELT L  +I  ++N+H+ A    +++  ++ V++G   +S+G+ V
Sbjct  716  AQKIRSLTLFATHYFELTGLPEKIEGIHNVHLDAFEHNDSIAFMHSVQEGAASKSYGLAV  775

Query  831  AELANFPKHVIECAKQKALELEEFQYIGESQGYDIMEPAAKKCYLEREQGEKIIQEFLSK  890
            A LA  P++VI+ AKQK  +LE        Q   ++     +  L  E  E+     +  
Sbjct  776  AALAGVPQNVIKSAKQKLKQLETLSQQNSYQSQSVLTQVQGELTLMEE--EENTSAVIET  833

Query  891  VKQMPFTEMSEENITIKLKQLK  912
            +K +   E+S +     L QLK
Sbjct  834  LKTLDPNELSPKQALECLYQLK  855


>gi|23467513|ref|ZP_00123094.1|  COG0249: Mismatch repair ATPase (MutS family) [Haemophilus somnus 
129PT]
Length=859

 Score =  262 bits (669),  Expect = 4e-68
 Identities = 190/622 (30%), Positives = 317/622 (50%), Gaps = 36/622 (5%)

Query  297  SQYMKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRI  356
            S  +++D +  R L L Q     T    +LAA+L+KC TP G RL+ +WI QP+ +  ++
Sbjct  264  SDTVQIDASTRRNLELTQNLAGGT--ENTLAAILDKCVTPMGSRLLKRWIHQPIRNIEKL  321

Query  357  EERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPN  416
            + R   ++  ++   L + LQ  LLR+  D+ R+  +   ++A  +D  RL   + Q+P 
Sbjct  322  QCRQQHIQMLLQQ-NLVEELQP-LLRQVGDMERILARVALRSARPRDLTRLRTALEQIPF  379

Query  417  VIQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPS---  473
            +         +HQ   +  FV   +   +DFS    +++  +    ++N   L++     
Sbjct  380  I---------QHQLTKIPHFVA-FSQQIADFSVQLALLQRAI----IDNPPLLIRDGGVI  425

Query  474  ---FDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEE  530
               ++  L E R +     + ++        + G+D    +K+  +A  GYY +++  + 
Sbjct  426  AEGYNEELDEWRSLSEGATRYLKDLEQRERANTGIDT---LKIGFNAVHGYYIQIS--QG  480

Query  531  KVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVE  590
            +  +   ++      KN  ++   +L +  E+  K K      +  +  EI +    ++ 
Sbjct  481  QAHKAPLHYVRRQTLKNAERYIIPELKTYEEKVLKAKGASLALEKQLYDEIFDQLLPHLG  540

Query  591  PMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAF  650
             +Q  +  LA+LD + + A       + YV+P      Q  + +   RH  VE   +  F
Sbjct  541  DLQLASLTLAELDVLTNLAE--RAETLNYVQPQF--STQIGLQIMQGRHPVVEQVLKDPF  596

Query  651  IPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILA  710
            I N V   + + +  IITGPNMGGKSTY+RQT +I LMA IG FVP ESA +  +D I  
Sbjct  597  IANPVELNQKRHLL-IITGPNMGGKSTYMRQTALITLMAYIGSFVPAESAVIGPIDRIFT  655

Query  711  RVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYI  770
            R+GA D    G STFM EM E A+IL  AT+ SL++IDE+GRGTSTYDG  LAWA +E +
Sbjct  656  RIGASDDLASGRSTFMVEMTEMANILHQATEQSLVLIDEIGRGTSTYDGLSLAWACAEQL  715

Query  771  ATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHV  830
            A KI +  +FATH+ ELT L  +I  ++N+H+ A+   + +  ++ +++G   +S+G+ V
Sbjct  716  AQKIRSLTLFATHYFELTVLPEKIDGIHNVHLDAIEHNDNIAFMHSIQEGAASKSYGLAV  775

Query  831  AELANFPKHVIECAKQKALELEEFQYIGESQGYDIMEPAAKKCYLEREQGEKIIQEFLSK  890
            A LA  P++VI+ AKQK  +LE        Q   ++     +  L  E  E+     +  
Sbjct  776  AALAGVPQNVIKSAKQKLKQLETLSQQNSCQSQSVLTQVQGELTLMEE--EENTSAVIET  833

Query  891  VKQMPFTEMSEENITIKLKQLK  912
            +K +   E+S +     L QLK
Sbjct  834  LKTLDPNELSPKQALECLYQLK  855


>gi|77684057|ref|ZP_00799496.1|  MutS 1 protein [Alkaliphilus metalliredigenes QYMF]
Length=880

 Score =  262 bits (669),  Expect = 4e-68
 Identities = 181/591 (30%), Positives = 303/591 (51%), Gaps = 29/591 (4%)

Query  291  LTTFDFSQYMKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPL  350
            +  +   + M LDI   + L L + ++   +   SL  +L+K  T  G R++ +WI+ PL
Sbjct  262  INVYSIHEKMTLDINTRKNLELTE-TIRSKSKKGSLLGVLDKTSTAMGGRMLRKWIEAPL  320

Query  351  MDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQG  410
            +D   I +RL  V+   E  ELRQ L+E L ++  DL RLA K    +   +D   L   
Sbjct  321  IDPVIINKRLEAVQLLKEQIELRQELKESL-KKIYDLERLAGKISYGSVTPRDLIALKNS  379

Query  411  INQLPNVIQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTL--DMDQVENHEF  468
            ++ LP++I  LEK +G+  + L+   + PL ++ S       ++E ++  D         
Sbjct  380  LSYLPSIINGLEKIQGETFQSLVQS-IDPLDEVHS-------LVELSILEDAPLSSKDGG  431

Query  469  LVKPSFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCK  528
            +++  +   + EL+    +  + +         + G+   K +K+  +  FGYY  +T  
Sbjct  432  IIQEGYHKEVDELKNASTEGRQWIAQLEQKERVNSGI---KSLKIKYNKIFGYYIEITKS  488

Query  529  EEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGY  588
               ++     +       N  ++   +L  +  +    + +    +  +  E+    +  
Sbjct  489  NLSMVPTE--YIRKQTLANCERYVTPELKEIESKILGAEEKVILLEYHLFIEVREKIAHE  546

Query  589  VEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQ-DE  647
            +  +Q     +A+LD + SFA ++  A   +++P I    + +I+    RH  VE+  ++
Sbjct  547  ITRIQQTARAIAELDVLYSFAEIA--AENNFIKPHINTSNEIKIV--EGRHPVVELTFNK  602

Query  648  IAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDC  707
             +F+PND Y +       IITGPNM GKSTY+RQ  +IVLMAQIG FVP   A + IVD 
Sbjct  603  ESFVPNDTYMDNRDCSMSIITGPNMAGKSTYMRQVALIVLMAQIGSFVPASEASIGIVDR  662

Query  708  ILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAIS  767
            I  R+GA D   +G STFM EM E A+IL +AT +SL+I+DE+GRGTST+DG  +AWA+ 
Sbjct  663  IFTRIGASDDLAQGHSTFMVEMSEMANILNNATANSLVILDEIGRGTSTFDGLSIAWAVI  722

Query  768  EYIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFG  827
            EY+     +  +F+TH+HELT L  +I  V N ++      E +  L +V  G   +S+G
Sbjct  723  EYMQQYKKSKTLFSTHYHELTELEGKIQGVKNYNILVEEDGEEIVFLRKVVSGSTSKSYG  782

Query  828  IHVAELANFPKHVIECAKQKALELEEFQYIGESQGYDIMEPAAKKCYLERE  878
            I VA+LA  P + +  A++   +LE+       +  +I  PA ++  L RE
Sbjct  783  IQVAKLAGLPLNTLIRAQEILSDLEK-------KNNEIKIPAEEEIALSRE  826


>gi|68056087|ref|ZP_00540221.1|  MutS 1 protein [Exiguobacterium sibiricum 255-15]
Length=843

 Score =  262 bits (669),  Expect = 4e-68
 Identities = 186/570 (32%), Positives = 296/570 (51%), Gaps = 36/570 (6%)

Query  294  FDFSQYMKLDIAAVRALNLFQGSVEDTTGSQ--SLAALLNKCKTPQGQRLVNQWIKQPLM  351
            ++ + +M+L+   V+ L L + +    TG +  SL  LL+   T  G R++ +W+++PL+
Sbjct  239  YEAADFMQLEPNTVKNLELVRSA---RTGDKKGSLLGLLDVTGTAMGGRMLKRWLEKPLL  295

Query  352  DKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGI  411
             ++ I ERL+ VE  +     RQ L+ D LR   DL RL  K     A+ +D  +L   +
Sbjct  296  SQHTIAERLDAVEELLAHYFERQQLK-DTLREVYDLERLVAKVGYGTASARDLVQLKSTL  354

Query  412  NQLPNVIQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEF---  468
              +P +  ALE+           +F   L  L        E+ +  LD   VE       
Sbjct  355  RLIPRIQAALEE-----------LFSDRLGQLALGLDPHDELTDL-LDRAFVEAPPISTK  402

Query  469  ---LVKPSFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRV  525
               +++  FDP L EL     D +  + +   S  +  G+   K +K+  +  FGYY  V
Sbjct  403  DGGMIRTGFDPALDELLVASKDGKTWLATLEASERQATGI---KTLKIGYNRVFGYYIEV  459

Query  526  TCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNIS  585
            +    K+L   + +       N  ++   +L          + +    +  +  ++ +  
Sbjct  460  SRANAKLLPEGR-YERKQTLANAERYVTPELKEKEALILGAEEKSITLEYELFCQVRDQV  518

Query  586  SGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGR-IILKASRHACVE-  643
              ++E +Q ++  +A+LD +V+ A  +      YVRP  L    GR ++++  RH  +E 
Sbjct  519  KTHIESLQRVSRRIAELDVLVALAETAERHD--YVRPVTLT---GRNVMIENGRHPVIET  573

Query  644  VQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVS  703
            V     ++ N +   +D++M  +ITGPNM GKSTY+RQ  +I L+ QIG FVP   AE+ 
Sbjct  574  VLPRGEYVANGINLNEDREML-LITGPNMSGKSTYMRQFALIALLHQIGSFVPASRAELP  632

Query  704  IVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLA  763
            I D I  R+GA D  + G STFM EM+ET   L  AT  SLI++DE+GRGTSTYDG  LA
Sbjct  633  IFDQIFTRIGAADDLVSGQSTFMVEMVETQEALTRATDRSLILLDEIGRGTSTYDGMALA  692

Query  764  WAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCD  823
             AI E+IA  +GA  +F+TH+HELT L + +P + N+HV A+  +  +  L++V+ G  D
Sbjct  693  QAIVEHIAEHVGAKTLFSTHYHELTVLEDSMPRLANVHVRAVEQDGRVVFLHEVRDGKAD  752

Query  824  QSFGIHVAELANFPKHVIECAKQKALELEE  853
            QS+GIHVA LA+ P  +I  A+    E E+
Sbjct  753  QSYGIHVARLADLPDALIARAEVLLSEFEQ  782


>gi|15903929|ref|NP_359479.1|  DNA mismatch repair protein [Streptococcus pneumoniae R6]
Length=857

 Score =  261 bits (668),  Expect = 6e-68
 Identities = 190/627 (30%), Positives = 317/627 (50%), Gaps = 38/627 (6%)

Query  294  FDFSQYMKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDK  353
            ++   ++++D A   +L+L + +        SL  LL++ KT  G RL+  WI +PL+DK
Sbjct  257  YEIKDFLQMDYATKASLDLVENA-RSGKKQGSLFWLLDETKTAMGMRLLRSWIHRPLIDK  315

Query  354  NRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQ  413
             RI +R  +V+ F++    R  L  D L+   D+ RLA +      N +D  +L   ++ 
Sbjct  316  ERIVQRQEVVQVFLDHFFERSDLT-DSLKGVYDIERLASRVSFGKTNPKDLLQLATTLSS  374

Query  414  LPNVIQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTL--DMDQVENHEFLVK  471
            +P +   LE  E    +  LA  +  L  +     + + +I   +  +   V     +++
Sbjct  375  VPRIRAILEGME----QPTLAYLIAQLDAI----PELESLISAAIAPEAPHVITDGGIIR  426

Query  472  PSFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEK  531
              FD  L + R ++ +    +         + G+     +K+D + + GYYF VT    +
Sbjct  427  TGFDETLDKYRCVLREGTSWIAEIEAKERENSGIST---LKIDYNKKDGYYFHVT--NSQ  481

Query  532  VLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEP  591
            +     +F      KN  +F   +L  +  +  + + +    +  I   I      Y++ 
Sbjct  482  LGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMRIREEVGKYIQR  541

Query  592  MQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVE-VQDEIAF  650
            +Q L   +A +D + S A V+    +  +RP   +  Q  I ++  RHA VE V     +
Sbjct  542  LQALAQGIATVDVLQSLAVVAETQHL--IRPEFGDDSQ--IDIRKGRHAVVEKVMGAQTY  597

Query  651  IPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILA  710
            IPN +   +D  +  ++TGPNM GKSTY+RQ  +  +MAQ+G +VP ESA + I D I  
Sbjct  598  IPNTIQMAEDTSI-QLVTGPNMSGKSTYMRQLAMTAVMAQLGSYVPAESAHLPIFDAIFT  656

Query  711  RVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYI  770
            R+GA D  + G STFM EM+E  + +  ATK+SLI+ DELGRGT+TYDG  LA +I EYI
Sbjct  657  RIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGTATYDGMALAQSIIEYI  716

Query  771  ATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHV  830
               IGA  +FATH+HELT+L + +  + N+HV  L  +  +T L++++ G  D+S+GIHV
Sbjct  717  HEHIGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFLHKIEPGPADKSYGIHV  776

Query  831  AELANFPKHVIECAKQKALELEEFQYIGESQGYDIMEPAAKK-------CYLEREQGEKI  883
            A++A  P  ++  A +   +L       E+QG +   P  +           +R +   I
Sbjct  777  AKIAGLPADLLARADKILTQL-------ENQGTESPPPMRQTSAVTEQISLFDRAEEHPI  829

Query  884  IQEFLSKVKQMPFTEMSEENITIKLKQ  910
            + E L+K+     T M   N+ ++LKQ
Sbjct  830  LAE-LAKLDVYNMTPMQVMNVLVELKQ  855


>gi|67941865|ref|ZP_00533853.1|  DNA mismatch repair protein MutS, C-terminal:MutS III:MutS IV 
[Chlorobium phaeobacteroides BS1]
Length=668

 Score =  261 bits (668),  Expect = 6e-68
 Identities = 189/599 (31%), Positives = 307/599 (51%), Gaps = 39/599 (6%)

Query  267  VSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLFQGSVEDTTGSQSL  326
            V +  A I +L     D      +L+  D  +++ LD   +R L L      D     +L
Sbjct  29   VIAAGACIHYLLETQHDKIDHVSKLSRIDEGRFVWLDKFTIRNLELVSPLSPDAV---TL  85

Query  327  AALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPD  386
              +++   +P G R++ +WI  PL D   I +R N+V+  ++  +  + L E++ ++  D
Sbjct  86   LDIIDHTASPMGARMMRRWITLPLKDLKSINDRHNIVDFLIKQNDFERQLHEEI-KKTGD  144

Query  387  LNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAV---FVTPLTDL  443
            L RL  K      N ++       + QL   +QA+E+ +    KL L +    + P+ D 
Sbjct  145  LERLISKVATLRVNPRE-------LVQLKRALQAVERLK----KLCLDMNHEALKPVADQ  193

Query  444  RSDFSKFQEMIETTLDMDQVENHEF--LVKPSFDPNLSELREIMNDLEKKMQSTLISAAR  501
             +D     + +   L+ D   +     ++       L ELR +     K+   TL+  A+
Sbjct  194  LNDCPVLVQKLSKELNEDTPASLSKGNIIAAGVLSELDELRGLAGQ-GKEFLKTLV--AK  250

Query  502  DLGLDPGKQIKLDSSAQFGYYFRVT-CKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLn  560
            ++       +K+  +  FGYY  VT   ++KV        T+       ++   +L    
Sbjct  251  EIERTGISSLKIGFNNVFGYYLEVTNTHKDKVPEEWHRKQTLT---GSERYITEELKEYE  307

Query  561  eeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVS--NGAPVP  618
             +    + +    +    + +V+ S+G+++P+Q    ++A LD + SFA VS  N    P
Sbjct  308  SKILGAEEKIAHLEQKHFELLVHFSAGFIDPVQLNAKLIAGLDCLDSFARVSLDNNYKRP  367

Query  619  YVRPAILEKGQGRIILKASRHACVE--VQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKS  676
            ++   +       I +K  RH  +E  +    ++I NDVY +  KQ   +ITGPNM GKS
Sbjct  368  HLNDGLA------IDIKGGRHPVIEKNLPPGESYIANDVYLDHGKQQIIMITGPNMSGKS  421

Query  677  TYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASIL  736
              +RQT +IVLMAQ+GCFVP  +A++ +VD +  RVGA D+   G STFM EM ETASIL
Sbjct  422  ALLRQTALIVLMAQMGCFVPATAAKIGVVDKLFTRVGASDNISSGESTFMVEMNETASIL  481

Query  737  RSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIAT--KIGAFCMFATHFHELTALANQI  794
             + +  SLI++DE+GRGTSTYDG  +AW+I+EY+ +     A  +FATH+HEL  +A  +
Sbjct  482  NNISNRSLILLDEIGRGTSTYDGISIAWSIAEYLHSHPAYRAKVLFATHYHELNEMAGTM  541

Query  795  PTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEE  853
              + N HV+     E +  L ++KKG  + SFGIHVAE+A  P+ V+E A+Q    LE+
Sbjct  542  SRIKNYHVSVKEIGEKVIFLRKLKKGGSEHSFGIHVAEMAGMPRKVVERARQMLKVLEK  600


>gi|59711141|ref|YP_203917.1|  DNA mismatch repair protein [Vibrio fischeri ES114]
Length=919

 Score =  261 bits (667),  Expect = 8e-68
 Identities = 176/566 (31%), Positives = 297/566 (52%), Gaps = 44/566 (7%)

Query  302  LDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLN  361
            LD A  R L + Q        + +LA +L+   T  G RL+ +W+ QP+   + + +RL+
Sbjct  333  LDAATRRNLEITQNLAGGF--NHTLAEILDHTSTAMGSRLLKRWLHQPVRTHDVLNQRLD  390

Query  362  LVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQAL  421
             +    E         +  L+   D+ R+  +   ++A  +D  RL   + QLP + Q  
Sbjct  391  AIGELKESGLFADMAPQ--LKNIGDVERILARLALRSARPRDLARLRNALQQLPELSQTT  448

Query  422  EKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQ--VENHEFLVKPSFDPNLS  479
            ++ +  H  L LA    P+  +        E++E  +  +   V     ++   ++  L 
Sbjct  449  QEFQQDHL-LTLAASAQPIDSIC-------ELLERAIKENPPVVIRDGGVLADGYNEELD  500

Query  480  ELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEE---------  530
            + R++ N   + ++           +D    +K+  +   G+Y +++  +          
Sbjct  501  QWRDLANGATQYLEKLEQEERERHDIDT---LKVGYNNVHGFYIQISKGQSHKAPAHYVR  557

Query  531  -KVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYV  589
             + L+N + +   +++++  K  NSK  +L              +  + +E+ +    ++
Sbjct  558  RQTLKNAERYIIPELKEHEDKVLNSKSKALAI------------EKRLWEELFDQLLPHL  605

Query  590  EPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIA  649
            E +Q++ + +++LD + + A  ++   + Y RP +L K  G I ++  RH  VE      
Sbjct  606  EQLQSMANAISELDVLSNLAERAD--TLNYCRP-VLTKETG-INIEGGRHPVVEQVMSDP  661

Query  650  FIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCIL  709
            FI N +    D++M  IITGPNMGGKSTY+RQT +I LMA +GC+VP +SAE+  +D I 
Sbjct  662  FIANPIKLNPDRKML-IITGPNMGGKSTYMRQTALIALMAHVGCYVPADSAEIGTLDRIF  720

Query  710  ARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEY  769
             R+GA D    G STFM EM ETA+IL +ATK SL+++DE+GRGTSTYDG  LAWA +E+
Sbjct  721  TRIGASDDLASGRSTFMVEMTETANILHNATKHSLVLMDEIGRGTSTYDGLSLAWASAEW  780

Query  770  IATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIH  829
            +ATKI A  +FATH+ ELT L N    + N+H+ A+   + +  ++ V++G  ++S+G+ 
Sbjct  781  LATKINAMTLFATHYFELTELPNLFTGLANVHLDAVEHGDEIAFMHAVQEGAANKSYGLA  840

Query  830  VAELANFPKHVIECAKQKALELEEFQ  855
            VA LA  PK VI+ AKQK   LE  Q
Sbjct  841  VASLAGVPKSVIKKAKQKLQHLESGQ  866


>gi|89075067|ref|ZP_01161508.1|  DNA mismatch repair protein [Photobacterium sp. SKA34]
Length=859

 Score =  261 bits (667),  Expect = 8e-68
 Identities = 177/570 (31%), Positives = 299/570 (52%), Gaps = 58/570 (10%)

Query  302  LDIAAVRALNLFQ---GSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEE  358
            LD A  R L L Q   G  ++T     LA++L++  TP G RL+ +W+ QP+ D+ ++  
Sbjct  268  LDAATRRNLELTQNLAGGYDNT-----LASVLDQTATPMGSRLLKRWLHQPIRDQKQLNG  322

Query  359  RLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVI  418
            RL+ +EAF             +LR   DL R+  +   ++A  +D  R+   +  LP + 
Sbjct  323  RLDAIEAFKNSGMFVDV--SGVLRHMGDLERILARLALRSARPRDLARMRTAMQYLPELA  380

Query  419  QALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVK------P  472
            +           LL+ +    + DL +  +   ++ E  L+   +EN   +++      P
Sbjct  381  E-----------LLVEIPQVRINDLATHAAPMDDLCEL-LEHAIIENPPVIIRDGGVLAP  428

Query  473  SFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEE--  530
             ++  L E R++ +   K ++    S      +D    +K+  +   G++ +V+  +   
Sbjct  429  GYNAELDEWRDLADGATKFLEELEASEREHHDID---SLKVGFNQVHGFFIQVSRGQSHL  485

Query  531  --------KVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIV  582
                    + L+N + +   +++++  K  NSK  +L              +  + +E+ 
Sbjct  486  VPSHYVRRQTLKNAERYIIPELKEHEDKVLNSKSKALAL------------EKKLWEELF  533

Query  583  NISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACV  642
            +    ++E +Q     L++LD + + A  ++   + Y RP ++   +  I + A RH  V
Sbjct  534  DKLLPHLEQLQNTASALSELDVLTNLAERADS--LNYCRPELMT--ETGIEITAGRHPVV  589

Query  643  EVQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEV  702
            E      FI N +   + ++M  IITGPNMGGKSTY+RQT +I LMA +G FVP E+ ++
Sbjct  590  EHVLSEPFIANPISLHQSRRML-IITGPNMGGKSTYMRQTALIALMAHVGSFVPAEAVKI  648

Query  703  SIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGL  762
              +D I  R+GA D    G STFM EM ETA+IL +ATK SL+++DE+GRGTSTYDG  L
Sbjct  649  GPLDRIFTRIGASDDLASGRSTFMVEMTETANILHNATKQSLVLMDEIGRGTSTYDGLSL  708

Query  763  AWAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVC  822
            AWA +E++A KI A  +FATH+ ELT L + +  + N+H+ A+   + +  ++ V++G  
Sbjct  709  AWASAEWLADKISAMTLFATHYFELTELPSLLTGLANVHLDAVEHGDEIAFMHAVQEGAA  768

Query  823  DQSFGIHVAELANFPKHVIECAKQKALELE  852
             +S+G+ VA LA  PK VI+ AK K  +LE
Sbjct  769  SKSYGLAVASLAGVPKTVIKRAKIKLQQLE  798


>gi|75428413|ref|ZP_00731683.1|  mutS-like ATPases involved in mismatch repair, family 2 [Actinobacillus 
succinogenes 130Z]
Length=858

 Score =  261 bits (667),  Expect = 8e-68
 Identities = 191/629 (30%), Positives = 316/629 (50%), Gaps = 47/629 (7%)

Query  297  SQYMKLDIAAVRALNL---FQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDK  353
            S  ++LD A  R L L     G  E+T     LA++L+KC TP G RL+ +WI QP+   
Sbjct  261  SDTVQLDAATRRNLELTRNLSGGTENT-----LASVLDKCVTPMGSRLLKRWIHQPIRKI  315

Query  354  NRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQ  413
             ++ +R   + A ++D +L   LQ  LLR+  D+ R+  +   + A  +D  RL   + Q
Sbjct  316  QKLRQRQQTIAAILQD-DLIDELQP-LLRQVGDMERILARVALRTARPRDLTRLRTALEQ  373

Query  414  LPNVIQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVK--  471
            LP + Q ++  +           +T L+    +F++  ++++  +    +++   L++  
Sbjct  374  LPQLQQIIKTLQN----------LTALSQPMGEFAELCDLLQRAI----IDSPPLLIRDG  419

Query  472  ----PSFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTC  527
                P +   L E R + +   + +           G+D    +K+  +A  GYY +++ 
Sbjct  420  GVIAPGYHAELDEWRSLADGATQYLADLERRERESTGIDT---LKIGYNAVHGYYIQIS-  475

Query  528  KEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSG  587
             + +      ++      KN  ++   +L +  ++  K K      +  + +EI +    
Sbjct  476  -QGQAHNAPMHYVRRQTLKNAERYIIPELKTYEDKVLKAKGAALALEKQLYEEIFDQLLP  534

Query  588  YVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDE  647
            ++  +Q  +  LA+LD + + A       + YV P      +  + ++  RH  VE   +
Sbjct  535  HLAALQLSSMTLAELDVLTNLAE--RAETLNYVCPEF--SPEIGVEIQNGRHPVVEQVLK  590

Query  648  IAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDC  707
              FI N V     +++  +ITGPNMGGKSTY+RQT +I LMA +G FVP E A +  +D 
Sbjct  591  EPFIANPVCLNPQRRLL-VITGPNMGGKSTYMRQTALITLMAYMGGFVPAERAVIGPIDR  649

Query  708  ILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAIS  767
            I  R+GA D    G STFM EM E A+IL  AT DSL++IDE+GRGTSTYDG  LAWA +
Sbjct  650  IFTRIGASDDLASGRSTFMVEMTEMANILHQATADSLVLIDEIGRGTSTYDGLSLAWACA  709

Query  768  EYIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFG  827
            E++A K+ +  +FATH+ ELT L  Q     N+H+ AL  + T+  ++ V+ G   +S+G
Sbjct  710  EWLAKKLRSLTLFATHYFELTVLPEQFAGTANVHLDALEHDNTIAFMHAVQDGAASKSYG  769

Query  828  IHVAELANFPKHVIECAKQKALELEEFQYIGESQGYD----IMEPAAKKCYLEREQGEKI  883
            + VA LA  P+ VI+ AKQK  +LE+       Q       + +   +   +E + G+  
Sbjct  770  LAVAALAGVPQQVIKLAKQKLAQLEKLSAQSADQKLQDLRTLHQMQGELALMEEDDGKNA  829

Query  884  IQEFLSKVKQMPFTEMSEENITIKLKQLK  912
              E L K+      E+S +     L QLK
Sbjct  830  ALEMLEKLDP---DELSPKQALAYLYQLK  855


>gi|48853484|ref|ZP_00307654.1|  COG0249: Mismatch repair ATPase (MutS family) [Cytophaga hutchinsonii]
Length=856

 Score =  261 bits (666),  Expect = 1e-67
 Identities = 199/654 (30%), Positives = 319/654 (48%), Gaps = 31/654 (4%)

Query  267  VSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLFQGSVEDTTGSQSL  326
            ++S  A++ +L             +   +  +Y+ LD   +R L L      +      L
Sbjct  222  ITSAGAILHYLNETEHKEVAHITRVNRIEEERYVWLDRFTIRNLELVNAQQLEGV---PL  278

Query  327  AALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPD  386
              +L+  KTP G RL+ +W+  PL +   I+ERL+ VE  V++ EL  TL ++L +   D
Sbjct  279  IEILDHTKTPMGARLLKKWLILPLKELTPIQERLDTVELLVKNKELTTTLVDEL-KPIGD  337

Query  387  LNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVFVTPLTDLRSD  446
            L RL  K   +  N ++  +L + + +L   IQ L K + +H  L LA  + P   L   
Sbjct  338  LERLISKVAARRVNPREMVQLKRSLERLVP-IQQLLKQQDQHVLLKLAEQINPCEYLAG-  395

Query  447  FSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIMNDLEKKMQSTLISAARDLGLD  506
              +   M++   D   + N   +++   +  L ELR I    +  +   L    R++   
Sbjct  396  --RILNMLKE--DAPMLTNQGRIIRDGCNAELDELRAIAYTGKDYL---LQIQQREIERT  448

Query  507  PGKQIKLDSSAQFGYYFRVT-CKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytk  565
                +K+  +  FGYY  VT   +EKV  +     T+       ++   +L    E+   
Sbjct  449  GISSLKISYNKVFGYYLEVTNTHKEKVPADWIRKQTLT---GAERYITEELKIYEEKILG  505

Query  566  nkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAH--VSNGAPVPYVRPA  623
             + +    +  + +++V  +  Y+ P+     ++AQ+D + SFAH  V+N    P V  +
Sbjct  506  AEDKINVIEQKMFQDLVLEAESYINPILQNARIVAQIDCLCSFAHAAVANNYCKPIVEDS  565

Query  624  ILEKGQGRIILKASRHACVEVQDEI--AFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQ  681
             L      I +KA RH  +E Q  +  ++IPND+Y + + Q   IITGPNM GKS  +RQ
Sbjct  566  AL------INIKAGRHPVIEKQLPLGESYIPNDIYLDDETQQVMIITGPNMAGKSALLRQ  619

Query  682  TGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATK  741
            T +IVLMAQ G FVP   A +  VD +  RVGA D+  KG STFM EM ETASIL + + 
Sbjct  620  TALIVLMAQAGSFVPATHATIGTVDKVFTRVGASDNLSKGESTFMVEMNETASILNNLSG  679

Query  742  DSLIIIDELGRGTSTYDGFGLAWAISEYIAT--KIGAFCMFATHFHELTALANQIPTVNN  799
             SL+++DE+GRGTSTYDG  +AWAI E++          +FATH+HEL  L   +  V N
Sbjct  680  RSLVLMDEIGRGTSTYDGISIAWAIVEHLHNHPNFRPKTLFATHYHELNQLTEDLKRVKN  739

Query  800  LHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEEFQYIGE  859
             +V+       +  +  +K G  + SFGIHVA++A  P  ++  A +    LE+ +++ E
Sbjct  740  FNVSVKEAGNKVIFMRTLKPGGSEHSFGIHVAQMAGMPTSLVLRANEIMGHLEK-EHVRE  798

Query  860  SQGYDIMEPAAKKCYLEREQGEKIIQEFLSKV-KQMPFTEMSEENITIKLKQLK  912
                 + E       +   +      + + K+  Q     MS     +KL +LK
Sbjct  799  GHEDKLKEVPKSTLQMSLFEAADPAWDSIKKILTQTDVNIMSPVEALLKLNELK  852


>gi|46446855|ref|YP_008220.1|  DNA mismatch repair protein [Candidatus Protochlamydia amoebophila 
UWE25]
Length=858

 Score =  261 bits (666),  Expect = 1e-67
 Identities = 226/835 (27%), Positives = 387/835 (46%), Gaps = 69/835 (8%)

Query  34   VRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMGPAGAKNLQSVVLSKMNF---ESFVK  90
            +  F  GDFY A  EDA L ++E+  T               Q + +S + F   E ++ 
Sbjct  43   ILFFRMGDFYEAFYEDAHLLSKELELT-----------LTKRQEIPMSGIPFHTSEGYI-  90

Query  91   DLLLVRQYRVEVYKNRAGNKASKEN-DWYLAYKASPGNLSQFEDILFGNNDMSASIGVVG  149
            D L+ + +RV + +     K +K      +    SPG +     +   NN+  A++  VG
Sbjct  91   DKLVAKGFRVAIAEQIEDPKKTKGLVKREVVRVVSPGTVINSSLLSDKNNNFFAALVKVG  150

Query  150  VKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKECVLPGGETAGD  209
                     +  G+ ++D    +  + EF    +  N    L ++ P E +         
Sbjct  151  ---------QIFGLAFLDLTTGEYWVSEFTQERELLNE---LYRLHPAEFLTSEKFKEKH  198

Query  210  MGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLKGKKGEQMNSAVLPEMENQVAVSS  269
                 ++ Q    L+   +   F  +  +   + L+   K ++++   L  M    A+++
Sbjct  199  ASLFEEMQQTYSFLVNTLEDWQFEHQQAH---DFLINHFKVQRLDGFGLSGMV--AAINA  253

Query  270  LSAVIKFL-ELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLFQGSVEDTTGSQSLAA  328
              A++ +L E L       Q  +  +  SQ+M LD    R L L   S++D +   +L  
Sbjct  254  AGALLNYLQETLCLPIQHIQ-SIRCYSSSQFMMLDRMTQRNLELTH-SLQDGSRRHTLLG  311

Query  329  LLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLN  388
            ++++ +TP G RL++ W+KQPL+  + I +R N ++A +    +   LQ +L  +  D+ 
Sbjct  312  VIDQTQTPMGARLMHHWVKQPLLKVSEIHQRQNGIQALLNHEHIVDQLQ-NLFLQIKDIE  370

Query  389  RLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAV---FVTPLTDLRS  445
            RL  K     A  +D   L+     +  +           + LLL +   ++        
Sbjct  371  RLMMKVSACYATPRDLIALHFSFKPIAFI-----------KSLLLNIPSEWINEHAQKLD  419

Query  446  DFSKFQEMIETTLDMDQV----ENHEFLVKPSFDPNLSELREIMNDLEKKMQSTLISAAR  501
              SK   +I   +  +      E   F  +  F   L ELREI +D +  M         
Sbjct  420  PLSKMNALISNAIVEEPPLRLGEGKTF--RQGFHRELDELREISHDSKAWMARYQTQIRE  477

Query  502  DLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLne  561
            + G+   K +K+  +  FGY+  V+    ++ +   +F       N  ++   +L     
Sbjct  478  ETGI---KTLKVGFNKMFGYFIEVS--RGQIDKMPDHFIRRQTLVNAERYITPELKEYES  532

Query  562  eytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVR  621
            +    +      +  +  ++    + Y + +  +   LA++D ++S  +V+      Y  
Sbjct  533  KVLTAEERINSIESELFHQLRLEVASYTKNVLEVAQALAKIDCLISLTNVAK--KYCYTC  590

Query  622  PAILEKGQGRIILKASRHACVE-VQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIR  680
            P I +     ++++  RH  +E V     FIPND Y +       +ITGPNM GKSTY+R
Sbjct  591  PVIDDSSI--LVIEEGRHPVIETVCRHEKFIPNDTYLDDQANRLLLITGPNMAGKSTYLR  648

Query  681  QTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSAT  740
            Q  +IV++AQIG FVP   A + I+D +  R+GA D   +G STFM EM ETA+IL +AT
Sbjct  649  QVALIVILAQIGSFVPAAKAHIGIIDKVFTRIGASDDLSRGQSTFMVEMTETANILNNAT  708

Query  741  KDSLIIIDELGRGTSTYDGFGLAWAISEYIAT--KIGAFCMFATHFHELTALANQIPTVN  798
              SL+I+DE+GRGTSTYDG  +AW+++EY+ T  K  A  +FATH+ ELT L  ++P   
Sbjct  709  SQSLVILDEIGRGTSTYDGISIAWSVAEYLLTTEKRMAKTLFATHYWELTKLEEKVPGAV  768

Query  799  NLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEE  853
            N +V     ++ +T L ++ KG  D+S+GIHVA LA  P+ V+  +K+    LEE
Sbjct  769  NYNVAVHEADDHITFLRKIIKGGTDKSYGIHVARLAGLPQAVLNRSKEILEHLEE  823


>gi|29377617|ref|NP_816771.1|  DNA mismatch repair protein [Enterococcus faecalis V583]
Length=858

 Score =  261 bits (666),  Expect = 1e-67
 Identities = 227/769 (29%), Positives = 369/769 (47%), Gaps = 62/769 (8%)

Query  160  QVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKECVLPGG--ETAGDMGKLR-QI  216
            Q G  YVD    +L      D +   N EA  +Q   KE VL  G  E+  +   LR  I
Sbjct  139  QFGFAYVDLSTGELKTAVLADEEGVLN-EASALQT--KEMVLGSGIPESLKENLSLRLNI  195

Query  217  IQRGGILITERKKADFSTKDIYQDLNRLLKGKKGEQMNSAVLPEMENQVAVSSLSAVIKF  276
            I      + E  +  F T ++   L   + GK         L    +     SLS + K 
Sbjct  196  IFSTQETVEENAEFSFLTNELINPLEIEITGK---------LLSYLSVTQKRSLSHIQKA  246

Query  277  LELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTP  336
            +E   D                ++K+D  +   L L Q S+       +L  LL++ KT 
Sbjct  247  VEYQPD---------------HFLKMDHYSKFNLELSQ-SIRTGQKKGTLLWLLDETKTA  290

Query  337  QGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQR  396
             G RL+ QW+ +PL+ + +I+ R  +V++ +     R  LQ  L   + DL RLA +   
Sbjct  291  MGGRLLKQWLDRPLIQERQIKARQEMVQSLLNAYFERLDLQAALTNVY-DLERLAGRVAF  349

Query  397  QAANLQDCYRLYQGINQLPNVIQALEK-HEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIE  455
             + N +D  +L   + Q+P + Q +   ++G+   LL  V + P+ DL +       +I 
Sbjct  350  GSVNGRDLIQLRTSLEQVPTIRQLIVGINQGEWDDLL--VDLNPVEDLVA-------LIA  400

Query  456  TTLDMD---QVENHEFLVKPSFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIK  512
            T ++ +   Q+   + ++K  ++  L E R+ M + ++ +        ++ G+   K +K
Sbjct  401  TAINEEAPLQITEGK-VIKDGYNDQLDEYRDAMRNGKQWLAELEAKERQETGI---KNLK  456

Query  513  LDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyee  572
            +  +  FGY+  +T      L   K +       N  +F   +L  L     + + +  E
Sbjct  457  IGYNRVFGYFIEITKSNLANLEEGK-YERKQTLANAERFITPELKELERLILEAEEKSVE  515

Query  573  AQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRI  632
             +  +   +       ++ +QTL   ++ +D + SFA +S      YVRP +    +   
Sbjct  516  LEYQLFLAVREQVKTNIDRLQTLAKTISAVDVLQSFATISER--YQYVRPTLRSNTKNLA  573

Query  633  ILKASRHACVE-VQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQI  691
            I++  RH  VE V     +IPN +    +  +  +ITGPNM GKSTY+RQ  + V+MAQI
Sbjct  574  IVEG-RHPVVEKVLGHQEYIPNSIRMNPETDIL-LITGPNMSGKSTYMRQLALTVVMAQI  631

Query  692  GCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELG  751
            GCFVP ESAE+ I D I  R+GA D  + G STFM EM+E    LR AT +SLI+ DELG
Sbjct  632  GCFVPAESAEMPIFDQIFTRIGASDDLIAGQSTFMVEMMEANQALRHATPNSLILFDELG  691

Query  752  RGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetl  811
            RGT+TYDG  LA AI EYI  ++ A  +F+TH+HELT L   +  + N+HV A+  +  +
Sbjct  692  RGTATYDGMALAQAIIEYIHREVQAKTLFSTHYHELTVLDETLKGLKNIHVGAVEKDGEV  751

Query  812  tMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQ--KALELEEFQY---IGESQGYDIM  866
              L+++ +G  D+S+GIHVA++A  P  ++E A     ALE EE      +   +  ++ 
Sbjct  752  VFLHKMMEGPADKSYGIHVAKIAGLPSPLLERAATILSALEAEETTIPISVHHEEVSEVH  811

Query  867  EPAAKKCYLEREQGEKIIQEFLSKVKQMPFTEMSEENITIKLKQLKAEV  915
            E   +    +    E++    +  +K+M   EM+  +    L QL+  +
Sbjct  812  EETEQLSLFKEVSTEEL--SVIDTLKKMNLLEMTPLDALNMLHQLQKRI  858


>gi|29654365|ref|NP_820057.1|  DNA mismatch repair protein [Coxiella burnetii RSA 493]
Length=859

 Score =  261 bits (666),  Expect = 1e-67
 Identities = 184/561 (32%), Positives = 304/561 (54%), Gaps = 66/561 (11%)

Query  325  SLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRF  384
            SLA LL+   TP G RL+ +WI +PL D+  +++R N V   +E     +  +   LR  
Sbjct  295  SLAWLLDHTATPMGSRLLRRWINRPLRDQILLQQRQNAVSTLLEKRNYSEIYEN--LRHI  352

Query  385  PDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVFVTPLTDLR  444
             DL R+  +   ++A  +D  +L Q +  LP +          HQ+L        L +++
Sbjct  353  GDLERIVARIALRSARPRDLMQLRQALGVLPTL----------HQQLTNLPLNKQLQEIK  402

Query  445  SDFSKFQEMIETTLDMDQVENHEFLVKPS------FDPNLSELR-------EIMNDLEKK  491
            ++   F E+    L    +EN   +++        +D  L ELR       + + DLE++
Sbjct  403  NNLGLFDELFRL-LKKAIIENPPIVIRDGGVIADGYDAPLDELRNMSTNSHQFLIDLEQQ  461

Query  492  -MQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEK----------VLRNNKNFS  540
              + T I+            +K+  +   GYY  ++  + K           L+N + + 
Sbjct  462  ERERTKINT-----------VKVGYNRIHGYYIEISRAQAKQAPTEYIRRQTLKNVERYI  510

Query  541  TVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLA  600
            T +++     F +  L+S +    + K  YE+  D ++++++        P+Q     +A
Sbjct  511  TPELKI----FEDKVLSSRSRALAREKELYEQLLDTLIEKLI--------PLQQCASAIA  558

Query  601  QLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYFEKD  660
             LD + + A  ++   + +  P   +     I ++A RH  VE      F+PND + ++ 
Sbjct  559  NLDVLNTLAERAD--TLNFNAPQFCD--YPIIKIEAGRHPIVENVMTDPFMPNDTHLDEK  614

Query  661  KQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLK  720
            ++M  IITGPNMGGKSTY+RQT +I L+A IG FVP ++A++  +D I  R+GA D    
Sbjct  615  RRML-IITGPNMGGKSTYMRQTALITLLAYIGSFVPAKNAQLGPIDRIFTRIGAADDLAS  673

Query  721  GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMF  780
            G STFM EM ETA+IL +AT++SL+++DE+GRGTST+DG  LA+A + Y+ATK+ AF +F
Sbjct  674  GRSTFMVEMTETAAILHNATEESLVLMDEVGRGTSTFDGLSLAYACASYLATKLKAFALF  733

Query  781  ATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKHV  840
            ATH+ ELTALA+ +  V N+H+ A+  EE +  L+ +++G  ++S+G+ VA+LA  P+ V
Sbjct  734  ATHYFELTALASTLQAVKNVHLDAVEHEEKIIFLHALREGPANKSYGLQVAQLAGIPRSV  793

Query  841  IECAKQKALELEEFQYIGESQ  861
            I+ A+QK  ELE    I E+Q
Sbjct  794  IQHARQKLEELEN-PVISETQ  813


>gi|90412105|ref|ZP_01220112.1|  DNA mismatch repair protein [Photobacterium profundum 3TCK]
Length=845

 Score =  261 bits (666),  Expect = 1e-67
 Identities = 174/570 (30%), Positives = 294/570 (51%), Gaps = 58/570 (10%)

Query  302  LDIAAVRALNLFQ---GSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEE  358
            LD A  R L L Q   G  ++T     LA++L+   TP G RL+ +W+ QP+ D  ++  
Sbjct  257  LDAATRRNLELTQNLSGGFDNT-----LASVLDHTATPMGSRLLKRWLHQPIRDTKQLNH  311

Query  359  RLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVI  418
            RL+ + AF +     +  +  +L    DL R+  +   ++A  +D  R+   +  LP + 
Sbjct  312  RLDAIAAFKDTGMFIEVAE--VLHHMGDLERILARLALRSARPRDLARMRSALQSLPQLA  369

Query  419  QALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVK------P  472
            + L   E           +  L +  +      E++E  +    +EN   +++      P
Sbjct  370  EVLADIEQPR--------IGELANSSAPMDDLCELLERAI----IENPPVIIRDGGVLAP  417

Query  473  SFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEE--  530
             ++  L E R++ +  +K +           G+D    +K+  +   G++ +++  +   
Sbjct  418  GYNAELDEWRDLADGAKKFLDDLETREREQHGID---SLKVGFNQVHGFFIQISRGQSHL  474

Query  531  --------KVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIV  582
                    + L+N + +   +++++  K  NSK  +L              +  + +E+ 
Sbjct  475  APDHYVRRQTLKNAERYIIPELKEHEDKVLNSKSKALGL------------EKKLWEELF  522

Query  583  NISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACV  642
            +    ++E +Q     L++LD + + A  ++   + Y RP + +  Q  I + A RH  V
Sbjct  523  DQLLPHLEQLQNAASALSELDVLANLAERAD--TLNYCRPELTD--QTGIEIAAGRHPVV  578

Query  643  EVQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEV  702
            E      FI N +    D++M  IITGPNMGGKSTY+RQT +I LMA +G FVP E+ ++
Sbjct  579  EQVLSEPFIANPISLHHDRRML-IITGPNMGGKSTYMRQTALIALMAHVGSFVPAEAVKI  637

Query  703  SIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGL  762
              +D I  R+GA D    G STFM EM ETA+IL +AT  SL+++DE+GRGTSTYDG  L
Sbjct  638  GSLDRIFTRIGASDDLASGRSTFMVEMTETANILHNATSKSLVLMDEIGRGTSTYDGLSL  697

Query  763  AWAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVC  822
            AWA +E++A KI A  +FATH+ ELT L + +  + N+H+ A+   + +  ++ V++G  
Sbjct  698  AWASAEWLAEKIAAMTLFATHYFELTELPSMMDGLANVHLDAVEHGDEIAFMHAVQEGAA  757

Query  823  DQSFGIHVAELANFPKHVIECAKQKALELE  852
             +S+G+ VA LA  PK VI+ AK K  +LE
Sbjct  758  SKSYGLAVASLAGVPKAVIKRAKAKLTQLE  787


>gi|62515839|ref|ZP_00387220.1|  COG0249: Mismatch repair ATPase (MutS family) [Lactobacillus 
delbrueckii subsp. bulgaricus ATCC BAA-365]
Length=856

 Score =  260 bits (665),  Expect = 1e-67
 Identities = 207/718 (28%), Positives = 355/718 (49%), Gaps = 57/718 (7%)

Query  191  LIQIGPKECVLPGGETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLKGKKG  250
            L+ +  +E V  G  +A D  +L    Q+  I ++E  +               L+G+  
Sbjct  166  LLSLRTREVVFAGNLSASDRDRL----QKANITVSEPAE---------------LEGEHA  206

Query  251  EQMNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELT-TFDFSQYMKLDIAAVRA  309
            E   S V  ++ + +  +++  ++ +L L +   +    ++  +F+  QY+++     R 
Sbjct  207  EI--SYVQQKLTDSMEKAAVRQLVVYL-LATQKRSLAHLQVAESFEIGQYLQMANTVQRN  263

Query  310  LNLFQGSVEDTTGSQ--SLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFV  367
            L L Q +   TTG +  SL  +L+K  T  G RL+ QW+ +PL+  +RI++R  +V+A +
Sbjct  264  LELTQSA---TTGRKQGSLFWVLDKTTTAMGGRLLKQWLSRPLLSLDRIKQRQQMVQALL  320

Query  368  EDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGK  427
            +D   R+ +  D L+   DL RL+ +      N ++  +L + +     +IQ L +  G 
Sbjct  321  DDYFTRENIV-DSLKGVYDLERLSGRVAFGNVNPRELLQLAKSLEATKLIIQTLVE-SGN  378

Query  428  HQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEF-LVKPSFDPNLSELREIMN  486
                     + P ++L       + +    +D   +   +  +++     +L + RE MN
Sbjct  379  PDLEKYGQGIDPQSELA------ESITNCLVDQPPISAKDGGIIRAGVSEDLDKYREAMN  432

Query  487  DLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQK  546
              +K +    +   +  G+D    +K+  +  FGY+ +V+ K          ++      
Sbjct  433  GGKKWLAQMEMEERQRTGID---NLKIGYNRVFGYFIQVS-KGNVAKVPQDRYTRKQTLT  488

Query  547  NGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVV  606
            N  ++   +L        + ++   + +  +  ++      ++  +Q L   LA LD  V
Sbjct  489  NAERYITPELKEHENLILEAESRSTDLEYELFSQLREAVKAHIPDLQELGRQLAALDVFV  548

Query  607  SFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVE-VQDEIAFIPNDVYFEKDKQMFH  665
            +FA   +     Y RP+   K +  I +K  RH  VE V    ++IPND+  ++D  ++ 
Sbjct  549  AFAQ--DAEEKNYCRPSFSSKNE--IAVKNGRHPVVEAVLPAGSYIPNDLVMDEDTSIY-  603

Query  666  IITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTF  725
            +ITGPNM GKSTY+RQ  +I +MAQIG FVP +SA++ + D I  R+GA D    G STF
Sbjct  604  LITGPNMSGKSTYMRQLALIAIMAQIGSFVPADSAKLPVFDQIFTRIGAADDLYSGKSTF  663

Query  726  MAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFH  785
            M EM E    L+ A+  SL++ DE+GRGT+TYDG  LA AI +Y+  K+GA  +FATH+H
Sbjct  664  MVEMSEANEALQHASSRSLVLFDEIGRGTATYDGMALAGAIIKYLHDKVGAKTLFATHYH  723

Query  786  ELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKHVIECAK  845
            ELT L   +  + N+HV A      L  L+++  G  DQS+GIHVA+LA  P+ V+  A 
Sbjct  724  ELTELDETLLHLKNIHVGATEENGKLIFLHKILPGPADQSYGIHVAKLAGLPRAVLREAS  783

Query  846  Q--KALELEEFQYIGES-QGYDIMEP--AAKKCYLEREQGEKIIQEFLSKVKQMPFTE  898
               K LE E  + I  S Q  D+  P    ++  L+ EQ     +E L ++ Q+   E
Sbjct  784  SMLKRLEAEGAREINPSRQQLDLFSPVEVVEENPLKAEQ-----EELLDEISQVNLNE  836


>gi|69248279|ref|ZP_00604703.1|  MutS 1 protein [Enterococcus faecium DO]
Length=881

 Score =  260 bits (664),  Expect = 2e-67
 Identities = 195/636 (30%), Positives = 324/636 (50%), Gaps = 52/636 (8%)

Query  299  YMKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEE  358
            ++K+D  +   L L Q S+       +L  LL++ KT  G RL+ QW+ +PL+   +I+ 
Sbjct  254  FLKMDYYSKFNLELSQ-SIRTGKKHGTLLWLLDETKTAMGGRLLKQWLDRPLIQAKQIKA  312

Query  359  RLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVI  418
            R  +V + ++    R  LQ  L + + DL RLA +      N +D  +L   + Q+P + 
Sbjct  313  RQEMVASLLDSYFERIDLQSALTKVY-DLERLAGRVAFGNVNGRDLIQLKTSLEQVPMIR  371

Query  419  QALEK-HEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPN  477
              +E   +G+ Q LL  +   P+  L        + I+    +   E +  ++K  F+  
Sbjct  372  GLIEGIDQGQWQSLLSEM--QPMDHL---VQLIDQAIQDDPPLQITEGN--IIKDGFNEQ  424

Query  478  LSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNK  537
            L   R  M + +K +        ++ G+   K +K+  +  FGYY  +T           
Sbjct  425  LDMYRSAMRNGKKWLAELEAKERQETGI---KNLKIGFNRVFGYYIEIT---------KA  472

Query  538  NFSTVDIQK--------NGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYV  589
            N    +++K        N  +F   +L  L  +  + + +  + +  +   +       +
Sbjct  473  NLGNAELEKYERKQTLANAERFITPELKELETQILEAEEKSVDLEYQLFLAVREEVKKAI  532

Query  590  EPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVE-VQDEI  648
            +P+Q L   ++ +D + SFA +S      YVRP ++   + ++++K  RH  VE V    
Sbjct  533  QPLQVLAKAISAVDVLQSFATISER--YQYVRPELVSD-KHQLLIKDGRHPVVEKVLGHQ  589

Query  649  AFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCI  708
             +IPN V   +D +M  +ITGPNM GKSTY+RQ  + VLMAQ+GCFVP + A + I D I
Sbjct  590  EYIPNSVEMAED-EMILLITGPNMSGKSTYMRQLALTVLMAQMGCFVPAKQAVLPIFDRI  648

Query  709  LARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISE  768
              R+GA D  + G STFM EM+E    LR AT +SLI+ DELGRGT+TYDG  LA AI E
Sbjct  649  FTRIGASDDLIAGQSTFMVEMMEANQALRYATPNSLILFDELGRGTATYDGMALAQAIIE  708

Query  769  YIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGI  828
            YI   + A  +F+TH+HELT L  ++P + N+HV A+  +  +  L+++  G  D+S+GI
Sbjct  709  YIHRHVQAKTLFSTHYHELTVLEKELPQLKNVHVGAVEKDGEVVFLHKMMDGPADKSYGI  768

Query  829  HVAELANFPKHVIECAKQKALELEEFQYIGESQGYDIMEPAAKKCYLEREQ-----GEKI  883
            HVA++A  P +++E A      LE     G++  + +     +K    +++      EK+
Sbjct  769  HVAKIAGLPSNLLERAADILHTLEN----GDNGHHTVPAEVEEKTKTAKQEQIKPPAEKV  824

Query  884  IQEFL-SKVKQ-----MPFTEMSEENITI--KLKQL  911
             Q+ +  +VK+       F+E+SE    +   LKQ+
Sbjct  825  NQDHIQDRVKEENQQLSLFSELSENETEVIESLKQI  860


>gi|34763050|ref|ZP_00144024.1|  DNA mismatch repair protein mutS [Fusobacterium nucleatum subsp. 
vincentii ATCC 49256]
Length=896

 Score =  260 bits (664),  Expect = 2e-67
 Identities = 241/917 (26%), Positives = 428/917 (46%), Gaps = 54/917 (5%)

Query  11   LESAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMGPA  70
            ++ +A+   ++ ++ + +     + +F  GDFY    EDA +A++E+  T      +   
Sbjct  18   IKMSADTPLMQQYKKIKKDYQNEILMFRLGDFYEMFFEDAKIASKELGLT------LTKR  71

Query  71   GAKNLQSVVLSKMNFESFVKDL--LLVRQYRVEVYKNRAGNK-ASKENDWYLAYKASPGN  127
              +  Q V L+ + + S    +  L+ + Y + +       K A+      +    +PG 
Sbjct  72   NKEKGQDVPLAGVPYHSVASYIAKLVEKGYSIAICDQVEDPKSATGIVKREVTRVITPGT  131

Query  128  LSQFEDILFGNNDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNL  187
            +   + +   NN+  A I +  ++  A        + Y D    +  + E    + F   
Sbjct  132  IIDVDFLDKNNNNYIACIKINTIESVAA-------IAYADITTGEFSVFEIKGKNFFEKA  184

Query  188  EALLIQIGPKECVLPGGETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLKG  247
             A + +I   E +L     +  +   ++ +   G+  TE      +   I    N +   
Sbjct  185  LAEMNKIQASEILLDEKTYSEYIEIFKEKMSFSGVKFTEVSNVKKAENFITSYFNII---  241

Query  248  KKGEQMNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAV  307
                  +  V       +A+S+ + ++ +++ L   +     ++   +    M+L+I+  
Sbjct  242  ------SIEVFSLKSKDLAISTSANLLHYIDELQKGNELPFSKIEYRNIDNIMELNISTQ  295

Query  308  RALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFV  367
              LNL     E+  G+  L  +L+ C T  G R + + IK P +D  +I++R   V+ F 
Sbjct  296  NNLNLVPKRNEEARGT--LLGVLDNCVTSVGSRELKKIIKNPFLDIEKIKQRQFYVDYFY  353

Query  368  EDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGK  427
             D  LR+ ++E L +   D+ R+A K      N +D   L   I +     + L++H+  
Sbjct  354  NDVLLRENVREHL-KDIYDVERIAGKIIYGTENGKDLLSLKDSIRKSLETYRLLKEHQ--  410

Query  428  HQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIMND  487
              K LL + V  L ++   ++K + +I         E    ++K  ++  L ELR+I + 
Sbjct  411  EIKNLLDIDVKILLEI---YNKIELIISVEAPFSVREGG--IIKDGYNTELDELRKI-SK  464

Query  488  LEKKMQSTLISAARD-LGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQK  546
            L K     +    R+  G+   K +K+  +  FGY+  VT   E ++   K++       
Sbjct  465  LGKDFILEIEQRERERTGI---KGLKIKYNKVFGYFIEVTKANEHLVP--KDYIRKQTLV  519

Query  547  NGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVV  606
            N  ++    L    E+    K++ E  +  + K++ +    +++ +  L + +A LD V 
Sbjct  520  NSERYIVPDLKEYEEKVITAKSKIEALEYELFKQLTSEIKEHIDSLYKLANRIANLDIVS  579

Query  607  SFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIA-FIPNDVYFEKDKQMFH  665
            +F+H++      YV+P I E  +  + +K  RH  VE       ++ ND+  + DK    
Sbjct  580  NFSHIATKNS--YVKPEISE--EDILEIKGGRHPIVETLIASGTYVKNDIVLD-DKNNLI  634

Query  666  IITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTF  725
            I+TGPNM GKSTY++Q  + ++MA IG +V  + A++ IVD I  RVGA D  L G STF
Sbjct  635  ILTGPNMSGKSTYMKQVALNIIMAHIGSYVAADYAKIPIVDKIFTRVGASDDLLTGQSTF  694

Query  726  MAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFH  785
            M EM E ASIL SAT  S I++DE+GRGTSTYDG  +A AI+EYI   IGA  +FATH+H
Sbjct  695  MLEMTEVASILNSATNKSFIVLDEIGRGTSTYDGISIATAITEYIHNVIGAKTIFATHYH  754

Query  786  ELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKHVIECAK  845
            ELT L  ++    N  V      + +  L ++ KG  D+S+GI VA L+  PK V+  ++
Sbjct  755  ELTELEKELERAINFRVEVKEDGKNVVFLREIVKGGADKSYGIEVARLSGVPKEVLNRSR  814

Query  846  QKALELEEFQYIGESQGYDIMEPAAKKCYLE--REQGEKIIQEFLSKV----KQMPFTEM  899
            +   +LE  + + E++            + E   E+  +I+ E  +KV    K M    +
Sbjct  815  KILKKLETRKNLIENKIKAEQMMLFGSGFEEDFEEEETEILSENENKVLELLKNMDLNSL  874

Query  900  SEENITIKLKQLKAEVI  916
            S     +KL +LK  +I
Sbjct  875  SPLESLLKLNELKKILI  891


>gi|39996921|ref|NP_952872.1|  DNA mismatch repair protein [Geobacter sulfurreducens PCA]
Length=871

 Score =  260 bits (664),  Expect = 2e-67
 Identities = 223/779 (28%), Positives = 367/779 (47%), Gaps = 56/779 (7%)

Query  152  MSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKECVLPGGETAGDMG  211
            +S   G  + GV Y+D      G     + D      A +  + P+E ++P     G  G
Sbjct  129  LSLFPGPDRWGVAYLDL---STGDFRVTETDSADAAWAEVACVNPREILMPLSFRDGGAG  185

Query  212  KLRQIIQRGGILITERKKADFSTKDIY--QDLNRLLKGKKG-EQMNSAVLPEMENQVAVS  268
              R  +  G +L        +  + +Y  +   R+++   G     +A    M+    + 
Sbjct  186  SERPDLAAGRML-------SYVDEWVYDAEYAERMVRNHFGVASAEAAGCGSMD--CGLR  236

Query  269  SLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLFQGSVEDTTGSQSLAA  328
            +++AV+ +L+            L  +   +++ LD ++ R L L   ++ D     SL  
Sbjct  237  AVAAVLHYLQQTQKGDVRHISYLQAYRTQEFLVLDESSRRNLEL-NATIGDGKRRGSLLG  295

Query  329  LLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLN  388
            LL++  T  G R + QWI  PL+   +I ERL+ VE  V DAE RQ ++  L   + DL 
Sbjct  296  LLDRTVTAMGGRKLKQWINYPLVSIEKINERLDAVEELVADAEFRQGVRAALDGVY-DLE  354

Query  389  RLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVFVTPLTDLRSDFS  448
            RL  +    +A+ +D   L   + +LP++I            LL     T L  LR    
Sbjct  355  RLNGRISLASASAKDLVALRASLVRLPSLIA-----------LLTPAASTLLARLRDGID  403

Query  449  KFQEMIETTLDMDQVENHEFLVKPS------FDPNLSELREIMNDLEKKMQSTLISAARD  502
               + +E  +    V +  F+++        +   L ELR I  + +  +          
Sbjct  404  LLAD-VEELIGRGIVPDPPFVLREGGIIAQGYHSELDELRSISREGKGFIARLEAQEKAR  462

Query  503  LGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLnee  562
             G+     +K+  +  FGYY  VT      + ++  +       N  +F   +L    E+
Sbjct  463  TGIS---SLKVRYNKVFGYYIEVTKSNLSAIPDD--YIRRQTLANAERFITPELKEYEEK  517

Query  563  ytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRP  622
                +    E + A+ ++I    +   E +    D LA LD + + A V++     YVRP
Sbjct  518  VLGAEDRIVELEYALFQDIRQRVAAQGERIARTADRLATLDVLAALADVAHDHR--YVRP  575

Query  623  AILEKGQGRIILKASRHACVEVQDEIA-FIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQ  681
             + ++G   I++   RH  VE  +    F+ NDV  +  +    IITGPNM GKST++RQ
Sbjct  576  TV-DEGDA-IVVTGGRHPVVEALNRSERFVANDVQLDNGENQLVIITGPNMAGKSTFMRQ  633

Query  682  TGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATK  741
              +IVLMAQ G FVP + A + +VD I  RVGA D+  +G STFM EM+ETA+ILR+AT 
Sbjct  634  VALIVLMAQTGSFVPADEASIGVVDRIFTRVGASDNLARGQSTFMVEMMETAAILRNATP  693

Query  742  DSLIIIDELGRGTSTYDGFGLAWAISEYI--ATKIGAFCMFATHFHELTALANQIPTVNN  799
             SL+++DE+GRGTST+DG  +AWA++EY+    +  A  +FATH+HELT LA     V N
Sbjct  694  RSLVVLDEIGRGTSTFDGVSIAWAVAEYLHDTERCAAKTLFATHYHELTELAVTRNRVKN  753

Query  800  LHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEEFQY---  856
             +V      + +  L ++ +G    S+GI VA LA  P+ VIE AK+    LE+ +Y   
Sbjct  754  CNVAVKEWNDQVIFLRKIVEGGASHSYGIQVARLAGLPQEVIERAKEILHNLEKGEYAEG  813

Query  857  ----IGESQGYDIMEPAAKKCYLEREQGEKIIQEFLSKVKQMPFTEMSEENITIKLKQL  911
                I   +     +P+ +      +QG+ +++  ++ +     T +   NI  +LK++
Sbjct  814  GIPRIARGKRAGAPKPSPQLSLF--DQGDDLLRRRIAGLNIAALTPLEALNILDELKRM  870


>gi|83589961|ref|YP_429970.1|  DNA mismatch repair protein MutS [Moorella thermoacetica ATCC 
39073]
Length=863

 Score =  260 bits (664),  Expect = 2e-67
 Identities = 253/887 (28%), Positives = 395/887 (44%), Gaps = 78/887 (8%)

Query  34   VRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMGPAGAKNLQSVVLSKMNFESFVKDLL  93
            +  F  GDFY    EDA +AARE+         +   G K    +     +        L
Sbjct  25   ILFFRLGDFYEMFYEDAEVAARELDLV------LTTRGGKEAAPMCGVPFHAADSYLARL  78

Query  94   LVRQYRVEVYKNRAGNKASKENDWYLAYKA-SPGNLSQFEDILFGNNDMSASIGVVGVKM  152
            + + Y+V + +     + +K        +  +PG ++  + +  G N+  A+I       
Sbjct  79   VGKGYKVAICEQMEDPRQAKGLVRREVIRVVTPGTITDEKALTPGGNNYLAAI-------  131

Query  153  SAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKECVLPGGETAGD--M  210
              V      G+ + D+   +      PD +    L   L+++ P E +LPG E A D  +
Sbjct  132  --VRYNGCWGLAWADASTGEFLFTTCPDQE---TLVDELVRLMPSEYLLPG-ELARDTAL  185

Query  211  GKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLKGKKGEQMNSAVLPEMENQVAVSSL  270
             +L QI  RG I   +      + +   +D                 L  +E   A    
Sbjct  186  KRLLQIYTRGVITGWQVASNPEAARQSLED-----------HFGHEALAGVELPAAAGLA  234

Query  271  SAVIKFLELLSDDSNFGQFEL-TTFDFSQYMKLDIAAVRALNLFQGSVEDTTGSQSLAAL  329
            +A+I    + +  ++    E       +  M LD A  R L L     E      SL  +
Sbjct  235  AAMILSFLVATQHNSLAHLEAPAAAATTSRMFLDQATRRNLELVTAGREQKREG-SLLWV  293

Query  330  LNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNR  389
            L+K  T  G R + +W+ QPL+D   I+ER   V   VE   LRQ L+E L +   DL R
Sbjct  294  LDKTLTAMGARTLRRWLDQPLVDAGAIKERQEAVAELVEGFILRQELRERL-QVVRDLER  352

Query  390  LAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVF--VTPLTDLRSDF  447
            LA +     A  ++   L   +  +P +++ + +    H +LL  V   + PL DL    
Sbjct  353  LAGRVAYGTAGGRELQALRGSLAVIPGILELMSE---VHSRLLAQVRAQLDPLDDLVDLL  409

Query  448  SKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIMNDLEKKMQSTLISAARDLGLDP  507
             +   +++   D         +++  ++  + +LRE        + S         G+  
Sbjct  410  GR--ALVD---DPPASITEGGIIRTGYNGEVDKLREAATHGRDWIASLEAEERERTGI--  462

Query  508  GKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknk  567
             K +K+  +  FGYY  VT     + +   ++       N  +F   +L  L  +    +
Sbjct  463  -KSLKVGYNRVFGYYIEVT--RPNLPQVPADYERKQTLANAERFVTRRLQELERQVLGAE  519

Query  568  teyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEK  627
                + +  + + +     G +  +Q     L  LDA++S A V+      Y  P +   
Sbjct  520  ERLVQLEYELFQGLREEVLGVLPRIQATARALGVLDALISLATVA--VDNNYTCPRV---  574

Query  628  GQGRII-LKASRHACVE-VQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVI  685
              G +I ++  RH  VE V     F+PND Y +++ Q   IITGPNM GKSTYIRQ  +I
Sbjct  575  DDGTVIEIEQGRHPVVELVGSPGTFVPNDTYLDQE-QYIQIITGPNMAGKSTYIRQVALI  633

Query  686  VLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLI  745
            VL+AQIG FVP   A + +VD I  RVGA D    G STFM EM E A IL+ AT+ SL+
Sbjct  634  VLLAQIGSFVPARRAHIGLVDRIFTRVGAADDIFAGQSTFMVEMQEVAGILKHATRRSLV  693

Query  746  IIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVtal  805
            I+DE+GRGTST DG  +A A++EYI   IGA C+FATH+HEL +LA ++  V N  V  L
Sbjct  694  ILDEVGRGTSTADGLSIARAVTEYIHNVIGARCLFATHYHELVSLAEELSGVRNYCVAVL  753

Query  806  tteetltMLYQVKKGVCDQSFGIHVAELANFPKHVIECA-------------------KQ  846
               E +T L  +  G  D+S+GIHVA LA  P+ V+E A                   K+
Sbjct  754  EEGEDITFLRTIVPGSTDKSYGIHVARLAGLPEQVLERAREILEQQPRAQVRVLTKPVKK  813

Query  847  KALELEEFQYIGESQGYDIMEPAAKKCYLEREQGEKIIQEFLSKVKQ  893
              L   E Q + E  GY++M     +   +  + +K++ + L  VK+
Sbjct  814  PTLTPGEVQVLEELAGYNLMAATPLEAMEQIFRWQKMLHKELDIVKR  860


>gi|51473494|ref|YP_067251.1|  DNA mismatch repair protein [Rickettsia typhi str. Wilmington]
Length=891

 Score =  259 bits (663),  Expect = 2e-67
 Identities = 223/862 (25%), Positives = 409/862 (47%), Gaps = 56/862 (6%)

Query  36   LFDRGDFYTAHGEDALLAAREVFKTQGVIKYMGPAGAKNLQSVVLSKMNFESFVKDL--L  93
            LF  GDFY    EDA+LA+  +    G+   +   G    + + +  + + +    L  L
Sbjct  40   LFRMGDFYELFYEDAILASNIL----GIA--LTKRGKNCEEEIPMCGVPYHALEHYLTKL  93

Query  94   LVRQYRVEVYKNRAGNKASKENDWYLAYKASPGNLSQFEDILFGNNDMSASIGVVGVKMS  153
            +   Y+V +       + +K+   Y A              +   N +SA+       + 
Sbjct  94   ITENYKVAICDQLETPEEAKKRGGYKAVVTRDVTRIITPGTIIEENLISAAEPNYLTSLV  153

Query  154  AVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKECVLPGGETAGDMGKL  213
                ++   + YVD    K+ +   P+ +  + L  L      +E +L     + ++   
Sbjct  154  MTKNKKTASICYVDLSTSKIFIVNVPETEILNELARLK----SREILLSENLKSSNLAD-  208

Query  214  RQIIQRGGILITERKKADFST---KDIYQDLNRLLKGKKGEQMNSAVLPEMENQVAVSSL  270
              I+++    IT +  + F+    + I  D  ++   K   +++S+          + ++
Sbjct  209  -SILKQFNCRITYQVDSFFAINKCEKIILDFYKIRDIKGIGEISSS---------QICAI  258

Query  271  SAVIKFLELLSDDSNFGQFELTTF-DFSQYMKLDIAAVRALNLFQGSVEDTTGSQSLAAL  329
             +++++L L +   N     +    +F  YM +D +  R L +      +  GS  +   
Sbjct  259  GSILEYLSL-TQKQNIPNLPIPKIINFHSYMTIDFSTRRNLEIVTNIQGNLHGS--VLNT  315

Query  330  LNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNR  389
            LN   T QG RL+  ++  PL +  +I  RLN+ E F  +  +   ++E LL+   D+ R
Sbjct  316  LNHTVTKQGGRLLYHFLSSPLTNIAKINRRLNITEFFYSNLGIVTRIRE-LLKNTSDIER  374

Query  390  LAKKFQRQAANLQDCYRLYQGINQLPNVIQAL--EKHEGKHQKLLLAVFVTPLTDLRSDF  447
               +     ++ +D   +   + +   +I  L  E H      L L  F+  +    S  
Sbjct  375  CLTRITMNRSSGRDLLSIKYTL-ETAKIINGLFSESHS-----LNLPNFIGKIIKPLSGD  428

Query  448  SKFQEMIETTLDMDQVENHEF--LVKPSFDPNLSELREIMNDLEKKMQSTLISAARDLGL  505
            ++   +I+ ++  D   N     ++K  F P +++L +++N+ +  ++       ++ G+
Sbjct  429  AELYNLIDMSIREDAPNNLNDGGIIKHEFHPKVAQLNDLINNGKLHVEKLKDQYRKETGI  488

Query  506  DPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytk  565
            D    +K+  +   G +  +T K    + + K F       N V++T  +L +L  E   
Sbjct  489  D---SLKISHNNVLGLFIDITAKNVNKILDPK-FIHRQTTVNSVRYTTYELQNLENELVN  544

Query  566  nkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAIL  625
             +T     +  +  +I          ++ L + L+ LD   +FA++++     Y +P   
Sbjct  545  AQTLVISLEKELYTDICRKVIEKSSYLRILANSLSGLDVFCNFAYIAD--EYNYTKPEFT  602

Query  626  EKGQGRIILKASRHACVE---VQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQT  682
                  I+    RH  VE   ++   +F+ ND +  + +++  +ITGPNM GKSTY+RQ 
Sbjct  603  NDLSFDIV--KGRHPVVEAALLKTSKSFVYNDCHLSEAERIC-LITGPNMAGKSTYLRQN  659

Query  683  GVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKD  742
             +I ++AQIG FVP +SA++ +VD I +R+GA D  +KG STFMAEMLET++IL  +TK+
Sbjct  660  AIITIIAQIGSFVPAKSAKIGVVDKIFSRIGAADDLIKGQSTFMAEMLETSAILAQSTKN  719

Query  743  SLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHV  802
            SLII+DE+GRGTSTYDG  +AW++ EYI  K+   C+FATH+HELT + N +P + N  +
Sbjct  720  SLIILDEVGRGTSTYDGVSIAWSVLEYIHDKLKCRCLFATHYHELTVMKNFLPALQNYTI  779

Query  803  taltteetltMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEEFQYIGESQG  862
                + + +  L+ +  G  ++S+G+HVA LA  P  VI  A Q  L   +F+ I  S+G
Sbjct  780  AIEESGKDILFLHNIILGTSNKSYGLHVAALAGLPTSVINRAAQILL---KFEKISISKG  836

Query  863  YDIMEPAAKKCYLEREQGEKII  884
             +I+  A+    L   + +K I
Sbjct  837  KNIVSTASNNLSLFNFEPQKHI  858


>gi|62464749|ref|ZP_00384035.1|  COG0249: Mismatch repair ATPase (MutS family) [Lactococcus lactis 
subsp. cremoris SK11]
Length=840

 Score =  259 bits (663),  Expect = 2e-67
 Identities = 188/604 (31%), Positives = 315/604 (52%), Gaps = 38/604 (6%)

Query  258  LPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLFQGSV  317
            L  +ENQ A S L A +K  ++  D S+  + E   ++   +++LD A   +L L     
Sbjct  210  LTALENQAA-SKLLAYVKETQM-RDLSHLQEVE--HYEIKDFLQLDFATKSSLELTANKR  265

Query  318  EDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQ  377
            E+     +L  LL++ KT  G R++  WI +PL+  + I++R+ +V+ F++    R  L 
Sbjct  266  ENKKHG-TLYWLLDETKTAMGTRMLRSWIDRPLVSNSAIQKRMEIVQVFLDHFFERSDLI  324

Query  378  EDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLP---NVIQALEKHEGKHQKLLLA  434
            E  L+   DL RLA +     A   D  +L   ++ +P   N+++ L++           
Sbjct  325  E-ALKGVYDLERLASRVSFGKAVPVDFLQLANSLSNVPAIKNILEVLDE-----------  372

Query  435  VFVTPLTDLRSDFSKFQEM---IETTL--DMDQVENHEFLVKPSFDPNLSELREIMNDLE  489
               T L +LRS   +  E+   I + +  +  +      ++K  ++  L + RE + +  
Sbjct  373  ---TSLNELRSQLDEIPELSGLINSAISENASRTITEGGIIKKGYNVQLDKYREALENGT  429

Query  490  KKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGV  549
              +           G+     +++D + + GYYF +T  + ++    ++F      KN  
Sbjct  430  SWIAKLEADEKAKTGIST---LRIDYNRKDGYYFHIT--QSQLNSVPEHFYRKATLKNSE  484

Query  550  KFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFA  609
            +F + +LT + E   + + +    +  +   +   +  Y+  +Q L   +A++D + S +
Sbjct  485  RFGSQELTEIEEIMLEAREKSSSLEYDLFMGLRAETEQYIGRLQALAKTIAEIDCLQSLS  544

Query  610  HVSNGAPVPYVRPAILEKGQGRIILKASRHACVE-VQDEIAFIPNDVYFEKDKQMFHIIT  668
             V+      Y+RP + E G   + +K  RHA VE V     ++PND+   +   +  +IT
Sbjct  545  VVAEKQG--YIRPTLTE-GSRIVEIKGGRHAVVEAVMGAQEYVPNDIELPEQTDI-QLIT  600

Query  669  GPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAE  728
            GPNM GKSTY+RQ  + V+MAQIG FVP ++A + I D I  R+GA D+ + G STFM E
Sbjct  601  GPNMSGKSTYMRQFALTVIMAQIGSFVPAKTANLPIFDAIFTRIGASDNLISGESTFMVE  660

Query  729  MLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELT  788
            M E    ++ AT  SLII DELGRGT+TYDG  LA AI EY+   IGA  +FATH+HELT
Sbjct  661  MSEANHAIQKATSRSLIIFDELGRGTATYDGMALAQAIIEYVHEYIGAKTLFATHYHELT  720

Query  789  ALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKA  848
             L  ++  ++N+HV  L     +T L+++  G  D+S+GIHVA++A  P+ ++E A    
Sbjct  721  DLDKELDHLDNVHVATLEQNGNVTFLHKITDGPADKSYGIHVAKIAGLPQTLLERADLIL  780

Query  849  LELE  852
             +LE
Sbjct  781  QKLE  784


>gi|78189282|ref|YP_379620.1|  DNA mismatch repair protein [Chlorobium chlorochromatii CaD3]
Length=873

 Score =  259 bits (662),  Expect = 3e-67
 Identities = 186/596 (31%), Positives = 306/596 (51%), Gaps = 26/596 (4%)

Query  263  NQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLFQGSVEDTTG  322
            N+ A+ +   ++++LE    +S      +     +++M LD    R L +   S++D + 
Sbjct  238  NRAALVAAGVILQYLEETRQNSLSYITRIGELHHTEFMSLDQQTKRNLEIIS-SMQDGSL  296

Query  323  SQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLLR  382
            S SL  ++++ + P G RL+ +W+++PL     I+ER N VE  VE+  LR+++ E L  
Sbjct  297  SGSLLQVMDRTRNPMGARLLRRWLQRPLKKLTNIQERHNAVEELVENRTLRESVAEQLAA  356

Query  383  RFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVFVTPLTD  442
               DL R   +        ++  +L   +  +P  +QAL       +   L   + PL  
Sbjct  357  -INDLERSLARIATLRTIPREVRQLGISLAAIPT-LQALLSDVTAPRLQALTAALQPLP-  413

Query  443  LRSDFSKFQEMIETTLDMDQ--VENHEFLVKPSFDPNLSELREIMNDLEKKMQSTLISAA  500
                  K  E IE+ +D D          ++  ++  L +LR I +  + ++        
Sbjct  414  ------KLAEQIESAIDPDAGATMRDGGYIRAGYNEELDDLRSIASTAKDRLMQIQQEER  467

Query  501  RDLGLDPGKQIKLDSSAQFGYYFRVT-CKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSL  559
                +     +K+  +  FGYY  ++    +KV    +   T+    N  ++T   L   
Sbjct  468  EATAIS---SLKVSYNKVFGYYIEISRANSDKVPAYYEKKQTL---VNAERYTIPALKEY  521

Query  560  neeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPY  619
             E+    + +    +  + + +    +     +Q    +LA+LDA+ SFA  +      Y
Sbjct  522  EEKILHAEEKSLLLEAELFRNLCQQIATEAATVQANAALLAELDALCSFAECA--VAFDY  579

Query  620  VRPAILEKGQGRIILKASRHACVE--VQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKST  677
             +P + E     + + A RH  +E  +  E ++IPND +F+ DKQ   IITGPNM GKS+
Sbjct  580  TKPTMHEGTT--LSITAGRHPVLERLLGAEESYIPNDCHFD-DKQTMLIITGPNMAGKSS  636

Query  678  YIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILR  737
            Y+RQ G+IVL+AQ G FVP ESA + +VD I  RVGA D+   G STF+ EM E A+IL 
Sbjct  637  YLRQIGLIVLLAQAGSFVPAESASLGVVDRIFTRVGASDNLTSGESTFLVEMNEAANILN  696

Query  738  SATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPTV  797
            +AT+ SL+++DE+GRGTST+DG  +AW++ EYI   IGA  +FATH+HEL  L  ++  V
Sbjct  697  NATERSLLLLDEIGRGTSTFDGMSIAWSMCEYIVHTIGAKTLFATHYHELAELEERLKGV  756

Query  798  NNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEE  853
             N + T + T E +  L ++ +G  D S+GI VA++A  P  VI  A++    LE+
Sbjct  757  VNYNATVVETAERVIFLRKIVRGATDNSYGIEVAKMAGMPNDVISRAREILAGLEK  812


>gi|19746989|ref|NP_608125.1|  DNA mismatch repair protein [Streptococcus pyogenes MGAS8232]
Length=851

 Score =  259 bits (662),  Expect = 3e-67
 Identities = 178/569 (31%), Positives = 300/569 (52%), Gaps = 31/569 (5%)

Query  291  LTTFDFSQYMKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPL  350
            L  ++   Y+++  A   +L+L + +  +     SL  LL++ KT  G RL+  WI +PL
Sbjct  241  LVHYEIKDYLQMSYATKSSLDLVENARTNKKHG-SLYWLLDETKTAMGMRLLRSWIDRPL  299

Query  351  MDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQG  410
            + K  I ER  +++ F+ +A + +T   + L+   D+ RL+ +     AN +D  +L   
Sbjct  300  VSKEAILERQEIIQVFL-NAFIERTDLSNSLKGVYDIERLSSRVSFGKANPKDLLQLGHT  358

Query  411  INQLPNVIQALEKHEGKHQKLLLAVFVTPLTD-LRSDFSKFQEM---IETTLDMDQVE--  464
            + Q+P +            K +L  F +P  D L +D     E+   I T +D D     
Sbjct  359  LAQVPYI------------KAILESFNSPCVDKLVNDIDSLPELEYLIRTAIDTDAPATI  406

Query  465  NHEFLVKPSFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFR  524
            +   +++  FD  L   R++M +    +        +  G++    +K+D + + GYYF 
Sbjct  407  SEGSIIRTGFDERLDHYRKVMREGTGWIADIEAKERQASGIN---NLKIDYNKKDGYYFH  463

Query  525  VTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNI  584
            VT     ++   ++F      KN  ++  ++L  +  +  + + E    +  I   I   
Sbjct  464  VTTSNLSLVP--EHFFRKATLKNSERYGTAELAKIEGQMLEAREESSSLEYDIFMCIRAQ  521

Query  585  SSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVE-  643
               Y+  +Q L   LA +D + S A V+      Y+RP   +     I ++  RHA VE 
Sbjct  522  VETYINRLQKLAKTLATVDVLQSLAVVAETNH--YIRPQFNDNHM--ITIQEGRHAVVEK  577

Query  644  VQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVS  703
            V     +IPN + F++   +  +ITGPNM GKSTY+RQ  + V+MAQ+G FV  +  ++ 
Sbjct  578  VMGVQEYIPNSISFDQQTSI-QLITGPNMSGKSTYMRQLALTVIMAQMGSFVAADHVDLP  636

Query  704  IVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLA  763
            + D I  R+GA D  + G STFM EM+E    ++ A+ +SLI+ DELGRGT+TYDG  LA
Sbjct  637  LFDAIFTRIGAADDLISGQSTFMVEMMEANQAIKRASDNSLILFDELGRGTATYDGMALA  696

Query  764  WAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCD  823
             AI EYI  ++GA  +FATH+HELT L+ ++ ++ N+HV  L  +  +T L+++ +G  D
Sbjct  697  QAIIEYIHDRVGAKTIFATHYHELTDLSTKLTSLVNVHVATLEKDGDVTFLHKIAEGPAD  756

Query  824  QSFGIHVAELANFPKHVIECAKQKALELE  852
            +S+GIHVA++A  PK +++ A +  + LE
Sbjct  757  KSYGIHVAKIAGLPKSLLKRADEVLIRLE  785


>gi|88948438|ref|ZP_01151201.1|  MutS 1 protein [Halorhodospira halophila SL1]
Length=868

 Score =  259 bits (662),  Expect = 3e-67
 Identities = 237/856 (27%), Positives = 387/856 (45%), Gaps = 59/856 (6%)

Query  2    AVQPKETLQLESAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQ  61
            A Q  ET     A     +R F  +  +   T+  +  GDFY    EDA  AA+ +  T 
Sbjct  3    ATQEAETAT-NGAGHTPMMRQFLRIKAEYPETLLFYRMGDFYELFYEDAERAAKLLDIT-  60

Query  62   GVIKYMGPAGAKNLQSVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLAY  121
              +   G +    +    +   + ES++  L+ + +      +    N      +  +  
Sbjct  61   --LTTRGESAGAPIPMAGVPVQSVESYLARLVRLGESVAICEQIGDPNTTKGPVERQVVR  118

Query  122  KASPGNLSQFEDILFGNNDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDN  181
              +PG L+  ED L      +    V      A   + + GV  ++    +  + E PD 
Sbjct  119  VVTPGTLT--EDALLEERSANLLTAV------APGPKGRFGVASLELSSGRFSVLEAPDQ  170

Query  182  DQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDL  241
            +    L A L ++ P E +LP  +              GG +   R    F     Y   
Sbjct  171  EA---LTAELERLRPAELILPDDDQTP--------APEGGCVAQRRPSWHFE----YDSA  215

Query  242  NRLLKGKKGEQMNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMK  301
             RLL  + G    S    E E    V++  A++++L      +      LT     + + 
Sbjct  216  RRLLLRQLGTHDLSGFGAE-ELHAPVTAAGALLQYLNETQRAALPHVGALTVESRDEAIT  274

Query  302  LDIAAVRALNL---FQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEE  358
            +D A+ R L +     G  E T     LA++++   T  G RL+ +W+++PL  +  I  
Sbjct  275  IDAASRRNLEIEHNLSGGTEHT-----LASVIDTSVTAMGGRLLRRWLQRPLRRRETIAA  329

Query  359  RLNLVEAFVEDA--ELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPN  416
            R   V A  + A  ++R TL+        D+ R+  +     A  +D   L   + +LP 
Sbjct  330  RHAAVAALADGAFADVRSTLEG-----CADVERILARVALGTARPRDLTGLRDALERLPQ  384

Query  417  VIQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDP  476
             +Q L      H+   L V    L +        Q  I  T      +    ++   FD 
Sbjct  385  -LQILLGQLNSHRLQALGV---ELDEHPQTVDLLQRAIIDTPPATVRDGG--VIADGFDG  438

Query  477  NLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNN  536
             L ELR +  + +  + +         G+     +K+  +   GYY  V+  +   +   
Sbjct  439  ELDELRSMSRNADDYLAALEAEERAATGIPT---LKVGFNRVHGYYIEVSRSQSGHMP--  493

Query  537  KNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLN  596
            + ++     K   +F   +L    E+    +      + A+ +++V   +  + P+Q   
Sbjct  494  ERYTRRQTLKAAERFITPELKRFEEQVLSARERALAREKALYEQLVADLASELTPLQRSA  553

Query  597  DVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVY  656
              LA+LDA+ +FA  +    + YV+P + +    RI  +  RH  VE   +  F+PNDV 
Sbjct  554  SALAELDALAAFAERARS--LDYVQPELADTPGVRI--EGGRHPVVEQALDAPFVPNDVR  609

Query  657  FEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGD  716
             +  ++M  +ITGPNMGGKSTY+RQT +I L+A  G FVP + A +  +D I  R+GA D
Sbjct  610  LDNRRRML-LITGPNMGGKSTYMRQTALIALLAYAGAFVPAQRAVLGPIDRIFTRIGAAD  668

Query  717  SQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGA  776
                G STFM EM ETA+IL +AT +SL+++DE+GRGTST+DG  LAWA +E +AT+I A
Sbjct  669  DLASGRSTFMVEMTETANILHNATAESLVLMDEIGRGTSTFDGLALAWATAERLATRIRA  728

Query  777  FCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANF  836
            F +FATH+ E+TAL    P V N+H+ A    E +  L+ V+ G  +QS+G+ VA LA  
Sbjct  729  FTLFATHYFEMTALEQIHPGVVNVHLEAAEHGERIVFLHAVRDGPANQSYGLQVAALAGV  788

Query  837  PKHVIECAKQKALELE  852
            P+ V++ A++K   LE
Sbjct  789  PQEVLKAAREKLRSLE  804


>gi|15603695|ref|NP_246769.1|  DNA mismatch repair protein [Pasteurella multocida subsp. multocida 
str. Pm70]
Length=860

 Score =  259 bits (661),  Expect = 4e-67
 Identities = 187/635 (29%), Positives = 316/635 (49%), Gaps = 45/635 (7%)

Query  291  LTTFDFSQYMKLDIAAVRALNLFQ---GSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIK  347
            LT    S++++LD A  R L L Q   G  E+T     LA++L+KC TP G RL+ +W+ 
Sbjct  255  LTLLQHSEHIQLDAATRRNLELTQNLAGGSENT-----LASVLDKCVTPMGSRLLKRWMH  309

Query  348  QPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRL  407
            QP+    ++  R N + A ++  +L   +Q   L++  D+ R+  +   ++A  +D  RL
Sbjct  310  QPIRQHEKLMVRQNRITALLQQ-DLVAAIQP-YLQQIGDMERILARVALRSARPRDLTRL  367

Query  408  YQGINQLPNVIQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHE  467
               + Q+P +   L +         L   + P+ +  +     Q  I        ++N  
Sbjct  368  RTALEQIPYLRDILAQQTSSD----LTALLQPIGEFSAQLDLLQRAI--------IDNPP  415

Query  468  FLVKPS------FDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGY  521
             L++        ++  L E R + +   + ++          G+D    +K+  +A  GY
Sbjct  416  MLIRDGGVIAEGYNAELDEWRSLSDGATRYLEELEQRERESTGIDT---LKIGFNAVHGY  472

Query  522  YFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEI  581
            Y +++  + +  +   ++      KN  ++   +L +  ++  K K      +  + +++
Sbjct  473  YIQIS--QGQAHKAPMHYVRRQTLKNAERYIIPELKTYEDKVLKAKGAALALEKQLYEQL  530

Query  582  VNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHAC  641
             +    ++  +Q  +  LA+LD + + A       + YV P   +     + ++  RH  
Sbjct  531  FDELLPHLGALQLASLTLAELDVLTNLAE--RAETLNYVAPQFSD--DIGVHIQQGRHPV  586

Query  642  VEVQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAE  701
            VE      FI N V     + +  IITGPNMGGKSTY+RQT +I LMA +G FVP ESA 
Sbjct  587  VEQVLNAPFIANPVELHPQRHLL-IITGPNMGGKSTYMRQTALITLMAYMGSFVPAESAV  645

Query  702  VSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFG  761
            +  +D I  R+GA D    G STFM EM E A+IL  AT +SL++IDE+GRGTSTYDG  
Sbjct  646  IGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATANSLVLIDEIGRGTSTYDGLS  705

Query  762  LAWAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGV  821
            LAWA +E++A K+ +  +FATH+ ELT L  Q+    N+H+ A+   +T+  ++ V++G 
Sbjct  706  LAWACAEWLAKKLRSLTLFATHYFELTVLPEQLAGSANVHLDAIEHNDTIAFMHAVQEGA  765

Query  822  CDQSFGIHVAELANFPKHVIECAKQKALELEEFQYIGESQGY----DIMEPAAKKCYLER  877
              +S+G+ VA LA  P+ VI+ AKQK  +LE+       Q       + +   +   +E 
Sbjct  766  ASKSYGLAVAALAGVPQSVIKLAKQKLAQLEKLSQQNADQRIQDLRQLNQTQGELALMEE  825

Query  878  EQGEKIIQEFLSKVKQMPFTEMSEENITIKLKQLK  912
            +  +  + E L K+      E+S +     L QLK
Sbjct  826  DDSKTAVWEMLEKLDP---DELSPKQALAYLYQLK  857


>gi|76800771|ref|YP_325779.1|  DNA mismatch repair protein [Natronomonas pharaonis DSM 2160]
Length=856

 Score =  259 bits (661),  Expect = 4e-67
 Identities = 233/829 (28%), Positives = 382/829 (46%), Gaps = 84/829 (10%)

Query  36   LFDRGDFYTAHGEDALLAAR--EVFKTQGVIKYMGPAGAKNLQSVVLSKMNFESFVKDLL  93
            LF  GDFY    E A   AR  E+  TQ         G   +  + +   N ES++ + L
Sbjct  38   LFQVGDFYETFCEAAETTARLLEITLTQRE----DSTGTYPMAGIPID--NAESYI-ETL  90

Query  94   LVRQYRVEVYKN-RAGNKASKENDWYLAYKASPGNLSQFEDILFGNNDMSASIGVVGVKM  152
            L   YRV V     A   AS   D  +    +PG L++ E +   +N+  A +   G  +
Sbjct  91   LDAGYRVAVADQVEAAEAASGLVDRAVTRVVTPGTLTETELLAEADNNFVACL-TDGYGL  149

Query  153  SAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKEC------VLPGGET  206
            + +D     G  Y   + R  G+ +  + ++F   EA++    P +C      V P   +
Sbjct  150  ALLDVS--TGDCYATRLDRTAGVAD--ELERFDPAEAVVGPDAPTDCFGEDCMVTPYERS  205

Query  207  AGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLKGKKGEQMNSAVLPEMENQVA  266
            A ++   R           ER +A F +  +  D                          
Sbjct  206  AFELDAAR-----------ERVEAYFGSTALASDAE------------------------  230

Query  267  VSSLSAVIKFLELLSDDSNFGQFE-------LTTFDFSQYMKLDIAAVRALNLFQGSVED  319
            + +  A++ + E     +  G+ E       LT +D  +YM LD  AVR+L +F+     
Sbjct  231  IRACGALLAYAEYARGTTTDGETEPLDYINQLTRYDPREYMLLDAVAVRSLEIFEPRHVH  290

Query  320  TTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQED  379
                 +L   L++  +  G R +  W+++PL+D +RIE RL+ VEA VE    R+   E 
Sbjct  291  GLEGAALVETLDETASALGGRELRDWLRRPLLDADRIERRLDAVEALVERVSDRERASER  350

Query  380  LLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVFVTP  439
            L   + DL RL     R  A+ +D   L   ++ +P +   L+   G+ +KL        
Sbjct  351  LADVY-DLERLVAAVSRGRADARDLRALESTLSVVPELRACLDDAAGESEKL------AS  403

Query  440  LTDLRSDFSKFQEMIETTL-DMDQVENHEF-LVKPSFDPNLSELREIMNDLEKKMQSTLI  497
            + +   D +  +E+I+  + D   VE  E  +++  +D  L ELR    D +  +     
Sbjct  404  VRERLDDCTAVRELIDRAIVDSPPVEITEGGVIRDGYDERLDELRATERDGKAWIDDLEA  463

Query  498  SAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLT  557
                  G+D    +K+  ++  GYY  VT      + ++  +      KN  +F   +L 
Sbjct  464  KERERTGID---SLKVGHNSVHGYYIEVTNPNLDAVPDD--YQRRQTLKNSERFYTPELK  518

Query  558  SLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPV  617
               +E  + +   +E +    + +    +   E +Q     +A+LD + + A V+  A  
Sbjct  519  EREDEIIRAEDRADELEYERFRSVREEVAAATERIQETARAVAELDVLCALATVA--AQY  576

Query  618  PYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKST  677
             Y RP +   G   I ++  RH  VE + E +F+PN       + +  +ITGPNM GKST
Sbjct  577  DYCRPTVDADG---IYIEGGRHPVVE-RTESSFVPNPTDLPATEPLA-VITGPNMSGKST  631

Query  678  YIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILR  737
            Y+RQ  +  ++ Q+G FVP E A V I D +  RVGA D    G STFM EM E ++IL 
Sbjct  632  YMRQVALTSVLTQLGSFVPAERAAVPIFDRVFTRVGASDDIAGGRSTFMVEMTELSTILD  691

Query  738  SATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPTV  797
            +A   SL+++DE+GRGTST DG+ +A A +EY+  + GAF +FATH HELT +A ++P  
Sbjct  692  AADGRSLVVLDEVGRGTSTRDGYAIAQATTEYLHDEAGAFTLFATHHHELTDVAAELPQA  751

Query  798  NNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQ  846
             N H  A  T + +   + ++ G  + S+G+ VAE+A  P+ V++ A +
Sbjct  752  RNYHFAAARTADGVEFDHDLRPGAAEASYGVEVAEMAGVPEAVVDRADE  800


>gi|46128895|ref|ZP_00154530.2|  COG0249: Mismatch repair ATPase (MutS family) [Haemophilus influenzae 
R2846]
Length=861

 Score =  259 bits (661),  Expect = 4e-67
 Identities = 189/636 (29%), Positives = 325/636 (51%), Gaps = 62/636 (9%)

Query  300  MKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEER  359
            ++LD A  R L L Q     T    +L+++L+KC TP G RL+ +WI QP+ D  ++++R
Sbjct  267  IQLDAATRRNLELTQNLAGGT--ENTLSSVLDKCVTPMGSRLLKRWIHQPIRDVEKLKQR  324

Query  360  LNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQ  419
               + A + + +L   LQ   L+   D+ R+  +   ++A  +D  RL   + Q+P  ++
Sbjct  325  QQAI-AEILNFDLVDELQP-YLQLVGDMERILARVALRSARPRDLTRLRTALEQIP-ALR  381

Query  420  ALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPS------  473
            A+ + +          F+T L    +DFS+  ++++  L    +E    L++        
Sbjct  382  AIVQQK-------TPPFLTALFSQIADFSEQCDLLQRAL----IETPPLLIRDGGVIAEG  430

Query  474  FDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKE----  529
            ++  L E R + +   + +++         G+D    +K+  +A  GYY +++  +    
Sbjct  431  YNTELDEWRMLSDGATQYLENLEKRERESTGIDT---LKIGFNAVHGYYIQISQGQAHKA  487

Query  530  ------EKVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVN  583
                   + L+N + +   ++++   K   SK  +L              +  +  E+ +
Sbjct  488  PIHYVRRQTLKNAERYIIPELKEYEDKVLKSKGAALAL------------EKQLYDELFD  535

Query  584  ISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVE  643
            +   ++  +Q  +  L++LD +V+ A  ++   + YV P   ++   +I  +  RH  VE
Sbjct  536  LLLPHLGALQLASLALSELDVLVNLAERAD--TLNYVMPTFCDEVSVKI--ENGRHPVVE  591

Query  644  VQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVS  703
               +  FI N V    ++ +  +ITGPNMGGKSTY+RQT +I L+A IG FVP +SA + 
Sbjct  592  QVLKDPFIANPVELNHNRHLL-VITGPNMGGKSTYMRQTALITLLAYIGSFVPADSARIG  650

Query  704  IVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLA  763
             +D I  R+GA D    G STFM EM E A+IL  AT  SL++IDE+GRGTSTYDG  LA
Sbjct  651  PIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATVQSLVLIDEIGRGTSTYDGLSLA  710

Query  764  WAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCD  823
            WA +E++A KI +  +FATH+ ELTAL  Q+  + N+H+ AL    ++  ++ V+ G   
Sbjct  711  WACAEWLAKKIRSLTLFATHYFELTALPEQLEGIVNIHLDALEHNNSIAFMHAVQDGAAS  770

Query  824  QSFGIHVAELANFPKHVIECAKQKALELEEFQYIGESQGYDIMEPAAKKCYLEREQGEKI  883
            +S+G+ VA LA  P+ VI+ AKQK  +LE+       Q    +  A         QGE +
Sbjct  771  KSYGLAVAALAGVPQSVIKLAKQKLTQLEKNSSHSADQQIQALREA------NHNQGELL  824

Query  884  IQE----FLSKVKQMPFTEMSEENITIKLKQLKAEV  915
             ++        ++++   ++S +     L QLK  V
Sbjct  825  FEQETDALREAIEKLDPDDLSPKQALAYLYQLKKMV  860


>gi|69953330|ref|ZP_00640497.1|  MutS 1 protein [Shewanella frigidimarina NCIMB 400]
Length=861

 Score =  258 bits (660),  Expect = 5e-67
 Identities = 181/583 (31%), Positives = 299/583 (51%), Gaps = 62/583 (10%)

Query  291  LTTFDFSQYMKLDIAAVRALNLFQ---GSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIK  347
            +  F+ S+ + LD A  R L L Q   G  E+T     LA +L+   TP G R++ +WI 
Sbjct  260  IVRFNQSESIILDAATRRNLELTQNLSGGRENT-----LAWVLDNTATPMGSRMLQRWIH  314

Query  348  QPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRL  407
            +PL ++  I+ R + V   +E  +L QTL E L +   D+ R+  +   ++A  +D  RL
Sbjct  315  EPLRNRQTIQYRHSAVSELIEQ-DLYQTLHEQL-KSLGDIERIMARLALRSARPRDFSRL  372

Query  408  YQGINQLPNVIQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHE  467
             Q +  LP + Q L   +           +  L  L  +F +  +++E  +    V+N  
Sbjct  373  KQALTLLPEIQQTLAICQQPR--------LNTLVQLLGEFPEQHDLLERAI----VDNPP  420

Query  468  FLVKPS------FDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGY  521
             L++        ++  L E R++       +        +  G++    +K+  +   GY
Sbjct  421  MLIRDGGVIRTGYNNELDEWRKLSEGASDYLVELEAREKQQTGINT---LKVGYNRVHGY  477

Query  522  YFRVT----------CKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteye  571
            Y  V+           +  + L+  + + T ++++   K  +S+  +L            
Sbjct  478  YIEVSRLQSDRVPLSYQRRQTLKGTERYITPELKEYEEKVLSSQGKALAL----------  527

Query  572  eAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSN--GAPVPYVRPAILEKGQ  629
              +  + +++ ++    ++ +Q      A+LD + +FA  +       P +   I     
Sbjct  528  --EKQLWEQLFDLLLPKLQELQQFATAAAELDILSNFAERAELFNYQCPQMSHDI-----  580

Query  630  GRIILKASRHACVEVQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMA  689
              I ++A RH  VE   + AFI N V     +QM  I+TGPNMGGKSTY+RQ  +I LMA
Sbjct  581  -GINIEAGRHPVVERVSQAAFIANPVALTPQRQML-IVTGPNMGGKSTYMRQVALITLMA  638

Query  690  QIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDE  749
             IGCFVP + A++  +D I  R+GA D    G STFM EM ETA+IL +AT +SL+++DE
Sbjct  639  HIGCFVPADHAQIGEIDRIFTRIGASDDLASGRSTFMVEMTETANILHNATANSLVLMDE  698

Query  750  LGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVtalttee  809
            +GRGTSTYDG  LAW+ +EY+A  + A  +FATH+ ELT L   +P+V N+H+ A+  ++
Sbjct  699  IGRGTSTYDGLALAWSAAEYLAKNVSALTLFATHYFELTQLPELLPSVINVHLDAIEHDD  758

Query  810  tltMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELE  852
            T+  ++ V++G   +S+G+ VA LA  P  VI+ AK K  +LE
Sbjct  759  TIAFMHSVQEGAASKSYGLQVAALAGVPASVIKAAKHKLHQLE  801


>gi|50915171|ref|YP_061143.1|  DNA mismatch repair protein [Streptococcus pyogenes MGAS10394]
Length=851

 Score =  258 bits (659),  Expect = 6e-67
 Identities = 178/569 (31%), Positives = 300/569 (52%), Gaps = 31/569 (5%)

Query  291  LTTFDFSQYMKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPL  350
            L  ++   Y+++  A   +L+L + +  +     SL  LL++ KT  G RL+  WI +PL
Sbjct  241  LVHYEIKDYLQMSYATKSSLDLVENARTNKKHG-SLYWLLDETKTAMGMRLLRSWIDRPL  299

Query  351  MDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQG  410
            + K  I ER  +++ F+ +A + +T   + L+   D+ RL+ +     AN +D  +L   
Sbjct  300  VSKEAILERQEIIQVFL-NAFIERTDLSNSLKGVYDIERLSSRVSFGKANPKDLLQLGHT  358

Query  411  INQLPNVIQALEKHEGKHQKLLLAVFVTPLTD-LRSDFSKFQEM---IETTLDMDQVE--  464
            + Q+P +            K +L  F +P  D L +D     E+   I T +D D     
Sbjct  359  LAQVPYI------------KAILESFDSPCVDKLVNDIDSLPELEYLIRTAIDPDAPATI  406

Query  465  NHEFLVKPSFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFR  524
            +   +++  FD  L   R++M +    +        +  G++    +K+D + + GYYF 
Sbjct  407  SEGSIIRTGFDERLDHYRKVMREGTGWIADIEAKERQASGIN---NLKIDYNKKDGYYFH  463

Query  525  VTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNI  584
            VT     ++   ++F      KN  ++  ++L  +  +  + + E    +  I   I   
Sbjct  464  VTTSNLSLVP--EHFFRKATLKNSERYGTAELAKIEGQMLEAREESSSLEYDIFMCIRAQ  521

Query  585  SSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVE-  643
               Y+  +Q L  +LA +D + S A V+      Y+RP   +     I ++  RHA VE 
Sbjct  522  VETYINRLQKLAKILATVDVLQSLAVVAETNH--YIRPQFNDNHV--ITIQEGRHAVVEK  577

Query  644  VQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVS  703
            V     +IPN + F++   +  +ITGPNM GKSTY+RQ  + V+MAQ+G FV  +  ++ 
Sbjct  578  VMGVQEYIPNSISFDQQTSI-QLITGPNMSGKSTYMRQLALTVIMAQMGSFVAADHVDLP  636

Query  704  IVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLA  763
            + D I  R+GA D  + G STFM EM+E    ++ A+ +SLI+ DELGRGT+TYDG  LA
Sbjct  637  LFDAIFTRIGAADDLISGQSTFMVEMMEANQAIKRASDNSLILFDELGRGTATYDGMALA  696

Query  764  WAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCD  823
             AI EYI  ++GA  +FATH+HELT L+ ++ ++ N+HV  L  +  +T L+++ +G  D
Sbjct  697  QAIIEYIHDRVGAKTIFATHYHELTDLSTKLTSLVNVHVATLEKDGDVTFLHKIAEGPAD  756

Query  824  QSFGIHVAELANFPKHVIECAKQKALELE  852
            +S+GIHVA++A  PK +++ A +    LE
Sbjct  757  KSYGIHVAKIAGLPKSLLKRADEVLTRLE  785


>gi|51244692|ref|YP_064576.1|  DNA mismatch repair protein [Desulfotalea psychrophila LSv54]
Length=879

 Score =  258 bits (658),  Expect = 8e-67
 Identities = 195/658 (29%), Positives = 327/658 (49%), Gaps = 28/658 (4%)

Query  261  MENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLFQGSVEDT  320
            +E Q+A + L   + ++E     +     +L+  +    +++D ++ R L L Q ++   
Sbjct  240  VEGQIAAAIL---LDYIEETQKSAIHHIEKLSRLELDAILQIDDSSRRNLELTQ-TIVGG  295

Query  321  TGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDL  380
              S SL ++L+   TP G R + Q I  PL D+ RI  RLN V  F  ++E R  ++E L
Sbjct  296  NRSGSLLSVLDLTTTPMGARFLKQAILFPLQDRARILRRLNAVGYFFNNSEARHQIRE-L  354

Query  381  LRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVFVTPL  440
            L +  D+ RL  +    +AN +D   + Q + +LP ++  L K +   + + +   +  L
Sbjct  355  LDQVYDIERLNSRITLGSANGRDMLAMKQSLARLPEMLTELRKCD-TDELIEIEQTLDTL  413

Query  441  TDLRSDFSKFQEMIETTLDMDQVEN--HEFLVKPSFDPNLSELREIMNDLEKKMQSTLIS  498
             DL        ++++ ++  D   N     L++  ++  L E+  ++ D +K +      
Sbjct  414  EDLH-------QLLDKSIHPDPPTNIREGNLIREGYNAELDEIIVLLRDGKKLILDLEAK  466

Query  499  AARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTS  558
                 G+    ++K+  +  FGY+  V+  +    R  +++       N  +F   +L  
Sbjct  467  ERERTGI---AKLKVSYNRVFGYFIEVSRAQSS--RVPEHYIRKQTLVNAERFITPELKE  521

Query  559  LneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVP  618
               +    +    E +  +   + N  + +          LA LD   S A VS      
Sbjct  522  FETKVLGAEDRRLELEYQLFATVRNELASHSSRFLATAHQLALLDFYASAAEVSQ--QYN  579

Query  619  YVRPAILEKGQGRIILKASRHACVEVQDEIA-FIPNDVYFEKDKQMFHIITGPNMGGKST  677
            Y RP I  +  G + ++  RH  +E       F+PNDVY ++ +    +ITGPNM GKST
Sbjct  580  YHRPEI--RDDGSLEIREGRHPVIERSLPAGKFVPNDVYLDQAENEILVITGPNMAGKST  637

Query  678  YIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILR  737
             +RQT +IVLMAQ+G +VP +SA + +VD I  RVGA D   +G STFM EM ETA+IL 
Sbjct  638  VLRQTALIVLMAQMGYYVPADSARIGVVDRIFTRVGAMDDLRRGQSTFMVEMSETANILN  697

Query  738  SATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATK--IGAFCMFATHFHELTALANQIP  795
            +AT  SL+I+DE+GRGTSTYDG  +AWA++E++  K  IG   MFATH+HELT LA +  
Sbjct  698  NATPRSLVILDEIGRGTSTYDGLSIAWAVTEHLVQKDGIGVKTMFATHYHELTDLARRYA  757

Query  796  TVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEEFQ  855
             + N  +     ++++  L+++ KG   +S+GI VA LA  P  V+E A +    +E   
Sbjct  758  RIQNYSIAVREWQKSVIFLHKLIKGGTSRSYGIQVAALAGVPAQVVERAHEILHSIESGD  817

Query  856  YI-GESQGYDIMEPAAKKCYLEREQGEKIIQEFLSKVKQMPFTEMSEENITIKLKQLK  912
            ++ GE  G    +  ++    +         E  +K+++M   E++       L  LK
Sbjct  818  FLAGEKVGGQPQKELSEHKPHQPSLFAPPTDEIRTKIREMDLDELTPRQALDALYALK  875


>gi|15789477|ref|NP_279301.1|  DNA mismatch repair protein [Halobacterium sp. NRC-1]
Length=871

 Score =  258 bits (658),  Expect = 8e-67
 Identities = 205/665 (30%), Positives = 327/665 (49%), Gaps = 38/665 (5%)

Query  191  LIQIGPKECVLPGGETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLKGKKG  250
            L +  P E VLPG    GD   L  + +R    +T      F       D  R     + 
Sbjct  154  LYRFAPAE-VLPGPALRGDDDFLGVLRERTDATLTLHDAGAF-------DAGRATHRVR-  204

Query  251  EQMNSAVLPEM---ENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAV  307
            EQ    V+  +    +   V +  A + ++    +        +  F    +++LD    
Sbjct  205  EQFGDGVIESLGVAADGPVVRAAGAAVGYIAAADEGVLASVSRIQPFGGGDHVELDATTQ  264

Query  308  RALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFV  367
            R L L +     + GS  L A ++   +  G R +  W+ +P  D+  ++ R   V A  
Sbjct  265  RNLELTETMTGGSDGS--LLATIDHTASAAGGRRLAAWVTRPTRDRAELDRRQAAVGALA  322

Query  368  EDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQAL----EK  423
            + A  R  L  D+L    DL RLA +     A+  D  R+   +  LP+V  AL    E 
Sbjct  323  DAALARDALG-DVLGEIYDLERLASRAASGRADATDLLRVRDTLAALPDVADALTTTPEL  381

Query  424  HEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELRE  483
             E   + +L  V      D+R++ +          D  +  +   L++  +D  L EL  
Sbjct  382  AESPARDVLARVDRAAAADVRAELAD-----ALADDPPKTLSEGGLLQAGYDEALDELLA  436

Query  484  IMNDLEKKMQSTLISAARD-LGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKN--FS  540
              +D  +     L    +D LG+     +++D +   GYY +V   E   + + ++  + 
Sbjct  437  A-HDEHRAWLDGLADREKDRLGIT---HLQVDRNKTDGYYIQVGNSETDAVPDGEDGAYR  492

Query  541  TVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLA  600
             +   KN  ++T ++L S   E  + + E  E +  +   +          +Q +   LA
Sbjct  493  RIKQLKNATRYTMAELDSHEREVLRIEAERAELERELFAALRERVGERAAVLQDVGRALA  552

Query  601  QLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYFEKD  660
            ++DA+VS A   + A   +VRP ++  G G + + A RH  VE     +F+PND  F+  
Sbjct  553  EVDALVSLAE--HAAANQWVRPELVA-GDG-LDIDAGRHPVVE--QTTSFVPNDARFDAS  606

Query  661  KQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLK  720
            ++ F ++TGPNM GKSTY+RQ  VIVL+AQ+G FVP ++A + +VD I  RVGA D    
Sbjct  607  RR-FQVVTGPNMSGKSTYMRQVAVIVLLAQVGSFVPADAARIGLVDGIYTRVGALDELAG  665

Query  721  GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMF  780
            G STFM EM E + IL +AT DSL+++DE+GRGT+TYDG  +AWA +EY+  ++ A  +F
Sbjct  666  GRSTFMVEMEELSRILHAATSDSLVVLDEVGRGTATYDGISIAWAATEYLHNEVRATTLF  725

Query  781  ATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKHV  840
            ATH+HELTALA+ +  V N+HV A   +  +T L  V+ G  D+S+G+HVA LA  P+ V
Sbjct  726  ATHYHELTALADHLDAVVNVHVAAEERDGAVTFLRTVRDGATDRSYGVHVAALAGVPEPV  785

Query  841  IECAK  845
            ++ A+
Sbjct  786  VDRAR  790


>gi|88951707|ref|ZP_01154184.1|  MutS 1 protein [Methanosaeta thermophila PT]
Length=857

 Score =  258 bits (658),  Expect = 8e-67
 Identities = 181/605 (29%), Positives = 306/605 (50%), Gaps = 32/605 (5%)

Query  297  SQYMKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRI  356
            S+YM LD   +R L +F+ ++ D + S +L  +L++  TP G R + +W++ P M    I
Sbjct  247  SEYMLLDEITLRNLEIFR-NLRDGSRSGTLMEILDETVTPMGSRTLARWLQMPSMSLEVI  305

Query  357  EERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPN  416
              R + +E  V  A +R+ + E LL    DL R+  +     A  +D   L   + ++P 
Sbjct  306  RRRQDAIEEMVRRAVIREEISE-LLDGLSDLERIIGRVSLGNAGPKDLVALRSSLRRIPE  364

Query  417  VIQALEKHEGKHQKLLLAVFVTPLTDLRS--DFSKFQEMI---ETTLDMDQVENHEF--L  469
            +  A+   E ++           L ++R   D S+  +++   E  L  D   +     +
Sbjct  365  IAHAMSALESEY-----------LVEIRKRLDASELDDLVVLLERALSDDPPTSPRDGGV  413

Query  470  VKPSFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKE  529
            ++  + P L E+R  + +    +     S  +  G+   K +K+  +  FGYY  VT   
Sbjct  414  IRDGYSPELDEIRSALRNGRSWIAELESSERKRTGI---KSLKVGYNNVFGYYIEVTKPN  470

Query  530  EKVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYV  589
              ++ ++  +       N  +F   +L  +       +      +  +  ++    +   
Sbjct  471  LSMVPDD--YIRKQTLSNAERFVTRELKEVESRVLSAQERSSALEYEVFLDLRGQVASRT  528

Query  590  EPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIA  649
              +Q +   + +LD ++     +    +  VRP +++ G+  +IL+ SRH  ++   +  
Sbjct  529  RSVQEVAAAIGELDTILGLTRAALMGAM--VRP-VVDAGR-EVILRDSRHPVLDRVMKGG  584

Query  650  FIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCIL  709
            F+PND+  + +   F I+TGPNM GKST++RQ  +I +MAQIG FVP   A++ ++D I 
Sbjct  585  FVPNDLTMD-ESSWFMILTGPNMAGKSTFMRQVALIAIMAQIGSFVPASYAKIGLIDRIF  643

Query  710  ARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEY  769
             RVGA D  + G STFM EM E A+IL SATKDSLI++DE+GRGTST+DG  +AWA+SEY
Sbjct  644  TRVGARDDLVSGRSTFMVEMSELANILVSATKDSLILLDEIGRGTSTFDGLSIAWAVSEY  703

Query  770  IATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIH  829
            I ++I A  +FATH+H+LT L   +P + N  +       ++T L  V  G  ++S+GIH
Sbjct  704  IHSRIKAKTIFATHYHQLTQL--NLPGIVNYSMAVKEEGRSITFLRTVVPGATNKSYGIH  761

Query  830  VAELANFPKHVIECAKQKALELEEFQYIGESQGYDIMEPAAKKCYLEREQGEKIIQEFLS  889
            VA LA  P+HVI  A++    +EE   I   +      P      +   Q E I  + L 
Sbjct  762  VARLAGVPEHVIRRAEELLDIIEEQAAIEIRKCRSKERPKRYTQLIFFNQPESIDNDILE  821

Query  890  KVKQM  894
            ++K +
Sbjct  822  EIKNL  826


>gi|15674192|ref|NP_268367.1|  DNA mismatch repair protein [Lactococcus lactis subsp. lactis 
Il1403]
Length=840

 Score =  257 bits (657),  Expect = 1e-66
 Identities = 186/602 (30%), Positives = 314/602 (52%), Gaps = 34/602 (5%)

Query  258  LPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLFQGSV  317
            L  +ENQVA S L A +K  ++  D S+  + E   ++   ++++D A   +L L     
Sbjct  210  LTALENQVA-SKLLAYVKETQM-RDLSHLQEVE--HYEIKDFLQMDFATKSSLELTANKR  265

Query  318  EDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQ  377
            E+     +L  LL++ KT  G R++  WI +PL+  + I++R+ +V+ F++    R  L 
Sbjct  266  ENKKHG-TLYWLLDETKTAMGTRMLRSWIDRPLISNSAIQKRMEIVQIFLDHFFERSDLI  324

Query  378  EDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVF-  436
            E  L+   DL RLA +     A   D  +L   ++ +P +            K +L +  
Sbjct  325  E-ALKGVYDLERLASRVSFGKAVPVDFLQLANSLSNVPAI------------KYILGMLN  371

Query  437  VTPLTDLRSDFSKFQEM---IETTL--DMDQVENHEFLVKPSFDPNLSELREIMNDLEKK  491
              PL +L+S   +  E+   I + +  +  +      ++K  ++  L + RE + +    
Sbjct  372  EAPLEELKSQLDEIPELSGLINSAISENASRTITEGGIIKKGYNAQLDKYREALENGTSW  431

Query  492  MQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKF  551
            +           G+     +++D + + GYYF +T  + ++    ++F      KN  +F
Sbjct  432  IAKLEADEKAKTGIST---LRIDYNRKDGYYFHIT--QSQLNSVPEHFYRKATLKNSERF  486

Query  552  TNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHV  611
             + +LT + E   + + +    +  +   +   +  Y+  +Q L   +A++D + S + V
Sbjct  487  GSQELTEIEEIMLEAREKSSSLEYDLFMGLRTETEQYIGRLQALAKTIAEIDCLQSLSVV  546

Query  612  SNGAPVPYVRPAILEKGQGRIILKASRHACVE-VQDEIAFIPNDVYFEKDKQMFHIITGP  670
            +      Y+RP + + G   + +K  RHA VE V     ++PND+   +   +  +ITGP
Sbjct  547  AEKQG--YIRPTLTD-GSRIVEIKGGRHAVVEAVMGAQEYVPNDIELPEQTDI-QLITGP  602

Query  671  NMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEML  730
            NM GKSTY+RQ  + V+MAQIG FVP E+A + I D I  R+GA D+ + G STFM EM 
Sbjct  603  NMSGKSTYMRQFALTVIMAQIGSFVPAETANLPIFDAIFTRIGASDNLISGESTFMVEMS  662

Query  731  ETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTAL  790
            E    ++ A+  SLII DELGRGT+TYDG  LA AI EY+   IGA  +FATH+HELT L
Sbjct  663  EANHAIQKASSRSLIIFDELGRGTATYDGMALAQAIIEYVHDHIGAKTLFATHYHELTDL  722

Query  791  ANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALE  850
               +  ++N+HV  L     +T L+++ +G  D+S+GIHVA++A  P+ ++E A     +
Sbjct  723  DEALDHLDNVHVATLEQNGNVTFLHKITEGPADKSYGIHVAKIAGLPQPLLERADLILQK  782

Query  851  LE  852
            LE
Sbjct  783  LE  784


>gi|69256090|ref|ZP_00605705.1|  MutS 1 protein [Magnetococcus sp. MC-1]
Length=868

 Score =  257 bits (657),  Expect = 1e-66
 Identities = 182/557 (32%), Positives = 281/557 (50%), Gaps = 18/557 (3%)

Query  300  MKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEER  359
            M LD    R L L   +++D +   SL  ++++C TP G RL+ QWI +PL   + I  R
Sbjct  266  MVLDETCRRNLEL-NYNLKDGSRKSSLLGVMDRCITPMGSRLLAQWINRPLQSLDAIATR  324

Query  360  LNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQ  419
               V    E+    Q L+E L R   DL R   +   + A+ +D   L Q +  LP +  
Sbjct  325  QESVSWLRENLVAYQDLRERL-RMVHDLERFLSRIALRRASPRDLGGLRQTLQCLPQLYA  383

Query  420  ALEKHEGKHQKL--LLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPN  477
             L   +G    +  LL +         +   + ++ +   L ++  E     ++  FD  
Sbjct  384  ILTPADGHSLAVPSLLRILADHFNGHEALTKQLEQQLADELPLNLKEGET--IRLGFDQT  441

Query  478  LSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNK  537
            L  LR +  D +  +    +      G+ P  +IK   S  FGY   VT  +  + +   
Sbjct  442  LDTLRSLSRDGKSYLTKLEVEEREKTGI-PSLKIKYHRS--FGYSMEVT--KTHLDKVPP  496

Query  538  NFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLND  597
             +       NGV++   +L    E+    +    E +  + + +    +   E +Q    
Sbjct  497  RYIQRQTMTNGVRYVTEELKEYEEQLLTAEERMLEREQLLFEALAEQVARQAETLQASAR  556

Query  598  VLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRII-LKASRHACVEVQDEIAFIPNDVY  656
             +A LD + +FAH++      Y RP + E   G +I +   RH  VE   +  F+ ND+ 
Sbjct  557  AIATLDVLANFAHIAEERN--YCRPLLHE---GAVIEINQGRHPVVEQFSDTPFVANDIR  611

Query  657  FEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGD  716
             + ++Q   +ITGPNM GKST +RQ  +IVL+A  G  VP  SA++  VD I  RVGA D
Sbjct  612  LD-NRQRTGLITGPNMAGKSTLMRQVALIVLLAHTGACVPAGSAKIGRVDRIFTRVGASD  670

Query  717  SQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGA  776
                G STFM EM ETA IL  A++ SL+I+DE+GRGTSTYDG  +AWA++E+I T+  A
Sbjct  671  DLAGGRSTFMVEMTETAHILHHASERSLVILDEIGRGTSTYDGLSIAWAVAEHIHTQCQA  730

Query  777  FCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANF  836
              +FATH+HELT L +Q+  V NL V     ++ +  L+ + +G  D+S+GIHVA+LA  
Sbjct  731  RTLFATHYHELTQLESQLDGVFNLTVEVKEWKDQILFLHTIVRGAADRSYGIHVAQLAGL  790

Query  837  PKHVIECAKQKALELEE  853
            P+ V   A++   +LEE
Sbjct  791  PRAVTRRAREVLADLEE  807


>gi|71904476|ref|YP_281279.1|  DNA mismatch repair protein [Streptococcus pyogenes MGAS6180]
Length=851

 Score =  257 bits (657),  Expect = 1e-66
 Identities = 178/569 (31%), Positives = 300/569 (52%), Gaps = 31/569 (5%)

Query  291  LTTFDFSQYMKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPL  350
            L  ++   Y+++  A   +L+L + +  +     SL  LL++ KT  G RL+  WI +PL
Sbjct  241  LVHYEIKDYLQMSYATKSSLDLVENARTNKKHG-SLYWLLDETKTAMGMRLLRSWIDRPL  299

Query  351  MDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQG  410
            + K  I ER  +++ F+ +A + +T   + L+   D+ RL+ +     AN +D  +L   
Sbjct  300  VSKEAILERQEIIQVFL-NAFIERTDLSNSLKGVYDIERLSSRVSFGKANPKDLLQLGHT  358

Query  411  INQLPNVIQALEKHEGKHQKLLLAVFVTPLTD-LRSDFSKFQEM---IETTLDMDQVE--  464
            + Q+P +            K +L  F +P  D L +D     E+   I T +D D     
Sbjct  359  LAQVPYI------------KAILESFDSPCVDKLVNDIDSLPELEYLIRTAIDPDAPATI  406

Query  465  NHEFLVKPSFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFR  524
            +   +++  FD  L   R++M +    +        +  G++    +K+D + + GYYF 
Sbjct  407  SEGSIIRTGFDERLDHYRKVMREGTGWIADIEAKERQASGIN---NLKIDYNKKDGYYFH  463

Query  525  VTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNI  584
            VT     ++   ++F      KN  ++  ++L  +  +  + + E    +  I   I   
Sbjct  464  VTNSNLSLVP--EHFFRKATLKNSERYGTAELAKIEGQMLEAREESSSLEYDIFMCIRAQ  521

Query  585  SSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVE-  643
               Y+  +Q L  +LA +D + S A V+      Y+RP   +     I ++  RHA VE 
Sbjct  522  VETYINRLQKLAKILATVDVLQSLAVVAETNH--YIRPQFNDNHV--ITIQEGRHAVVEK  577

Query  644  VQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVS  703
            V     +IPN + F++   +  +ITGPNM GKSTY+RQ  + V+MAQ+G FV  +  ++ 
Sbjct  578  VMGVQEYIPNSISFDQQTSI-QLITGPNMSGKSTYMRQLALTVIMAQMGSFVAADHVDLP  636

Query  704  IVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLA  763
            + D I  R+GA D  + G STFM EM+E    ++ A+ +SLI+ DELGRGT+TYDG  LA
Sbjct  637  LFDAIFTRIGAADDLISGQSTFMVEMMEANQAIKRASDNSLILFDELGRGTATYDGMALA  696

Query  764  WAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCD  823
             AI EYI  ++GA  +FATH+HELT L+ ++ ++ N+HV  L  +  +T L+++ +G  D
Sbjct  697  QAIIEYIHDRVGAKTIFATHYHELTDLSTKLTSLVNVHVATLEKDGDVTFLHKIAEGPAD  756

Query  824  QSFGIHVAELANFPKHVIECAKQKALELE  852
            +S+GIHVA++A  PK +++ A +    LE
Sbjct  757  KSYGIHVAKIAGLPKSLLKRADEVLTRLE  785


>gi|29348530|ref|NP_812033.1|  DNA mismatch repair protein [Bacteroides thetaiotaomicron VPI-5482]
Length=862

 Score =  257 bits (657),  Expect = 1e-66
 Identities = 226/840 (26%), Positives = 385/840 (45%), Gaps = 61/840 (7%)

Query  23   FQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMGPAGAKNLQSVVLSK  82
            F  +  K    V LF  GDFY  +  DA++A+  +  T   +        K ++      
Sbjct  5    FLDLKAKHPDAVMLFRCGDFYETYSTDAIVASEILGIT---LTKRANGKGKTIEMAGFPH  61

Query  83   MNFESFVKDLLLVRQYRVEVYKNRAGNKASKEN-DWYLAYKASPGNLSQFEDILFGNNDM  141
               ++++  L+   + RV +       K +K+     +    +PG       + +  N+ 
Sbjct  62   HALDTYLPKLIRAGK-RVAICDQLEDPKLTKKLVKRGITELVTPGVSINDNVLNYKENNF  120

Query  142  SASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKECVL  201
             A++           G+   GV ++D    +    E P    F  ++ LL   GPKE + 
Sbjct  121  LAAVHF---------GKASCGVAFLDISTGEFLTAEGP----FDYVDKLLNNFGPKEILF  167

Query  202  PGGETA---GDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLKGKKGEQMNSAVL  258
              G+     G+ G      +    + TE    +           +LLK  + + +    +
Sbjct  168  ERGKRLMFEGNFGSKFFTFELDDWVFTESTARE-----------KLLKHFETKNLKGFGV  216

Query  259  PEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLFQGSVE  318
              ++N +  S   A++++L +           L   +  +Y++LD   VR+L L  GS+ 
Sbjct  217  EHLKNGIIASG--AILQYLTMTQHTQIGHITSLARIEEDKYVRLDKFTVRSLELI-GSMN  273

Query  319  DTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQE  378
            D  G  SL  ++++  +P G RL+ +W+  PL D+  I +RLN+VE F    + ++ ++E
Sbjct  274  D--GGSSLLNVIDRTISPMGARLLKRWMVFPLKDEKPINDRLNVVEYFFRQPDFKELIEE  331

Query  379  DLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQA-LEKHEGKHQKLLLAVFV  437
             L     DL R+  K      + ++  +L   +  +  + QA LE       ++     +
Sbjct  332  QL-HLIGDLERIISKVAVGRVSPREVVQLKVALQAIEPIKQACLEADNASLNRI--GEQL  388

Query  438  TPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIMNDLEKKMQSTLI  497
                 +R   +K     E   D   + N   ++K   +  L ELR I    +  +     
Sbjct  389  NLCISIRDRIAK-----EINNDPPLLINKGGVIKDGVNEELDELRRISYSGKDYLLQIQQ  443

Query  498  SAARDLGLDPGKQIKLDSSAQFGYYFRV-TCKEEKVLRNNKNFSTVDIQKNGVKFTNSKL  556
              +   G+     +K+  +  FGYY  V    ++KV +      T+    N  ++   +L
Sbjct  444  RESEQTGIP---SLKVAYNNVFGYYIEVRNIHKDKVPQEWIRKQTL---VNAERYITQEL  497

Query  557  TSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAP  616
                E+    + +    +  +  ++V   + ++  +Q   + +A+LD ++SFA+V+    
Sbjct  498  KVYEEKILGAEDKILVLETQLYTDLVQALTEFIPQIQINANQIARLDCLLSFANVARENN  557

Query  617  VPYVRPAILEKGQGRIILKASRHACVEVQDEIA--FIPNDVYFEKDKQMFHIITGPNMGG  674
              Y+RP I +     + ++  RH  +E Q  I   +I NDV  +   Q   IITGPNM G
Sbjct  558  --YIRPVIEDNDV--LDIRQGRHPVIEKQLPIGEKYIANDVMLDSASQQIIIITGPNMAG  613

Query  675  KSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETAS  734
            KS  +RQT +I L+AQIG FVP ESA + +VD I  RVGA D+   G STFM EM E A 
Sbjct  614  KSALLRQTALITLLAQIGSFVPAESAHIGLVDKIFTRVGASDNISVGESTFMVEMNEAAD  673

Query  735  ILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYI--ATKIGAFCMFATHFHELTALAN  792
            IL + +  SL++ DELGRGTSTYDG  +AWAI EYI    K  A  +FATH+HEL  +  
Sbjct  674  ILNNVSSRSLVLFDELGRGTSTYDGISIAWAIVEYIHEHPKAKARTLFATHYHELNEMEK  733

Query  793  QIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELE  852
                + N +V+    +  +  L ++++G  + SFGIHVA++A  PK +++ A     +LE
Sbjct  734  SFKRIKNYNVSVKEVDNKVIFLRKLERGGSEHSFGIHVAKMAGMPKSIVKRANTILKQLE  793


>gi|90020903|ref|YP_526730.1|  DNA mismatch repair protein MutS [Saccharophagus degradans 2-40]
Length=887

 Score =  257 bits (656),  Expect = 1e-66
 Identities = 182/580 (31%), Positives = 296/580 (51%), Gaps = 42/580 (7%)

Query  302  LDIAAVRALNLFQG--SVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEER  359
            LD A  R L L       ED T    L ++LN   T  G RL+ +W+  PL D   + +R
Sbjct  274  LDAATRRNLELDTNLAGTEDNT----LFSVLNTTTTAMGGRLLRRWLHSPLRDIYILNQR  329

Query  360  LNLVEAFVEDAE---LRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPN  416
             + +EA +++ +   LR TL     +   DL R+  +   ++A  +D  RL   I + P 
Sbjct  330  QSAIEALLDNYQFEPLRHTL-----KHISDLERILGRLALRSARPRDLSRLCASIAEFP-  383

Query  417  VIQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPS---  473
               A+++H       L  +    L  L  +  +F ++++  L    +EN   +++     
Sbjct  384  ---AIQQH-------LNGIDSPLLKKLAKEIREFPDLVDL-LSRALMENPPVVIREGGVI  432

Query  474  ---FDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEE  530
               FD  L ELR I  +    +           GL     +K+  +   GYY  ++  + 
Sbjct  433  AEGFDEELDELRAISTNAGDYLIKLEEQERAKTGLST---LKVGYNRVHGYYIEIS--KS  487

Query  531  KVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVE  590
            +       +      KN  +F   +L +  ++    K+     +  +  +++   +  + 
Sbjct  488  QASSAPTEYIRRQTLKNAERFITPELKTFEDKALSAKSRALAREKGLYDDLIETLNEQLR  547

Query  591  PMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAF  650
             +Q     +A+LD + + A  SN   + + +P + E G+G I ++  RH  VE   +  F
Sbjct  548  ELQVAASGVAELDVLTTLAERSN--LLNFCKPELYE-GEG-IFIEQGRHPVVEQVLDDPF  603

Query  651  IPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILA  710
            +PND+  + D++M  IITGPNMGGKSTY+RQT +IVL+AQIGC+VP  + ++ +VD I  
Sbjct  604  VPNDLLLDTDQRML-IITGPNMGGKSTYMRQTALIVLLAQIGCYVPASACKLGLVDRIFT  662

Query  711  RVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYI  770
            R+G+ D    G STFM EM ETA+IL +AT++SL+++DE+GRGTSTYDG  LAWA  E++
Sbjct  663  RIGSSDDLAGGRSTFMVEMTETANILNNATRNSLVLMDEIGRGTSTYDGLSLAWACVEHL  722

Query  771  ATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHV  830
            A  + AF +FATH+ ELT L   +  V N+H+ A    +++  L++++ G   +SFG+ V
Sbjct  723  ANNLHAFTLFATHYFELTGLPKALAGVQNVHLDATEHNDSIVFLHKIQPGPASKSFGLQV  782

Query  831  AELANFPKHVIECAKQKALELEEFQYIGESQGYDIMEPAA  870
            A+LA  P +VI  A      LE    +     +   EP A
Sbjct  783  AKLAGIPSNVIADAGGHLRRLEAQPTVDTPHQFPAPEPIA  822


>gi|54310168|ref|YP_131188.1|  DNA mismatch repair protein [Photobacterium profundum SS9]
Length=856

 Score =  257 bits (656),  Expect = 1e-66
 Identities = 176/570 (30%), Positives = 297/570 (52%), Gaps = 58/570 (10%)

Query  302  LDIAAVRALNLFQ---GSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEE  358
            LD A  R L L Q   G  ++T     LA++L+   TP G RL+ +W+ QP+ D  ++  
Sbjct  268  LDAATRRNLELTQNLSGGFDNT-----LASVLDHTATPMGSRLLKRWLHQPIRDTKQLNH  322

Query  359  RLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVI  418
            RL+ + AF +     +  +  +L    DL R+  +   ++A  +D  R+   +  LP + 
Sbjct  323  RLDAIAAFKDTGMFIEVAE--VLHHMGDLERILARLALRSARPRDLARMRSALQSLPQLA  380

Query  419  QALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVK------P  472
              L   E + +   LA +  P+ +L        E++E  +    +EN   +++      P
Sbjct  381  DLLADIE-QPRIGELAKYSAPMDELC-------ELLERAI----IENPPVIIRDGGVLAP  428

Query  473  SFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEE--  530
             ++  L E R++ +  +K +           G+D    +K+  +   G++ +++  +   
Sbjct  429  GYNAELDEWRDLADGAKKFLDDLETREREQHGID---SLKVGFNQVHGFFIQISRGQSHL  485

Query  531  --------KVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIV  582
                    + L+N + +   +++++  K  +SK  +L              +  + +E+ 
Sbjct  486  APDHYVRRQTLKNAERYIIPELKEHEDKVLSSKSKALGL------------EKKLWEELF  533

Query  583  NISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACV  642
            +    ++E +Q     L++LD + + A  ++   + Y RP + +  Q  I + A RH  V
Sbjct  534  DQLLPHLERLQNAASALSELDVLANLAERAD--TLNYCRPELTD--QTGIEIAAGRHPVV  589

Query  643  EVQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEV  702
            E      FI N      D++M  IITGPNMGGKSTY+RQT +I LMA +G FVP E+ ++
Sbjct  590  EQVLSEPFIANPTSLHHDRRML-IITGPNMGGKSTYMRQTALIALMAHVGSFVPAEAVKI  648

Query  703  SIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGL  762
              +D I  R+GA D    G STFM EM ETA+IL +AT  SL+++DE+GRGTSTYDG  L
Sbjct  649  GSLDRIFTRIGASDDLASGRSTFMVEMTETANILHNATSKSLVLMDEIGRGTSTYDGLSL  708

Query  763  AWAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVC  822
            AWA +E++A KI A  +FATH+ ELT L + +  + N+H+ A+   + +  ++ V++G  
Sbjct  709  AWASAEWLAEKISAMTLFATHYFELTELPSMMDGLANVHLDAVEHGDEIAFMHAVQEGAA  768

Query  823  DQSFGIHVAELANFPKHVIECAKQKALELE  852
             +S+G+ VA LA  PK VI+ AK K  +LE
Sbjct  769  SKSYGLAVASLAGVPKAVIKRAKAKLTQLE  798


>gi|15789484|ref|NP_279308.1|  DNA mismatch repair protein [Halobacterium sp. NRC-1]
Length=863

 Score =  257 bits (656),  Expect = 1e-66
 Identities = 181/572 (31%), Positives = 296/572 (51%), Gaps = 51/572 (8%)

Query  291  LTTFDFSQYMKLDIAAVRALNLF-QGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQP  349
            +T +  ++++++D  A+R+L LF Q SV  T G+ +L  +L++     G+R +  W+++P
Sbjct  267  VTRYSPTEHLQMDAVALRSLELFEQRSVHGTDGT-ALVDVLDETACALGRRKLTDWLRRP  325

Query  350  LMDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQ  409
            L+D + I  R + V   V D   R+ L E L R   D+ RL  +  R  AN +D   L  
Sbjct  326  LVDSDAIAARHDAVGELVADPLSREELHEHL-RDVYDIERLVSRVSRGRANARDLRALAD  384

Query  410  GINQLPNVIQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTL--DMDQVENHE  467
             +  +P V   L   + +         +  L +   D  + + +++  +  D  Q     
Sbjct  385  TLAVVPEVRGLLADADARK--------LQSLREALDDLPEIRGLLDRAIVADPPQELTDG  436

Query  468  FLVKPSFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVT-  526
             +++  +D  L +LR      ++ +     S     G+D    +K+  ++  GYY  VT 
Sbjct  437  GVIRDGYDERLDDLRATERAGKQWVDDLEASERERTGVD---SLKVGQNSVHGYYIEVTK  493

Query  527  ---------CKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAI  577
                      +  + L+N + + T ++++   +   ++               + AQD  
Sbjct  494  ANMDAVPEDYQRRQTLKNAERYVTPELKEREEEIVRAE---------------QRAQDLE  538

Query  578  VKEIVNISSGYVEP---MQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIIL  634
             +  V I     E    MQ +   LA +DA+ SFA V+  A   Y +P +   G   I +
Sbjct  539  YELFVGIRERVAEAAERMQAVARALAAVDALASFAAVA--AAHDYTKPVM---GGDGIHI  593

Query  635  KASRHACVEVQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCF  694
            +  RH  VE + E  F+PND     D+++  +ITGPNM GKSTY+RQ  VIV++AQ GCF
Sbjct  594  EGGRHPVVE-RTESGFVPNDTTLNDDRRVA-VITGPNMSGKSTYMRQVAVIVVLAQAGCF  651

Query  695  VPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGT  754
            VP  +AE+ +VD +  RVGA D    G STFM EM E ASILR+AT +SL+++DE+GRGT
Sbjct  652  VPAAAAELRVVDRVFTRVGASDDIAGGRSTFMVEMTELASILRAATDESLVLLDEVGRGT  711

Query  755  STYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltML  814
            +T DG  +A A++E+I   +GA  +FATH HELTA A+++P   NLH  A   ++ +   
Sbjct  712  ATTDGLAIARAVTEHIHDAVGATTLFATHHHELTADADRLPDALNLHFAATRGDDGVAFE  771

Query  815  YQVKKGVCDQSFGIHVAELANFPKHVIECAKQ  846
            + V+ G    S+G+ VA  A  P+ V++ A++
Sbjct  772  HAVRAGAATASYGVEVARTAGVPEPVVDRARE  803


>gi|46580059|ref|YP_010867.1|  DNA mismatch repair protein [Desulfovibrio vulgaris subsp. vulgaris 
str. Hildenborough]
Length=905

 Score =  257 bits (656),  Expect = 1e-66
 Identities = 205/679 (30%), Positives = 339/679 (49%), Gaps = 46/679 (6%)

Query  193  QIGPKECVLPGGETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLKGKKGEQ  252
            ++ P+E +LP G     M  L       G   T R  A  S  D+     R+++ +    
Sbjct  172  KMAPRELLLPEGVDTPAMATL-------GTTQTVRVPAR-SHFDLKSGTERVMRAQGVAD  223

Query  253  MNSAVL---PEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRA  309
            + S  L   PE+     V + +A++ +L                 +  +++ +D    R 
Sbjct  224  LGSLGLEGKPEL-----VRACAALLAYLAQTQKQELSHLAPFKPLNLGRHLIIDEVTERN  278

Query  310  LNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVED  369
            L LF   ++   G  +L  +L++  TP G RL+ + +  P  + + I E   +VE   +D
Sbjct  279  LELFH-RLDGRKGPGTLWHILDRTLTPMGGRLLEERMHHPWREASPIRETQQVVEWLFQD  337

Query  370  AELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKH---EG  426
               R+ L+  L   + DL RL+ +     A  +D   L Q ++ LP V   LE+    EG
Sbjct  338  DVRREALRTALDLVY-DLERLSTRIFLNRATPKDFIALRQSLSALPAVRATLERPANPEG  396

Query  427  KHQ---KLLLAVFVTPLTDLRS---DFSKFQEMIETTL--DMDQVENHEFLVKPSFDPNL  478
             +    +        PL+D+ S   D + + +++   L  +   +     L +P FDP+L
Sbjct  397  TYPTDAETSGDTLPKPLSDMLSAWDDLADYADLLRRALTDNPPHLVTEGGLFRPGFDPDL  456

Query  479  SELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKN  538
             EL ++    E ++Q  L       GL    ++KL  +  FGY+F ++      +   ++
Sbjct  457  DELLDLAEHGEARLQELLAEEQTVSGLP---KLKLGYNRVFGYFFELSRAGADSVP--EH  511

Query  539  FSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDV  598
            F       N  +FT  +L  L E+        +  +  + + + +  +     +  + D+
Sbjct  512  FVRRQTLANAERFTTERLKELEEKLVSATDRRKTLEYRLFQSLRDTVAEARPRVLFMADM  571

Query  599  LAQLDAVVSFAHVS--NGAPVPYVRPAILEKGQGRIILKASRHACVE-VQDEIAFIPNDV  655
            LA LD   S A V+  NG    +VRP +   G   I+++  RH  VE +Q   +F+PND+
Sbjct  572  LAHLDFWQSLADVARRNG----WVRPDV-HTGHD-IVIREGRHPVVEAMQGSASFVPNDL  625

Query  656  YFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAG  715
              ++ +++  +ITGPNM GKST +RQT +I L+AQ+G FVP   A + I D I +RVGA 
Sbjct  626  RMDEKRRLL-LITGPNMAGKSTVLRQTAIICLLAQMGAFVPAREASIGIADRIFSRVGAS  684

Query  716  DSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIG  775
            D+  +G STFM EM+ETA ILR A+K SL+I+DE+GRGTST+DG  LAWA+ E +  + G
Sbjct  685  DNLAQGQSTFMVEMMETARILRQASKRSLVILDEIGRGTSTFDGMALAWAVVEELTRRAG  744

Query  776  A--FCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAEL  833
                 +FATH+HE+T+L  +IP V+N+++        +  L ++  G  D+S+GI VA L
Sbjct  745  GGIRTLFATHYHEITSLEGRIPGVHNMNIAIREWNGDIVFLRRLVPGPADKSYGIEVARL  804

Query  834  ANFPKHVIECAKQKALELE  852
            A  P  V++ A++   +LE
Sbjct  805  AGVPHSVVQRARELLADLE  823


>gi|21911342|ref|NP_665610.1|  DNA mismatch repair protein [Streptococcus pyogenes MGAS315]
 gi|28896716|ref|NP_803066.1|  DNA mismatch repair protein [Streptococcus pyogenes SSI-1]
Length=851

 Score =  257 bits (656),  Expect = 1e-66
 Identities = 178/569 (31%), Positives = 300/569 (52%), Gaps = 31/569 (5%)

Query  291  LTTFDFSQYMKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPL  350
            L  ++   Y+++  A   +L+L + +  +     SL  LL++ KT  G RL+  WI +PL
Sbjct  241  LVHYEIKDYLQMSYATKSSLDLVENARTNKKHG-SLYWLLDETKTAMGMRLLRSWIDRPL  299

Query  351  MDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQG  410
            + K  I ER  +++ F+ +A + +T   + L+   D+ RL+ +     AN +D  +L   
Sbjct  300  VSKEAILERQEIIQVFL-NAFIERTDLSNSLKGVYDIERLSSRVSFGKANPKDLLQLGHT  358

Query  411  INQLPNVIQALEKHEGKHQKLLLAVFVTPLTD-LRSDFSKFQEM---IETTLDMDQVE--  464
            + Q+P +            K +L  F +P  D L +D     E+   I T +D D     
Sbjct  359  LAQVPYI------------KAILESFDSPCVDKLVNDIDSLPELEYLIRTAIDPDAPATI  406

Query  465  NHEFLVKPSFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFR  524
            +   +++  FD  L   R++M +    +        +  G++    +K+D + + GYYF 
Sbjct  407  SEGSIIRNGFDERLDHYRKVMREGTGWIADIEAKERQASGIN---NLKIDYNKKDGYYFH  463

Query  525  VTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNI  584
            VT     ++   ++F      KN  ++  ++L  +  +  + + E    +  I   I   
Sbjct  464  VTNSNLSLVP--EHFFRKATLKNSERYGTAELAKIEGQMLEAREESSSLEYDIFMCIRAQ  521

Query  585  SSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVE-  643
               Y+  +Q L  +LA +D + S A V+      Y+RP   +     I ++  RHA VE 
Sbjct  522  VETYINRLQKLAKILATVDVLQSLAVVAETNH--YIRPQFNDNHV--ITIQEGRHAVVEK  577

Query  644  VQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVS  703
            V     +IPN + F++   +  +ITGPNM GKSTY+RQ  + V+MAQ+G FV  +  ++ 
Sbjct  578  VMGVQEYIPNSISFDQQTSI-QLITGPNMSGKSTYMRQLALTVIMAQMGSFVAADHVDLP  636

Query  704  IVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLA  763
            + D I  R+GA D  + G STFM EM+E    ++ A+ +SLI+ DELGRGT+TYDG  LA
Sbjct  637  LFDAIFTRIGAADDLISGQSTFMVEMMEANQAIKRASDNSLILFDELGRGTATYDGMALA  696

Query  764  WAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCD  823
             AI EYI  ++GA  +FATH+HELT L+ ++ ++ N+HV  L  +  +T L+++ +G  D
Sbjct  697  QAIIEYIHDRVGAKTIFATHYHELTDLSTKLTSLVNVHVATLEKDGDVTFLHKIAEGPAD  756

Query  824  QSFGIHVAELANFPKHVIECAKQKALELE  852
            +S+GIHVA++A  PK +++ A +    LE
Sbjct  757  KSYGIHVAKIAGLPKSLLKRADEVLTRLE  785


>gi|15675890|ref|NP_270064.1|  DNA mismatch repair protein [Streptococcus pyogenes M1 GAS]
 gi|71911618|ref|YP_283168.1|  DNA mismatch repair protein [Streptococcus pyogenes MGAS5005]
Length=851

 Score =  256 bits (655),  Expect = 2e-66
 Identities = 178/569 (31%), Positives = 299/569 (52%), Gaps = 31/569 (5%)

Query  291  LTTFDFSQYMKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPL  350
            L  ++   Y+++  A   +L+L + +  +     SL  LL++ KT  G RL+  WI +PL
Sbjct  241  LVHYEIKDYLQMSYATKSSLDLVENARTNKKHG-SLYWLLDETKTAMGMRLLRSWIDRPL  299

Query  351  MDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQG  410
            + K  I ER  +++ F+ +A + +T   + L+   D+ RL+ +     AN +D  +L   
Sbjct  300  VSKEAILERQEIIQVFL-NAFIERTDLSNSLKGVYDIERLSSRVSFGKANPKDLLQLGHT  358

Query  411  INQLPNVIQALEKHEGKHQKLLLAVFVTPLTD-LRSDFSKFQEM---IETTLDMDQVE--  464
            + Q+P +            K +L  F +P  D L +D     E+   I T +D D     
Sbjct  359  LAQVPYI------------KAILESFDSPCVDKLVNDIDSLPELEYLIRTAIDPDAPATI  406

Query  465  NHEFLVKPSFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFR  524
            +   +++  FD  L   R++M +    +        +  G++    +K+D + + GYYF 
Sbjct  407  SEGSIIRNGFDERLDHYRKVMREGTGWIADIEAKERQASGIN---NLKIDYNKKDGYYFH  463

Query  525  VTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNI  584
            VT     ++   ++F      KN  ++  ++L  +  +  + + E    +  I   I   
Sbjct  464  VTNSNLSLVP--EHFFRKATLKNSERYGTAELAKIEGQMLEAREESSSLEYDIFMCIRAQ  521

Query  585  SSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVE-  643
               Y+  +Q L  +LA +D + S A V+      Y+RP   +     I ++  RHA VE 
Sbjct  522  VETYINRLQKLAKILATVDVLQSLAVVAETNH--YIRPQFNDNHV--ITIQEGRHAVVEK  577

Query  644  VQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVS  703
            V     +IPN + F++   +  +ITGPNM GKSTY+RQ  + V+MAQ+G FV  +  ++ 
Sbjct  578  VMGVQEYIPNSISFDQQTSI-QLITGPNMSGKSTYMRQLALTVIMAQMGSFVAADHVDLP  636

Query  704  IVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLA  763
            + D I  R+GA D  + G STFM EM+E    ++ A+ +SLI+ DELGRGT+TYDG  LA
Sbjct  637  LFDAIFTRIGAADDLISGQSTFMVEMMEANQAIKRASDNSLILFDELGRGTATYDGMALA  696

Query  764  WAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCD  823
             AI EYI  ++GA  +FATH+HELT L+  + ++ N+HV  L  +  +T L+++ +G  D
Sbjct  697  QAIIEYIHDRVGAKTIFATHYHELTDLSTNLTSLVNVHVATLEKDGDVTFLHKIAEGPAD  756

Query  824  QSFGIHVAELANFPKHVIECAKQKALELE  852
            +S+GIHVA++A  PK +++ A +    LE
Sbjct  757  KSYGIHVAKIAGLPKSLLKRADEVLTRLE  785


>gi|56808552|ref|ZP_00366286.1|  COG0249: Mismatch repair ATPase (MutS family) [Streptococcus 
pyogenes M49 591]
Length=794

 Score =  256 bits (655),  Expect = 2e-66
 Identities = 178/569 (31%), Positives = 300/569 (52%), Gaps = 31/569 (5%)

Query  291  LTTFDFSQYMKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPL  350
            L  ++   Y+++  A   +L+L + +  +     SL  LL++ KT  G RL+  WI +PL
Sbjct  184  LVHYEIKDYLQMSYATKSSLDLVENARTNKKHG-SLYWLLDETKTAMGMRLLRSWIDRPL  242

Query  351  MDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQG  410
            + K  I ER  +++ F+ +A + +T   + L+   D+ RL+ +     AN +D  +L   
Sbjct  243  VSKEAILERQEIIQVFL-NAFIERTDLSNSLKGVYDIERLSSRVSFGKANPKDLLQLGHT  301

Query  411  INQLPNVIQALEKHEGKHQKLLLAVFVTPLTD-LRSDFSKFQEM---IETTLDMDQVE--  464
            + Q+P +            K +L  F +P  D L +D     E+   I T +D D     
Sbjct  302  LAQVPYI------------KAILESFDSPCVDKLVNDIDSLPELEYLIRTAIDPDAPATI  349

Query  465  NHEFLVKPSFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFR  524
            +   +++  FD  L   R++M +    +        ++ G++    +K+D + + GYYF 
Sbjct  350  SEGSIIRNGFDERLDHYRKVMREGTGWIADIEAKERQESGIN---NLKIDYNKKDGYYFH  406

Query  525  VTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNI  584
            VT     ++   ++F      KN  ++  ++L  +  +  + + E    +  I   I   
Sbjct  407  VTNSNLSLVP--EHFFRKATLKNSERYGTAELAKIEGQMLEAREESSSLEYDIFMCIRAQ  464

Query  585  SSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVE-  643
               Y+  +Q L   LA +D + S A V+      Y+RP   +     I ++  RHA VE 
Sbjct  465  VETYINRLQKLAKTLATVDVLQSLAVVAETNH--YIRPQFNDNHV--ITIQEGRHAVVEK  520

Query  644  VQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVS  703
            V     +IPN + F++   +  +ITGPNM GKSTY+RQ  + V+MAQ+G FV  +  ++ 
Sbjct  521  VMGVQEYIPNSISFDQQTSI-QLITGPNMSGKSTYMRQLALTVIMAQMGSFVAADHVDLP  579

Query  704  IVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLA  763
            + D I  R+GA D  + G STFM EM+E    ++ A+ +SLI+ DELGRGT+TYDG  LA
Sbjct  580  LFDAIFTRIGAADDLISGQSTFMVEMMEANQAIKRASDNSLILFDELGRGTATYDGMALA  639

Query  764  WAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCD  823
             AI EYI  ++GA  +FATH+HELT L+ ++ ++ N+HV  L  +  +T L+++ +G  D
Sbjct  640  QAIIEYIHDRVGAKTIFATHYHELTDLSTKLISLVNVHVATLEKDGDVTFLHKIAEGPAD  699

Query  824  QSFGIHVAELANFPKHVIECAKQKALELE  852
            +S+GIHVA++A  PK +++ A +    LE
Sbjct  700  KSYGIHVAKIAGLPKSLLKRADEVLTRLE  728


>gi|90408946|ref|ZP_01217080.1|  DNA mismatch repair protein [Psychromonas sp. CNPT3]
Length=852

 Score =  256 bits (655),  Expect = 2e-66
 Identities = 182/569 (31%), Positives = 289/569 (50%), Gaps = 56/569 (9%)

Query  302  LDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLN  361
            LD A  + L L Q     T    +LA +L+   TP G RL+ +WI QP+ + N +  R  
Sbjct  270  LDAATRKNLELTQNLSGGT--DHTLAQILDVSVTPMGSRLLKRWIHQPIRNVNILNYRQT  327

Query  362  LVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQAL  421
            +++  + D +L   L E L ++  D+ R+  +   ++A  +D  RL      LP +   L
Sbjct  328  MIQTLI-DLDLCNALAEPL-KQIGDIERVIARLALRSARPRDLTRLRSAFALLPELQNLL  385

Query  422  EK--HEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVK------PS  473
             +  HE  H+             L ++   + E++ T L+   ++N   +++      P 
Sbjct  386  AELPHELVHK-------------LSTEMGNYPELL-TLLENAIIDNPPVIIRDGGVIAPG  431

Query  474  FDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCK-----  528
            ++  L E R +       ++   I      G+     +K+  +   GYY   +       
Sbjct  432  YNSELDEWRNLAKGATDYLKELEIRERESTGIST---LKVGYNRVHGYYIETSRHAADAV  488

Query  529  -----EEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVN  583
                   + L+N + +   +++++  K   S+  +L              +  +  +++ 
Sbjct  489  PAHYVRRQTLKNTERYIIAELKEHEDKVLVSQGKALAL------------EKKLYAQLIE  536

Query  584  ISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVE  643
                Y++ +Q     LA+LD + + A       + YVRP  L   +G II+   RH  VE
Sbjct  537  QLLPYLKALQFTAQSLAELDVLNTLAE--RALTLNYVRPT-LSPDRG-IIITDGRHPVVE  592

Query  644  VQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVS  703
              ++  FI N V    D++M  IITGPNMGGKSTY+RQ  +IVLMA IG F+P +SA + 
Sbjct  593  QVNKTPFIANPVALADDRRML-IITGPNMGGKSTYMRQVALIVLMAHIGSFIPAQSATIG  651

Query  704  IVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLA  763
             VD I  R+GA D    G STFM EM ETA+IL +ATK+SL+++DE+GRGTST+DG  LA
Sbjct  652  PVDRIFTRIGASDDLASGRSTFMVEMTETANILHNATKNSLVLMDEIGRGTSTFDGLSLA  711

Query  764  WAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCD  823
            WA +E +A KI A+ +FATH+ ELTAL   I  V N+H+ A    + +  L+ V  G  +
Sbjct  712  WACAEELALKIQAYTLFATHYFELTALPETIKEVVNVHLDAAEDGDNIIFLHAVHDGAAN  771

Query  824  QSFGIHVAELANFPKHVIECAKQKALELE  852
            +S+G+ VA LA  P  V++ AK+K  +LE
Sbjct  772  KSYGLQVAALAGVPSRVVKNAKRKLQQLE  800


>gi|81177192|ref|ZP_00876055.1|  MutS 1 protein [Streptococcus suis 89/1591]
Length=846

 Score =  256 bits (655),  Expect = 2e-66
 Identities = 181/564 (32%), Positives = 294/564 (52%), Gaps = 27/564 (4%)

Query  294  FDFSQYMKLDIAAVRALNLFQGSVEDTTGSQ--SLAALLNKCKTPQGQRLVNQWIKQPLM  351
            ++   Y+++D A   +L+L +      TG +  SL  LL++ KT  G RL+  WI +PL+
Sbjct  244  YEIKDYLQMDYATKSSLDLLENG---RTGKKHGSLYWLLDETKTAMGMRLLRTWIDRPLI  300

Query  352  DKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGI  411
            D  RIE R  +V+ F++    R  L E  L+   D+ RLA +        +D  +L Q +
Sbjct  301  DLKRIENRQAIVQVFLDYFFERSDLVE-ALKGVYDIERLASRVSFGKTMPKDLLQLSQTL  359

Query  412  NQLPNVIQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQ--VENHEFL  469
              +P +   L++        L+A  + P+ +L +       +I + +D +         +
Sbjct  360  GNIPAIKNILQQINEPALGNLVAG-LDPIPELHA-------LISSAIDPEAQGTITDGNI  411

Query  470  VKPSFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKE  529
            ++  FD  L + R ++ +    +           G++    +K+D + + GYYF VT   
Sbjct  412  IRTGFDETLDQYRLVIREGAGWIAEIEAKEREASGIN---NLKIDYNKKDGYYFHVT--N  466

Query  530  EKVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYV  589
              +     +F      KN  ++   +L  +  +  + + +    +  I   I      Y+
Sbjct  467  SNLGNVPDHFFRKATLKNSERYGTEELAKIEGQMLEARDKSANLEYEIFMRIRQEVEKYI  526

Query  590  EPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVE-VQDEI  648
              +Q L   +A +D + +FA V+    +  V P   +  Q  + +   RHA VE V  + 
Sbjct  527  GRLQKLARTIATIDVLQAFAVVAEQQHL--VCPRFTD--QRELTIDRGRHAVVEKVMGKQ  582

Query  649  AFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCI  708
             +IPN ++   D  M  +ITGPNM GKSTY+RQ  VIV+MAQ+G +VP + AE+ I D I
Sbjct  583  TYIPNSIHLNTDTHM-QLITGPNMSGKSTYMRQLAVIVIMAQMGSYVPADQAELPIFDAI  641

Query  709  LARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISE  768
              R+GA D  + G STFM EM+E    +R AT  SLI+ DELGRGT+TYDG  LA +I E
Sbjct  642  FTRIGAADDLVSGQSTFMVEMMEANKAVRLATDRSLILFDELGRGTATYDGMALAQSIIE  701

Query  769  YIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGI  828
            YI  KIGA  +FATH+HELT L+  +  + N+HV+ L  +  +T L+++ +G  D+S+GI
Sbjct  702  YIHDKIGAKTLFATHYHELTDLSQTLEHLENVHVSTLEKDGQVTFLHKIAQGPADKSYGI  761

Query  829  HVAELANFPKHVIECAKQKALELE  852
            HVA++A  P+ +++ A +    LE
Sbjct  762  HVAKIAGMPEELLQRADRILQTLE  785


>gi|56459853|ref|YP_155134.1|  DNA mismatch repair protein [Idiomarina loihiensis L2TR]
Length=843

 Score =  256 bits (654),  Expect = 2e-66
 Identities = 178/570 (31%), Positives = 290/570 (50%), Gaps = 49/570 (8%)

Query  302  LDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLN  361
            LD A  R L L Q   E   G   L+A+L+K  +  G R   +W+++P+ +   + +R +
Sbjct  248  LDAATRRNLELQQSMGE---GDTHLSAVLDKTVSAMGSRQFQRWLQRPIRNHQELNQRYD  304

Query  362  LVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQAL  421
             V+A  E+        +  L++  D+ R+  +   ++A  +D  RL   + ++P V  +L
Sbjct  305  AVDALKENLNFENI--QLTLKQLADIERIVARVGLRSARPKDFARLRDSLAKIPEVRASL  362

Query  422  EKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPS------FD  475
                              L+ L      F E+++  L    +E    L++        +D
Sbjct  363  SHRS--------------LSYLHDIIEPFPEVVDL-LTKAVIEQPPLLIRDGGVIAEGYD  407

Query  476  PNLSELREI-------MNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCK  528
              L ELR++       +  LE++ +     A   +G +      ++ S Q         +
Sbjct  408  KELDELRDLATGATDYLKQLEQRERERSGIATLKVGYNRVHGYFIEVSRQSSEAVPDDYQ  467

Query  529  EEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGY  588
              + L+N + +   +++++  K  N++  SL  E            D + + ++      
Sbjct  468  RRQTLKNTERYIIPELKEHEDKVLNAQARSLAREKWLY--------DQLFEHLLP----Q  515

Query  589  VEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEI  648
            V  +Q     LAQLD +  FA +++     Y RP  L+K    I L+A+RH  +E   + 
Sbjct  516  VTALQKSASGLAQLDTLCCFARLADN--YRYCRPQ-LQKETSLIELEAARHPVIEQLSDE  572

Query  649  AFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCI  708
             FI N +     ++M  +ITGPNMGGKSTY+RQ  +IV++A +GC+VP + A +  +D I
Sbjct  573  PFIANPMSLTPQQRML-MITGPNMGGKSTYMRQAALIVILAHMGCYVPADKAIIGDIDRI  631

Query  709  LARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISE  768
              R+GA D    G STFM EM ETA+IL +AT  SL+++DE+GRGTSTYDG  LAW+ ++
Sbjct  632  FTRIGASDDLASGRSTFMVEMTETANILHNATAKSLVLMDEIGRGTSTYDGLSLAWSCAD  691

Query  769  YIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGI  828
            Y++ ++    +FATH+ ELT LA ++P   N+HV A    +T+  L++V  G   QSFG+
Sbjct  692  YLSRQLQCLTLFATHYFELTELAEELPATVNVHVDAKEHGDTIAFLHKVSPGAASQSFGL  751

Query  829  HVAELANFPKHVIECAKQKALELEEFQYIG  858
             VA+LA  P+HVI  AKQK  ELE   + G
Sbjct  752  QVAKLAGVPEHVIHKAKQKLSELEHTHHGG  781


>gi|16330413|ref|NP_441141.1|  DNA mismatch repair protein [Synechocystis sp. PCC 6803]
Length=912

 Score =  256 bits (654),  Expect = 2e-66
 Identities = 234/851 (27%), Positives = 396/851 (46%), Gaps = 80/851 (9%)

Query  36   LFDRGDFYTAHGEDALLAAREVFKTQGVIKYMGPAGAKNLQSVVLSKMNFESFVKDL--L  93
            L+  GDF+    +DA++ ARE+      +      G K +  V ++ +   +  +    L
Sbjct  79   LYRVGDFFECFFQDAVIIAREL-----ELILTSKEGGKEIGRVAMTGVPHHALDRYARQL  133

Query  94   LVRQYRVEV---YKNRAGNKASKEN-DWYLAYKASPGNLSQFEDILFGNNDMSASIGVVG  149
            + + Y V +    ++ A  +A K   +  +    +PG L+    +    N+  A+I +V 
Sbjct  134  VEKGYAVAICDQVEDAAEAQAEKRMVERQVTKLLTPGTLTDDSMLPAKRNNFLAAIAMVE  193

Query  150  VKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKECVLPGGETAGD  209
             K          G+ + D    +   C+  + D   +L   L+++ P E ++P   +A D
Sbjct  194  DKW---------GLAHADISTGEFFTCQSSNLD---DLAVELLRLQPSEVLIP--TSAPD  239

Query  210  MGKLRQIIQRG------------GILITERKKADFSTKDIYQDLNRLLKGKKGEQMNSAV  257
               +R I++ G                + R +A FS  +  Q L    + K  E M    
Sbjct  240  ---IRNILRPGEPSEHIPKQLPTSFCYSLRSQAPFSLVEAKQRLLTTFRVKSLEGMGCEG  296

Query  258  LPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLFQGSV  317
            LP     +A+ +   +++++E            L T+  + ++ LD    R L + Q +V
Sbjct  297  LP-----LAIRAAGGLLEYIEDTQKAHVVPIQPLKTYGLTDFLVLDHQTRRNLEINQ-TV  350

Query  318  EDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQ  377
             D +   SL   L++  T  G R + +W+ QPL+D   I+ R + ++       LRQ L+
Sbjct  351  RDGSFHGSLLWALDRTSTTMGSRALRRWLLQPLLDLKGIQARQDTIQELYHHPALRQDLR  410

Query  378  EDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVFV  437
            + LLR+  DL RL  +     A+ +D Y L   + +L ++ +  +  EG H   L A+  
Sbjct  411  Q-LLRQIYDLERLTGRIGANTASARDVYGLASSLVRLTDLAELAQ--EG-HSPYLKALQT  466

Query  438  TPLTDLRSDFSKFQEMIETTLDMDQVENHEF------LVKPSFDPNLSELREIMNDLEKK  491
             P         + +E+ +  L    VEN         L++   +P L E+R+ + D  + 
Sbjct  467  VP--------PELEELGKYVL-AHIVENPPLHIREGNLIRSGVNPTLDEMRQSLEDDNQW  517

Query  492  MQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKF  551
            + +  ++     G+     +K+  +  FGYY  ++    K  +   N+       N  ++
Sbjct  518  LANLEVTEREKTGI---ANLKVGYNKAFGYY--LSLPRSKSEQAPDNYIRKQTLVNEERY  572

Query  552  TNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHV  611
               +L          + +  + +  I  E+    +   +P++ +   +A +D +   A V
Sbjct  573  ITPELKERETRILTAQADLNQLEYEIFTEVRATVAEKAQPIRDVAKAVAAIDVLAGLAEV  632

Query  612  SNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAF-IPNDVYFEKDKQMFH----I  666
            +      Y RP I++   G I ++A RH  VE      F + ND     D   +H    I
Sbjct  633  A--VYQGYCRP-IMQMEPGLIDIEAGRHPVVEQSLGAGFFVANDTQLGHDH--WHPDLVI  687

Query  667  ITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFM  726
            +TGPN  GKS Y+RQ G+I LMAQ G F+P ++A +SI D I  RVGA D    G STFM
Sbjct  688  LTGPNASGKSCYLRQVGLIQLMAQTGSFIPAKTATLSICDRIFTRVGAVDDLATGQSTFM  747

Query  727  AEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHE  786
             EM ETA+IL  AT  SL+++DE+GRGT+T+DG  +AW+++EY+A +I A  +FATH+HE
Sbjct  748  VEMNETANILNHATAKSLVLLDEIGRGTATFDGLAIAWSVAEYLAGEIQARTIFATHYHE  807

Query  787  LTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQ  846
            L  LA+ +  V N  VT     E +  L+QV  G  D+S+GI    LA  P  VI  A+Q
Sbjct  808  LNELASLLENVANFQVTVKELPEEIIFLHQVTPGGADKSYGIEAGRLAGLPSSVITRARQ  867

Query  847  KALELEEFQYI  857
               ++E+   I
Sbjct  868  VMAQIEKHSKI  878


>gi|83815782|ref|YP_445727.1|  DNA mismatch repair protein MutS [Salinibacter ruber DSM 13855]
Length=908

 Score =  256 bits (653),  Expect = 3e-66
 Identities = 231/841 (27%), Positives = 392/841 (46%), Gaps = 49/841 (5%)

Query  20   VRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMGPAGAKNLQSVV  79
            +R +  + E+    + LF  GDFY +  +DA   +R +  T   +       A ++    
Sbjct  15   MRQYYKIKERHPKAILLFRMGDFYESFDDDAKTVSRLLGIT---LTERNNGDADDVPMAG  71

Query  80   LSKMNFESFVKDLLLVRQYRVEVYKN--RAGNKASKENDWYLAYKASPGNLSQFEDILFG  137
                  +S +  L+     RV + +    A + + K  D  +    +PG    F D L  
Sbjct  72   FPHHALDSHLPKLIR-SGLRVAICEQVEDADDSSGKVVDRDVVEVVTPG--VSFHDQLLN  128

Query  138  NNDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPK  197
                +    +  +       + ++G  ++D+   +  + E         L+ L+  + P 
Sbjct  129  PKQSNF---LAALHFGTGRDKDRIGFSFIDATTGEFSVTEAG----LDQLQDLIQTVAPS  181

Query  198  ECVLPGGETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLKGKKGEQMNSAV  257
            E ++   +T     +L+Q ++     +TE++   F     YQ L   L+  +   +    
Sbjct  182  EVIVDKRKTE----RLQQHLREVPFTVTEQEDWVFKYDFAYQTL---LEHFETHSLKGFG  234

Query  258  LPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLFQGSV  317
            + +M+  V  S   A + +L      +     ++  +   +++ LD    R L L Q S+
Sbjct  235  VDDMDLGVVASG--AALHYLGETQKGALPHVRKIKRYSKDEHIALDPETKRNLELVQ-SI  291

Query  318  EDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQ  377
            +D     +L ++L++ +TP G R +  W+ +PL D  RI  RL+ VEA V+D  LR  L+
Sbjct  292  QDDGHEGTLVSILDETETPMGGRRLRAWLVRPLRDVGRIRHRLDAVEACVDDRTLRDDLR  351

Query  378  EDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVFV  437
            E+L  +  DL RLA K     A   D   +   + +LPNV+  L   +      +     
Sbjct  352  EEL-NQMGDLERLAGKVATGRAAPGDLIAIKHTLRRLPNVLGLLTDADSDALGAIE----  406

Query  438  TPLTDLRSDFSKFQEMIETTLDMDQVENHEF-LVKPSFDPNLSELREIMNDLEKKMQSTL  496
                DLRS       +    +D    +  E  L++  +   L ELR I  + +  + +  
Sbjct  407  ---DDLRSCPEMVDRIQSALVDDPPAKISEGGLIRDGYSEELDELRTIAQEGKDWVANLE  463

Query  497  ISAARDLGLDPGKQIKLDSSAQFGYYFRVT-CKEEKVLRNNKNFSTVDIQKNGVKFTNSK  555
               +    +     +K+  +  FGYY  VT    +KV  +     T+    +  ++   +
Sbjct  464  TEESERTDIP---SLKVGFNKVFGYYIEVTNTHADKVPEDYIRKQTL---VDSERYVTPE  517

Query  556  LTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGA  615
            L  + E+    + + E  +  +  E+ +  +     +Q   ++LA LD     A V+   
Sbjct  518  LKEMEEKILTAEEKIETLEQELFNELRSQIAQQTGILQENAELLAHLDCFAGLAEVAEQH  577

Query  616  PVPYVRPAILEKGQGRIILKASRHACVE--VQDEIAFIPNDVYFEKDKQMFHIITGPNMG  673
               Y RP++ + G   I ++  RH  VE  +     FIPND+  + D +   IITGPNM 
Sbjct  578  D--YTRPSV-DDGL-TIDIEEGRHPVVEQTLPPGDPFIPNDMALDPDDEQVLIITGPNMA  633

Query  674  GKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETA  733
            GKS  +RQ G+IVL+AQ+G FVP E+A++ +VD I  RVGA D+   G STF+ EM E A
Sbjct  634  GKSVALRQVGLIVLLAQVGSFVPAEAAQIGVVDRIFTRVGASDNLAAGESTFLVEMNEAA  693

Query  734  SILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYI--ATKIGAFCMFATHFHELTALA  791
            +IL +AT  SLI+ DE+GRGTST+DG  +AWAI EY+    ++ A  +FATH+HEL A+A
Sbjct  694  NILNNATARSLILFDEVGRGTSTFDGLSIAWAIVEYLHERPEVAARTLFATHYHELNAMA  753

Query  792  NQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALEL  851
            +++  V+N  +     E  +  L ++  G  D S+GI VA++A  P  VI  A++    L
Sbjct  754  DRLERVHNYRIQVSEHEGEIVFLRKLIPGGADHSYGIEVAKMAGLPDAVIARAREVLQNL  813

Query  852  E  852
            E
Sbjct  814  E  814


>gi|78685827|ref|ZP_00850602.1|  MutS 1 protein [Shewanella sp. ANA-3]
Length=861

 Score =  256 bits (653),  Expect = 3e-66
 Identities = 181/571 (31%), Positives = 290/571 (50%), Gaps = 38/571 (6%)

Query  291  LTTFDFSQYMKLDIAAVRALNLFQGSVEDTTGSQ--SLAALLNKCKTPQGQRLVNQWIKQ  348
            +T F+ +  + LD A  R L L Q    + +G +  +LAA+L+   T  G R++ +WI Q
Sbjct  260  ITRFNQTDTIVLDAATRRNLELTQ----NLSGGRDNTLAAVLDNTATAMGSRMLQRWIHQ  315

Query  349  PLMDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLY  408
            PL D  +I  R   V   +E          D L+   D+ R+  +   + A  +D  RL 
Sbjct  316  PLRDHAQIFARQTAVNELLETTAHESL--HDQLKALGDIERIMARLALRTARPRDFARLR  373

Query  409  QGINQLPNVIQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEF  468
            Q +N LP + Q+L +    H           L  L  +F + Q+++E  +    V+N   
Sbjct  374  QALNLLPQLQQSLAQLSAPH--------TVKLGQLLGEFPEEQQLLERAI----VDNPPM  421

Query  469  LVKPS------FDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYY  522
            L++        ++  L E R +       +           G+     +K+  +   GYY
Sbjct  422  LIRDGGVIREGYNAELDEWRGLSEGATDYLVQLEAREKERTGI---ATLKVGYNRVHGYY  478

Query  523  FRVT-CKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEI  581
              V+  + ++V  N +   T+   KN  ++   +L    E+   ++ +    +  +  E+
Sbjct  479  IEVSRLQSQQVPLNYQRRQTL---KNMERYITPELKEYEEKVLSSQGKALALEKQLWDEL  535

Query  582  VNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHAC  641
             ++    +  +Q      A+LD + +FA       + Y  P +    +  + ++A RH  
Sbjct  536  FDLILPKLHELQAFARAAAELDVLSNFAE--RAETLGYTCPEL--SSEIGVKIEAGRHPV  591

Query  642  VEVQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAE  701
            VE   +  FI N V     ++M  I+TGPNMGGKSTY+RQ  +I LMA IGCFVP + A 
Sbjct  592  VERVSQTPFIANPVTLHNQRRML-IVTGPNMGGKSTYMRQVALITLMAHIGCFVPADRAI  650

Query  702  VSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFG  761
            +  +D I  R+GA D    G STFM EM ETA+IL +AT  SL+++DE+GRGTSTYDG  
Sbjct  651  IGPIDRIFTRIGASDDLASGRSTFMVEMTETANILHNATAQSLVLMDEIGRGTSTYDGLS  710

Query  762  LAWAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGV  821
            LAW+ +EY+A ++GA  +FATH+ ELT L   +  V N+H+ A+  E+T+  ++ V++G 
Sbjct  711  LAWSAAEYLAQQVGAMTLFATHYFELTQLPELMAGVYNVHLDAIEHEDTIAFMHAVQEGA  770

Query  822  CDQSFGIHVAELANFPKHVIECAKQKALELE  852
              +S+G+ VA LA  P  VI+ AK K  +LE
Sbjct  771  ASKSYGLQVAALAGVPARVIKAAKHKLHQLE  801


>gi|78365764|ref|ZP_00836049.1|  MutS 1 protein [Shewanella sp. PV-4]
Length=855

 Score =  256 bits (653),  Expect = 3e-66
 Identities = 177/581 (30%), Positives = 293/581 (50%), Gaps = 58/581 (9%)

Query  291  LTTFDFSQYMKLDIAAVRALNL---FQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIK  347
            +T F+    + LD A  + L L    QG  ++T     LA++L+   TP G R++ +WI 
Sbjct  260  ITRFNQCDSIVLDAATRKNLELTRNLQGGSDNT-----LASVLDNTATPMGSRMLQRWIH  314

Query  348  QPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRL  407
            +PL + N I  R + ++  +++    ++L E L +   D+ R+  +   ++A  +D  RL
Sbjct  315  EPLRNHNIIRARHDAIDELLDNG-YHESLHEQL-KALGDIERITARLAIRSARPRDFARL  372

Query  408  YQGINQLPNVIQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHE  467
             Q +  LP + Q L      H K L +           DF +   ++   +    V+N  
Sbjct  373  RQALALLPEIQQQLADCNSPHLKALSSHL--------GDFPEEHALLSRAI----VDNPP  420

Query  468  FLV------KPSFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGY  521
             L+      K  +   L E R++       +       AR+        +K+  +   GY
Sbjct  421  MLIRDGGVIKEGYHNELDEWRKLSQGATDYLAEL---EAREKAATGASTLKVGYNRVHGY  477

Query  522  YFRVTCKEE----------KVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteye  571
            Y  V+ +E           + L+N + +   +++++  K  +S+  +L            
Sbjct  478  YIEVSRRESDLVPMSYQRRQTLKNTERYIVAELKEHEEKVLSSQGKALAL----------  527

Query  572  eAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGR  631
              +  + +E+ ++    +  +Q      A+LD + +FA       + Y RP +    Q  
Sbjct  528  --EKQLWEELFDLLMPRLHELQAFARAAAELDVITNFAE--RAEQLDYHRPELT--AQSG  581

Query  632  IILKASRHACVEVQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQI  691
            I ++A RH  VE   +  FI N V     ++M  I+TGPNMGGKSTY+RQ  +I LMA I
Sbjct  582  IHIEAGRHPVVERVSQTPFIANPVSLNPARRML-IVTGPNMGGKSTYMRQVALITLMAHI  640

Query  692  GCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELG  751
            G FVP + A +  VD I  R+GA D    G STFM EM ETA+IL +AT +SL+++DE+G
Sbjct  641  GSFVPAQKAAIGPVDRIFTRIGAADDLASGRSTFMVEMTETANILHNATPESLVLMDEIG  700

Query  752  RGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetl  811
            RGTSTYDG  LAW+ +E++A  + +  +FATH+ ELT L +Q+  V N+H+ A+  ++T+
Sbjct  701  RGTSTYDGLSLAWSAAEHLAQNLKSMTLFATHYFELTQLPDQMENVANVHLDAIEHDDTI  760

Query  812  tMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELE  852
              ++ V++G   +S+G+ VA LA  P  V++ AK K   LE
Sbjct  761  AFMHAVQEGAASKSYGLQVAALAGVPAKVVQAAKHKLHHLE  801


>gi|50119993|ref|YP_049160.1|  DNA mismatch repair protein [Erwinia carotovora subsp. atroseptica 
SCRI1043]
Length=854

 Score =  255 bits (652),  Expect = 4e-66
 Identities = 188/572 (32%), Positives = 290/572 (50%), Gaps = 40/572 (6%)

Query  302  LDIAAVRALNLFQ---GSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEE  358
            +D A  R L L Q   G VE+T     LAA+L+   T  G R++ +WI  P  D + +++
Sbjct  271  MDAATRRNLELTQNLSGGVENT-----LAAVLDCTVTAMGSRMLKRWIHMPSRDIDALKQ  325

Query  359  RLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVI  418
            R   + A     E+   LQ   LR+  DL R+  +   + A  +D  R+     Q P++ 
Sbjct  326  RQQAISAL---QEITPDLQP-YLRQVGDLERILARLALRTARPRDLARMRHAFQQFPDIR  381

Query  419  QALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVK------P  472
            + L   +           V  L  L   F + ++++E  +    VE    LV+      P
Sbjct  382  EQLAPLDTDS--------VRRLVSLIGQFDELRDLLERAV----VEAPPVLVRDGGVIAP  429

Query  473  SFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKV  532
             +   L E R + +     +    I     LGLD    +K+  +   GYY +V+  +  +
Sbjct  430  GYHTELDEWRALADGASDYLDRLEIREREKLGLDT---LKVGFNGVHGYYIQVSRGQSHL  486

Query  533  LRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPM  592
            +  +  +      KN  ++   +L    ++   +K +    + A+  E+ ++   ++  +
Sbjct  487  VPIH--YVRRQTLKNAERYIIPELKEYEDKVLTSKGKALALEKALYDELFDLLLPHLAEL  544

Query  593  QTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIP  652
            Q     LA+LD + + A  ++   + YV P + +K    I +   RH  VE      FI 
Sbjct  545  QQSAAALAELDVLTNLAERAD--TLNYVCPTLSDKPG--IKIAGGRHPVVEQVLREPFIS  600

Query  653  NDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARV  712
            N +     ++M  IITGPNMGGKSTY+RQ  +IVLMA IGCFVP + A +  VD I  RV
Sbjct  601  NPLSLSPQRRML-IITGPNMGGKSTYMRQAALIVLMAHIGCFVPADQAVIGPVDRIFTRV  659

Query  713  GAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIAT  772
            GA D    G STFM EM ETA+IL +AT++SL+++DE+GRGTSTYDG  LAWA +E +A 
Sbjct  660  GAADDLASGRSTFMVEMTETANILHNATENSLVLMDEIGRGTSTYDGLSLAWACAESLAN  719

Query  773  KIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAE  832
            +I A  +FATH+ ELT L  ++  V N+H+ A    +T+  ++ V+ G   +S+G+ VA 
Sbjct  720  RIKAMTLFATHYFELTTLPEKMEGVVNVHLDAREHGDTIAFMHSVQDGAASKSYGLAVAA  779

Query  833  LANFPKHVIECAKQKALELEEFQYIGESQGYD  864
            LA  PK VI+ A+QK  ELE       S   D
Sbjct  780  LAGVPKEVIKRARQKLKELETLSNNASSSHID  811


>gi|82498372|ref|ZP_00883873.1|  MutS 1 protein [Shewanella sp. MR-4]
Length=861

 Score =  255 bits (652),  Expect = 4e-66
 Identities = 182/571 (31%), Positives = 293/571 (51%), Gaps = 38/571 (6%)

Query  291  LTTFDFSQYMKLDIAAVRALNLFQGSVEDTTGSQ--SLAALLNKCKTPQGQRLVNQWIKQ  348
            +T F+ +  + LD A  R L L Q    + +G +  +LAA+L+   T  G R++ +WI Q
Sbjct  260  ITRFNQTDTIVLDAATRRNLELTQ----NLSGGRDNTLAAVLDNTATAMGSRMLQRWIHQ  315

Query  349  PLMDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLY  408
            PL D  +I  R   V   +E     ++L E L +   D+ R+  +   + A  +D  RL 
Sbjct  316  PLRDHAQIFARQTAVNELLETTA-HESLHEQL-KALGDIERIMARLALRTARPRDFARLR  373

Query  409  QGINQLPNVIQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEF  468
            Q +N LP + Q+L +    H           L  L  +F + Q+++E  +    V+N   
Sbjct  374  QALNLLPKLQQSLAQLSAPH--------TVKLGQLLGEFPEEQQLLERAI----VDNPPM  421

Query  469  LVKPS------FDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYY  522
            L++        ++  L E R +       +           G+     +K+  +   GYY
Sbjct  422  LIRDGGVIREGYNAELDEWRGLSEGATDYLVQLEAREKERTGI---ATLKVGYNRVHGYY  478

Query  523  FRVT-CKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEI  581
              V+  + ++V  N +   T+   KN  ++   +L    E+   ++ +    +  +  E+
Sbjct  479  IEVSRLQSQQVPLNYQRRQTL---KNMERYITPELKEYEEKVLSSQGKALALEKQLWDEL  535

Query  582  VNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHAC  641
             ++    +  +Q      A+LD + +FA       + Y  P +    +  + ++A RH  
Sbjct  536  FDLILPKLHELQAFARAAAELDVLSNFAE--RAETLGYTCPEL--SSEIGVKIEAGRHPV  591

Query  642  VEVQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAE  701
            VE   +  FI N V     ++M  I+TGPNMGGKSTY+RQ  +I LMA IGCFVP + A 
Sbjct  592  VERVSQTPFIANPVTLYNQRRML-IVTGPNMGGKSTYMRQVALITLMAHIGCFVPADRAI  650

Query  702  VSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFG  761
            +  +D I  R+GA D    G STFM EM ETA+IL +AT  SL+++DE+GRGTSTYDG  
Sbjct  651  IGPIDRIFTRIGASDDLASGRSTFMVEMTETANILHNATAQSLVLMDEIGRGTSTYDGLS  710

Query  762  LAWAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGV  821
            LAW+ +EY+A ++GA  +FATH+ ELT L   +  V N+H+ A+  E+T+  ++ V++G 
Sbjct  711  LAWSAAEYLAQQVGAMTLFATHYFELTQLPELMAGVYNVHLDAIEHEDTIAFMHAVQEGA  770

Query  822  CDQSFGIHVAELANFPKHVIECAKQKALELE  852
              +S+G+ VA LA  P  VI+ AK K  +LE
Sbjct  771  ASKSYGLQVAALAGVPARVIKAAKHKLHQLE  801


>gi|58584515|ref|YP_198088.1|  DNA mismatch repair protein [Wolbachia endosymbiont strain TRS 
of Brugia malayi]
Length=819

 Score =  255 bits (651),  Expect = 5e-66
 Identities = 232/853 (27%), Positives = 403/853 (47%), Gaps = 91/853 (10%)

Query  40   GDFYTAHGEDALLAAREVFKTQGVIKYMGPAGAKNLQSVVLSKMNFESFVKDLL------  93
            GDFY    +DA+ AA+ +     V+   G +  + +    +   + ES++  L+      
Sbjct  17   GDFYELFFDDAIKAAKLL---NIVLTKRGNSYGQEVPMCGVPAHSSESYLHKLIDLGFKV  73

Query  94   -LVRQYRVEVYKNRAGNKASKENDWYLAYKASPGNLSQFEDILFGNNDMSASIGVVGVKM  152
             +  Q        R G K+  + D  +    +PG + +   +   NN+  ASI       
Sbjct  74   AICDQLETADEAKRRGYKSIVKRD--VVRIVTPGTIVEDSLLEDKNNNYLASI-------  124

Query  153  SAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKECVLPGGETAGDMGK  212
              V    +  +G+++    K     F        L++ L++I PKE ++   E A D  K
Sbjct  125  --VKQNGEYAIGWLELSTGKF----FHTLTNLKALDSDLLRISPKELLI-SDELAEDE-K  176

Query  213  LRQIIQRGGILITERKKADFSTKDIYQDLNRLLKGKKGEQMNSAVLPEMENQVAVSSLSA  272
            +R I++   I IT+  ++ F      + L    K ++   + S       ++V + +  A
Sbjct  177  IRSILKNYKISITQHAQSFFEYNKSNRTLCEFYKVRELGVIGSF------SKVEIMACGA  230

Query  273  VIKFLELLSDDSNFGQFELTT-FDFSQYMKLDIAAVRALNLFQGSVEDTTGSQSLAALLN  331
            +++++++    S   + EL   +    +M +D +A R L LF     +  GS  L ++++
Sbjct  231  LLEYVKVTQRGS-VPRLELPEPYKQQNFMLVDASARRNLELFLTQFGEKKGS--LISVID  287

Query  332  KCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLA  391
               T  G RL+ Q +  PL     I  RL+ VE FV + E R+ ++E +L   PD+ R  
Sbjct  288  HTVTASGGRLLKQMLASPLACSKAINLRLSTVEFFVNNYESRKRIRE-ILSNIPDIERSL  346

Query  392  KKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVFVTPLTD------LRS  445
             +   +  + +D   L  G+ +   + + L K E    + LL  +V P+ D      L +
Sbjct  347  SRLMLERGSPKDINLLKVGLGKTLELSEFLYKIESGKNESLLQQYVIPVLDTGIQPALNA  406

Query  446  DFSKFQEMIETTLDMDQVENHEFL---------------------VKPSFDPNLSELREI  484
            + +   +  E +     + NH+ L                     + P ++  LSEL  +
Sbjct  407  EITVKSDENELSTIYKSLGNHKDLFELLNSAMLDNNLSSVKEGGFINPKYNQELSELSYV  466

Query  485  MNDLEKKMQSTLISAARDL-GLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVD  543
            +++   K+ + L  + RDL G+     +K+  +   GYY  V+        N+K  S + 
Sbjct  467  LSN-SNKLITRLRESYRDLTGI---AALKILHNNMLGYYIEVSA-------NHKITSDIF  515

Query  544  IQK----NGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVL  599
            I +    N +++T ++L  L  +    +      +  I  E+ +  +   E +    + L
Sbjct  516  IHRQSLANSMRYTTNELKELENKILTARDAVISLEIKIFGELCSEIAKESERIALTANAL  575

Query  600  AQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYFEK  659
            A+LD   +FA ++      Y +P I +  +  I     RH  VEV D+  FI N +    
Sbjct  576  AKLDIRTAFAELA--VQNDYTKPIINDSKEFNIC--NGRHPVVEVNDK--FIANSINLSG  629

Query  660  DKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQL  719
                 H+ITGPNM GKST++RQ  +I ++A +G FVP +SA + ++D I +RVGA D+  
Sbjct  630  ----IHLITGPNMAGKSTFLRQNALIAILAHMGSFVPADSAHIGVIDKIFSRVGATDNIT  685

Query  720  KGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCM  779
             G STFM EM+ETA+I+  AT  SL+I+DE+GRGT  YDG  +A A+ E+I        +
Sbjct  686  AGYSTFMVEMIETATIVNQATDRSLVILDEIGRGTGVYDGLSIAQAVIEHIHNVNKCRAI  745

Query  780  FATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKH  839
            FATH+HELT ++  + +V    V     +E +  L++V +GV D+S+GIHVA+LA FP  
Sbjct  746  FATHYHELTKVSKYLKSVKCFCVRIKEWKEEVIFLHEVVEGVADESYGIHVAKLAGFPDS  805

Query  840  VIECAKQKALELE  852
            ++  A +   EL+
Sbjct  806  ILNRASEVFKELK  818


>gi|19173014|ref|NP_597565.1|  DNA MISMATCH REPAIR PROTEIN [Encephalitozoon cuniculi GB-M1]
Length=730

 Score =  254 bits (650),  Expect = 7e-66
 Identities = 232/823 (28%), Positives = 378/823 (45%), Gaps = 143/823 (17%)

Query  35   RLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMGPAGAKNLQSVVLSKMNFESFVKDLLL  94
            + F RG+ Y+   ED  +  R   K          A  K  + + LSK   E  V+ LL 
Sbjct  34   KFFGRGEAYSVFNEDIEMVPRCSMKDV--------AERKEGKEMRLSKGEIEDVVRALLT  85

Query  95   VRQYRVEVYKNRAGNKASKENDWYLAYKASPGNLSQFEDILFGNNDMSASIGVVGVKMSA  154
              +  V+ Y+ R            L  +  PGN   F D+L    ++ +   V  VK+  
Sbjct  86   ESRVGVQEYEGRT-----------LVREGFPGNWKDFTDLLLDARNVPS---VAAVKLGD  131

Query  155  VDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKECVLPGGETAGDMGKLR  214
                  V V ++ + +  +    F D++  SNL  +L ++   E V              
Sbjct  132  A-----VEVSFLTTSESTIYTSTFEDDEILSNLYWILSEMNVIEVV--------------  172

Query  215  QIIQRGGILITERKKADFSTKDIYQDLNRL-LKG--KKGEQMNSAVLPEMENQVAVSSLS  271
                             +  K +   LNRL + G  ++GE+               S++ 
Sbjct  173  -----------------YDNKRLGDFLNRLGISGCLRRGEE---------------SAIK  200

Query  272  AVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLFQGSVEDTTGSQSLAALLN  331
             + ++L + S++S    +E   +      ++D + + +LN++  +       +   A   
Sbjct  201  LLCRYLRV-SEES----YEHKEYVRPFVCRVDRSVLSSLNVYNEN-------EHCVAKTF  248

Query  332  KCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLA  391
             C T QG RL+++ + QPL +K+ IE RL++V++        +TL   +L+RFPDL RL+
Sbjct  249  CCYTNQGWRLLHRMLLQPLRNKDEIERRLDIVDSL-------RTLNLGILKRFPDLLRLS  301

Query  392  KKFQRQAANLQDCYRLYQGINQLPNVIQ------ALEKHEGKHQKLLLAVFVTPLTDLRS  445
            K+      +L++  RL Q ++ +P ++       AL K  G+  K +   FV        
Sbjct  302  KRVSSGRVSLREILRLAQTVDTIPELMSSFSSSLALSKDVGETLKKIFLAFVP-------  354

Query  446  DFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIMNDLEKKMQSTLISAARDLGL  505
                F+  I   +D++  E + + V+P     L +L   + +++ KMQ       R  G+
Sbjct  355  ----FRNEITRVIDLEAAEENVYRVRPDVSERLQKLNRALAEVDGKMQKEY---ERVCGI  407

Query  506  DPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytk  565
             P  + K+D ++      +   +  + L   + F  +   K GV FT   L+ LNE    
Sbjct  408  YP--RAKVDRNSGAFKTAKAEYQRSQDLFKKEGFVELSFVKGGVSFTTRVLSLLNERRES  465

Query  566  nkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAIL  625
             K E ++ +  I+  +      Y   +++LN + A +D   +F+         Y RP + 
Sbjct  466  LKKEIDDEEKEIMDGVKTALKNYTPYLESLNHLTALVDVFSAFS--IKATLKGYSRPIV-  522

Query  626  EKGQGRIILKASRHACVEVQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVI  685
              G   + ++   H  +E QD   +IPN +  E D++M  ++TGPNMGGKST+++  GVI
Sbjct  523  --GGTMLEIENGFHPVLEDQD---YIPNSIKME-DRRMC-VVTGPNMGGKSTFLKTCGVI  575

Query  686  VLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLI  745
             L+A +GC+VP E A + I+D I  RVGAGD    G STFM EM + A I R ++ +SLI
Sbjct  576  ALLAHMGCYVPAEYASIPILDGIYTRVGAGDCSFTGSSTFMMEMADIARICRLSSPESLI  635

Query  746  IIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHEL---TALANQIPTVNNLHV  802
            IIDELGRGTS  DG  +A A+ E++  K  + C+ ATHF EL     L  +  +   L  
Sbjct  636  IIDELGRGTSAVDGLSIAQAVKEHLILK-KSLCLCATHFPELCGDDVLNKKAKSDGTL--  692

Query  803  taltteetltMLYQVKKGVCDQSFGIHVAELANFPKHVIECAK  845
                      ++Y+V  G+CD SFGI VAE   FP  VIE AK
Sbjct  693  ----------LMYEVVDGICDTSFGIMVAEKVGFPAEVIEMAK  725


>gi|78357019|ref|YP_388468.1|  DNA mismatch repair protein MutS [Desulfovibrio desulfuricans 
G20]
Length=904

 Score =  254 bits (650),  Expect = 7e-66
 Identities = 186/573 (32%), Positives = 300/573 (52%), Gaps = 27/573 (4%)

Query  295  DFSQYMKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKN  354
            + ++++ LD    R L LF+  ++   G  +L  +L+   TP G RL+ + +K P  ++ 
Sbjct  264  NLNRHLLLDEITERNLELFR-RLDGRKGKGTLWHVLDHTVTPMGGRLLQERLKHPWREQA  322

Query  355  RIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQL  414
             I+E    V  F     LR+ L+E L   + D+ RL+ +     A  +D   L Q +  L
Sbjct  323  PIDETQEAVSHFFAHNTLRRQLREALDTVY-DIERLSTRIFLNRATPRDYVALRQSLKAL  381

Query  415  PNVIQALE-------KHEGKHQKLLLAV--FVTPLTDLRSDFSKFQEMIETTL--DMDQV  463
            P V + LE       ++    ++L  A+  F+  +     D + + +++E  L  +   V
Sbjct  382  PAVRELLEAPQTGDGRYATPEEQLGAALPPFLHRMLKSWDDLADYHDLLEKALVDNPPHV  441

Query  464  ENHEFLVKPSFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYF  523
                 L +  F P L EL ++      K+   L    +  G+    +IKL ++  FGYYF
Sbjct  442  ITEGGLFRQGFHPALDELMDLSEHGASKLHDLLAEVQQTTGIS---KIKLGNNRVFGYYF  498

Query  524  RVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVN  583
             V     + L +   F       N  ++T+ +L  L E+      + +  +  + +++  
Sbjct  499  EVPKSVSEELPDT--FVRRQTLANAERYTSERLKELEEKLFSAADKRKTMELKLFQQLRE  556

Query  584  ISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVE  643
              +     +  + D+LA LD     A  +      +VRP +L  GQ  I+++  RH  VE
Sbjct  557  HVAQARPRVLFMADLLATLDHWQGLAEAARHWN--WVRP-VLHDGQD-IVIREGRHPVVE  612

Query  644  -VQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEV  702
             VQ    FIPND+  +  +++  +ITGPNM GKST +RQ  +I ++AQIG FVP   A +
Sbjct  613  AVQGPAGFIPNDLRIDDQRRLL-LITGPNMAGKSTVLRQAAIICILAQIGSFVPAREARI  671

Query  703  SIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGL  762
             + D I +RVGA D+  +G STFM EM+ETA ILR AT+ SL+I+DE+GRGTST+DG  L
Sbjct  672  GLCDRIFSRVGASDNLAQGQSTFMVEMMETARILRQATRRSLVILDEIGRGTSTFDGLAL  731

Query  763  AWAISEYIATK--IGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKG  820
            AWA+ E +  K   G   +FATH+HELT+L   IP V+N+++        +  L ++  G
Sbjct  732  AWAVVEELMKKQQAGIRTLFATHYHELTSLEGTIPGVHNMNIAIKEWGGEIVFLRRLVPG  791

Query  821  VCDQSFGIHVAELANFPKHVIECAKQKALELEE  853
              D+S+G+ VA+LA  P++V++ A+Q  LEL E
Sbjct  792  PSDRSYGVEVAKLAGVPQNVVQRARQ-ILELLE  823


>gi|24374941|ref|NP_718984.1|  DNA mismatch repair protein [Shewanella oneidensis MR-1]
Length=856

 Score =  254 bits (650),  Expect = 7e-66
 Identities = 182/573 (31%), Positives = 292/573 (50%), Gaps = 42/573 (7%)

Query  291  LTTFDFSQYMKLDIAAVRALNLFQGSVEDTTGSQ--SLAALLNKCKTPQGQRLVNQWIKQ  348
            +T F+ +  + LD A  R L L Q    + +G +  +LAA+L+   T  G R++ +WI Q
Sbjct  260  ITRFNQTDTIVLDAATRRNLELTQ----NLSGGRDNTLAAVLDNTATAMGSRMLQRWIHQ  315

Query  349  PLMDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLY  408
            PL D   I  R   V   +E A + ++L E L +   D+ R+  +   + A  +D  RL 
Sbjct  316  PLRDHALILARQTAVNELLETA-VHESLHEQL-KALGDIERIMARLALRTARPRDFARLR  373

Query  409  QGINQLPNVIQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEF  468
            Q ++ LP +  +L +    H           L  L  +F + Q+++E  +    V+N   
Sbjct  374  QALSLLPQLQLSLSQLSAPH--------TVKLGQLLGEFPQEQQLLEHAI----VDNPPM  421

Query  469  LVKPS------FDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYY  522
            L++        ++  L E R +       +           G+     +K+  +   GYY
Sbjct  422  LIRDGGVIREGYNAELDEWRGLSEGASDYLVQLEAREKERTGI---ATLKVGYNRVHGYY  478

Query  523  FRVTCKEEKVLRNNK---NFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVK  579
              V+      L++N+   N+      KN  ++   +L    E+   ++ +    +  +  
Sbjct  479  IEVSR-----LQSNQVPLNYQRRQTLKNMERYITPELKEYEEKVLSSQGKALALEKQLWD  533

Query  580  EIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRH  639
            E+ ++    +  +Q      A+LD + +FA       + Y  P +    +  + ++A RH
Sbjct  534  ELFDLILPKLHELQDFARAAAELDVLSNFAE--RAETLGYTSPEL--SSEIGVKIEAGRH  589

Query  640  ACVEVQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCES  699
              VE   +  FI N V     ++M  I+TGPNMGGKSTY+RQ  +I LMA IGCFVP E 
Sbjct  590  PVVERVSQTPFIANPVTLHNQRRML-IVTGPNMGGKSTYMRQVALITLMAHIGCFVPAER  648

Query  700  AEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDG  759
            A +  +D I  R+GA D    G STFM EM ETA+IL +AT  SL+++DE+GRGTSTYDG
Sbjct  649  ATIGPIDRIFTRIGASDDLASGRSTFMVEMTETANILHNATAQSLVLMDEIGRGTSTYDG  708

Query  760  FGLAWAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKK  819
              LAW+ +EY+A ++GA  +FATH+ ELT L   +  V N+H+ A+  E+T+  ++ V++
Sbjct  709  LSLAWSAAEYLAQQVGAMTLFATHYFELTQLPELMSGVYNVHLDAIEHEDTIAFMHAVQE  768

Query  820  GVCDQSFGIHVAELANFPKHVIECAKQKALELE  852
            G   +S+G+ VA LA  P  VI+ AK K  +LE
Sbjct  769  GAASKSYGLQVAALAGVPARVIKAAKHKLHQLE  801


>gi|88813098|ref|ZP_01128339.1|  DNA mismatch repair protein [Nitrococcus mobilis Nb-231]
Length=855

 Score =  254 bits (650),  Expect = 7e-66
 Identities = 222/821 (27%), Positives = 383/821 (46%), Gaps = 61/821 (7%)

Query  40   GDFYTAHGEDALLAAREVFKTQGVIKYMGPAGAKNLQSVVLSKMNFESFVKDLLLVRQYR  99
            GDFY    +DA  AAR +  T   +   G +  + +    +    +ES++  L  VR+  
Sbjct  35   GDFYELFYDDARRAARLLDIT---LTSRGESAGEPIPMAGVPVHAYESYLSKL--VRRGE  89

Query  100  VEVYKNRAGNKASKEN--DWYLAYKASPGNLSQFEDILFGNNDMSASIGVVGVKMSAVDG  157
                  + G+ A+ +   +  +    +PG L+  E +L    D   S  +  VK +A   
Sbjct  90   SVAICEQFGDPATTKGPVERRVVRIVTPGTLTD-EALL----DERRSALLAAVKCNA---  141

Query  158  QRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQII  217
              + G+  ++    +  + E    D+   L+A L ++ P E +L     A D+     I 
Sbjct  142  -ERFGIAALELASGRFTVSEINGADE---LQAELERLRPAELLL-----AEDVAAPASIA  192

Query  218  QRGGILITERKKADFSTKDIYQDLNRLLKGKKGEQMNSAVLPEMENQVAVSSLSAVIKFL  277
            QR G+  T R    F      Q   RLL  + G Q +      ++  +A+ +   +++++
Sbjct  193  QRPGL--THRPSWHFDI----QTAQRLLSRQFGTQ-DLHGFGVVDLPLAIGAAGCLLQYV  245

Query  278  ELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNL---FQGSVEDTTGSQSLAALLNKCK  334
                  +      L        + LD  + R L L     G+ E T     LA +L+   
Sbjct  246  SDTQRAALPHIRSLRVEAREDSLLLDATSRRNLELEYNLSGATEHT-----LAWVLDSAV  300

Query  335  TPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKF  394
            T  G RL+ +WI +PL D  R+  R   + AF+ +  L Q  ++  L    D+ R+  + 
Sbjct  301  TGMGSRLLRRWINRPLRDHERLRHRQQALAAFMGNGHLTQLREQ--LHGLADVERITARI  358

Query  395  QRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMI  454
              ++A  +D   L   + ++P +   LE  +           +  L +   D SK  +++
Sbjct  359  AMKSARPRDLTGLRAALRRVPEIRATLEHCDAPR--------LAALAEALGDHSKTSDLL  410

Query  455  ETTL-DMDQVENHEF-LVKPSFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIK  512
               L D   V   +  ++   +DP L ELR +  + ++ +           G+     +K
Sbjct  411  GRALVDTPPVLLRDGGVIAEGYDPPLDELRGLRRNADQYLLELEQREREATGI---ANLK  467

Query  513  LDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyee  572
            +  +   GYY  ++  +  +  ++  +      K   ++   +L S  ++    +     
Sbjct  468  VSYNRVHGYYIEISRGQSDLAPDH--YLRRQTLKGAERYITPELKSFEDKILSARERALL  525

Query  573  AQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRI  632
             +  + +E++   +  ++ +    + LA++D +   A  +    + Y RP +    Q R+
Sbjct  526  REKMLYEELLERLAAGLDALLRCAEALAEVDTLACLAERAEA--LSYTRPELT--AQPRV  581

Query  633  ILKASRHACVEVQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIG  692
             ++  RH  VE   E  F+ ND+  +   +M  I+TGPNMGGKST++RQT +IVL+A IG
Sbjct  582  WIEGGRHPVVEQVLEEPFVANDLSLDDSNRML-IVTGPNMGGKSTFMRQTALIVLLAHIG  640

Query  693  CFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGR  752
             FVP   A +  +D I  R+GA D    G STFM EM ETA+IL +AT +SL+++DE+GR
Sbjct  641  SFVPANQAVIGPIDRIFTRIGASDDLTGGRSTFMVEMTETAAILHNATPESLVLLDEIGR  700

Query  753  GTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetlt  812
            GT T+DG  LAWA +  +A ++GAF +FATH+ ELTAL     +  N+H+ A      + 
Sbjct  701  GTGTFDGLALAWATAADLAGRLGAFTLFATHYFELTALPEHYTSARNVHLDAAEHGTGIV  760

Query  813  MLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEE  853
             L+ +K+G  +QS+G+ VA LA  P  VI  A+ K  +LEE
Sbjct  761  FLHALKEGPANQSYGLQVATLAGIPPAVITAARHKLRQLEE  801


>gi|52426299|ref|YP_089436.1|  DNA mismatch repair protein [Mannheimia succiniciproducens MBEL55E]
Length=861

 Score =  254 bits (648),  Expect = 1e-65
 Identities = 195/642 (30%), Positives = 316/642 (49%), Gaps = 61/642 (9%)

Query  291  LTTFDFSQYMKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPL  350
            +T    ++ ++LD A  R L L Q     T    +LA++L+KC TP G RL+ +WI QP+
Sbjct  258  ITLIQNNENIQLDAATRRNLELTQNLAGGT--ENTLASVLDKCVTPMGSRLLKRWIHQPI  315

Query  351  MDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQG  410
                ++ +R  ++   ++  +L   LQ   L++  D+ R+  +   + A  +D  RL   
Sbjct  316  RHIQKLRQRQQIISEIIQ-LDLIGELQP-YLQQVGDMERILARVALRTARPRDLTRLRTA  373

Query  411  INQLPNVIQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLV  470
            + Q+P +   L     K+     A+F   + D    F+  Q+ I        ++N   L+
Sbjct  374  LEQIPTIKDIL-----KNSPKFTALF-QQIGDFDELFALLQQAI--------IDNPPLLI  419

Query  471  KPS------FDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFR  524
            +        ++  L E R + +   K ++   I      G+D    +K+  +A  GYY +
Sbjct  420  RDGGVIAEGYNAELDEWRALSDGATKYLEDLEIRERESTGIDT---LKVGFNAVHGYYIQ  476

Query  525  VTCKE----------EKVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQ  574
            ++  +           + L+N + F   +++    K   +K  SL  E            
Sbjct  477  ISQGQAHKAPIHYVRRQTLKNAERFIIPELKTYEDKVLKAKGASLALEKQLY--------  528

Query  575  DAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIIL  634
            DA+   ++     ++  +Q  +  L+ LD + + A       + YV P   ++   +I  
Sbjct  529  DALFDRLLP----HLGALQLASLTLSALDVLTNLAE--RAETLNYVAPDFSDEIGVKI--  580

Query  635  KASRHACVEVQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCF  694
            +  RH  VE   +  FI N V   + + +  IITGPNMGGKSTY+RQT +I LMA IG F
Sbjct  581  ENGRHPVVEQVLKEPFIANPVDLNQQRHLL-IITGPNMGGKSTYMRQTALITLMAYIGSF  639

Query  695  VPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGT  754
            VP ESA +  +D I  R+GA D    G STFM EM E A+IL  A  +SL++IDE+GRGT
Sbjct  640  VPAESALIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQAGANSLVLIDEIGRGT  699

Query  755  STYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltML  814
            STYDG  LAWA +E++A K+ +  +FATH+ ELT L  Q+    N+H+ AL   +++  +
Sbjct  700  STYDGLSLAWACAEWLAKKLRSLTLFATHYFELTVLPEQLAGTANVHLDALEHGDSIAFM  759

Query  815  YQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEEFQYIGESQGYD----IMEPAA  870
            + V+ G   +S+G+ VA LA  PK+V++ AKQK   LE+       Q       I +   
Sbjct  760  HAVQDGAASKSYGLAVAALAGVPKNVVKLAKQKLANLEKLSQQSADQKLQDLRTINQNQG  819

Query  871  KKCYLEREQGEKIIQEFLSKVKQMPFTEMSEENITIKLKQLK  912
            +   +E E G+    E L+   Q+   ++S +     L QLK
Sbjct  820  ELNLMEEEDGKNAALEMLA---QLDPDDLSPKQALAYLYQLK  858


>gi|78691428|ref|ZP_00856045.1|  MutS 1 protein [Shewanella sp. MR-7]
Length=861

 Score =  254 bits (648),  Expect = 1e-65
 Identities = 182/571 (31%), Positives = 292/571 (51%), Gaps = 38/571 (6%)

Query  291  LTTFDFSQYMKLDIAAVRALNLFQGSVEDTTGSQ--SLAALLNKCKTPQGQRLVNQWIKQ  348
            +T F+ +  + LD A  R L L Q    + +G +  +LAA+L+   T  G R++ +WI Q
Sbjct  260  ITRFNQTDTIVLDAATRRNLELTQ----NLSGGRDNTLAAVLDNTATAMGSRMLQRWIHQ  315

Query  349  PLMDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLY  408
            PL D  +I  R   V   +E     ++L E L +   D+ R+  +   + A  +D  RL 
Sbjct  316  PLRDHAQIFARQTAVNELLETTA-HESLHEQL-KALGDIERIMARLALRTARPRDFARLR  373

Query  409  QGINQLPNVIQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEF  468
            Q +N LP + Q+L +    H           L  L  +F + Q+++E  +    V+N   
Sbjct  374  QALNLLPQLQQSLAQLSAPH--------TVKLGQLLGEFPEEQQLLERAI----VDNPPM  421

Query  469  LVKPS------FDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYY  522
            L++        ++  L E R +       +           G+     +K+  +   GYY
Sbjct  422  LIRDGGVIREGYNAELDEWRGLSEGATDYLVQLEAREKERTGI---ATLKVGYNRVHGYY  478

Query  523  FRVT-CKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEI  581
              V+  + ++V  N +   T+   KN  ++   +L    E+   ++ +    +  +  E+
Sbjct  479  IEVSRLQSQQVPLNYQRRQTL---KNMERYITPELKEYEEKVLSSQGKALALEKQLWDEL  535

Query  582  VNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHAC  641
             ++    +  +Q      A+LD + +FA       + Y  P +    +  + ++A RH  
Sbjct  536  FDLILPKLHELQAFARAAAELDVLSNFAE--RAETLGYTCPEL--SSEIGVKIEAGRHPV  591

Query  642  VEVQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAE  701
            VE   +  FI N V     ++M  I+TGPNMGGKSTY+RQ  +I LMA IGCFV  + A 
Sbjct  592  VERVSQTPFIANPVTLHNQRRML-IVTGPNMGGKSTYMRQVALITLMAHIGCFVSADRAI  650

Query  702  VSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFG  761
            +  +D I  R+GA D    G STFM EM ETA+IL +AT  SL+++DE+GRGTSTYDG  
Sbjct  651  IGPIDRIFTRIGASDDLASGRSTFMVEMTETANILHNATAQSLVLMDEIGRGTSTYDGLS  710

Query  762  LAWAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGV  821
            LAW+ +EY+A +IGA  +FATH+ ELT L   +  V N+H+ A+  E+T+  ++ V++G 
Sbjct  711  LAWSAAEYLAQQIGAMTLFATHYFELTQLPELMAGVYNVHLDAIEHEDTIAFMHAVQEGA  770

Query  822  CDQSFGIHVAELANFPKHVIECAKQKALELE  852
              +S+G+ VA LA  P  VI+ AK K  +LE
Sbjct  771  ASKSYGLQVASLAGVPARVIKAAKHKLHQLE  801


>gi|85709591|ref|ZP_01040656.1|  DNA mismatch repair protein [Erythrobacter sp. NAP1]
Length=864

 Score =  254 bits (648),  Expect = 1e-65
 Identities = 181/564 (32%), Positives = 295/564 (52%), Gaps = 23/564 (4%)

Query  295  DFSQYMKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKN  354
            D S  M +D A   +L + +      TGS  L A L++C T  G RL+ Q +  PL+D  
Sbjct  255  DNSAGMVMDEATRGSLEILESQNGARTGS--LVAALDRCSTGAGSRLLAQDLSAPLLDHA  312

Query  355  RIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQL  414
             IE+RL+LV+ + E    R  L+ D+LR  PD+ R   +      + +D  ++  G+ + 
Sbjct  313  AIEDRLSLVQFWRERPIERANLR-DVLRALPDIGRALGRLVAGRGSPRDLGQIRDGLGEA  371

Query  415  PNVIQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSF  474
              +   L + + +    LL   V  L    +        +  +   ++  N  F+ +  +
Sbjct  372  WRLYYWLSREDDR--PALLEALVPQLAGHGALTDLLSRALVPSPPTER-SNGGFIAE-GY  427

Query  475  DPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKE-EKVL  533
            D +L ELRE+  +  + + +       + G+     +K+  +   GY+  V  +  + ++
Sbjct  428  DASLDELREVSGNARRAIAAMEARYREETGI---ASLKIKHNGVLGYFIEVPSRHGDALM  484

Query  534  RNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQ  593
              +  F+     K  V+F +  L       ++       A++A  +++V       E + 
Sbjct  485  APDSGFTHRQTMKGAVRFNSLSLHEEASRISEAGGRALAAEEAHFEDLVGAVVEAREAIA  544

Query  594  TLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVE-----VQDEI  648
                 LA++D  VS A+    +   + RP I E  +  + ++A RH  VE     V D  
Sbjct  545  ATAAALARID--VSAANAERASEGDWCRPEISE--EYALDIEAGRHPVVEAALAKVGDR-  599

Query  649  AFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCI  708
             F+ ND     D +++ +I GPNMGGKST++RQ  +IVLMAQ GCFVP  SA + +VD +
Sbjct  600  -FVANDCNLGCDDRLW-LIGGPNMGGKSTFLRQNALIVLMAQAGCFVPAASARIGLVDRL  657

Query  709  LARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISE  768
             +RVGA D+  +G STFM EM+ETA+IL  AT+ S +I+DE+GRGTSTYDG  LAWA+ E
Sbjct  658  FSRVGASDNLARGRSTFMVEMVETAAILSQATQRSFVILDEVGRGTSTYDGLALAWAVVE  717

Query  769  YIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGI  828
             + ++I   C+FATH+HEL+ LA    +++  HV A   +  L +L+++ +G  D+S+G+
Sbjct  718  GVHSRIECRCLFATHYHELSRLAESCESLSLHHVRAREWKGDLVLLHELAEGPADRSYGL  777

Query  829  HVAELANFPKHVIECAKQKALELE  852
             VA+LA  PK V+  AK    +LE
Sbjct  778  AVAKLAGVPKDVVARAKAVLEKLE  801


>gi|88608613|ref|YP_506224.1|  DNA mismatch repair protein MutS [Neorickettsia sennetsu str. 
Miyayama]
Length=815

 Score =  253 bits (647),  Expect = 2e-65
 Identities = 224/842 (26%), Positives = 394/842 (46%), Gaps = 96/842 (11%)

Query  40   GDFYTAHGEDALLAAREVFKTQGV-IKYMGPAGAKNLQSVVLSKMNFESFVKDLLLVRQY  98
            GDFY    EDA    REV    G+ +   G    K++    +   + E ++  L+ + + 
Sbjct  29   GDFYEMFFEDA----REVSHLLGLHLTRRGTYKGKDIPMCGVPVSSCEVYINKLVKLGRK  84

Query  99   RVEVYKNRAGNKASKENDWYLAYK-----ASPGNLSQFEDILFGNNDMSASIGVVGVKMS  153
                 +     +A K     +  +      +PG L++   ++ G N+    +        
Sbjct  85   VAICEQLETAEEAKKRGATAIVRRDVVRLVTPGTLTEDNLLVSGENNYLLCVA-------  137

Query  154  AVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKECVLPGGETAGDMGKL  213
               G+ ++G+ ++D   +K+           ++LE+ L +I PKE +LP    +    +L
Sbjct  138  --PGKNEIGLAWLDISTKKIVFTSANP----ASLESYLAKIEPKEVLLPDAIDS----EL  187

Query  214  RQIIQRGGILITERK----KADFSTKDIYQDLNRLLKGKKGEQMNSAVLPEMENQVAVSS  269
            R++I++  I IT R     + D++  ++    N L  G    +    +       VA  +
Sbjct  188  RKVIEQHNIHITRRPNNLFQFDYAANELRGFYNVLQLGFMDARSPCEI-------VACGA  240

Query  270  LSAVIKFLELLSDDSNFGQFELTTF----DFSQYMKLDIAAVRALNLFQGSVEDTTGSQ-  324
            L A  +  ++       G+ +   F    +   Y+ LD + +R L L +     T G + 
Sbjct  241  LIAYARATQM-------GELKRLEFPKRYEKGYYLALDASTIRGLELIESQ---TPGEKN  290

Query  325  SLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRF  384
            SL  ++++  T  G+RL+  +I  PL+    I+ R + VE F    ELR+ ++ +L    
Sbjct  291  SLLQVIDQTCTAGGKRLLKSYIVSPLISVEEIQARQDKVEFFFIQEELRKKVRTELAN-I  349

Query  385  PDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVFVTPLTD--  442
            PD  R   +         DC                L  H      LLLA   +   +  
Sbjct  350  PDAERALSRIALNRGEPIDC----------------LAVHSCMRSSLLLAECFSAFLENG  393

Query  443  -LRSDFSKF---QEMIETT----LDMDQVENHEFLVKPSFDPNLSELREIMNDLEKKMQS  494
             +RS + K     E++ET     L     +     + P+  P L EL  +  + +  +  
Sbjct  394  YIRSIYDKCAPDDELMETLRTAFLPTSNRKVDGPFLDPTHHPKLLELNRLSTNADVVIND  453

Query  495  TLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNS  554
             L +  R+ G++    +KL  +   GYY  V   +   L +++ F       N +++T  
Sbjct  454  LLNTYKRNTGIN---SLKLGKNNLIGYYVEVP--KSAPLLDSEVFIHRQSLLNNIRYTTL  508

Query  555  KLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNG  614
            +L +L  +  K    Y + +  + +E+         P++ +   +A+LD + SFA ++  
Sbjct  509  ELQNLEAQIAKANENYRKLELELFRELCGKILASEGPLKEMIAAIAELDVIASFAEIA--  566

Query  615  APVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYFEKDKQMFHIITGPNMGG  674
                YVRP +    + RI     RH  VE  +  AF+PND+ F   +++  ++TGPNM G
Sbjct  567  VQRKYVRPQVDNSNELRI--SGGRHPFVEQVN--AFVPNDLAFTSAERVC-VLTGPNMAG  621

Query  675  KSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETAS  734
            KSTY+RQ  +I ++AQ+G FVP +SA + +VD + +R+GA D+   G STFM EM+ETA+
Sbjct  622  KSTYLRQNALITILAQMGSFVPADSAHIGVVDRVFSRIGASDNIAMGKSTFMVEMMETAN  681

Query  735  ILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQI  794
            I+ +AT  SL+I+DE+GRGTST DG  +A A+ EY+   +    +FATH++EL  L +++
Sbjct  682  IVNNATCRSLVILDEVGRGTSTLDGISIAQAVLEYLHDSVNCKTIFATHYNELCDLESKL  741

Query  795  PTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKHVI----ECAKQKALE  850
            P +    +      + + ++Y++  G  D S+GIH A L+  P+ +I    E AK+K L 
Sbjct  742  PRMKCYSIEVKRWRDEVLLMYKIVPGRGDNSYGIHTAMLSGIPEAIIRRATEIAKEKNLS  801

Query  851  LE  852
            +E
Sbjct  802  IE  803


>gi|52842032|ref|YP_095831.1|  DNA mismatch repair protein [Legionella pneumophila subsp. pneumophila 
str. Philadelphia 1]
Length=865

 Score =  253 bits (646),  Expect = 2e-65
 Identities = 174/609 (28%), Positives = 304/609 (49%), Gaps = 42/609 (6%)

Query  260  EMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLFQGSVED  319
            E     A+ +  A++ +L+     S      LT      Y++LD +  + L LF+     
Sbjct  240  EQNYPTALIAAGALLAYLKTTQKQSLPHLTTLTLEQSEDYLQLDASTQKHLELFENI--H  297

Query  320  TTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFV---EDAELRQTL  376
              G   L ++L+K     G RL+ +W+ +PL     I+ R   ++  +   +D  L Q  
Sbjct  298  GGGEHCLLSILDKTACAMGSRLLKRWLGKPLKQHAIIQTRQQAIKEIIFLQQDVSLHQ--  355

Query  377  QEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVF  436
               L+++  D+ R+  +   ++A  +D   L Q +  LP +   L++++        ++ 
Sbjct  356  ---LIKQCADVERIVSRIALKSARPRDLVSLLQTLTLLPAIHDELQENK--------SLL  404

Query  437  VTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVK------PSFDPNLSELREIMNDLEK  490
            +  +    S     Q+++ET +    ++N   L++      P FD  L ELR + ++  +
Sbjct  405  INEIKKEISPLPLLQQLLETAI----IDNPPMLIRDGGVIAPGFDEELDELRNLSSNAHE  460

Query  491  KMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVK  550
             +           GL     +KL  ++  G+Y  ++  + +      +F      KN  +
Sbjct  461  TLVKLEQEEKNRTGLST---LKLGYNSVQGFYIELS--KAQAQNAPPHFHRKQTLKNVER  515

Query  551  FTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAH  610
            +   +L    ++    +++    +  +   ++     Y+  +  L   LAQLD +V+ A 
Sbjct  516  YITPELKLFEDKVLSAQSKALAREKWLYDNLLEEIQQYIPELSDLAKSLAQLDVLVTLAE  575

Query  611  VSNGAP--VPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYFEKDKQMFHIIT  668
             +       P + P      +  I+++A RH  +E   +  FI ND+  + ++ M  +IT
Sbjct  576  RAQSLNWNCPNLVP------ESGIMIQAGRHPVIEPLLQERFIANDLELKPNQNML-LIT  628

Query  669  GPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAE  728
            GPNMGGKSTY+RQT +IVL+A IG FVP +   +  +D I  R+GA D    G STFM E
Sbjct  629  GPNMGGKSTYMRQTALIVLLAHIGSFVPADKVTLGPLDRIFTRIGASDDLSSGRSTFMVE  688

Query  729  MLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELT  788
            M ETA ILR AT  SL++IDE+GRGTSTYDG  LA+A   ++A+ I A+ +F+TH+ ELT
Sbjct  689  MTETAQILRQATSQSLVLIDEIGRGTSTYDGMALAYASCAFLASTIKAYTLFSTHYLELT  748

Query  789  ALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKA  848
             L  +   + N+H+ A      +  LY+V++G  ++S+G+ VAELA  PK V++ A +  
Sbjct  749  ELPKEFSCIRNVHLQASIKTGQIVFLYRVEEGCANRSYGLEVAELAGIPKEVLKLAHEHL  808

Query  849  LELEEFQYI  857
             ++++ Q I
Sbjct  809  NQIQDTQSI  817


>gi|56414858|ref|YP_151933.1|  DNA mismatch repair protein [Salmonella enterica subsp. enterica 
serovar Paratyphi A str. ATCC 9150]
Length=855

 Score =  253 bits (646),  Expect = 2e-65
 Identities = 185/561 (32%), Positives = 291/561 (51%), Gaps = 42/561 (7%)

Query  302  LDIAAVRALNLFQ---GSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEE  358
            +D A  R L + Q   G VE+T     LAA+L+   TP G R++ +W+  P+ + + + E
Sbjct  271  MDAATRRNLEITQNLAGGVENT-----LAAVLDCTVTPMGSRMLKRWLHMPVRNTDILRE  325

Query  359  RLNLVEAFVEDAELRQTLQE--DLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPN  416
            R   + A      L+ T+ E   +LR+  DL R+  +   + A  +D  R+     QLP 
Sbjct  326  RQQTIGA------LQDTVSELQPVLRQVGDLERILARLALRTARPRDLARMRHAFQQLPE  379

Query  417  VIQALEKHEGKHQKLLLAVFVTPLTDLRS---DFSKFQEMIETTL-DMDQVENHEF-LVK  471
            +   LE            V   P+  LR    DF++ ++++E  + D   V   +  ++ 
Sbjct  380  LHAQLE-----------TVGSAPVQALRKKMGDFAELRDLLERAIIDAPPVLVRDGGVIA  428

Query  472  PSFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEK  531
            P +   L E R + +     +    I      GLD    +K+  +A  GYY +++  +  
Sbjct  429  PGYHEELDEWRALADGATDYLDRLEIRERERTGLDT---LKVGYNAVHGYYIQISRGQSH  485

Query  532  VLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEP  591
            +   N  +      KN  ++   +L    ++   +K +    +  +  E+ ++   ++  
Sbjct  486  LAPIN--YVRRQTLKNAERYIIPELKEYEDKVLTSKGKALALEKQLYDELFDLLLPHLAD  543

Query  592  MQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFI  651
            +Q   + LA+LD +V+ A       + Y  P   +K   RI     RH  VE      FI
Sbjct  544  LQQSANALAELDVLVNLAE--RAWTLNYTCPTFTDKPGIRIT--EGRHPVVEQVLNEPFI  599

Query  652  PNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILAR  711
             N +     ++M  IITGPNMGGKSTY+RQT +I L+A IG +VP ++ E+  +D I  R
Sbjct  600  ANPLNLSPQRRML-IITGPNMGGKSTYMRQTALIALLAYIGSYVPAQNVEIGPIDRIFTR  658

Query  712  VGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIA  771
            VGA D    G STFM EM ETA+IL +AT++SL+++DE+GRGTSTYDG  LAWA +E +A
Sbjct  659  VGAADDLASGRSTFMVEMTETANILHNATENSLVLMDEIGRGTSTYDGLSLAWACAENLA  718

Query  772  TKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVA  831
             KI A  +FATH+ ELT L  ++  V N+H+ AL   +T+  ++ V+ G   +S+G+ VA
Sbjct  719  NKIKALTLFATHYFELTQLPEKMEGVANVHLDALEHGDTIAFMHSVQDGAASKSYGLAVA  778

Query  832  ELANFPKHVIECAKQKALELE  852
             LA  PK VI+ A+QK  ELE
Sbjct  779  ALAGVPKEVIKRARQKLRELE  799


>gi|58336745|ref|YP_193330.1|  DNA mismatch repair protein [Lactobacillus acidophilus NCFM]
Length=856

 Score =  253 bits (646),  Expect = 2e-65
 Identities = 187/586 (31%), Positives = 289/586 (49%), Gaps = 39/586 (6%)

Query  293  TFDFSQYMKLDIAAVRALNLFQGSVEDTTGSQ--SLAALLNKCKTPQGQRLVNQWIKQPL  350
            +++ +QY+++       L L   +    TG +  SL  +L+K  T  G RL+ QW+ +PL
Sbjct  239  SYEVNQYLQMSHTVQNNLELVASA---KTGKKMGSLFWVLDKTHTAMGGRLLKQWLARPL  295

Query  351  MDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQG  410
            ++ + I  R  +V+A  +    R+    D L+   DL RL  +      N ++  +L + 
Sbjct  296  LNVDEINHREEMVQALFDGYFTRENAI-DALKGVYDLERLTGRIAFGNVNARELLQLSRS  354

Query  411  INQLPNVIQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQ--VENHEF  468
            +  +P ++ AL++ +      +L  F   +  L+       E+I TT+  D   +     
Sbjct  355  LEAVPTILDALDQSDSD----VLKEFAQKIDPLKG----VAELITTTIVKDPPLLTTEGG  406

Query  469  LVKPSFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCK  528
            L++   D  L   R+ MN+ +K +        +  G++    +K+  +  FGYY +V+  
Sbjct  407  LIREGVDKQLDRYRDAMNNGKKWLAQMEADERQKTGIE---NLKVGYNKVFGYYIQVS--  461

Query  529  EEKVLRNNKNFSTVDIQKNGVKFTNSK---LTSLneeytknkteyeeAQDAIVKEIVNIS  585
                   NKN   +D        TN++      L E           + D      V + 
Sbjct  462  -----NGNKNKVPLDRYTRKQTLTNAERYITPELKEHENLILEAQTRSTDLEYDLFVRLR  516

Query  586  SG---YVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACV  642
                 Y+  +Q L   LA LD    FA V+      Y RP+     Q   ++   RH  V
Sbjct  517  EEVKKYIPALQKLGSQLAALDVFCGFASVAEQNN--YCRPSFHTDNQDIDVVNG-RHPVV  573

Query  643  E-VQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAE  701
            E V    ++IPN V  +    ++ +ITGPNM GKSTY+RQ  +I +MAQ+G FVP +SA+
Sbjct  574  EKVMTAGSYIPNSVEMDSSTNIY-LITGPNMSGKSTYMRQMALIAIMAQVGSFVPADSAD  632

Query  702  VSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFG  761
            + I D I  R+GA D  + G STFM EM E    L+ ATK SL++ DE+GRGT+TYDG  
Sbjct  633  LPIFDQIFTRIGAADDLISGQSTFMVEMSEANDALQYATKRSLVLFDEIGRGTATYDGMA  692

Query  762  LAWAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGV  821
            LA AI +Y+  K+GA   FATH+HELT L   +  + N+HV A      L  L+++  G 
Sbjct  693  LAGAIVKYLHDKVGAKAFFATHYHELTDLDETLDHLKNIHVGATEENGKLIFLHKILPGP  752

Query  822  CDQSFGIHVAELANFPKHVIECAKQ--KALELEEFQYIGESQGYDI  865
             DQS+GIHVA+LA  PK V+  A +  K LE +  +    SQ  D+
Sbjct  753  ADQSYGIHVAQLAGLPKSVLREATKLLKRLEAQGSEIAPASQQLDL  798


>gi|16766215|ref|NP_461830.1|  DNA mismatch repair protein [Salmonella typhimurium LT2]
 gi|16761683|ref|NP_457300.1|  DNA mismatch repair protein [Salmonella enterica subsp. enterica 
serovar Typhi str. CT18]
 gi|29143167|ref|NP_806509.1|  DNA mismatch repair protein [Salmonella enterica subsp. enterica 
serovar Typhi Ty2]
 gi|62181411|ref|YP_217828.1|  DNA mismatch repair protein [Salmonella enterica subsp. enterica 
serovar Choleraesuis str. SC-B67]
Length=855

 Score =  253 bits (646),  Expect = 2e-65
 Identities = 183/558 (32%), Positives = 289/558 (51%), Gaps = 36/558 (6%)

Query  302  LDIAAVRALNLFQ---GSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEE  358
            +D A  R L + Q   G VE+T     LAA+L+   TP G R++ +W+  P+ + + + E
Sbjct  271  MDAATRRNLEITQNLAGGVENT-----LAAVLDCTVTPMGSRMLKRWLHMPVRNTDILRE  325

Query  359  RLNLVEAFVEDAELRQTLQE--DLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPN  416
            R   + A      L+ T+ E   +LR+  DL R+  +   + A  +D  R+     QLP 
Sbjct  326  RQQTIGA------LQDTVSELQPVLRQVGDLERILARLALRTARPRDLARMRHAFQQLPE  379

Query  417  VIQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTL-DMDQVENHEF-LVKPSF  474
            +   LE  +           V  L     DF++ ++++E  + D   V   +  ++ P +
Sbjct  380  LHAQLETVDSAP--------VQALRKKMGDFAELRDLLERAIIDAPPVLVRDGGVIAPGY  431

Query  475  DPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLR  534
               L E R + +     +    I      GLD    +K+  +A  GYY +++  +  +  
Sbjct  432  HEELDEWRALADGATDYLDRLEIRERERTGLDT---LKVGYNAVHGYYIQISRGQSHLAP  488

Query  535  NNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQT  594
             N  +      KN  ++   +L    ++   +K +    +  +  E+ ++   ++  +Q 
Sbjct  489  IN--YVRRQTLKNAERYIIPELKEYEDKVLTSKGKALALEKQLYDELFDLLLPHLADLQQ  546

Query  595  LNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPND  654
              + LA+LD +V+ A       + Y  P   +K   RI     RH  VE      FI N 
Sbjct  547  SANALAELDVLVNLAE--RAWTLNYTCPTFTDKPGIRIT--EGRHPVVEQVLNEPFIANP  602

Query  655  VYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGA  714
            +     ++M  IITGPNMGGKSTY+RQT +I L+A IG +VP ++ E+  +D I  RVGA
Sbjct  603  LNLSPQRRML-IITGPNMGGKSTYMRQTALIALLAYIGSYVPAQNVEIGPIDRIFTRVGA  661

Query  715  GDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKI  774
             D    G STFM EM ETA+IL +AT++SL+++DE+GRGTSTYDG  LAWA +E +A KI
Sbjct  662  ADDLASGRSTFMVEMTETANILHNATENSLVLMDEIGRGTSTYDGLSLAWACAENLANKI  721

Query  775  GAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELA  834
             A  +FATH+ ELT L  ++  V N+H+ AL   +T+  ++ V+ G   +S+G+ VA LA
Sbjct  722  KALTLFATHYFELTQLPEKMEGVANVHLDALEHGDTIAFMHSVQDGAASKSYGLAVAALA  781

Query  835  NFPKHVIECAKQKALELE  852
              PK VI+ A+QK  ELE
Sbjct  782  GVPKEVIKRARQKLRELE  799


>gi|32474719|ref|NP_867713.1|  DNA mismatch repair protein [Rhodopirellula baltica SH 1]
Length=891

 Score =  253 bits (646),  Expect = 2e-65
 Identities = 191/603 (31%), Positives = 304/603 (50%), Gaps = 36/603 (5%)

Query  260  EMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLFQGSVED  319
            E    VA+ +  AV+ +L+     S      LT  + S  +++D A  R+L + +     
Sbjct  239  EDNGDVAIRAAGAVLCYLKETQRGSLDHFRSLTCHNRSPVLQIDAATRRSLEITRTM---  295

Query  320  TTGSQ--SLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQ  377
             TGS+  +L  ++++  TP G R++   +  PL+D + I  R + V+ FV +  LR  ++
Sbjct  296  RTGSREGALLGVIDRTVTPMGSRMLADHLAAPLIDADAITYRTDAVDEFVRNNNLRSDIR  355

Query  378  EDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVFV  437
              L   + DL RL  +        +D  ++   ++ LP +   L + +            
Sbjct  356  TVLGDTY-DLTRLLARVATGRTGPRDLRQIAVTLSGLPALKARLAERDS-----------  403

Query  438  TPLTDLRSDFS---KFQEMIETTLDMD---QVENHEFLVKPSFDPNLSELREIMNDLEKK  491
              LT L S+     + +E +E+ L+ +      +  F ++  FD  L  LRE+    ++ 
Sbjct  404  ACLTRLESELHLCPELREQLESALNDECPLSAADGNF-IREGFDSELDTLRELARGGKRW  462

Query  492  MQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVT-CKEEKVLRNNKNFSTVDIQKNGVK  550
            +         + G+     +K+  +  FGYY  V+   ++K+     +F      KN  +
Sbjct  463  IAEYQQRQMDETGI---ANLKVGYNRVFGYYLEVSNAHKDKI---PADFIRKQTLKNCER  516

Query  551  FTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAH  610
            +   +L    E+      +    +  +   +   +  ++  +Q + + +A  D V S A 
Sbjct  517  YITPELKEYEEKVLAADEKASSREQMLFTLLRENTHKHLAILQEVANAIAMTDVVASLAE  576

Query  611  VSNGAPVPYVRPAILEKGQGRIILKASRHACVEV-QDEIAFIPNDVYFEKDKQMFHIITG  669
            V+  A   +VRP + +    RI  +  RH  ++V   +  F+PND     +  M  +ITG
Sbjct  577  VA--AQHHWVRPTLTDDSVLRI--EGGRHPVLDVTMAQGEFVPNDCIQSPETGMILLITG  632

Query  670  PNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEM  729
            PNM GKSTYIRQ  +I L+AQ G FVP  SAE+ I D I ARVGA D   +G STFM EM
Sbjct  633  PNMAGKSTYIRQVALITLLAQTGSFVPATSAEIGIADRIFARVGASDELSRGQSTFMVEM  692

Query  730  LETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTA  789
            +ETA IL +AT  SL+I+DE+GRGTSTYDG  LAWAI+E++  +IGA  +FATH+HEL A
Sbjct  693  VETARILNTATSRSLVILDEIGRGTSTYDGLSLAWAITEHLHEQIGARTLFATHYHELAA  752

Query  790  LANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKAL  849
            L   +P V NL V     ++ +  L+++  G  D+S+GI VA LA  P  V E AK    
Sbjct  753  LQETLPRVANLSVAVKEWQDEVVFLHRIVPGSADKSYGIQVARLAGIPVEVNERAKDVLA  812

Query  850  ELE  852
            +LE
Sbjct  813  QLE  815


>gi|45201212|ref|NP_986782.1|  AGR116Wp [Eremothecium gossypii]
Length=1167

 Score =  253 bits (645),  Expect = 3e-65
 Identities = 233/901 (25%), Positives = 411/901 (45%), Gaps = 90/901 (9%)

Query  8     TLQLESAAEVGFVRF---FQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVI  64
             TL + + A   F  F   +  +  K    +  F +G F+  + +DA LA  ++F     +
Sbjct  229   TLHIPAQAWARFTPFEKQYWQIKSKMWDCIVFFKKGKFFELYEKDAHLA-NQLFD----L  283

Query  65    KYMGPAGAKNLQSVVLSKMNFESFVKDLLLVRQYRVEVYK-----------NRAGNKASK  113
             K  G  G  N+Q   + +M+F+ +    +   Q+  +V K            R GNK   
Sbjct  284   KIAG-GGRANMQLAGIPEMSFDYWASQFI---QHGYKVAKVDQKESMLAKEMREGNKGIV  339

Query  114   ENDWYLAYKASPGNLSQFEDILFGNNDMSASIGVVGVKMSAVDGQRQV-----------G  162
             E +  L    S G L+  + +    +    SI    + + A++    V           G
Sbjct  340   ERE--LQCVLSGGTLTDLKMLHSDQSTYCLSIHEAPLALYAMERGEAVPPEAQQQGRLFG  397

Query  163   VGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQIIQRGGI  222
               ++D+   ++ L EF D+ + + L+ L+ Q+ PKE V+     +    K+ +   +   
Sbjct  398   TAFIDTATGRICLLEFEDDSECTQLDTLMAQVRPKEVVMEKRNLSVIAHKIVKFNSQPDC  457

Query  223   LITERKKADFSTKDIYQDLNRLLKGKKGEQMNS--AVLPEMENQ---VAVSSLSAVIKFL  277
             +   R  A+F   D  +  + +  G     M+S  A+L +  +Q   V  S+   ++ +L
Sbjct  458   IFNYRTSAEFY--DYARTFDEVSNGGYFAGMDSWPAILKQYYDQGKKVGFSAFGGLLSYL  515

Query  278   ELLSDDSNFGQF----ELTTFDFSQYMKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKC  333
             + L  D +        E         + LD   ++ L +F  S  D T   +L  L+N+ 
Sbjct  516   QWLKLDKSLLSMGMVEEYNPLKAQTSLVLDGITLQNLEIFANSF-DGTDKGTLFKLVNRA  574

Query  334   KTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKK  393
              TP G+R +  W+  PL+ K  IEERL+ V+  + +  +R  L E  L   PDL RL  +
Sbjct  575   ITPMGKRQMRTWVMHPLLRKEHIEERLDSVDQLLNEMPIRD-LWESSLTGLPDLERLLAR  633

Query  394   FQRQAANLQDCYRLYQGINQLPNVIQALEKHE--GKHQKLLLAVFVTPLTDLRSDFSKFQ  451
                    ++D  ++  G   +  +I +L ++E  G   + L  +  T    L+SD   + 
Sbjct  634   VHSGNLPIKDFDKVICGFENIVRLISSLNEYELSGSLSRFLHDIPST----LKSDVESWT  689

Query  452   EMIETTLDMDQ---VENHEFLVKPSFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPG  508
              + +  + + +   V N    V+P FD +LS++R     LE+++ + L    R       
Sbjct  690   TLYDRNMAVSEGKVVPNAG--VEPDFDVSLSKMRA----LEEELDAVLSEYKRSFKCS--  741

Query  509   KQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkt  568
              +I+   S +  Y   +     K + +N  ++ +   K+  ++ + K+  L     + + 
Sbjct  742   -KIQYKDSGKELYTIELPISIAKSVPSN--WTQLGANKSTKRYYSPKVQKLARSMAEARE  798

Query  569   eyeeAQDAIVKEIV-----NISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPA  623
              ++  ++ +   +      N S+ +   ++ ++++    D ++S A  S     P  RP 
Sbjct  799   LHKILEEGLKGRLYQKFDQNFSTTWFPTIKAISNI----DCILSLARTSESLGFPACRPN  854

Query  624   ILE--------KGQGRIILKASRHACVE--VQDEIAFIPNDVYFEKDKQMFHIITGPNMG  673
               +        K  G +  K  RH C    V     FIPNDV+  K      ++TG N  
Sbjct  855   FKDEIDPTTGHKLNGYLSFKELRHPCYNAGVNGATEFIPNDVHLGKSTAQIALLTGANAA  914

Query  674   GKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETA  733
             GKST +R T + V+MAQ+GC+VPCE AE+S +D I+ R+GA D+ ++G STF  E+ ET 
Sbjct  915   GKSTILRMTCIAVIMAQLGCYVPCEDAELSPMDRIMTRLGANDNIMQGKSTFFVELSETR  974

Query  734   SILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQ  793
              IL  AT  +LI++DELGRG S+ DGF +A  +  +I+T + +   FATH+  L      
Sbjct  975   KILDMATNRTLIVLDELGRGGSSSDGFAIAEGVLHHISTHVQSLGFFATHYGTLGQSFTH  1034

Query  794   IPTVNNLH--VtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALEL  851
              P V  L   +      + +T LY++ +G  + SFG+HVA +   P+ V+E A++ A   
Sbjct  1035  HPMVKPLQMAILVDEGSKKVTFLYKLIEGQSEGSFGMHVAAMCGIPRSVVENAERAAESF  1094

Query  852   E  852
             E
Sbjct  1095  E  1095


>gi|15832843|ref|NP_311616.1|  DNA mismatch repair protein [Escherichia coli O157:H7]
Length=853

 Score =  253 bits (645),  Expect = 3e-65
 Identities = 184/561 (32%), Positives = 287/561 (51%), Gaps = 42/561 (7%)

Query  302  LDIAAVRALNLFQ---GSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEE  358
            +D A  R L + Q   G  E+T     LA++L+   TP G R++ +W+  P+ D   + E
Sbjct  269  MDAATRRNLEITQNLAGGAENT-----LASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLE  323

Query  359  RLNLVEAFVE-DAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNV  417
            R   + A  +  AEL     + +LR+  DL R+  +   + A  +D  R+     QLP +
Sbjct  324  RQQTIGALQDFTAEL-----QPVLRQVGDLERILARLALRTARPRDLARMRHAFQQLPEL  378

Query  418  IQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPS----  473
               LE            V   P+  LR    +F E+ +  L+   ++    LV+      
Sbjct  379  RAQLE-----------TVDSAPVQALREKMGEFAELRDL-LERAIIDTPPVLVRDGGVIA  426

Query  474  --FDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEK  531
              ++  L E R + +     ++   +      GLD    +K+  +A  GYY +++  +  
Sbjct  427  SGYNEELDEWRALADGATDYLERLEVRERERTGLDT---LKVGFNAVHGYYIQISRGQSH  483

Query  532  VLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEP  591
            +   N  +      KN  ++   +L    ++   +K +    +  + +E+ ++   ++E 
Sbjct  484  LAPIN--YMRRQTLKNAERYIIPELKEYEDKVLTSKGKALALEKQLYEELFDLLLPHLEA  541

Query  592  MQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFI  651
            +Q     LA+LD +V+ A       + Y  P  ++K   RI     RH  VE      FI
Sbjct  542  LQQSASALAELDVLVNLAE--RAYTLNYTCPTFIDKPGIRIT--EGRHPVVEQVLNEPFI  597

Query  652  PNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILAR  711
             N +     ++M  IITGPNMGGKSTY+RQT +I LMA IG +VP +  E+  +D I  R
Sbjct  598  ANPLNLSPQRRML-IITGPNMGGKSTYMRQTALIALMAYIGSYVPAQKVEIGPIDRIFTR  656

Query  712  VGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIA  771
            VGA D    G STFM EM ETA+IL +AT+ SL+++DE+GRGTSTYDG  LAWA +E +A
Sbjct  657  VGAADDLASGRSTFMVEMTETANILHNATEYSLVLMDEIGRGTSTYDGLSLAWACAENLA  716

Query  772  TKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVA  831
             KI A  +FATH+ ELT L  ++  V N+H+ AL   +T+  ++ V+ G   +S+G+ VA
Sbjct  717  NKIKALTLFATHYFELTQLPEKMEGVANVHLDALEHGDTIAFMHSVQDGAASKSYGLAVA  776

Query  832  ELANFPKHVIECAKQKALELE  852
             LA  PK VI+ A+QK  ELE
Sbjct  777  ALAGVPKEVIKRARQKLRELE  797


>gi|24114026|ref|NP_708536.1|  DNA mismatch repair protein [Shigella flexneri 2a str. 301]
 gi|30064089|ref|NP_838260.1|  DNA mismatch repair protein [Shigella flexneri 2a str. 2457T]
Length=853

 Score =  253 bits (645),  Expect = 3e-65
 Identities = 184/561 (32%), Positives = 287/561 (51%), Gaps = 42/561 (7%)

Query  302  LDIAAVRALNLFQ---GSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEE  358
            +D A  R L + Q   G  E+T     LA++L+   TP G R++ +W+  P+ D   + E
Sbjct  269  MDAATRRNLEITQNLAGGAENT-----LASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLE  323

Query  359  RLNLVEAFVE-DAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNV  417
            R   + A  +  AEL     + +LR+  DL R+  +   + A  +D  R+     QLP +
Sbjct  324  RQQTIGALQDFTAEL-----QPVLRQVGDLERILARLALRTARPRDLARMRHAFQQLPEL  378

Query  418  IQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPS----  473
               LE            V   P+  LR    +F E+ +  L+   ++    LV+      
Sbjct  379  RAQLE-----------TVDSAPVQALREKMGEFAELRDL-LERAIIDTPPVLVRDGGVIA  426

Query  474  --FDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEK  531
              ++  L E R + +     ++   +      GLD    +K+  +A  GYY +++  +  
Sbjct  427  SGYNEELDEWRALADGATDYLERLEVRERERTGLDT---LKVGFNAVHGYYIQISRGQSH  483

Query  532  VLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEP  591
            +   N  +      KN  ++   +L    ++   +K +    +  + +E+ ++   ++E 
Sbjct  484  LAPIN--YMRRQTLKNAERYIIPELKEYEDKVLTSKGKALALEKQLYEELFDLLLPHLEA  541

Query  592  MQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFI  651
            +Q     LA+LD +V+ A       + Y  P  ++K   RI     RH  VE      FI
Sbjct  542  LQQSASALAELDVLVNLAE--RAYTLNYTCPTFIDKPGIRIT--EGRHPVVEQVLNEPFI  597

Query  652  PNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILAR  711
             N +     ++M  IITGPNMGGKSTY+RQT +I LMA IG +VP +  E+  +D I  R
Sbjct  598  ANPLNLSPQRRML-IITGPNMGGKSTYMRQTALIALMAYIGSYVPAQKVEIGPIDRIFTR  656

Query  712  VGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIA  771
            VGA D    G STFM EM ETA+IL +AT+ SL+++DE+GRGTSTYDG  LAWA +E +A
Sbjct  657  VGAADDLASGRSTFMVEMTETANILHNATEYSLVLMDEIGRGTSTYDGLSLAWACAENLA  716

Query  772  TKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVA  831
             KI A  +FATH+ ELT L  ++  V N+H+ AL   +T+  ++ V+ G   +S+G+ VA
Sbjct  717  NKIKALTLFATHYFELTQLPEKMEGVANVHLDALEHGDTIAFMHSVQDGAASKSYGLAVA  776

Query  832  ELANFPKHVIECAKQKALELE  852
             LA  PK VI+ A+QK  ELE
Sbjct  777  ALAGVPKEVIKRARQKLRELE  797


>gi|91212095|ref|YP_542081.1|  DNA mismatch repair protein MutS [Escherichia coli UTI89]
Length=853

 Score =  253 bits (645),  Expect = 3e-65
 Identities = 181/561 (32%), Positives = 289/561 (51%), Gaps = 42/561 (7%)

Query  302  LDIAAVRALNLFQ---GSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEE  358
            +D A  R L + Q   G  E+T     LA++L+   TP G R++ +W+  P+ D   + E
Sbjct  269  MDAATRRNLEITQNLAGGAENT-----LASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLE  323

Query  359  RLNLVEAFVE-DAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNV  417
            R   + A  +  AEL     + +LR+  DL R+  +   + A  +D  R+     QLP +
Sbjct  324  RQQTIGALQDFTAEL-----QPVLRQVGDLERILARLALRTARPRDLARMRHAFQQLPEL  378

Query  418  IQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPS----  473
               LE  +           V  L +   +F++ ++++E  +    ++    LV+      
Sbjct  379  RAQLENVDSAP--------VQALREKMGEFAELRDLLERAI----IDTPPVLVRDGGVIA  426

Query  474  --FDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEK  531
              ++  L E R + +     ++   +      GLD    +K+  +A  GYY +++  +  
Sbjct  427  TGYNEELDEWRALADGATDYLERLEVRERERTGLDT---LKVGFNAVHGYYIQISRGQSH  483

Query  532  VLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEP  591
            +   N  +      KN  ++   +L    ++   +K +    +  + +E+ ++   ++E 
Sbjct  484  LAPIN--YMRRQTLKNAERYIIPELKEYEDKVLTSKGKALALEKQLYEELFDLLLPHLEA  541

Query  592  MQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFI  651
            +Q     LA+LD +V+ A       + Y  P  ++K   RI     RH  VE      FI
Sbjct  542  LQQSASALAELDVLVNLAE--RAYTLNYTCPTFIDKPGIRIT--EGRHPVVEQVLNEPFI  597

Query  652  PNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILAR  711
             N +     ++M  IITGPNMGGKSTY+RQT +I LMA IG +VP +  E+  +D I  R
Sbjct  598  ANPLNLSPQRRML-IITGPNMGGKSTYMRQTALIALMAYIGSYVPAQKVEIGPIDRIFTR  656

Query  712  VGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIA  771
            VGA D    G STFM EM ETA+IL +AT+ SL+++DE+GRGTSTYDG  LAWA +E +A
Sbjct  657  VGAADDLASGRSTFMVEMTETANILHNATEYSLVLMDEIGRGTSTYDGLSLAWACAENLA  716

Query  772  TKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVA  831
             KI A  +FATH+ ELT L  ++  V N+H+ AL   +T+  ++ V+ G   +S+G+ VA
Sbjct  717  NKIKALTLFATHYFELTQLPEKMEGVANVHLDALEHGDTIAFMHSVQDGAASKSYGLAVA  776

Query  832  ELANFPKHVIECAKQKALELE  852
             LA  PK VI+ A+QK  ELE
Sbjct  777  ALAGVPKEVIKRARQKLRELE  797


>gi|26249133|ref|NP_755173.1|  DNA mismatch repair protein [Escherichia coli CFT073]
Length=853

 Score =  253 bits (645),  Expect = 3e-65
 Identities = 181/561 (32%), Positives = 289/561 (51%), Gaps = 42/561 (7%)

Query  302  LDIAAVRALNLFQ---GSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEE  358
            +D A  R L + Q   G  E+T     LA++L+   TP G R++ +W+  P+ D   + E
Sbjct  269  MDAATRRNLEITQNLAGGAENT-----LASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLE  323

Query  359  RLNLVEAFVE-DAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNV  417
            R   + A  +  AEL     + +LR+  DL R+  +   + A  +D  R+     QLP +
Sbjct  324  RQQTIGALQDFTAEL-----QPVLRQVGDLERILARLALRTARPRDLARMRHAFQQLPEL  378

Query  418  IQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPS----  473
               LE  +           V  L +   +F++ ++++E  +    ++    LV+      
Sbjct  379  RAQLENVDSAP--------VQALREKMGEFAELRDLLERAI----IDTPPVLVRDGGVIA  426

Query  474  --FDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEK  531
              ++  L E R + +     ++   +      GLD    +K+  +A  GYY +++  +  
Sbjct  427  SGYNEELDEWRALADGATDYLERLEVRERERTGLDT---LKVGFNAVHGYYIQISRGQSH  483

Query  532  VLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEP  591
            +   N  +      KN  ++   +L    ++   +K +    +  + +E+ ++   ++E 
Sbjct  484  LAPIN--YMRRQTLKNAERYIIPELKEYEDKVLTSKGKALALEKQLYEELFDLLLPHLEA  541

Query  592  MQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFI  651
            +Q     LA+LD +V+ A       + Y  P  ++K   RI     RH  VE      FI
Sbjct  542  LQQSASALAELDVLVNLAE--RAYTLNYTCPTFIDKPGIRIT--EGRHPVVEQVLNEPFI  597

Query  652  PNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILAR  711
             N +     ++M  IITGPNMGGKSTY+RQT +I LMA IG +VP +  E+  +D I  R
Sbjct  598  ANPLNLSPQRRML-IITGPNMGGKSTYMRQTALIALMAYIGSYVPAQKVEIGPIDRIFTR  656

Query  712  VGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIA  771
            VGA D    G STFM EM ETA+IL +AT+ SL+++DE+GRGTSTYDG  LAWA +E +A
Sbjct  657  VGAADDLASGRSTFMVEMTETANILHNATEYSLVLMDEIGRGTSTYDGLSLAWACAENLA  716

Query  772  TKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVA  831
             KI A  +FATH+ ELT L  ++  V N+H+ AL   +T+  ++ V+ G   +S+G+ VA
Sbjct  717  NKIKALTLFATHYFELTQLPEKMEGVANVHLDALEHGDTIAFMHSVQDGAASKSYGLAVA  776

Query  832  ELANFPKHVIECAKQKALELE  852
             LA  PK VI+ A+QK  ELE
Sbjct  777  ALAGVPKEVIKRARQKLRELE  797


>gi|77919111|ref|YP_356926.1|  DNA mismatch repair protein MutS [Pelobacter carbinolicus DSM 
2380]
Length=870

 Score =  253 bits (645),  Expect = 3e-65
 Identities = 193/614 (31%), Positives = 299/614 (48%), Gaps = 25/614 (4%)

Query  251  EQMNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRAL  310
            E    A LPE     AV +   V+ ++E            L T+    YM LD +  R L
Sbjct  223  ESFGCARLPE-----AVRAAGGVVYYVEQTQKGVAGHIRPLVTYHSRDYMVLDNSTRRNL  277

Query  311  NLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDA  370
             L   +++D     SL  +L++  T  G R + QWI  PL+D   I +R   V+  V  +
Sbjct  278  EL-TATLQDGGRKGSLLGVLDRTVTAMGGRKIRQWIHHPLVDLKAIRDRHLSVQELVGQS  336

Query  371  ELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQK  430
             +R  L+ DL   + DL RL  K     AN +D   L +   +LP ++Q L++       
Sbjct  337  LVRGDLRADLDGVY-DLERLNSKIAMGHANAKDLVALRKSFEKLPRILQHLDELSAP-LA  394

Query  431  LLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIMNDLEK  490
              +   + PLTD+     +   ++E   D   V     L+   +   L ELR+I  + ++
Sbjct  395  AGIGSRIDPLTDMAELIGR--AIVE---DPPFVLREGGLMCDGYHLELDELRDIRRNGKE  449

Query  491  KMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVK  550
             +           G+     +K+  +  FGYY  VT     + R  +++       N  +
Sbjct  450  WIAKLEADERERTGIG---SLKVRFNKVFGYYIEVT--RTHLGRVPEDYQRKQTLANAER  504

Query  551  FTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAH  610
            F   +L    E+    +    + +  + +++    +   E +Q   + LA+LD ++S A 
Sbjct  505  FFTPQLKEYEEKVLGAEDRLFDLEFELFQDLRERVAEQGERVQRTAEALAELDVLLSLAD  564

Query  611  VSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQD-EIAFIPNDVYFEKDKQMFHIITG  669
            V++     YV P + +    R++++  RH  +E  +    F+PNDV  +  +    +ITG
Sbjct  565  VAHSCD--YVCPTMDDSD--RLVIRDGRHPVIEAMNLGEHFVPNDVEMDCRENQIMVITG  620

Query  670  PNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEM  729
            PNM GKSTY+RQ  +I LMA +G  VP  SA + +VD I  RVGA D+  +G STFM EM
Sbjct  621  PNMAGKSTYMRQVALITLMAHMGSLVPAASAHIGLVDRIFTRVGASDNLAQGQSTFMVEM  680

Query  730  LETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATK--IGAFCMFATHFHEL  787
             E A IL  AT  SLI++DE+GRGTST+DG  +AWA++EY+     + A  +FATH+HEL
Sbjct  681  TEAAHILNHATSRSLIVLDEIGRGTSTFDGISIAWAVAEYLHDNGHVAAKTLFATHYHEL  740

Query  788  TALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQK  847
            T L      V NL++      E +  L ++ KG    S+GI VA LA  P  VI+ AK+ 
Sbjct  741  TDLILTCERVKNLNIAVREWNEQIIFLRKIVKGPASHSYGIQVARLAGLPVAVIDRAKEI  800

Query  848  ALELEEFQYIGESQ  861
             + LE  +   E Q
Sbjct  801  LVNLESGELAEEGQ  814


>gi|74313299|ref|YP_311718.1|  methyl-directed mismatch repair [Shigella sonnei Ss046]
Length=853

 Score =  253 bits (645),  Expect = 3e-65
 Identities = 184/561 (32%), Positives = 287/561 (51%), Gaps = 42/561 (7%)

Query  302  LDIAAVRALNLFQ---GSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEE  358
            +D A  R L + Q   G  E+T     LA++L+   TP G R++ +W+  P+ D   + E
Sbjct  269  MDAATRRNLEITQNLAGGAENT-----LASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLE  323

Query  359  RLNLVEAFVE-DAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNV  417
            R   + A  +  AEL     + +LR+  DL R+  +   + A  +D  R+     QLP +
Sbjct  324  RQQTIGALQDFTAEL-----QPVLRQVGDLERILARLALRTARPRDLARMRHAFQQLPEL  378

Query  418  IQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPS----  473
               LE            V   P+  LR    +F E+ +  L+   ++    LV+      
Sbjct  379  RAQLE-----------TVDSAPVQALREKMGEFAELRDL-LERAIIDTPPVLVRDGGVIA  426

Query  474  --FDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEK  531
              ++  L E R + +     ++   +      GLD    +K+  +A  GYY +++  +  
Sbjct  427  SGYNEELDEWRALADGATDYLERLEVRERERTGLDT---LKVGFNAVHGYYIQISRGQSH  483

Query  532  VLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEP  591
            +   N  +      KN  ++   +L    ++   +K +    +  + +E+ ++   ++E 
Sbjct  484  LAPIN--YMRRQTLKNAERYIIPELKEYEDKVLTSKGKALALEKQLYEELFDLLLPHLEA  541

Query  592  MQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFI  651
            +Q     LA+LD +V+ A       + Y  P  ++K   RI     RH  VE      FI
Sbjct  542  LQQSASALAELDVLVNLAE--RAYTLNYTCPTFIDKPGIRIT--EGRHPVVEQVLNEPFI  597

Query  652  PNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILAR  711
             N +     ++M  IITGPNMGGKSTY+RQT +I LMA IG +VP +  E+  +D I  R
Sbjct  598  ANPLNLSPQRRML-IITGPNMGGKSTYMRQTALIALMAYIGSYVPAQKVEIGPIDRIFTR  656

Query  712  VGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIA  771
            VGA D    G STFM EM ETA+IL +AT+ SL+++DE+GRGTSTYDG  LAWA +E +A
Sbjct  657  VGAADDLASGRSTFMVEMTETANILHNATEYSLVLMDEIGRGTSTYDGLSLAWACAENLA  716

Query  772  TKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVA  831
             KI A  +FATH+ ELT L  ++  V N+H+ AL   +T+  ++ V+ G   +S+G+ VA
Sbjct  717  NKIKALTLFATHYFELTQLPEKMEGVANVHLDALEHGDTIAFMHSVQDGAASKSYGLAVA  776

Query  832  ELANFPKHVIECAKQKALELE  852
             LA  PK VI+ A+QK  ELE
Sbjct  777  ALAGVPKEVIKRARQKLRELE  797


>gi|27904861|ref|NP_777987.1|  DNA mismatch repair protein [Buchnera aphidicola str. Bp (Baizongia 
pistaciae)]
Length=800

 Score =  253 bits (645),  Expect = 3e-65
 Identities = 209/823 (25%), Positives = 385/823 (46%), Gaps = 73/823 (8%)

Query  40   GDFYTAHGEDALLAAREVFKTQGVIKYMGPAGAKNLQSVVLSKMNFESFVKDLLLVRQYR  99
            GDFY    +DA    R        +   G +  K +    +   +   ++  LL + +  
Sbjct  36   GDFYELFFDDA---KRISLMLDITLTKRGYSSQKEIPMAGIPYTSLNRYLSKLLKIGESA  92

Query  100  VEVYKNRAGNKASKENDWYLAYKASPGNLSQFEDILFGNNDMSASIGVVGVKMSAVDGQR  159
            V   +    +K +   +  ++   +PG +   E +    N++  S+            ++
Sbjct  93   VICEQTHIIDKRTGLIERKISRVVTPGTVIDEEFLSETKNNLLGSVYY---------SKK  143

Query  160  QVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQIIQR  219
            + G   +D       + E+   D F +  + L +  P+E ++       D   +    +R
Sbjct  144  RFGYATLDLCSGNFYISEY---DTFESFISELQRTDPEELLIQE-----DFLYMNFFEKR  195

Query  220  GGILITERKKADFSTKDIYQDLNRLLKGKKGEQMNSAVLPEMENQVAVSSLSAVIKFLEL  279
             GI +   K  DF+    YQ L    K K     N       +N +A+S+   ++K+L+ 
Sbjct  196  KGIRLC--KLNDFNIDSAYQQLKCHFKTK-----NLKSFGVYQNNLAISAAGCLLKYLKF  248

Query  280  LSDDSNFGQFELTTFDFSQYMKLDIAAV----------RALNLFQGSVEDTTGSQSLAAL  329
            +       Q+ L     S  ++ D   +            +N   G  E T     L ++
Sbjct  249  I-------QYSLLPHVKSIKVRYDCNHIFMNSATRKNLEIINNISGKKEHT-----LLSI  296

Query  330  LNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNR  389
            L+   TP G RL+ +W+  P+ D   I +R N++++ ++   +  +L   LL+   DL R
Sbjct  297  LDNTATPMGGRLLRKWLSAPIKDIKIINKRHNIIKS-LKTVYMSLSL---LLKGIGDLER  352

Query  390  LAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVFVTPLTDLRSDFSK  449
            +  +   ++A+ +D   +   + Q   +I  L   + K  +L+             +++ 
Sbjct  353  IISRIACRSASPKDFVSMRSALLQFSKIIFVLNSTKSKTLELISCKI--------KEYNS  404

Query  450  FQEMIETTLDM--DQVENHEFLVKPSFDPNLSELREIMNDLEKKMQSTLISAARDLGLDP  507
               ++  +L +   +      ++  +++ +L + R+I N+  + +Q   +S  + L +  
Sbjct  405  ILILLRRSLKVCPSKTIKEGNVISENYNKDLDKWRKIANNASEYLQYFEVSERKRLHIT-  463

Query  508  GKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknk  567
               +K++++   GYY +++ K+ K+  NN  +  +   K+ V+++  +L          K
Sbjct  464  --SLKVNNNRVLGYYVQISKKDIKLAPNN--YKKIQTLKHCVRYSTLELLDYENNVNNAK  519

Query  568  teyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEK  627
             +  E ++ +  E+ +    Y++ ++   + +++LD + +         + YV P I + 
Sbjct  520  DKVLEIENYLYNELFDFIIPYIDSLKISVNTISELDVLNNLTE--RACVLNYVCPVISD-  576

Query  628  GQGRIILKASRHACVEVQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVL  687
             +  I+L  SRH  VE   +  F+ N +   K   M  IITGPNMGGKSTY+RQ  +IV+
Sbjct  577  -EYGILLTDSRHPVVENLLKTPFVKNSINLSKSSNML-IITGPNMGGKSTYMRQIALIVI  634

Query  688  MAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIII  747
            MA IG FVP + A + + D I  R+G+ D+   G STFM EM+E +SILR++T +SL++I
Sbjct  635  MAYIGSFVPAKYARIGLCDKIFTRIGSADNLAYGESTFMMEMIEMSSILRNSTSNSLVLI  694

Query  748  DELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltt  807
            DELGRGTS +DG  LAWA  EY+A KI A  +F+TH+ ELT L N    + N++   L  
Sbjct  695  DELGRGTSMHDGLSLAWACIEYLAGKINAMTLFSTHYFELTKLKNYYSNIRNMYFDVLEH  754

Query  808  eetltMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALE  850
               +   Y +K G  ++S+G+ VA LA  PK ++  AK+K  E
Sbjct  755  NNEIVFTYVIKNGFINKSYGLVVAALAKLPKCILLSAKKKLKE  797


>gi|68543405|ref|ZP_00583111.1|  MutS 1 protein [Shewanella baltica OS155]
Length=856

 Score =  253 bits (645),  Expect = 3e-65
 Identities = 179/576 (31%), Positives = 288/576 (50%), Gaps = 34/576 (5%)

Query  291  LTTFDFSQYMKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPL  350
            +T F+ +  + LD A  R L L Q          +LAA+L+   TP G R++ +WI QPL
Sbjct  260  ITRFNQTDSIVLDAATRRNLELTQNLAGGR--DNTLAAVLDNTATPMGSRILQRWIHQPL  317

Query  351  MDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQG  410
             D   I+ R   V   ++ A   + L E L +   D+ R+  +   + A  +D  RL Q 
Sbjct  318  RDPKHIQARQQAVTELLDTAA-HEGLHEQL-KALGDIERIMARLALRTARPRDFARLRQA  375

Query  411  INQLPNVIQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLV  470
            +  LP + ++L      H         T L     +F   Q ++E  +    V+N   L+
Sbjct  376  LGLLPELQKSLSTLSAPH--------TTQLRQHLGEFPAEQALLERAI----VDNPPMLI  423

Query  471  KPS------FDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFR  524
            +        ++  L E R +       +           G++    +K+  +   GYY  
Sbjct  424  RDGGVIREGYNSELDEWRGLSEGASDYLVQLEAREKERTGINT---LKVGYNRVHGYYIE  480

Query  525  VT-CKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVN  583
            V+  +  +V  N +   T+   KN  ++   +L    E+   ++ +    +  + +++ +
Sbjct  481  VSRLQSSQVPLNYQRRQTL---KNMERYITPELKEYEEKVLSSQGKALALEKQLWEQLFD  537

Query  584  ISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVE  643
            +    +  +Q      A+LD + +FA       + Y  P + +     + ++A RH  VE
Sbjct  538  LILPKLHELQAFARAAAELDVLSNFAE--RAETLGYTCPELSQ--DIGVQIEAGRHPVVE  593

Query  644  VQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVS  703
               +  FI N V     ++M  I+TGPNMGGKSTY+RQ  +I LMA IGCFVP   A + 
Sbjct  594  RVSQTPFIANPVTLHNQRRML-IVTGPNMGGKSTYMRQVALITLMAHIGCFVPAGRALIG  652

Query  704  IVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLA  763
             +D I  R+GA D    G STFM EM ETA+IL +AT  SL+++DE+GRGTSTYDG  LA
Sbjct  653  PIDRIFTRIGASDDLASGRSTFMVEMTETANILHNATASSLVLMDEIGRGTSTYDGLSLA  712

Query  764  WAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCD  823
            W+ +EY+A ++GA  +FATH+ ELT L   +  V N+H+ A+  ++T+  ++ V++G   
Sbjct  713  WSAAEYLAQQVGAMTLFATHYFELTQLPELMAGVYNVHLDAIEHDDTIAFMHTVQEGAAS  772

Query  824  QSFGIHVAELANFPKHVIECAKQKALELEEFQYIGE  859
            +S+G+ VA LA  P  VI+ AK K  +LE   +  E
Sbjct  773  KSYGLQVAALAGVPNKVIKAAKHKLQQLESRDHQAE  808


>gi|75512357|ref|ZP_00734909.1|  COG0249: Mismatch repair ATPase (MutS family) [Escherichia coli 
53638]
 gi|75235672|ref|ZP_00719846.1|  COG0249: Mismatch repair ATPase (MutS family) [Escherichia coli 
E110019]
 gi|75230061|ref|ZP_00716571.1|  COG0249: Mismatch repair ATPase (MutS family) [Escherichia coli 
B7A]
Length=841

 Score =  253 bits (645),  Expect = 3e-65
 Identities = 184/561 (32%), Positives = 287/561 (51%), Gaps = 42/561 (7%)

Query  302  LDIAAVRALNLFQ---GSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEE  358
            +D A  R L + Q   G  E+T     LA++L+   TP G R++ +W+  P+ D   + E
Sbjct  257  MDAATRRNLEITQNLAGGAENT-----LASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLE  311

Query  359  RLNLVEAFVE-DAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNV  417
            R   + A  +  AEL     + +LR+  DL R+  +   + A  +D  R+     QLP +
Sbjct  312  RQQTIGALQDFTAEL-----QPVLRQVGDLERILARLALRTARPRDLARMRHAFQQLPEL  366

Query  418  IQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPS----  473
               LE            V   P+  LR    +F E+ +  L+   ++    LV+      
Sbjct  367  RAQLE-----------TVDSAPVQALREKMGEFAELRDL-LERAIIDTPPVLVRDGGVIA  414

Query  474  --FDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEK  531
              ++  L E R + +     ++   +      GLD    +K+  +A  GYY +++  +  
Sbjct  415  SGYNEELDEWRALADGATDYLERLEVRERERTGLDT---LKVGFNAVHGYYIQISRGQSH  471

Query  532  VLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEP  591
            +   N  +      KN  ++   +L    ++   +K +    +  + +E+ ++   ++E 
Sbjct  472  LAPIN--YMRRQTLKNAERYIIPELKEYEDKVLTSKGKALALEKQLYEELFDLLLPHLEA  529

Query  592  MQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFI  651
            +Q     LA+LD +V+ A       + Y  P  ++K   RI     RH  VE      FI
Sbjct  530  LQQSASALAELDVLVNLAE--RAYTLNYTCPTFIDKPGIRIT--EGRHPVVEQVLNEPFI  585

Query  652  PNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILAR  711
             N +     ++M  IITGPNMGGKSTY+RQT +I LMA IG +VP +  E+  +D I  R
Sbjct  586  ANPLNLSPQRRML-IITGPNMGGKSTYMRQTALIALMAYIGSYVPAQKVEIGPIDRIFTR  644

Query  712  VGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIA  771
            VGA D    G STFM EM ETA+IL +AT+ SL+++DE+GRGTSTYDG  LAWA +E +A
Sbjct  645  VGAADDLASGRSTFMVEMTETANILHNATEYSLVLMDEIGRGTSTYDGLSLAWACAENLA  704

Query  772  TKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVA  831
             KI A  +FATH+ ELT L  ++  V N+H+ AL   +T+  ++ V+ G   +S+G+ VA
Sbjct  705  NKIKALTLFATHYFELTQLPEKMEGVANVHLDALEHGDTIAFMHSVQDGAASKSYGLAVA  764

Query  832  ELANFPKHVIECAKQKALELE  852
             LA  PK VI+ A+QK  ELE
Sbjct  765  ALAGVPKEVIKRARQKLRELE  785


>gi|75256935|ref|ZP_00728511.1|  COG0249: Mismatch repair ATPase (MutS family) [Escherichia coli 
E22]
 gi|75210934|ref|ZP_00711058.1|  COG0249: Mismatch repair ATPase (MutS family) [Escherichia coli 
B171]
Length=841

 Score =  253 bits (645),  Expect = 3e-65
 Identities = 184/561 (32%), Positives = 287/561 (51%), Gaps = 42/561 (7%)

Query  302  LDIAAVRALNLFQ---GSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEE  358
            +D A  R L + Q   G  E+T     LA++L+   TP G R++ +W+  P+ D   + E
Sbjct  257  MDAATRRNLEITQNLAGGAENT-----LASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLE  311

Query  359  RLNLVEAFVE-DAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNV  417
            R   + A  +  AEL     + +LR+  DL R+  +   + A  +D  R+     QLP +
Sbjct  312  RQQTIGALQDFTAEL-----QPVLRQVGDLERILARLALRTARPRDLARMRHAFQQLPEL  366

Query  418  IQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPS----  473
               LE            V   P+  LR    +F E+ +  L+   ++    LV+      
Sbjct  367  RAQLE-----------TVDSAPVQALREKMGEFAELRDL-LERAIIDTPPVLVRDGGVIA  414

Query  474  --FDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEK  531
              ++  L E R + +     ++   +      GLD    +K+  +A  GYY +++  +  
Sbjct  415  SGYNEELDEWRALADGATDYLERLEVRERERTGLDT---LKVGFNAVHGYYIQISRGQSH  471

Query  532  VLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEP  591
            +   N  +      KN  ++   +L    ++   +K +    +  + +E+ ++   ++E 
Sbjct  472  LAPIN--YMRRQTLKNAERYIIPELKEYEDKVLTSKGKALALEKQLYEELFDLLLPHLEA  529

Query  592  MQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFI  651
            +Q     LA+LD +V+ A       + Y  P  ++K   RI     RH  VE      FI
Sbjct  530  LQQSASALAELDVLVNLAE--RAYTLNYTCPTFIDKPGIRIT--EGRHPVVEQVLNEPFI  585

Query  652  PNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILAR  711
             N +     ++M  IITGPNMGGKSTY+RQT +I LMA IG +VP +  E+  +D I  R
Sbjct  586  ANPLNLSPQRRML-IITGPNMGGKSTYMRQTALIALMAYIGSYVPAQKVEIGPIDRIFTR  644

Query  712  VGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIA  771
            VGA D    G STFM EM ETA+IL +AT+ SL+++DE+GRGTSTYDG  LAWA +E +A
Sbjct  645  VGAADDLASGRSTFMVEMTETANILHNATEYSLVLMDEIGRGTSTYDGLSLAWACAENLA  704

Query  772  TKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVA  831
             KI A  +FATH+ ELT L  ++  V N+H+ AL   +T+  ++ V+ G   +S+G+ VA
Sbjct  705  NKIKALTLFATHYFELTQLPEKMEGVANVHLDALEHGDTIAFMHSVQDGAASKSYGLAVA  764

Query  832  ELANFPKHVIECAKQKALELE  852
             LA  PK VI+ A+QK  ELE
Sbjct  765  ALAGVPKEVIKRARQKLRELE  785


>gi|75241878|ref|ZP_00725697.1|  COG0249: Mismatch repair ATPase (MutS family) [Escherichia coli 
F11]
Length=841

 Score =  253 bits (645),  Expect = 3e-65
 Identities = 181/561 (32%), Positives = 289/561 (51%), Gaps = 42/561 (7%)

Query  302  LDIAAVRALNLFQ---GSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEE  358
            +D A  R L + Q   G  E+T     LA++L+   TP G R++ +W+  P+ D   + E
Sbjct  257  MDAATRRNLEITQNLAGGAENT-----LASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLE  311

Query  359  RLNLVEAFVE-DAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNV  417
            R   + A  +  AEL     + +LR+  DL R+  +   + A  +D  R+     QLP +
Sbjct  312  RQQTIGALQDFTAEL-----QPVLRQVGDLERILARLALRTARPRDLARMRHAFQQLPEL  366

Query  418  IQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPS----  473
               LE  +           V  L +   +F++ ++++E  +    ++    LV+      
Sbjct  367  RAQLENVDSAP--------VQALREKMGEFAELRDLLERAI----IDTPPVLVRDGGVIA  414

Query  474  --FDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEK  531
              ++  L E R + +     ++   +      GLD    +K+  +A  GYY +++  +  
Sbjct  415  SGYNEELDEWRALADGATDYLERLEVRERERTGLDT---LKVGFNAVHGYYIQISRGQSH  471

Query  532  VLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEP  591
            +   N  +      KN  ++   +L    ++   +K +    +  + +E+ ++   ++E 
Sbjct  472  LAPIN--YMRRQTLKNAERYIIPELKEYEDKVLTSKGKALALEKQLYEELFDLLLPHLEA  529

Query  592  MQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFI  651
            +Q     LA+LD +V+ A       + Y  P  ++K   RI     RH  VE      FI
Sbjct  530  LQQSASALAELDVLVNLAE--RAYTLNYTCPTFIDKPGIRIT--EGRHPVVEQVLNEPFI  585

Query  652  PNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILAR  711
             N +     ++M  IITGPNMGGKSTY+RQT +I LMA IG +VP +  E+  +D I  R
Sbjct  586  ANPLNLSPQRRML-IITGPNMGGKSTYMRQTALIALMAYIGSYVPAQKVEIGPIDRIFTR  644

Query  712  VGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIA  771
            VGA D    G STFM EM ETA+IL +AT+ SL+++DE+GRGTSTYDG  LAWA +E +A
Sbjct  645  VGAADDLASGRSTFMVEMTETANILHNATEYSLVLMDEIGRGTSTYDGLSLAWACAENLA  704

Query  772  TKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVA  831
             KI A  +FATH+ ELT L  ++  V N+H+ AL   +T+  ++ V+ G   +S+G+ VA
Sbjct  705  NKIKALTLFATHYFELTQLPEKMEGVANVHLDALEHGDTIAFMHSVQDGAASKSYGLAVA  764

Query  832  ELANFPKHVIECAKQKALELE  852
             LA  PK VI+ A+QK  ELE
Sbjct  765  ALAGVPKEVIKRARQKLRELE  785


>gi|75187457|ref|ZP_00700724.1|  COG0249: Mismatch repair ATPase (MutS family) [Escherichia coli 
E24377A]
Length=860

 Score =  253 bits (645),  Expect = 3e-65
 Identities = 184/561 (32%), Positives = 287/561 (51%), Gaps = 42/561 (7%)

Query  302  LDIAAVRALNLFQ---GSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEE  358
            +D A  R L + Q   G  E+T     LA++L+   TP G R++ +W+  P+ D   + E
Sbjct  276  MDAATRRNLEITQNLAGGAENT-----LASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLE  330

Query  359  RLNLVEAFVE-DAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNV  417
            R   + A  +  AEL     + +LR+  DL R+  +   + A  +D  R+     QLP +
Sbjct  331  RQQTIGALQDFTAEL-----QPVLRQVGDLERILARLALRTARPRDLARMRHAFQQLPEL  385

Query  418  IQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPS----  473
               LE            V   P+  LR    +F E+ +  L+   ++    LV+      
Sbjct  386  RAQLE-----------TVDSAPVQALREKMGEFAELRDL-LERAIIDTPPVLVRDGGVIA  433

Query  474  --FDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEK  531
              ++  L E R + +     ++   +      GLD    +K+  +A  GYY +++  +  
Sbjct  434  SGYNEELDEWRALADGATDYLERLEVRERERTGLDT---LKVGFNAVHGYYIQISRGQSH  490

Query  532  VLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEP  591
            +   N  +      KN  ++   +L    ++   +K +    +  + +E+ ++   ++E 
Sbjct  491  LAPIN--YMRRQTLKNAERYIIPELKEYEDKVLTSKGKALALEKQLYEELFDLLLPHLEA  548

Query  592  MQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFI  651
            +Q     LA+LD +V+ A       + Y  P  ++K   RI     RH  VE      FI
Sbjct  549  LQQSASALAELDVLVNLAE--RAYTLNYTCPTFIDKPGIRIT--EGRHPVVEQVLNEPFI  604

Query  652  PNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILAR  711
             N +     ++M  IITGPNMGGKSTY+RQT +I LMA IG +VP +  E+  +D I  R
Sbjct  605  ANPLNLSPQRRML-IITGPNMGGKSTYMRQTALIALMAYIGSYVPAQKVEIGPIDRIFTR  663

Query  712  VGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIA  771
            VGA D    G STFM EM ETA+IL +AT+ SL+++DE+GRGTSTYDG  LAWA +E +A
Sbjct  664  VGAADDLASGRSTFMVEMTETANILHNATEYSLVLMDEIGRGTSTYDGLSLAWACAENLA  723

Query  772  TKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVA  831
             KI A  +FATH+ ELT L  ++  V N+H+ AL   +T+  ++ V+ G   +S+G+ VA
Sbjct  724  NKIKALTLFATHYFELTQLPEKMEGVANVHLDALEHGDTIAFMHSVQDGAASKSYGLAVA  783

Query  832  ELANFPKHVIECAKQKALELE  852
             LA  PK VI+ A+QK  ELE
Sbjct  784  ALAGVPKEVIKRARQKLRELE  804


>gi|53805175|ref|YP_113095.1|  DNA mismatch repair protein [Methylococcus capsulatus str. Bath]
Length=854

 Score =  252 bits (644),  Expect = 3e-65
 Identities = 175/561 (31%), Positives = 289/561 (51%), Gaps = 30/561 (5%)

Query  297  SQYMKLDIAAVRALNLF---QGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDK  353
            ++Y+ LD A+ R L L     G  E T     L  LL++  +  G RL+ +W+ QPL D+
Sbjct  264  TEYIGLDAASRRNLELDWHPSGRAEFT-----LLGLLDRTGSAMGGRLLRRWLHQPLRDR  318

Query  354  NRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQ  413
              +  R   +   + D         DLLR   D+ R+A +   ++A  +D   L Q +  
Sbjct  319  TTLMLRQQAIGELLADRRFEAL--HDLLRGVGDVERIAARIALKSARPRDLSTLRQTLKA  376

Query  414  LPNVIQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTL--DMDQVENHEFLVK  471
            LP + + L   E        +  +  LT    D  +  E+++  +  D  Q+     ++ 
Sbjct  377  LPALRETLHGTE--------SALLGELTGRLVDQPELSELLQRAIVDDPPQLIRDGGVIA  428

Query  472  PSFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEK  531
              +   L ELR +  + ++ +           GL     +K+  +   G+Y  +   +  
Sbjct  429  EGYHAELDELRLLSENADRFLAELEEKEREHTGLGA---LKVGYNRVQGFYIELPRSQAD  485

Query  532  VLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEP  591
              R   ++      KN  ++   +L +  ++    +      + A+ + ++ I   ++  
Sbjct  486  --RAPVHYIRRQTLKNAERYVTPELKAFEDKVLSARERALSCEKALYEALLEILGRWLPA  543

Query  592  MQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFI  651
            +Q     LA+LD + + A  ++   + +V P +++    RII    RH  VE      F+
Sbjct  544  LQDCAAGLAELDVLANLAERADR--LNWVAPRLVDAPGIRII--GGRHPVVEQVGGTPFV  599

Query  652  PNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILAR  711
            PND+ F  +++M  +ITGPNMGGKSTY+RQ  +IVLMA IG  VP   AE+  +D I  R
Sbjct  600  PNDLAFGPNRRML-VITGPNMGGKSTYMRQAAIIVLMAHIGSHVPAAEAEIGPIDRIYTR  658

Query  712  VGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIA  771
            +GA D    G STFM EM ETA+IL +AT +SL+++DE+GRGTST+DG  LAWA +E++A
Sbjct  659  IGASDDLAGGRSTFMVEMTETANILNNATAESLVLMDEIGRGTSTFDGLSLAWASAEHLA  718

Query  772  TKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVA  831
             +  A+ +FATH+ ELTALA +   V N+H+ A+   + +  L+ V++G   QS+G+ VA
Sbjct  719  RETRAYTLFATHYFELTALAEECEDVGNVHLDAVEHGDKVVFLHAVREGPASQSYGLQVA  778

Query  832  ELANFPKHVIECAKQKALELE  852
             LA  P+ VI+ A++K  +LE
Sbjct  779  ALAGVPQTVIDNARRKLEQLE  799


>gi|15604167|ref|NP_220682.1|  DNA mismatch repair protein [Rickettsia prowazekii str. Madrid 
E]
Length=891

 Score =  252 bits (644),  Expect = 3e-65
 Identities = 181/629 (28%), Positives = 317/629 (50%), Gaps = 27/629 (4%)

Query  264  QVAVSSLSAVIKFLELLS--DDSNFGQFELTTF-DFSQYMKLDIAAVRALNLFQGSVEDT  320
            +++ S + A+   LE LS     N     +    +F  YM +D +  R L +      + 
Sbjct  249  EISNSQICAIGSILEYLSLTQKQNIPHLPIPKIINFHNYMTIDFSTRRNLEIVTNLQGNL  308

Query  321  TGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDL  380
             GS  +   LN   T QG RL+  ++  PL +  +I  RLN+ E F  +  +   ++E L
Sbjct  309  YGS--VLNTLNHTVTTQGGRLLYHFLSSPLTNIAKINHRLNITEFFYSNLGIVTRIRE-L  365

Query  381  LRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVFVTPL  440
            L+   D+ R   +     ++ +D   +   +     +     +  G +    +   + PL
Sbjct  366  LKNTSDIERCLTRITMNRSSGRDLLSIKYTLETAKTIKGLFSESYGLNLPHFIEKIIKPL  425

Query  441  TDLRSDFSKFQEMIETTLDMDQVENHEF--LVKPSFDPNLSELREIMNDLEKKMQSTLIS  498
                S  ++   +I  ++  D   N     ++K  F P +++L +++N+ +  ++     
Sbjct  426  ----SGDAELYNLIHMSIREDAPNNLNDGGIIKYEFHPKIAQLNDLINNKKLHVEKLKDQ  481

Query  499  AARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTS  558
              ++  ++    +K+  +   G++  +T K    + + K F       N V++T  +L +
Sbjct  482  YRKETRIE---SLKISHNNVLGFFIDITPKNVNKILDPK-FIHRQTTINSVRYTTYELQN  537

Query  559  LneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVP  618
            L  E    +T     +  +  +I          ++ L + L+ LD   +FA++++     
Sbjct  538  LENELVNAQTLVIRLEKELYTDICRKVIEKSSYLKILANSLSGLDVFCNFAYIAD--EYD  595

Query  619  YVRPAILEKGQGRIILKASRHACVEV---QDEIAFIPNDVYFEKDKQMFHIITGPNMGGK  675
            Y +P         I+    RH  VE    +   +F+ ND +  + ++++ +ITGPNM GK
Sbjct  596  YTKPEFTNDLSFDIV--KGRHPVVEAALRKTSKSFVYNDCHLSEAERIW-LITGPNMAGK  652

Query  676  STYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASI  735
            STY+RQ  +I ++AQIG FVP +SA++ +VD I +R+GA D  +KG STFMAEMLET++I
Sbjct  653  STYLRQNAIITIIAQIGSFVPAKSAKIGVVDKIFSRIGAADDLIKGQSTFMAEMLETSAI  712

Query  736  LRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIP  795
            L  +TK+SLII+DE+GRGTSTYDG  +AW++ EYI  K+   C+FATH+HELT + N +P
Sbjct  713  LAQSTKNSLIILDEVGRGTSTYDGVSIAWSVLEYIHDKLQCRCLFATHYHELTVMKNFLP  772

Query  796  TVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEEFQ  855
             + N  +    + + +  L+ +  G  ++S+G+HVA LA  P  VI  A Q  L   +F+
Sbjct  773  ALQNYTIAIEESGKDILFLHNIILGASNKSYGLHVAALAGLPTSVINRAAQILL---KFE  829

Query  856  YIGESQGYDIMEPAAKKCYLEREQGEKII  884
             I  S+  +I+  A+    L   + EK I
Sbjct  830  KISISKEKNILSNASNNLSLFNFEHEKPI  858


>gi|77164436|ref|YP_342961.1|  DNA mismatch repair protein [Nitrosococcus oceani ATCC 19707]
Length=863

 Score =  252 bits (644),  Expect = 3e-65
 Identities = 183/560 (32%), Positives = 292/560 (52%), Gaps = 35/560 (6%)

Query  302  LDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLN  361
            LD +  R L L + S+   +G  +L A+L+   T  G RL+ +++ +PL D+  +++R  
Sbjct  270  LDPSTRRNLEL-EESLSGDSGRNTLIAVLDHTATAMGSRLLRRYLHRPLRDQTLLKQRQQ  328

Query  362  LVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQAL  421
             +   +E   L   LQ  LLR   D+ R+  +   ++A  +D  +  Q +  LP + ++L
Sbjct  329  ALATLLEGG-LSDVLQT-LLRGIGDIERILSRVALRSARPRDLVQFRQALGLLPKIQESL  386

Query  422  EKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPS------FD  475
             +       LLL         L+ D   F  + E  L     EN   L++        FD
Sbjct  387  LQLN--RDSLLLQ-------SLQEDLGPFPNLHEL-LQRAICENPPVLIRDGGVIALGFD  436

Query  476  PNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRN  535
              L ELR +  +  + +   L    R+    P   +K+  +   GYY  +T    +  + 
Sbjct  437  SELDELRHLSGNAGQFLVK-LEQRERERTKIP--TLKVGYNKVHGYYLEIT--RAQAHQA  491

Query  536  NKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTL  595
              ++      K   ++   +L    ++    +      + A+ +E++     ++EP+  L
Sbjct  492  PPDYIRRQTLKGAERYITPELKGFEDQVLSARERALAREKALYEELLE---QFMEPLPAL  548

Query  596  N---DVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIP  652
                + LA+LD + + A       + YV P + +  Q  I ++  RH  VE   E  F+P
Sbjct  549  RACANALAELDVLHNLAE--RAKTLEYVAPLLSD--QPGIFIERGRHPVVEQTLEDPFVP  604

Query  653  NDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARV  712
            ND+   + ++M  IITGPNMGGKSTY+RQT +IVL+A IG FVP   A +  +D I  R+
Sbjct  605  NDLTLHEARRML-IITGPNMGGKSTYMRQTALIVLLAHIGSFVPARRAVIGPIDRIFTRI  663

Query  713  GAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIAT  772
            GA D    G STFM EM ETA+IL +AT+ SL+++DE+GRGTST+DG  LAWA+  ++A 
Sbjct  664  GAADDLAGGRSTFMVEMTETANILHNATEHSLVLLDEVGRGTSTFDGLSLAWAVVSHLAN  723

Query  773  KIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAE  832
            K+ +  +FATH+ ELT L   +P V NLH+TA   +E +  L+ VK+G   QS+G+ VA 
Sbjct  724  KVRSLTLFATHYFELTTLPECLPGVVNLHLTATEHKEHIVFLHAVKEGPASQSYGLQVAA  783

Query  833  LANFPKHVIECAKQKALELE  852
            LA  P+ +I  A+Q+ +ELE
Sbjct  784  LAGVPQEIIAQARQQLMELE  803


>gi|62185403|ref|YP_220188.1|  DNA mismatch repair protein [Chlamydophila abortus S26/3]
Length=826

 Score =  252 bits (644),  Expect = 3e-65
 Identities = 179/560 (31%), Positives = 283/560 (50%), Gaps = 23/560 (4%)

Query  298  QYMKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIE  357
            +++ +D A+   L L    + D  G  SL  ++ +  TP G RL+   +  P  D+  I 
Sbjct  266  KHLLIDTASQVNLELLT-PIHDPQGKSSLLHVMERTSTPMGGRLLRNTLVNPFYDQKEIL  324

Query  358  ERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGIN---QL  414
             R + VE  ++ +ELR+ L+  LL +  DL RL  K     A  +D   L   +N   ++
Sbjct  325  LRQDAVEFLLDRSELRKNLKS-LLSQVRDLERLTTKITTSLAGPKDIGMLRDSLNASIRV  383

Query  415  PNVIQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSF  474
              V+  L   +    +  L + +T L++L S     +  +  +      +NH        
Sbjct  384  CEVLSPLPLPKFFQGRFTLPIGLTSLSELLSRALLGELPLRISEGNIFCDNHH-------  436

Query  475  DPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLR  534
             P+L  LR      ++ +     +  +  G+   K++K+  S   GYY  V+     +L 
Sbjct  437  -PDLQRLRYTKEHSKEWLWQYQETIRQQTGV---KKLKVCYSQALGYYIEVSSDFAPLLP  492

Query  535  NNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQT  594
              K F     + +  +FT  KL    ++      + +  +  + K++        E + +
Sbjct  493  --KEFIRRQSRLHAERFTTEKLQEFQDDMLNISDKLQTLETQLFKDLCAQILQQREEILS  550

Query  595  LNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPND  654
            L+ V+A +D ++S + ++  A   Y RP I++      I          + D+  FIPND
Sbjct  551  LSQVIADIDYILSLSDLA--AEYNYCRP-IVDTSDSLSISGGIHPVAQTLLDKGTFIPND  607

Query  655  VYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGA  714
            +     +    +ITGPNM GKSTYIRQ  ++V+MAQ+G F+P +SA + ++D I  R+GA
Sbjct  608  IKMHSTRTRMILITGPNMAGKSTYIRQIALLVIMAQMGSFIPAKSAHIGMIDKIFTRIGA  667

Query  715  GDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKI  774
            GD+  KG+STFM EM ETA+IL +AT  SL+I+DE+GRGTSTYDG  +A ++ EY+    
Sbjct  668  GDNLSKGMSTFMVEMAETANILHNATDRSLVILDEVGRGTSTYDGLAIAQSVVEYLLFTE  727

Query  775  G--AFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAE  832
            G  A  +FATH+ ELT L N  P V N H +          LY++ KG   +SFGIHVA+
Sbjct  728  GKKAKTLFATHYKELTDLENHCPHVENFHASVKENGGQPVFLYEILKGHSQKSFGIHVAK  787

Query  833  LANFPKHVIECAKQKALELE  852
            LA FP  VI  A+Q   +LE
Sbjct  788  LAGFPLCVISRAQQILRQLE  807


>gi|89092115|ref|ZP_01165070.1|  DNA mismatch repair protein [Oceanospirillum sp. MED92]
Length=854

 Score =  252 bits (644),  Expect = 3e-65
 Identities = 165/540 (30%), Positives = 283/540 (52%), Gaps = 30/540 (5%)

Query  325  SLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRF  384
            +LA +++KC+TP G RL+ +W+ +P+ D+  +  R   ++    + +  +  +   L+  
Sbjct  289  TLAKVIDKCRTPMGSRLLRRWLHRPIQDRATLLARQASIQWLQNNYKFEEIQKP--LKNI  346

Query  385  PDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVFVTPLTDLR  444
             D+ R+  +   ++A  +D  RL   +  LP +           Q  L       +++L 
Sbjct  347  GDIERILARIALRSARPRDLERLKSALASLPEL-----------QSQLKTTDAPLISELA  395

Query  445  SDFSKFQEMIETTLDMDQVENHEFLVKPS------FDPNLSELREIMNDLEKKMQSTLIS  498
               S+F E+ +  L    ++N   +++        FD  L ELR I  +    +      
Sbjct  396  IQISQFPELSDLLLKAI-IDNPPVVIRDGGVIAEGFDEELDELRGISENAGAYLIELETR  454

Query  499  AARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTS  558
                 G+     +K+  +   GY+  +   +   L     +      KN  ++   +L  
Sbjct  455  ERERTGI---ATLKVGYNRVHGYFIEIGKAQNAELP--AEYIRRQTLKNAERYITPELKE  509

Query  559  LneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVP  618
              ++    K+     + A+ ++++   +  + P+Q  +  +A+LD + + A     + + 
Sbjct  510  FEDKALSAKSRALAREKALYEQLLETLAAELSPLQDSSAAIAELDVLNNLAE--RASTLD  567

Query  619  YVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTY  678
            YV P + E+ Q  I ++  RH  VE   +  F+ ND+  + +++M  IITGPNMGGKSTY
Sbjct  568  YVPPTLTEEPQ--IKIQRGRHPVVETVLDDPFVANDLDLDNERKML-IITGPNMGGKSTY  624

Query  679  IRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRS  738
            +RQ  +I L+A IG +VP  +A + IVD I  R+G+ D    G STFM EM ETA+I+ +
Sbjct  625  MRQAALITLLAHIGSYVPASAATIGIVDKIFTRMGSSDDLAGGRSTFMVEMTETANIMHN  684

Query  739  ATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPTVN  798
            AT  SL+++DE+GRGTST+DG  LAWA +E +A +  AF +FATH+ ELT+L +Q   V 
Sbjct  685  ATARSLVLMDEVGRGTSTFDGLSLAWACAENLARETNAFTLFATHYFELTSLPDQAANVF  744

Query  799  NLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEEFQYIG  858
            N+H+TA+   + +  L++VK G   QS+G+ VA+LA  P +VIE AK K  +LE+   +G
Sbjct  745  NVHLTAVEHNDHIVFLHEVKDGPASQSYGLQVAQLAGVPLNVIEQAKAKLNQLEQDVAVG  804


>gi|62514426|ref|ZP_00385929.1|  COG0249: Mismatch repair ATPase (MutS family) [Lactobacillus 
casei ATCC 334]
Length=857

 Score =  252 bits (644),  Expect = 3e-65
 Identities = 180/557 (32%), Positives = 286/557 (51%), Gaps = 17/557 (3%)

Query  297  SQYMKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRI  356
            S Y+++D  A   L++ Q S     G  +L +LL+  KT  G RL+ QW+ +PL+D + I
Sbjct  251  SAYLEMDQDARSNLDILQNSRTGRKGD-TLLSLLDSTKTAMGGRLLKQWLDRPLLDIDAI  309

Query  357  EERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPN  416
              R N V+  ++    R  LQE L + + DL RLA +      N +D  +L   ++Q+P 
Sbjct  310  SVRQNQVQDLLDHFFERSELQERLTKVY-DLERLAGRVAFGTVNGRDLIQLQTSLDQIPA  368

Query  417  VIQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDP  476
            +   L K +    K L +  + P++D+       +  IE    +   +    L+   ++ 
Sbjct  369  IQDVLGKLDDGSFKALRSK-MDPVSDVAG---LIRRAIEPEPPISVTDGG--LILRGYNQ  422

Query  477  NLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNN  536
             L   R+ M + ++ +     S  +  G+     +K+  +  FGY+  VT      +   
Sbjct  423  KLDSYRDAMKNSKQWIAELEASERKATGIHT---LKIRYNKVFGYFIEVTKSNLDKIPEG  479

Query  537  KNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLN  596
            + +       N  +F   +L        + +      +  + ++I +     ++ +Q L 
Sbjct  480  R-YERKQTLTNAERFITPELKEKETLILEAQESSTALEYDLFQDIRDKVKAQIKRLQALA  538

Query  597  DVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVE-VQDEIAFIPNDV  655
              ++ LD + SFA V+  +   YVRP  +  G   I +K  RH  VE V    ++IPNDV
Sbjct  539  AQISSLDVLQSFATVAENSH--YVRPT-MHAGTHDINVKGGRHPVVEHVLGRDSYIPNDV  595

Query  656  YFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAG  715
                D  M  +ITGPNM GKSTY+RQ  +IV+MAQ G FVP + A++ I D I  R+GA 
Sbjct  596  IMNHDTDML-LITGPNMSGKSTYMRQLALIVIMAQAGSFVPADVADLPIFDQIFTRIGAA  654

Query  716  DSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIG  775
            D    G STFM EMLE  + L  AT  SLI+ DE+GRGT+TYDG  LA AI E++   + 
Sbjct  655  DDLANGESTFMVEMLEANAALSHATASSLILFDEIGRGTATYDGMALAQAIIEFLHDHVH  714

Query  776  AFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELAN  835
            A  +F+TH+HELT+L++ +  + N+HV A+     L  L+++  G  D+S+GIHVA+LA 
Sbjct  715  AKTLFSTHYHELTSLSDSLAKLKNVHVGAVEEHGNLVFLHKMMPGPADKSYGIHVAKLAG  774

Query  836  FPKHVIECAKQKALELE  852
             P  ++  A     +LE
Sbjct  775  LPADLLARADTILKQLE  791


>gi|54297717|ref|YP_124086.1|  DNA mismatch repair protein [Legionella pneumophila str. Paris]
Length=846

 Score =  252 bits (643),  Expect = 5e-65
 Identities = 173/609 (28%), Positives = 304/609 (49%), Gaps = 42/609 (6%)

Query  260  EMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLFQGSVED  319
            E     A+ +  A++ +L+     S      LT      Y++LD +  + L LF+     
Sbjct  221  EQNYPTALIAAGALLAYLKTTQKQSLPHLTTLTLEQSEDYLQLDASTQKHLELFENI--H  278

Query  320  TTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFV---EDAELRQTL  376
              G   L ++L+K     G RL+ +W+ +PL     I+ R   ++  +   +D  L Q  
Sbjct  279  GGGEHCLLSILDKTACAMGSRLLKRWLGKPLKQHAIIQTRQQAIKEIIFLQQDVSLHQ--  336

Query  377  QEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVF  436
               L+++  D+ R+  +   ++A  +D   L Q +  LP +   L++++        ++ 
Sbjct  337  ---LIKQCADVERIVSRIALKSARPRDLVSLLQTLTLLPAIHDELQENK--------SLL  385

Query  437  VTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVK------PSFDPNLSELREIMNDLEK  490
            +  +    S     Q+++ET +    ++N   L++      P FD  L ELR + ++  +
Sbjct  386  INEIKKEISPLPLLQQLLETAI----IDNPPMLIRDGGVIAPGFDEELDELRNLSSNAHE  441

Query  491  KMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVK  550
             +           GL     +KL  ++  G+Y  ++  + +      +F      KN  +
Sbjct  442  TLVKLEQEEKNRTGLST---LKLGYNSVQGFYIELS--KAQAQNAPPHFHRKQTLKNVER  496

Query  551  FTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAH  610
            +   +L    ++    +++    +  +   ++     Y+  +  L   LAQLD +V+ A 
Sbjct  497  YITPELKLFEDKVLSAQSKALAREKWLYDNLLEEIQQYIPELSDLAKSLAQLDVLVTLAE  556

Query  611  VSNGAP--VPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYFEKDKQMFHIIT  668
             +       P + P      +  I+++A RH  +E   +  FI ND+  + ++ M  +IT
Sbjct  557  RAQSLNWNCPNLVP------ESGIMIQAGRHPVIEPLLQERFIANDLELKPNQNML-LIT  609

Query  669  GPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAE  728
            GPNMGGKSTY+RQT +IVL++ IG FVP +   +  +D I  R+GA D    G STFM E
Sbjct  610  GPNMGGKSTYMRQTALIVLLSHIGSFVPADEVTLGPLDRIFTRIGASDDLSSGRSTFMVE  669

Query  729  MLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELT  788
            M ETA ILR AT  SL++IDE+GRGTSTYDG  LA+A   ++A+ I A+ +F+TH+ ELT
Sbjct  670  MTETAQILRQATSQSLVLIDEIGRGTSTYDGMALAYASCAFLASTIKAYTLFSTHYLELT  729

Query  789  ALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKA  848
             L  +   + N+H+ A      +  LY+V++G  ++S+G+ VAELA  PK V++ A +  
Sbjct  730  ELPKEFSCIRNVHLQASIKTGQIVFLYRVEEGCANRSYGLEVAELAGIPKEVLKLAHEHL  789

Query  849  LELEEFQYI  857
             ++++ Q I
Sbjct  790  NQIQDTQSI  798


>gi|86610157|ref|YP_478919.1|  DNA mismatch repair protein MutS [Synechococcus sp. JA-2-3B'a(2-13)]
Length=884

 Score =  252 bits (643),  Expect = 5e-65
 Identities = 223/769 (28%), Positives = 360/769 (46%), Gaps = 65/769 (8%)

Query  138  NNDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPK  197
            NN ++A + + G K +      + G+ Y D    +  +C+    +Q   LE  L ++ P 
Sbjct  126  NNYLAAVVRLKGSKQAPC----RWGLAYADISTGEFWVCQSEGQEQ---LEQELARLQPA  178

Query  198  ECVLPGGETAGDMGKLRQIIQRGGILI------TERKKADFSTKDIYQDLNRLLKGKKGE  251
            E +LP  E  G +G +R    +  + +      T R    F      ++L +    +  E
Sbjct  179  EVLLPTEEGLG-LGLIRPGDPQKPLGLPNQYAYTLRPAEPFELAVARENLMQTYGLRSLE  237

Query  252  QMNSAVLPEMENQVAVSSLSAVIKFLE-------------LLSDDSNFGQFELT---TFD  295
             +    LP     +AV +   ++ +LE             LL      G   L    T+ 
Sbjct  238  GLGCEGLP-----LAVRAAGGLLHYLEETHSPQRCVAPKTLLQPSPQGGHPLLPPPRTYQ  292

Query  296  FSQYMKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNR  355
             + Y+ LD    R L L Q ++ +     SL  +L+  +T  G R + +W+ QPL D  +
Sbjct  293  LTDYLILDAQTRRNLELTQ-TIREGAFVGSLLWVLDHSRTAMGGRTLRRWLLQPLRDSEQ  351

Query  356  IEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLP  415
            I  R + ++  +E+  LR  L   LL    DL RLA +     AN ++   L   + +LP
Sbjct  352  IRLRQDTIQELLENPSLRARLGS-LLDSLYDLERLANRVGSGTANPRELVALGSSLGKLP  410

Query  416  NVIQALEKHEGKHQKLLLAVFVTP-LTDLRSDFSKFQEMIETTL--DMDQVENHEFLVKP  472
             + + +   E K   L     V P L DL          IE TL      +     L++P
Sbjct  411  QLAELVG--EAKTPLLQSLQQVDPALVDLG-------RRIEHTLLPSPPPILTEGGLIRP  461

Query  473  SFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKV  532
              DP L  LR+ +   +++  + L  + RD    P   +K+  +  FGYY  ++    K 
Sbjct  462  GVDPELDRLRQQVEQ-DRQWVAQLEKSERDRTGIP--TLKVGFNKAFGYYLSIS--RAKA  516

Query  533  LRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPM  592
             +  K +       N  +F   +L          +T+  + +  +  ++   +    E +
Sbjct  517  HQVPKEYIRKQTLTNEERFITPELKEKEARILTAQTDINQREYELFVQLRQEAGSRAEAI  576

Query  593  QTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQ-DEIAFI  651
            + +   LA +DA+   A V+      Y RP +      R+I++  RH  VE    +  F+
Sbjct  577  RQVAQTLAAVDALFGLAEVA--VQQGYTRPLLTT--DRRLIIEEGRHPVVEKSLPQGLFV  632

Query  652  PNDVYFEKDKQM-FHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILA  710
            PN V           ++TGPNM GKSTY+RQ G+I ++AQ+G FVP   AE+ + D +  
Sbjct  633  PNSVQLGSPHGPDLIVLTGPNMSGKSTYLRQIGLIQILAQMGSFVPARRAELGLCDRVFT  692

Query  711  RVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYI  770
            R+GA D    G STFM EM ETA+IL  A + SL+++DE+GRGT+T+DG  +AWA++EY+
Sbjct  693  RIGAVDDLATGQSTFMVEMNETANILNHAGERSLVLLDEIGRGTATFDGLSIAWAVAEYL  752

Query  771  ATKIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHV  830
            AT++ A  +FATH+HEL  L   +P V N  V     ++ +  L+QV+ G  D+S+GI V
Sbjct  753  ATQVRARTVFATHYHELNQLETLLPNVANFQVVVKELQDRIIFLHQVQPGGADRSYGIEV  812

Query  831  AELANFPKHVIECAKQKALELEEFQYIG---ESQGYDIMEPAAKKCYLE  876
              +A  P+ VI+ A+Q    +E+   IG    +QG    +PA K C  E
Sbjct  813  GRMAGLPQPVIQRAEQVLALVEKHSRIGLGLRNQGKS--QPAQKNCKKE  859


>gi|85859743|ref|YP_461945.1|  DNA mismatch repair protein [Syntrophus aciditrophicus SB]
Length=880

 Score =  252 bits (643),  Expect = 5e-65
 Identities = 202/701 (28%), Positives = 335/701 (47%), Gaps = 33/701 (4%)

Query  158  QRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQII  217
            +  +G+ ++D    +  + +F D   F   E  L  +  +E ++P G  +G  G L+   
Sbjct  142  EHHIGLAFLDISTGEFRVSDFQDIRFF---ETELAALDFREIMVPQG--SGKQGFLKAFA  196

Query  218  QRGGILITERKKADFSTKDIYQDLNRLLKGKKGEQMNSAVLPEMENQVAVSSLSAVIKFL  277
             R      +    ++  ++    L RL    + E +    L +      + +  AV++++
Sbjct  197  GRENSCRLDEFPDEYFDRE--SALGRLQDYIRKEDLEDLGLKDCP--AVIGAAGAVLRYV  252

Query  278  ELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQ  337
            E            L  +  ++Y+ LD  A R L LF+ +++D   + SL ++L++  T  
Sbjct  253  EETQKSRLTHINRLQWYSAAEYLVLDETAKRNLELFK-TIQDNRTAGSLFSVLDETVTAM  311

Query  338  GQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQ  397
            G R +  W+  PL+D  +I+ RL  V    E+   R+ L++ +L    D+ RLA +    
Sbjct  312  GGRRLRWWLNYPLVDPEKIKARLAAVAEIRENHLFRENLRK-VLSEVYDMERLAGRIALG  370

Query  398  AANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETT  457
             AN +D   L Q +  LP +   L            +  +  + D   +     ++IE  
Sbjct  371  VANGRDLIALKQSLKNLPVLKNLLADSN--------SFMLDRIQDGIDELPDLYDLIEKA  422

Query  458  L-DMDQVENHEF-LVKPSFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDS  515
            + D   V   E  ++K  +D     L  +  D  + + +      +  G+     +K+  
Sbjct  423  ICDSPPVTLREGGIIKEGYDEERDRLFFMTRDGRRWIAALEEKERKRTGIS---SLKVGF  479

Query  516  SAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQD  575
            +  FGYY  ++ K    L   +++       N  ++ N +L          +T   E + 
Sbjct  480  NNVFGYYIEIS-KANSALAP-EDYVRKQTLVNAERYINQELKEYEATVLNAETRCREREY  537

Query  576  AIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILK  635
             +  ++   ++  +  MQ    +LA LDA+ S A V+      Y  P +    + RI + 
Sbjct  538  DLFMQVRECAAAEITRMQATATLLADLDALASLAEVAE--KYNYCCPVV--DLEDRIEID  593

Query  636  ASRHACVEVQD-EIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCF  694
              RH  VE       F+PNDV  + D+  F +ITGPNM GKSTYIRQ  +IVLMAQ+G F
Sbjct  594  VGRHPVVERMSLRDGFVPNDVVLDTDENRFLVITGPNMAGKSTYIRQVALIVLMAQMGSF  653

Query  695  VPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGT  754
            VP   A + +VD I  R+GA DS ++G STFM EM E A IL  AT  SL+I+DE+GRGT
Sbjct  654  VPSSRARIGVVDRIFTRIGAADSLIRGQSTFMVEMNEVAQILCHATGRSLVILDEVGRGT  713

Query  755  STYDGFGLAWAISEYIATK--IGAFCMFATHFHELTALANQIPTVNNLHVtaltteetlt  812
            ST+DG  +AWA++EY+  K  IGA  +FATH+H+LT LA       N ++      + + 
Sbjct  714  STFDGLSIAWAVAEYLHDKNWIGARTLFATHYHQLTELAVAGTGYRNYNIAVKEWGDRII  773

Query  813  MLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEE  853
             L ++  G  ++S+GI VA +A  P+ VI  A++    LE+
Sbjct  774  FLRKIVPGGTNRSYGIQVARIAGVPEEVIVRAREILDNLEK  814


>gi|51595128|ref|YP_069319.1|  DNA mismatch repair protein [Yersinia pseudotuberculosis IP 32953]
 gi|77631753|ref|ZP_00794339.1|  COG0249: Mismatch repair ATPase (MutS family) [Yersinia pseudotuberculosis 
IP 31758]
Length=851

 Score =  251 bits (642),  Expect = 6e-65
 Identities = 181/560 (32%), Positives = 291/560 (51%), Gaps = 40/560 (7%)

Query  302  LDIAAVRALNLFQ---GSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEE  358
            +D A  R L L Q   G  E+T     LAA+L+   TP G R++ +W+  P+ D   + +
Sbjct  269  MDAATRRNLELTQNLSGGSENT-----LAAILDCSVTPMGSRMLKRWLHMPIRDIRVLTD  323

Query  359  RLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVI  418
            R   +    + A   QT     LR+  DL R+  +   + A  +D  R+     QLP + 
Sbjct  324  RQQAIGGLQDIAAELQTP----LRQVGDLERILARLALRTARPRDLARMRHAFQQLPEIH  379

Query  419  QALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPS-----  473
            + L+  +  H + LL+            F + Q+++E  +    VE    LV+       
Sbjct  380  RLLQPIDVPHVQNLLSQV--------GQFDELQDLLERAI----VETPPVLVRDGGVIAS  427

Query  474  -FDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKV  532
             ++  L E R + +     +    I     LGLD    +K+  +   GYY +V+  +  +
Sbjct  428  GYNAELDEWRALADGATDYLDRLEIREREKLGLDT---LKVGFNGVHGYYIQVSRGQSHL  484

Query  533  LRNNKNFSTVDIQKNGVKFTNSKLTSLneeytknkteyeeAQDAIVKEIVNISSGYVEPM  592
            +  +  +      KN  ++   +L    ++   +K +    +  + +EI ++   ++  +
Sbjct  485  VPIH--YVRRQTLKNAERYIIPELKEYEDKVLTSKGKALAIEKGLYEEIFDLLLPHLPEL  542

Query  593  QTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIP  652
            Q   + LA+LD + + A       + Y  P + +K   +I+    RH  VE   +  FI 
Sbjct  543  QLSANALAELDVLANLAE--RAETLNYSCPTLSDKPGIKIM--GGRHPVVEQVLKEPFIS  598

Query  653  NDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARV  712
            N +     ++M  IITGPNMGGKSTY+RQT +IVL+A +G +VP + A +  +D I  RV
Sbjct  599  NPLTLSPQRRML-IITGPNMGGKSTYMRQTALIVLLAHLGSYVPADQATIGPIDRIFTRV  657

Query  713  GAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIAT  772
            GA D    G STFM EM ETA+IL +AT+ SL+++DE+GRGTSTYDG  LAWA +E +A+
Sbjct  658  GAADDLASGRSTFMVEMTETANILHNATEQSLVLMDEIGRGTSTYDGLSLAWACAENLAS  717

Query  773  KIGAFCMFATHFHELTALANQIPTVNNLHVtaltteetltMLYQVKKGVCDQSFGIHVAE  832
            +I A  +FATH+ ELT L  ++  V N+H+ AL   ET+  ++ V++G   +S+G+ VA 
Sbjct  718  RIKAMTLFATHYFELTTLPEKMEGVANVHLDALEHGETIAFMHSVQEGAASKSYGLAVAA  777

Query  833  LANFPKHVIECAKQKALELE  852
            LA  P+ VI+ A+QK  ELE
Sbjct  778  LAGVPRDVIKRARQKLKELE  797






  Database: NCBI Protein Reference Sequences
    Posted date:  Apr 15, 2006  3:09 AM
  Number of letters in database: 815,640,044
  Number of sequences in database:  2,261,996
Lambda     K      H
   0.319    0.135    0.378 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 2261996
Number of Hits to DB: 154601387
Number of extensions: 6098234
Number of successful extensions: 17593
Number of sequences better than 10: 127
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 17436
Number of HSP's successfully gapped: 137
Length of query: 934
Length of database: 815640044
Length adjustment: 137
Effective length of query: 797
Effective length of database: 815640044
Effective search space: 650065115068
Effective search space used: 403080033824
T: 11
A: 40
X1: 16 (7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 80 (35.4 bits)